parsl 2024.1.1__py3-none-any.whl → 2024.1.15__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- parsl/addresses.py +3 -2
- parsl/dataflow/dflow.py +5 -9
- parsl/executors/high_throughput/executor.py +19 -16
- parsl/executors/workqueue/executor.py +1 -1
- parsl/jobs/job_status_poller.py +7 -6
- parsl/providers/errors.py +14 -7
- parsl/tests/conftest.py +59 -10
- parsl/tests/test_checkpointing/test_python_checkpoint_1.py +12 -32
- parsl/tests/test_checkpointing/test_python_checkpoint_2.py +25 -28
- parsl/tests/test_providers/test_submiterror_deprecation.py +21 -0
- parsl/tests/test_radical/test_mpi_funcs.py +3 -2
- parsl/tests/test_staging/__init__.py +7 -0
- parsl/tests/test_staging/test_elaborate_noop_file.py +30 -38
- parsl/tests/test_staging/test_staging_https.py +60 -76
- parsl/tests/test_utils/__init__.py +0 -0
- parsl/tests/test_utils/test_representation_mixin.py +68 -0
- parsl/utils.py +14 -9
- parsl/version.py +1 -1
- {parsl-2024.1.1.dist-info → parsl-2024.1.15.dist-info}/METADATA +2 -2
- {parsl-2024.1.1.dist-info → parsl-2024.1.15.dist-info}/RECORD +27 -25
- parsl/tests/test_staging/test_staging_https_in_task.py +0 -34
- {parsl-2024.1.1.data → parsl-2024.1.15.data}/scripts/exec_parsl_function.py +0 -0
- {parsl-2024.1.1.data → parsl-2024.1.15.data}/scripts/parsl_coprocess.py +0 -0
- {parsl-2024.1.1.data → parsl-2024.1.15.data}/scripts/process_worker_pool.py +0 -0
- {parsl-2024.1.1.dist-info → parsl-2024.1.15.dist-info}/LICENSE +0 -0
- {parsl-2024.1.1.dist-info → parsl-2024.1.15.dist-info}/WHEEL +0 -0
- {parsl-2024.1.1.dist-info → parsl-2024.1.15.dist-info}/entry_points.txt +0 -0
- {parsl-2024.1.1.dist-info → parsl-2024.1.15.dist-info}/top_level.txt +0 -0
parsl/addresses.py
CHANGED
@@ -72,8 +72,9 @@ def address_by_hostname() -> str:
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"""
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logger.debug("Finding address by using local hostname")
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addr = platform.node()
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-
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-
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+
ip_addr = socket.gethostbyname(addr)
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logger.debug("Address found: {}".format(ip_addr))
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return ip_addr
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@typeguard.typechecked
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parsl/dataflow/dflow.py
CHANGED
@@ -177,7 +177,9 @@ class DataFlowKernel:
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# this must be set before executors are added since add_executors calls
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# job_status_poller.add_executors.
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-
self.job_status_poller = JobStatusPoller(self
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+
self.job_status_poller = JobStatusPoller(strategy=self.config.strategy,
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max_idletime=self.config.max_idletime,
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dfk=self)
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self.executors: Dict[str, ParslExecutor] = {}
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@@ -526,9 +528,7 @@ class DataFlowKernel:
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# or do nothing?
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if self.checkpoint_mode == 'task_exit':
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self.checkpoint(tasks=[task_record])
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-
elif self.checkpoint_mode
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self.checkpoint_mode == 'periodic' or \
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self.checkpoint_mode == 'dfk_exit':
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elif self.checkpoint_mode in ('manual', 'periodic', 'dfk_exit'):
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with self.checkpoint_lock:
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self.checkpointable_tasks.append(task_record)
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elif self.checkpoint_mode is None:
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@@ -1298,11 +1298,7 @@ class DataFlowKernel:
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hashsum = task_record['hashsum']
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if not hashsum:
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continue
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t = {'hash': hashsum,
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'exception': None,
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'result': None}
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-
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t['result'] = app_fu.result()
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t = {'hash': hashsum, 'exception': None, 'result': app_fu.result()}
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# We are using pickle here since pickle dumps to a file in 'ab'
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# mode behave like a incremental log.
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@@ -205,7 +205,6 @@ class HighThroughputExecutor(BlockProviderExecutor, RepresentationMixin):
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BlockProviderExecutor.__init__(self, provider=provider, block_error_handler=block_error_handler)
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self.label = label
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-
self.launch_cmd = launch_cmd
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self.worker_debug = worker_debug
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self.storage_access = storage_access
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self.working_dir = working_dir
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@@ -259,21 +258,25 @@ class HighThroughputExecutor(BlockProviderExecutor, RepresentationMixin):
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self.cpu_affinity = cpu_affinity
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if not launch_cmd:
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-
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launch_cmd = (
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"process_worker_pool.py {debug} {max_workers} "
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"-a {addresses} "
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"-p {prefetch_capacity} "
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"-c {cores_per_worker} "
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"-m {mem_per_worker} "
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"--poll {poll_period} "
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"--task_port={task_port} "
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"--result_port={result_port} "
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"--logdir={logdir} "
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"--block_id={{block_id}} "
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"--hb_period={heartbeat_period} "
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"{address_probe_timeout_string} "
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"--hb_threshold={heartbeat_threshold} "
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"--cpu-affinity {cpu_affinity} "
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"--available-accelerators {accelerators}"
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)
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self.launch_cmd = launch_cmd
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radio_mode = "htex"
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@@ -849,7 +849,7 @@ def _work_queue_submit_wait(*,
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break
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# Submit tasks
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while task_queue.qsize() > 0 and not should_stop.value:
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while task_queue.qsize() > 0 or q.empty() and not should_stop.value:
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# Obtain task from task_queue
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try:
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task = task_queue.get(timeout=1)
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parsl/jobs/job_status_poller.py
CHANGED
@@ -2,7 +2,7 @@ import logging
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import parsl
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import time
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import zmq
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from typing import Dict, List, Sequence
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from typing import Dict, List, Sequence, Optional
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from parsl.jobs.states import JobStatus, JobState
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from parsl.jobs.strategy import Strategy
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@@ -17,7 +17,7 @@ logger = logging.getLogger(__name__)
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class PollItem:
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-
def __init__(self, executor: BlockProviderExecutor, dfk: "parsl.dataflow.dflow.DataFlowKernel"):
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+
def __init__(self, executor: BlockProviderExecutor, dfk: Optional["parsl.dataflow.dflow.DataFlowKernel"] = None):
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self._executor = executor
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self._dfk = dfk
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self._interval = executor.status_polling_interval
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@@ -26,7 +26,7 @@ class PollItem:
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# Create a ZMQ channel to send poll status to monitoring
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self.monitoring_enabled = False
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-
if self._dfk.monitoring is not None:
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if self._dfk and self._dfk.monitoring is not None:
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self.monitoring_enabled = True
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hub_address = self._dfk.hub_address
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hub_port = self._dfk.hub_interchange_port
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class JobStatusPoller(Timer):
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-
def __init__(self,
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def __init__(self, strategy: Optional[str] = None, max_idletime: float = 0.0,
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dfk: Optional["parsl.dataflow.dflow.DataFlowKernel"] = None) -> None:
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self._poll_items = [] # type: List[PollItem]
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self.dfk = dfk
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self._strategy = Strategy(strategy=
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max_idletime=
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self._strategy = Strategy(strategy=strategy,
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max_idletime=max_idletime)
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super().__init__(self.poll, interval=5, name="JobStatusPoller")
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def poll(self) -> None:
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parsl/providers/errors.py
CHANGED
@@ -1,5 +1,7 @@
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from parsl.errors import ParslError
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import warnings
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class ExecutionProviderException(ParslError):
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""" Base class for all exceptions
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class SubmitException(ExecutionProviderException):
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-
'''Raised by the submit() method of a provider if there is an error in launching a
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'''Raised by the submit() method of a provider if there is an error in launching a job.
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'''
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def __init__(self,
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self.
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def __init__(self, job_name, message, stdout=None, stderr=None):
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self.job_name = job_name
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self.message = message
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self.stdout = stdout
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self.stderr = stderr
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@property
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def task_name(self) -> str:
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warnings.warn("task_name is deprecated; use .job_name instead. This will be removed after 2024-06.", DeprecationWarning)
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return self.job_name
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def __str__(self):
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# TODO: make this more user-friendly
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-
return "Cannot launch
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return "Cannot launch job {0}: {1}; stdout={2}, stderr={3}".format(self.job_name,
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self.message,
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self.stdout,
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self.stderr)
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parsl/tests/conftest.py
CHANGED
@@ -3,6 +3,8 @@ import itertools
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import logging
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import os
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import pathlib
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import re
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import shutil
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import time
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import types
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import signal
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@@ -20,6 +22,7 @@ import _pytest.runner as runner
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import parsl
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from parsl.dataflow.dflow import DataFlowKernelLoader
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from parsl.utils import RepresentationMixin
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logger = logging.getLogger(__name__)
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@@ -44,17 +47,46 @@ def pytest_sessionstart(session):
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@pytest.fixture(scope="session")
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def tmpd_cwd_session():
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def tmpd_cwd_session(pytestconfig):
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config = re.sub(r"[^A-z0-9_-]+", "_", pytestconfig.getoption('config')[0])
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cwd = pathlib.Path(os.getcwd())
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pytest_dir = cwd / ".pytest"
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pytest_dir.mkdir(mode=0o700, parents=True, exist_ok=True)
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test_dir_prefix = "parsltest-"
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link = pytest_dir / f"{test_dir_prefix}current"
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link.unlink(missing_ok=True)
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n = datetime.now().strftime('%Y%m%d.%H%M%S')
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tmpd = tempfile.mkdtemp(dir=pytest_dir, prefix=f"{test_dir_prefix}{n}-{config}-")
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tmpd = pathlib.Path(tmpd)
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link.symlink_to(tmpd.name)
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yield link
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try:
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preserve = int(os.getenv("PARSL_TEST_PRESERVE_NUM_RUNS", "3"))
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except Exception:
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preserve = 3
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test_runs = sorted(
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d for d in pytest_dir.glob(f"{test_dir_prefix}*")
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if d.is_dir() and not d.is_symlink()
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)
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for run_to_remove in test_runs[:-preserve]:
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run_to_remove.chmod(0o700)
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for root, subdirnames, fnames in os.walk(run_to_remove):
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rpath = pathlib.Path(root)
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for d in subdirnames:
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(rpath / d).lchmod(0o700)
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for f in fnames:
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(rpath / f).lchmod(0o600)
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shutil.rmtree(run_to_remove)
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@pytest.fixture
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def tmpd_cwd(tmpd_cwd_session, request):
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prefix = f"{request.node.name}-"
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tmpd = tempfile.mkdtemp(dir=tmpd_cwd_session, prefix=prefix)
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yield pathlib.Path(tmpd)
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def pytest_addoption(parser):
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@pytest.fixture(autouse=True, scope='session')
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def load_dfk_session(request, pytestconfig):
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def load_dfk_session(request, pytestconfig, tmpd_cwd_session):
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"""Load a dfk around entire test suite, except in local mode.
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The special path `local` indicates that configuration will not come
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load_dfk_local_module for module-level configuration management.
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"""
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RepresentationMixin._validate_repr = True
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config = pytestconfig.getoption('config')[0]
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if config != 'local':
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raise RuntimeError("DFK didn't start as None - there was a DFK from somewhere already")
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if hasattr(module, 'config'):
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parsl_conf = module.config
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elif hasattr(module, 'fresh_config'):
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parsl_conf = module.fresh_config()
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else:
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raise RuntimeError("Config module does not define config or fresh_config")
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if parsl_conf.run_dir == "runinfo": # the default
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parsl_conf.run_dir = tmpd_cwd_session / parsl_conf.run_dir
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dfk = parsl.load(parsl_conf)
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for ex in dfk.executors.values():
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ex.working_dir = tmpd_cwd_session
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yield
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if parsl.dfk() != dfk:
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@pytest.fixture(autouse=True, scope='module')
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def load_dfk_local_module(request, pytestconfig):
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def load_dfk_local_module(request, pytestconfig, tmpd_cwd_session):
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"""Load the dfk around test modules, in local mode.
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If local_config is specified in the test module, it will be loaded using
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be used to perform more interesting DFK initialisation not possible with
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local_config.
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"""
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RepresentationMixin._validate_repr = True
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config = pytestconfig.getoption('config')[0]
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@@ -177,8 +219,15 @@ def load_dfk_local_module(request, pytestconfig):
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assert callable(local_config)
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c = local_config()
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assert isinstance(c, parsl.Config)
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if c.run_dir == "runinfo": # the default
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c.run_dir = tmpd_cwd_session / c.run_dir
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dfk = parsl.load(c)
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for ex in dfk.executors.values():
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ex.working_dir = tmpd_cwd_session
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if callable(local_setup):
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local_setup()
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@@ -1,4 +1,3 @@
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1
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-
import argparse
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1
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import os
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@@ -7,47 +6,28 @@ from parsl import python_app
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def launch_n_random(n=2):
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"""1. Launch a few apps and write the checkpoint once a few have completed
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"""
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def local_config():
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config = fresh_config()
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return config
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def uuid_app():
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import uuid
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def test_initial_checkpoint_write(
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def test_initial_checkpoint_write():
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"""1. Launch a few apps and write the checkpoint once a few have completed
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"""
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config.checkpoint_mode = 'manual'
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parsl.load(config)
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results = launch_n_random(n)
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uuid_app().result()
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cptpath), "DFK checkpoint missing: {0}".format(cptpath)
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assert os.path.exists(cptpath), f"DFK checkpoint missing: {cptpath}"
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cptpath), "Tasks checkpoint missing: {0}".format(cptpath)
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return run_dir, results
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assert os.path.exists(cptpath), f"Tasks checkpoint missing: {cptpath}"
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@@ -1,45 +1,42 @@
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import
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import contextlib
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import os
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from parsl import python_app
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from parsl.tests.configs.local_threads import config
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@contextlib.contextmanager
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def parsl_configured(run_dir, **kw):
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c = fresh_config()
|
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c.run_dir = run_dir
|
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for config_attr, config_val in kw.items():
|
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setattr(c, config_attr, config_val)
|
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dfk = parsl.load(c)
|
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for ex in dfk.executors.values():
|
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ex.working_dir = run_dir
|
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yield dfk
|
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parsl.dfk().cleanup()
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parsl.clear()
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return [i.result() for i in d]
|
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@python_app(cache=True)
|
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def uuid_app():
|
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import uuid
|
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return uuid.uuid4()
|
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@pytest.mark.local
|
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def test_loading_checkpoint(
|
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def test_loading_checkpoint(tmpd_cwd):
|
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"""Load memoization table from previous checkpoint
|
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"""
|
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|
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|
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|
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rundir = parsl.dfk().run_dir
|
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parsl.dfk().cleanup()
|
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parsl.clear()
|
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-
|
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local_config = fresh_config()
|
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local_config.checkpoint_files = [os.path.join(rundir, 'checkpoint')]
|
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parsl.load(local_config)
|
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with parsl_configured(tmpd_cwd, checkpoint_mode="task_exit"):
|
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checkpoint_files = [os.path.join(parsl.dfk().run_dir, "checkpoint")]
|
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result = uuid_app().result()
|
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38
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|
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-
|
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-
|
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with parsl_configured(tmpd_cwd, checkpoint_files=checkpoint_files):
|
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relaunched = uuid_app().result()
|
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41
|
|
42
|
-
|
43
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assert relaunched[i] == results[i], "Expected relaunched to contain cached results from first run"
|
44
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parsl.dfk().cleanup()
|
45
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-
parsl.clear()
|
42
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+
assert result == relaunched, "Expected following call to uuid_app to return cached uuid"
|
@@ -0,0 +1,21 @@
|
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1
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import pytest
|
2
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import random
|
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import string
|
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from parsl.providers.errors import SubmitException
|
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|
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|
8
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@pytest.mark.local
|
9
|
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def test_submit_exception_task_name_deprecation():
|
10
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+
"""This tests the deprecation warning of task_name in SubmitException
|
11
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+
"""
|
12
|
+
j = "the_name-" + "".join(random.sample(string.ascii_lowercase, 10))
|
13
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+
|
14
|
+
ex = SubmitException(j, "m")
|
15
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+
|
16
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+
# the new behaviour
|
17
|
+
assert ex.job_name == j
|
18
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+
|
19
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+
# the old behaviour
|
20
|
+
with pytest.deprecated_call():
|
21
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assert ex.task_name == j
|
@@ -5,7 +5,7 @@ from parsl.tests.configs.local_radical_mpi import fresh_config as local_config
|
|
5
5
|
|
6
6
|
|
7
7
|
@parsl.python_app
|
8
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def
|
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|
+
def some_mpi_func(msg, sleep, comm=None, parsl_resource_specification={}):
|
9
9
|
import time
|
10
10
|
msg = 'hello %d/%d: %s' % (comm.rank, comm.size, msg)
|
11
11
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time.sleep(sleep)
|
@@ -17,11 +17,12 @@ apps = []
|
|
17
17
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18
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19
19
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@pytest.mark.local
|
20
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+
@pytest.mark.radical
|
20
21
|
def test_radical_mpi(n=7):
|
21
22
|
# rank size should be > 1 for the
|
22
23
|
# radical runtime system to run this function in MPI env
|
23
24
|
for i in range(2, n):
|
24
25
|
spec = {'ranks': i}
|
25
|
-
t =
|
26
|
+
t = some_mpi_func(msg='mpi.func.%06d' % i, sleep=1, comm=None, parsl_resource_specification=spec)
|
26
27
|
apps.append(t)
|
27
28
|
assert [len(app.result()) for app in apps] == list(range(2, n))
|
@@ -20,8 +20,8 @@ logger = logging.getLogger(__name__)
|
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@bash_app
|
23
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def touch(filename,
|
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return "touch {}"
|
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+
def touch(filename, outputs=()):
|
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|
+
return f"touch {filename}"
|
25
25
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26
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27
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@python_app
|
@@ -31,52 +31,47 @@ def app_test_in(file):
|
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31
|
pass
|
32
32
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|
33
33
|
|
34
|
+
@pytest.fixture
|
35
|
+
def storage_access_parsl():
|
36
|
+
def _setup_config(*args, **kwargs):
|
37
|
+
tpe = ThreadPoolExecutor(
|
38
|
+
label='local_threads',
|
39
|
+
storage_access=[NoOpTestingFileStaging(*args, **kwargs)]
|
40
|
+
)
|
41
|
+
config = Config(executors=[tpe])
|
42
|
+
parsl.load(config)
|
43
|
+
|
44
|
+
yield _setup_config
|
45
|
+
|
46
|
+
parsl.dfk().cleanup()
|
47
|
+
parsl.clear()
|
48
|
+
|
49
|
+
|
34
50
|
@pytest.mark.local
|
35
|
-
def test_regression_stage_out_does_not_stage_in():
|
36
|
-
|
37
|
-
executors=[
|
38
|
-
ThreadPoolExecutor(
|
39
|
-
label='local_threads',
|
40
|
-
storage_access=[NoOpTestingFileStaging(allow_stage_in=False)]
|
41
|
-
)
|
42
|
-
]
|
43
|
-
)
|
44
|
-
|
45
|
-
parsl.load(no_stageout_config)
|
51
|
+
def test_regression_stage_out_does_not_stage_in(storage_access_parsl, tmpd_cwd):
|
52
|
+
storage_access_parsl(allow_stage_in=False)
|
46
53
|
|
47
54
|
# Test that the helper app runs with no staging
|
48
|
-
touch("test.1", outputs=[]).result()
|
55
|
+
touch(str(tmpd_cwd / "test.1"), outputs=[]).result()
|
49
56
|
|
50
|
-
# Test with stage-out, checking that provider stage
|
51
|
-
# invoked. If stage-in is invoked,
|
57
|
+
# Test with stage-out, checking that provider stage-in is never
|
58
|
+
# invoked. If stage-in is invoked, then the NoOpTestingFileStaging
|
52
59
|
# provider will raise an exception, which should propagate to
|
53
60
|
# .result() here.
|
54
|
-
|
61
|
+
fpath = tmpd_cwd / "test.2"
|
62
|
+
touch(str(fpath), outputs=[File(fpath)]).result()
|
55
63
|
|
56
64
|
# Test that stage-in exceptions propagate out to user code.
|
57
65
|
with pytest.raises(NoOpError):
|
58
66
|
touch("test.3", inputs=[File("test.3")]).result()
|
59
67
|
|
60
|
-
parsl.dfk().cleanup()
|
61
|
-
parsl.clear()
|
62
|
-
|
63
68
|
|
64
69
|
@pytest.mark.local
|
65
|
-
def test_regression_stage_in_does_not_stage_out():
|
66
|
-
|
67
|
-
|
68
|
-
|
69
|
-
|
70
|
-
storage_access=[NoOpTestingFileStaging(allow_stage_out=False)]
|
71
|
-
)
|
72
|
-
],
|
73
|
-
)
|
74
|
-
|
75
|
-
parsl.load(no_stageout_config)
|
76
|
-
|
77
|
-
f = open("test.4", "a")
|
78
|
-
f.write("test")
|
79
|
-
f.close()
|
70
|
+
def test_regression_stage_in_does_not_stage_out(storage_access_parsl, tmpd_cwd):
|
71
|
+
storage_access_parsl(allow_stage_out=False)
|
72
|
+
|
73
|
+
fpath = tmpd_cwd / "test.4"
|
74
|
+
fpath.write_text("test")
|
80
75
|
|
81
76
|
# Test that stage in does not invoke stage out. If stage out is
|
82
77
|
# attempted, then the NoOpTestingFileStaging provider will raise
|
@@ -86,6 +81,3 @@ def test_regression_stage_in_does_not_stage_out():
|
|
86
81
|
# Test that stage out exceptions propagate to user code.
|
87
82
|
with pytest.raises(NoOpError):
|
88
83
|
touch("test.5", outputs=[File("test.5")]).result()
|
89
|
-
|
90
|
-
parsl.dfk().cleanup()
|
91
|
-
parsl.clear()
|
@@ -9,111 +9,95 @@ import pytest
|
|
9
9
|
# specificed with --config, not this one.
|
10
10
|
from parsl.tests.configs.htex_local import fresh_config as local_config
|
11
11
|
|
12
|
+
"""
|
13
|
+
Test staging for an http file
|
12
14
|
|
13
|
-
|
14
|
-
|
15
|
-
|
16
|
-
strs = u.readlines()
|
17
|
-
strs.sort()
|
18
|
-
with open(outputs[0].filepath, 'w') as s:
|
19
|
-
for e in strs:
|
20
|
-
s.write(e)
|
21
|
-
|
15
|
+
Create a remote input file (https) that points to unsorted.txt, then
|
16
|
+
a local file for output data (sorted.txt).
|
17
|
+
"""
|
22
18
|
|
23
|
-
|
24
|
-
|
25
|
-
|
19
|
+
_unsorted_url = (
|
20
|
+
'https://gist.githubusercontent.com/yadudoc/7f21dd15e64a421990a46766bfa5359c/'
|
21
|
+
'raw/7fe04978ea44f807088c349f6ecb0f6ee350ec49/unsorted.txt'
|
22
|
+
)
|
23
|
+
_exp_sorted = sorted(f"{i}\n" for i in range(1, 101))[:20]
|
26
24
|
|
27
|
-
Create a remote input file (https) that points to unsorted.txt.
|
28
|
-
"""
|
29
25
|
|
30
|
-
|
31
|
-
|
32
|
-
|
26
|
+
@python_app
|
27
|
+
def sort_strings(inputs=(), outputs=()):
|
28
|
+
from parsl.tests.test_staging import read_sort_write
|
29
|
+
read_sort_write(inputs[0].filepath, outputs[0].filepath)
|
33
30
|
|
34
|
-
# Create a local file for output data
|
35
|
-
sorted_file = File('sorted.txt')
|
36
31
|
|
37
|
-
|
38
|
-
|
32
|
+
@python_app
|
33
|
+
def sort_strings_kw(*, x=None, outputs=()):
|
34
|
+
from parsl.tests.test_staging import read_sort_write
|
35
|
+
read_sort_write(x.filepath, outputs[0].filepath)
|
39
36
|
|
40
37
|
|
41
38
|
@python_app
|
42
|
-
def
|
43
|
-
|
44
|
-
|
45
|
-
strs.sort()
|
46
|
-
with open(outputs[0].filepath, 'w') as s:
|
47
|
-
for e in strs:
|
48
|
-
s.write(e)
|
39
|
+
def sort_strings_arg(x, /, outputs=()):
|
40
|
+
from parsl.tests.test_staging import read_sort_write
|
41
|
+
read_sort_write(x.filepath, outputs[0].filepath)
|
49
42
|
|
50
43
|
|
51
|
-
@
|
52
|
-
def
|
44
|
+
@python_app(executors=['other'])
|
45
|
+
def sort_strings_additional_executor(inputs=(), outputs=()):
|
46
|
+
from parsl.tests.test_staging import read_sort_write
|
47
|
+
read_sort_write(inputs[0].filepath, outputs[0].filepath)
|
53
48
|
|
54
|
-
# unsorted_file = File('https://testbed.petrel.host/test/public/unsorted.txt')
|
55
|
-
unsorted_file = File('https://gist.githubusercontent.com/yadudoc/7f21dd15e64a421990a46766bfa5359c/'
|
56
|
-
'raw/7fe04978ea44f807088c349f6ecb0f6ee350ec49/unsorted.txt')
|
57
49
|
|
58
|
-
|
59
|
-
|
50
|
+
@pytest.mark.cleannet
|
51
|
+
def test_staging_https_cleannet(tmpd_cwd):
|
52
|
+
unsorted_file = File(_unsorted_url)
|
53
|
+
sorted_file = File(tmpd_cwd / 'sorted.txt')
|
60
54
|
|
61
|
-
|
62
|
-
|
55
|
+
sort_strings(inputs=[unsorted_file], outputs=[sorted_file]).result()
|
56
|
+
with open(sorted_file) as f:
|
57
|
+
assert all(a == b for a, b in zip(f.readlines(), _exp_sorted))
|
63
58
|
|
64
59
|
|
65
|
-
@
|
66
|
-
def
|
67
|
-
|
68
|
-
|
69
|
-
strs.sort()
|
70
|
-
with open(outputs[0].filepath, 'w') as s:
|
71
|
-
for e in strs:
|
72
|
-
s.write(e)
|
60
|
+
@pytest.mark.local
|
61
|
+
def test_staging_https_local(tmpd_cwd):
|
62
|
+
unsorted_file = File(_unsorted_url)
|
63
|
+
sorted_file = File(tmpd_cwd / 'sorted.txt')
|
73
64
|
|
65
|
+
sort_strings(inputs=[unsorted_file], outputs=[sorted_file]).result()
|
66
|
+
with open(sorted_file) as f:
|
67
|
+
assert all(a == b for a, b in zip(f.readlines(), _exp_sorted))
|
74
68
|
|
75
|
-
@pytest.mark.cleannet
|
76
|
-
def test_staging_https_args():
|
77
69
|
|
78
|
-
|
79
|
-
|
80
|
-
|
70
|
+
@pytest.mark.cleannet
|
71
|
+
def test_staging_https_kwargs(tmpd_cwd):
|
72
|
+
unsorted_file = File(_unsorted_url)
|
73
|
+
sorted_file = File(tmpd_cwd / 'sorted.txt')
|
81
74
|
|
82
|
-
|
83
|
-
sorted_file
|
75
|
+
sort_strings_kw(x=unsorted_file, outputs=[sorted_file]).result()
|
76
|
+
with open(sorted_file) as f:
|
77
|
+
assert all(a == b for a, b in zip(f.readlines(), _exp_sorted))
|
84
78
|
|
85
|
-
f = sort_strings_arg(unsorted_file, outputs=[sorted_file])
|
86
|
-
f.result()
|
87
79
|
|
80
|
+
@pytest.mark.cleannet
|
81
|
+
def test_staging_https_args(tmpd_cwd):
|
82
|
+
unsorted_file = File(_unsorted_url)
|
83
|
+
sorted_file = File(tmpd_cwd / 'sorted.txt')
|
88
84
|
|
89
|
-
|
90
|
-
|
91
|
-
|
92
|
-
strs = u.readlines()
|
93
|
-
strs.sort()
|
94
|
-
with open(outputs[0].filepath, 'w') as s:
|
95
|
-
for e in strs:
|
96
|
-
s.write(e)
|
85
|
+
sort_strings_arg(unsorted_file, outputs=[sorted_file]).result()
|
86
|
+
with open(sorted_file) as f:
|
87
|
+
assert all(a == b for a, b in zip(f.readlines(), _exp_sorted))
|
97
88
|
|
98
89
|
|
99
90
|
@pytest.mark.cleannet
|
100
91
|
@pytest.mark.local
|
101
|
-
def test_staging_https_additional_executor():
|
102
|
-
|
103
|
-
|
104
|
-
Create a remote input file (https) that points to unsorted.txt.
|
105
|
-
"""
|
106
|
-
|
107
|
-
# unsorted_file = File('https://testbed.petrel.host/test/public/unsorted.txt')
|
108
|
-
unsorted_file = File('https://gist.githubusercontent.com/yadudoc/7f21dd15e64a421990a46766bfa5359c/'
|
109
|
-
'raw/7fe04978ea44f807088c349f6ecb0f6ee350ec49/unsorted.txt')
|
110
|
-
|
111
|
-
# Create a local file for output data
|
112
|
-
sorted_file = File('sorted.txt')
|
92
|
+
def test_staging_https_additional_executor(tmpd_cwd):
|
93
|
+
unsorted_file = File(_unsorted_url)
|
94
|
+
sorted_file = File(tmpd_cwd / 'sorted.txt')
|
113
95
|
|
114
96
|
other_executor = parsl.ThreadPoolExecutor(label='other')
|
97
|
+
other_executor.working_dir = tmpd_cwd
|
115
98
|
|
116
99
|
parsl.dfk().add_executors([other_executor])
|
117
100
|
|
118
|
-
|
119
|
-
|
101
|
+
sort_strings_additional_executor(inputs=[unsorted_file], outputs=[sorted_file]).result()
|
102
|
+
with open(sorted_file) as f:
|
103
|
+
assert all(a == b for a, b in zip(f.readlines(), _exp_sorted))
|
File without changes
|
@@ -0,0 +1,68 @@
|
|
1
|
+
import pytest
|
2
|
+
|
3
|
+
from parsl.utils import RepresentationMixin
|
4
|
+
|
5
|
+
|
6
|
+
class GoodRepr(RepresentationMixin):
|
7
|
+
def __init__(self, x, y):
|
8
|
+
self.x = x
|
9
|
+
self.y = y
|
10
|
+
|
11
|
+
|
12
|
+
class BadRepr(RepresentationMixin):
|
13
|
+
"""This class incorrectly subclasses RepresentationMixin.
|
14
|
+
It does not store the parameter x on self.
|
15
|
+
"""
|
16
|
+
def __init__(self, x, y):
|
17
|
+
self.y = y
|
18
|
+
|
19
|
+
|
20
|
+
@pytest.mark.local
|
21
|
+
def test_repr_good():
|
22
|
+
p1 = "parameter 1"
|
23
|
+
p2 = "the second parameter"
|
24
|
+
|
25
|
+
# repr should not raise an exception
|
26
|
+
r = repr(GoodRepr(p1, p2))
|
27
|
+
|
28
|
+
# representation should contain both values supplied
|
29
|
+
# at object creation.
|
30
|
+
assert p1 in r
|
31
|
+
assert p2 in r
|
32
|
+
|
33
|
+
|
34
|
+
@pytest.mark.local
|
35
|
+
def test_repr_bad():
|
36
|
+
p1 = "parameter 1"
|
37
|
+
p2 = "the second parameter"
|
38
|
+
|
39
|
+
# repr should raise an exception
|
40
|
+
with pytest.raises(AttributeError):
|
41
|
+
repr(BadRepr(p1, p2))
|
42
|
+
|
43
|
+
|
44
|
+
class NonValidatingRepresentationMixin(RepresentationMixin):
|
45
|
+
"""This will override the process level RepresentationMixin which can
|
46
|
+
be set to validating mode by pytest fixtures"""
|
47
|
+
_validate_repr = False
|
48
|
+
|
49
|
+
|
50
|
+
class BadReprNonValidating(NonValidatingRepresentationMixin):
|
51
|
+
"""This class incorrectly subclasses RepresentationMixin.
|
52
|
+
It does not store the parameter x on self.
|
53
|
+
"""
|
54
|
+
def __init__(self, x, y):
|
55
|
+
self.y = y
|
56
|
+
|
57
|
+
|
58
|
+
@pytest.mark.local
|
59
|
+
def test_repr_bad_unvalidated():
|
60
|
+
p1 = "parameter 1"
|
61
|
+
p2 = "the second parameter"
|
62
|
+
|
63
|
+
# repr should not raise an exception
|
64
|
+
r = repr(BadReprNonValidating(p1, p2))
|
65
|
+
# parameter 2 should be found in the representation, but not
|
66
|
+
# parameter 1
|
67
|
+
assert p1 not in r
|
68
|
+
assert p2 in r
|
parsl/utils.py
CHANGED
@@ -191,6 +191,8 @@ class RepresentationMixin:
|
|
191
191
|
"""
|
192
192
|
__max_width__ = 80
|
193
193
|
|
194
|
+
_validate_repr = False
|
195
|
+
|
194
196
|
def __repr__(self) -> str:
|
195
197
|
init = self.__init__ # type: ignore[misc]
|
196
198
|
|
@@ -211,18 +213,21 @@ class RepresentationMixin:
|
|
211
213
|
else:
|
212
214
|
defaults = {}
|
213
215
|
|
214
|
-
|
215
|
-
|
216
|
-
|
217
|
-
|
218
|
-
|
219
|
-
|
216
|
+
if self._validate_repr:
|
217
|
+
for arg in argspec.args[1:]:
|
218
|
+
if not hasattr(self, arg):
|
219
|
+
template = (f'class {self.__class__.__name__} uses {arg} in the'
|
220
|
+
f' constructor, but does not define it as an '
|
221
|
+
f'attribute')
|
222
|
+
raise AttributeError(template)
|
223
|
+
|
224
|
+
default = "<unrecorded>"
|
220
225
|
|
221
226
|
if len(defaults) != 0:
|
222
|
-
args = [getattr(self, a) for a in argspec.args[1:-len(defaults)]]
|
227
|
+
args = [getattr(self, a, default) for a in argspec.args[1:-len(defaults)]]
|
223
228
|
else:
|
224
|
-
args = [getattr(self, a) for a in argspec.args[1:]]
|
225
|
-
kwargs = {key: getattr(self, key) for key in defaults}
|
229
|
+
args = [getattr(self, a, default) for a in argspec.args[1:]]
|
230
|
+
kwargs = {key: getattr(self, key, default) for key in defaults}
|
226
231
|
|
227
232
|
def assemble_multiline(args: List[str], kwargs: Dict[str, object]) -> str:
|
228
233
|
def indent(text: str) -> str:
|
parsl/version.py
CHANGED
@@ -1,9 +1,9 @@
|
|
1
1
|
Metadata-Version: 2.1
|
2
2
|
Name: parsl
|
3
|
-
Version: 2024.1.
|
3
|
+
Version: 2024.1.15
|
4
4
|
Summary: Simple data dependent workflows in Python
|
5
5
|
Home-page: https://github.com/Parsl/parsl
|
6
|
-
Download-URL: https://github.com/Parsl/parsl/archive/2024.01.
|
6
|
+
Download-URL: https://github.com/Parsl/parsl/archive/2024.01.15.tar.gz
|
7
7
|
Author: The Parsl Team
|
8
8
|
Author-email: parsl@googlegroups.com
|
9
9
|
License: Apache 2.0
|
@@ -1,13 +1,13 @@
|
|
1
1
|
parsl/__init__.py,sha256=hq8rJmP59wzd9-yxaGcmq5gPpshOopH-Y1K0BkUBNY0,1843
|
2
|
-
parsl/addresses.py,sha256=
|
2
|
+
parsl/addresses.py,sha256=bkaRhM4IZ4iZzh6ZkRXPvCLKFkbJ6HX2AOjYyujCiO8,4814
|
3
3
|
parsl/config.py,sha256=ysUWBfm9bygayHHdItaJbP4oozkHJJmVQVnWCt5igjE,6808
|
4
4
|
parsl/errors.py,sha256=SzINzQFZDBDbj9l-DPQznD0TbGkNhHIRAPkcBCogf_A,1019
|
5
5
|
parsl/log_utils.py,sha256=AGem-dhQs5TYUyJg6GKkRuHxAw8FHhYlWB_0s7_ROw4,3175
|
6
6
|
parsl/multiprocessing.py,sha256=w3t1pFkHo4oZpznc2KF6Ff-Jj8MvXqvjm-hoiRqZDDQ,1984
|
7
7
|
parsl/process_loggers.py,sha256=1G3Rfrh5wuZNo2X03grG4kTYPGOxz7hHCyG6L_A3b0A,1137
|
8
8
|
parsl/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
9
|
-
parsl/utils.py,sha256=
|
10
|
-
parsl/version.py,sha256=
|
9
|
+
parsl/utils.py,sha256=TTM6gFgW2EscFsNNDGNRmHdXSMIo7TO5yYt8PdyRqVI,11767
|
10
|
+
parsl/version.py,sha256=WpmqICAVsqNhdyjF-ha60RMe-o4rQkt9Jfb9C2bTing,131
|
11
11
|
parsl/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
12
12
|
parsl/app/app.py,sha256=wAHchJetgnicT1pn0NJKDeDX0lV3vDFlG8cQd_Ciax4,8522
|
13
13
|
parsl/app/bash.py,sha256=bx9x1XFwkOTpZZD3CPwnVL9SyNRDjbUGtOnuGLvxN_8,5396
|
@@ -62,7 +62,7 @@ parsl/data_provider/http.py,sha256=nDHTW7XmJqAukWJjPRQjyhUXt8r6GsQ36mX9mv_wOig,2
|
|
62
62
|
parsl/data_provider/rsync.py,sha256=2-ZxqrT-hBj39x082NusJaBqsGW4Jd2qCW6JkVPpEl0,4254
|
63
63
|
parsl/data_provider/staging.py,sha256=l-mAXFburs3BWPjkSmiQKuAgJpsxCG62yATPDbrafYI,4523
|
64
64
|
parsl/dataflow/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
65
|
-
parsl/dataflow/dflow.py,sha256=
|
65
|
+
parsl/dataflow/dflow.py,sha256=VymK_7clCbzFBlX8EyaCtUtTtE6BjULiezP3WpW-eoI,63845
|
66
66
|
parsl/dataflow/errors.py,sha256=w2vOt_ymzG2dOqJUO4IDcmTlrCIHlMZL8nBVyVq0O_8,2176
|
67
67
|
parsl/dataflow/futures.py,sha256=aVfEUTzp4-EdunDAtNcqVQf8l_A7ArDi2c82KZMwxfY,5256
|
68
68
|
parsl/dataflow/memoization.py,sha256=AsJO6c6cRp2ac6H8uGn2USlEi78_nX3QWvpxYt4XdYE,9583
|
@@ -80,7 +80,7 @@ parsl/executors/flux/executor.py,sha256=tf9xPmWgEsgEjzs89dJ-sMx-QaqRpM1R1crX3tp0
|
|
80
80
|
parsl/executors/flux/flux_instance_manager.py,sha256=tTEOATClm9SwdgLeBRWPC6D55iNDuh0YxqJOw3c3eQ4,2036
|
81
81
|
parsl/executors/high_throughput/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
82
82
|
parsl/executors/high_throughput/errors.py,sha256=vl69wLuVOplbKxHI9WphEGBExHWkTn5n8T9QhBXuNH0,380
|
83
|
-
parsl/executors/high_throughput/executor.py,sha256=
|
83
|
+
parsl/executors/high_throughput/executor.py,sha256=Rpv3yd3vAQxNXRqsyo2_8aCNUoaCtscu6FEt7BPrrSE,31983
|
84
84
|
parsl/executors/high_throughput/interchange.py,sha256=tX_EvQf7WkSKMJG-TNmA-WADjhtKZqviYpM406Td4dA,29334
|
85
85
|
parsl/executors/high_throughput/manager_record.py,sha256=T8-JVMfDJU6SJfzJRooD0mO8AHGMXlcn3PBOM0m_vng,366
|
86
86
|
parsl/executors/high_throughput/monitoring_info.py,sha256=3gQpwQjjNDEBz0cQqJZB6hRiwLiWwXs83zkQDmbOwxY,297
|
@@ -104,13 +104,13 @@ parsl/executors/taskvine/utils.py,sha256=iSrIogeiauL3UNy_9tiZp1cBSNn6fIJkMYQRVi1
|
|
104
104
|
parsl/executors/workqueue/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
105
105
|
parsl/executors/workqueue/errors.py,sha256=ghB93Ptb_QbOAvgLe7siV_snRRkU_T-cFHv3AR6Ziwo,541
|
106
106
|
parsl/executors/workqueue/exec_parsl_function.py,sha256=NtWNeBvRqksej38eRPw8zPBJ1CeW6vgaitve0tfz_qc,7801
|
107
|
-
parsl/executors/workqueue/executor.py,sha256=
|
107
|
+
parsl/executors/workqueue/executor.py,sha256=szgelw7HL4K-iLcyzqoGg2dsSN1S9QUXlNr4Z9q11mw,49031
|
108
108
|
parsl/executors/workqueue/parsl_coprocess.py,sha256=6nmNqv7GT472J5smGFKm_TUjeFHy44i5Fl8pUovRoug,6046
|
109
109
|
parsl/executors/workqueue/parsl_coprocess_stub.py,sha256=_bJmpPIgL42qM6bVzeEKt1Mn1trSP41rtJguXxPGfHI,735
|
110
110
|
parsl/jobs/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
111
111
|
parsl/jobs/error_handlers.py,sha256=WYn69jtWgfEsThCMxkGvJ2qoCfebc4IGd4JEolj2ww8,2279
|
112
112
|
parsl/jobs/errors.py,sha256=cpSQXCrlKtuHsQf7usjF-lX8XsDkFnE5kWpmFjiN6OU,178
|
113
|
-
parsl/jobs/job_status_poller.py,sha256=
|
113
|
+
parsl/jobs/job_status_poller.py,sha256=xQQauyNpmK23t6ViYm-AvvDLHsxVTmghjlACZvfL6LQ,4973
|
114
114
|
parsl/jobs/states.py,sha256=lwe2fUdPjaUcS-N9qTPbS9du8mpX_YAQ7vlVzCXDKVE,4574
|
115
115
|
parsl/jobs/strategy.py,sha256=9V07D8bydpyxvNNRH89JZa0Pt-bjjowrSmCc5mv6awY,12903
|
116
116
|
parsl/launchers/__init__.py,sha256=k8zAB3IBP-brfqXUptKwGkvsIRaXjAJZNBJa2XVtY1A,546
|
@@ -150,7 +150,7 @@ parsl/monitoring/visualization/templates/workflows_summary.html,sha256=7brKKNsxc
|
|
150
150
|
parsl/providers/__init__.py,sha256=jd-1_vd-HtWYDHzwO30lNW5GMw6nfeTyNn3tI8CG7L4,1207
|
151
151
|
parsl/providers/base.py,sha256=LvSMClsbCQI_7geGdNDpKZ6vWCl1EpD73o0xkxilqJ4,5702
|
152
152
|
parsl/providers/cluster_provider.py,sha256=FLl3AUHdFRRapQl_YoM1gxg_UhH3gxxaDvl6NNQqSTg,4701
|
153
|
-
parsl/providers/errors.py,sha256=
|
153
|
+
parsl/providers/errors.py,sha256=ZBZdLKmz1cLqL1ukhimlUAtUUj94WWc8ebr2GI8_I8I,2438
|
154
154
|
parsl/providers/ad_hoc/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
155
155
|
parsl/providers/ad_hoc/ad_hoc.py,sha256=jeYMxMT_ox7banr8Db_UeT2qer6XTGLZOZvC307S54U,8302
|
156
156
|
parsl/providers/aws/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
@@ -195,7 +195,7 @@ parsl/serialize/facade.py,sha256=0A--_bB_8e5RRT-weYu5Ak33zN_lqZeaJU1x7JXaoBQ,563
|
|
195
195
|
parsl/serialize/proxystore.py,sha256=Yo-38odKlSKSuQfXU4cB5YM9sYV_302uPn1z_en19SU,1623
|
196
196
|
parsl/tests/__init__.py,sha256=s_zoz7Ipgykh-QTQvctdpxENrMnmpXY8oe1bJbUmpqY,204
|
197
197
|
parsl/tests/callables_helper.py,sha256=ceP1YYsNtrZgKT6MAIvpgdccEjQ_CpFEOnZBGHKGOx0,30
|
198
|
-
parsl/tests/conftest.py,sha256=
|
198
|
+
parsl/tests/conftest.py,sha256=sbzv8rIzT69i0GzO3662v9EmXwzTVipx-uR2HfqFR4A,13892
|
199
199
|
parsl/tests/test_aalst_patterns.py,sha256=fi6JHKidV7vMJLv2nnu_-Q0ngGLc89mRm8rFrGIwiUM,9615
|
200
200
|
parsl/tests/test_callables.py,sha256=_QsdS8v2nGgOj4_X69NFHZOGUnqbOrOMCA9pCJColZw,1974
|
201
201
|
parsl/tests/test_flux.py,sha256=st9v55o5ZajK_LQUXh1saLwFh2gpaQFGG5mzdnJMNu0,5098
|
@@ -304,8 +304,8 @@ parsl/tests/test_channels/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJW
|
|
304
304
|
parsl/tests/test_channels/test_large_output.py,sha256=PGeNSW_sN5mR7KF1hVL2CPfktydYxo4oNz1wVQ-ENN0,595
|
305
305
|
parsl/tests/test_checkpointing/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
|
306
306
|
parsl/tests/test_checkpointing/test_periodic.py,sha256=Nb_3_eHYnMUJxYvI3y2Tum6cU07ZUtEawAtYsEsXPd0,1662
|
307
|
-
parsl/tests/test_checkpointing/test_python_checkpoint_1.py,sha256=
|
308
|
-
parsl/tests/test_checkpointing/test_python_checkpoint_2.py,sha256=
|
307
|
+
parsl/tests/test_checkpointing/test_python_checkpoint_1.py,sha256=7p_q5aFYYoRQpYmkFekuLOsPgTaILbj5-MMVCDP3Bsg,745
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parsl/tests/test_checkpointing/test_python_checkpoint_2.py,sha256=f1s-qRzIzaCFJauEGU08fhFw6od3yGrMelk792WQuYI,1106
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parsl/tests/test_checkpointing/test_python_checkpoint_3.py,sha256=8Np2OpDeQ8sE1Hmd5rYZo1qgt2xOuR4t-d-41JyLCHI,823
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parsl/tests/test_checkpointing/test_regression_232.py,sha256=AsI6AJ0DcFaefAbEY9qWa41ER0VX-4yLuIdlgvBw360,2637
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parsl/tests/test_checkpointing/test_regression_233.py,sha256=jii7BKuygK6KMIGtg4IeBjix7Z28cYhv57rE9ixoXMU,1774
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@@ -349,6 +349,7 @@ parsl/tests/test_monitoring/test_viz_colouring.py,sha256=k8SiELxPtnGYZ4r02VQt46R
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parsl/tests/test_providers/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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parsl/tests/test_providers/test_local_provider.py,sha256=G6Fuko22SvAtD7xhfQv8k_8HtJuFhZ8aHYcWQt073Pg,6968
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parsl/tests/test_providers/test_slurm_instantiate.py,sha256=eW3pEZRIzZO1-eKFrBc7N5uoN5otwghgbqut74Kyqoc,500
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parsl/tests/test_providers/test_submiterror_deprecation.py,sha256=ZutVj_0VJ7M-5UZV0qisMwId7lT783LAxGEAsMjkeZU,501
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parsl/tests/test_python_apps/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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parsl/tests/test_python_apps/test_arg_input_types.py,sha256=JXpfHiu8lr9BN6u1OzqFvGwBhxzsGTPMewHx6Wdo-HI,670
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parsl/tests/test_python_apps/test_basic.py,sha256=lFqh4ugePbp_FRiHGUXxzV34iS7l8C5UkxTHuLcpnYs,855
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@@ -377,7 +378,7 @@ parsl/tests/test_python_apps/test_simple.py,sha256=LYGjdHvRizTpYzZePPvwKSPwrr2MP
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parsl/tests/test_python_apps/test_timeout.py,sha256=uENfT-1DharQkqkeG7a89E-gU1gjE7ATJrBZGUKvZSA,998
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parsl/tests/test_python_apps/test_type5.py,sha256=kUyA1NuFu-DDXsJNNvJLZVyewZBt7QAOhcGm2DWFTQw,777
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parsl/tests/test_radical/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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parsl/tests/test_radical/test_mpi_funcs.py,sha256=
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parsl/tests/test_radical/test_mpi_funcs.py,sha256=rLC01pdq6354pzHHm4PHMtePg0xOcQO2_2DwivoHvFg,765
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parsl/tests/test_regression/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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parsl/tests/test_regression/test_1480.py,sha256=HNhuw7OYkBGMhN--XgKIl2JPHUj_hXlgL74oS3FqWk4,545
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parsl/tests/test_regression/test_1606_wait_for_current_tasks.py,sha256=frqPtaiVysevj9nCWoQlAeh9K1jQO5zaahr9ev_Mx_0,1134
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parsl/tests/test_serialization/test_basic.py,sha256=51KshqIk2RNr7S2iSkl5tZo40CJBb0h6uby8YPgOGlg,543
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parsl/tests/test_serialization/test_proxystore_configured.py,sha256=_JbMzeUgcR-1Ss2hGAb2v0LBA0fzKpNpfO-HaUCR7Yo,2293
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parsl/tests/test_serialization/test_proxystore_impl.py,sha256=Pn_4ulwCd7Tc6Qlmypq2ImT4DtErGDIfqHHmPTr7aOI,1226
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parsl/tests/test_staging/__init__.py,sha256=
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parsl/tests/test_staging/__init__.py,sha256=WZl9EHSkfYiSoE3Gbulcq2ifmn7IFGUkasJIobL5T5A,208
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parsl/tests/test_staging/staging_provider.py,sha256=DEONOOGrYgDZimE3rkrbzFl_4KxhzmNJledh8Hho9fo,3242
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parsl/tests/test_staging/test_1316.py,sha256=pj1QbmOJSRES1R4Ov380MmVe6xXvPUXh4FB48nE6vjI,2687
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parsl/tests/test_staging/test_docs_1.py,sha256=SIGIYo9w2vwkQ-i9Io38sYYj8ns7uFrD1uziR_0Ae2w,628
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parsl/tests/test_staging/test_docs_2.py,sha256=zy6P6aanR27_U6ASDrB0YyG8udyRvA8r2HRDX5RcslU,463
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parsl/tests/test_staging/test_elaborate_noop_file.py,sha256=
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parsl/tests/test_staging/test_elaborate_noop_file.py,sha256=d694K2jKhyBM0bIY9j3w_huVjTU2CVFPgIRfYFpIQQM,2466
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parsl/tests/test_staging/test_staging_ftp.py,sha256=EkRoTcQ00FZGh8lDVYBdKb-pQ-ybW2Sx5vqGltoMGJ4,778
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parsl/tests/test_staging/test_staging_ftp_in_task.py,sha256=kR2XrGvbvVFDpHg53NnjO04kqEksTJjQAMQwYqBdb2M,884
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parsl/tests/test_staging/test_staging_globus.py,sha256=ds8nDH5dNbI10FV_GxMHyVaY6GPnuPPzkX9IiqROLF0,2339
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parsl/tests/test_staging/test_staging_https.py,sha256=
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parsl/tests/test_staging/test_staging_https_in_task.py,sha256=Ezqcsr_wUXCYXv2sd9yR-zB-NJvxDDizfdvuptH6zBs,1036
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parsl/tests/test_staging/test_staging_https.py,sha256=ESNuvdc_P5JoPaMjBM3ofi1mNJM0U6vahi9JgbCsrPw,3307
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parsl/tests/test_threads/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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parsl/tests/test_threads/test_configs.py,sha256=QA9YjIMAtZ2jmkfOWqBzEfzQQcFVCDizH7Qwiy2HIMQ,909
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parsl/tests/test_threads/test_lazy_errors.py,sha256=nGhYfCMHFZYSy6YJ4gnAmiLl9SfYs0WVnuvj8DXQ9bw,560
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parsl/tests/test_utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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parsl/tests/test_utils/test_representation_mixin.py,sha256=kUZeIDwA2rlbJ3-beGzLLwf3dOplTMCrWJN87etHcyY,1633
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parsl/usage_tracking/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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parsl/usage_tracking/usage.py,sha256=TEuAIm_U_G2ojZxvd0bbVa6gZlU61_mVRa2yJC9mGiI,7555
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parsl-2024.1.
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parsl-2024.1.15.data/scripts/exec_parsl_function.py,sha256=NtWNeBvRqksej38eRPw8zPBJ1CeW6vgaitve0tfz_qc,7801
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parsl-2024.1.15.data/scripts/parsl_coprocess.py,sha256=kzX_1RI3V2KMKs6L-il4I1qkLNVodDKFXN_1FHB9fmM,6031
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parsl-2024.1.15.data/scripts/process_worker_pool.py,sha256=ytz3F8ZYeBr8tFqSRv2O9eZGdsID7oZRulBmmQmZaV8,34056
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parsl-2024.1.15.dist-info/LICENSE,sha256=tAkwu8-AdEyGxGoSvJ2gVmQdcicWw3j1ZZueVV74M-E,11357
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parsl-2024.1.15.dist-info/METADATA,sha256=lO1T0WGGTSX5H5gO1b9g1uS6kl5PfhL1K6b7eu7HAFk,3868
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parsl-2024.1.15.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
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parsl-2024.1.15.dist-info/entry_points.txt,sha256=XqnsWDYoEcLbsMcpnYGKLEnSBmaIe1YoM5YsBdJG2tI,176
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parsl-2024.1.15.dist-info/top_level.txt,sha256=PIheYoUFQtF2icLsgOykgU-Cjuwr2Oi6On2jo5RYgRM,6
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parsl-2024.1.15.dist-info/RECORD,,
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@@ -1,34 +0,0 @@
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import pytest
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from parsl.app.app import python_app
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from parsl.data_provider.files import File
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def sort_strings(inputs=[], outputs=[]):
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with open(inputs[0].filepath, 'r') as u:
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strs = u.readlines()
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with open(outputs[0].filepath, 'w') as s:
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@pytest.mark.local
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def test_staging_https():
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"""Test staging for an http file
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Create a remote input file (https) that points to unsorted.txt.
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"""
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# unsorted_file = File('https://testbed.petrel.host/test/public/unsorted.txt')
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unsorted_file = File('https://gist.githubusercontent.com/yadudoc/7f21dd15e64a421990a46766bfa5359c/'
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'raw/7fe04978ea44f807088c349f6ecb0f6ee350ec49/unsorted.txt')
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# Create a local file for output data
|
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sorted_file = File('sorted.txt')
|
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|
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|
-
f = sort_strings(inputs=[unsorted_file], outputs=[sorted_file])
|
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f.result()
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File without changes
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