paradigma 0.1.2__py3-none-any.whl → 0.2.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- paradigma/__init__.py +1 -3
- paradigma/constants.py +35 -0
- paradigma/feature_extraction.py +678 -0
- paradigma/gait_analysis.py +413 -0
- paradigma/gait_analysis_config.py +244 -0
- paradigma/heart_rate_analysis.py +127 -0
- paradigma/heart_rate_analysis_config.py +9 -0
- paradigma/heart_rate_util.py +173 -0
- paradigma/imu_preprocessing.py +229 -0
- paradigma/ppg/classifier/LR_PPG_quality.pkl +0 -0
- paradigma/ppg/classifier/LR_model.mat +0 -0
- paradigma/ppg/feat_extraction/acc_feature.m +20 -0
- paradigma/ppg/feat_extraction/peakdet.m +64 -0
- paradigma/ppg/feat_extraction/ppg_features.m +53 -0
- paradigma/ppg/glob_functions/extract_hr_segments.m +37 -0
- paradigma/ppg/glob_functions/extract_overlapping_segments.m +23 -0
- paradigma/ppg/glob_functions/jsonlab/AUTHORS.txt +41 -0
- paradigma/ppg/glob_functions/jsonlab/ChangeLog.txt +74 -0
- paradigma/ppg/glob_functions/jsonlab/LICENSE_BSD.txt +25 -0
- paradigma/ppg/glob_functions/jsonlab/LICENSE_GPLv3.txt +699 -0
- paradigma/ppg/glob_functions/jsonlab/README.txt +394 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/entries +368 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/demo_jsonlab_basic.m.svn-base +180 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/demo_ubjson_basic.m.svn-base +180 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/example1.json.svn-base +23 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/example2.json.svn-base +22 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/example3.json.svn-base +11 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/example4.json.svn-base +34 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/jsonlab_basictest.matlab.svn-base +662 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/jsonlab_selftest.m.svn-base +27 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/jsonlab_selftest.matlab.svn-base +144 -0
- paradigma/ppg/glob_functions/jsonlab/examples/.svn/text-base/jsonlab_speedtest.m.svn-base +21 -0
- paradigma/ppg/glob_functions/jsonlab/examples/demo_jsonlab_basic.m +180 -0
- paradigma/ppg/glob_functions/jsonlab/examples/demo_ubjson_basic.m +180 -0
- paradigma/ppg/glob_functions/jsonlab/examples/example1.json +23 -0
- paradigma/ppg/glob_functions/jsonlab/examples/example2.json +22 -0
- paradigma/ppg/glob_functions/jsonlab/examples/example3.json +11 -0
- paradigma/ppg/glob_functions/jsonlab/examples/example4.json +34 -0
- paradigma/ppg/glob_functions/jsonlab/examples/jsonlab_basictest.matlab +662 -0
- paradigma/ppg/glob_functions/jsonlab/examples/jsonlab_selftest.m +27 -0
- paradigma/ppg/glob_functions/jsonlab/examples/jsonlab_selftest.matlab +144 -0
- paradigma/ppg/glob_functions/jsonlab/examples/jsonlab_speedtest.m +21 -0
- paradigma/ppg/glob_functions/jsonlab/jsonopt.m +32 -0
- paradigma/ppg/glob_functions/jsonlab/loadjson.m +566 -0
- paradigma/ppg/glob_functions/jsonlab/loadubjson.m +528 -0
- paradigma/ppg/glob_functions/jsonlab/mergestruct.m +33 -0
- paradigma/ppg/glob_functions/jsonlab/savejson.m +475 -0
- paradigma/ppg/glob_functions/jsonlab/saveubjson.m +504 -0
- paradigma/ppg/glob_functions/jsonlab/varargin2struct.m +40 -0
- paradigma/ppg/glob_functions/sample_prob_final.m +49 -0
- paradigma/ppg/glob_functions/synchronization.m +76 -0
- paradigma/ppg/glob_functions/tsdf_scan_meta.m +22 -0
- paradigma/ppg/hr_functions/Long_TFD_JOT.m +37 -0
- paradigma/ppg/hr_functions/PPG_TFD_HR.m +59 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/.gitignore +4 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/CHANGELOG.md +23 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/LICENCE.md +27 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/README.md +251 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/README.pdf +0 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/common/gen_Doppler_kern.m +142 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/common/gen_Doppler_lag_kern.m +314 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/common/gen_lag_kern.m +123 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/dec_tfd.m +154 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/decimated_TFDs/dec_di_gdtfd.m +194 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/decimated_TFDs/dec_li_gdtfd.m +200 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/decimated_TFDs/dec_nonsep_gdtfd.m +229 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/decimated_TFDs/dec_sep_gdtfd.m +241 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/full_TFDs/di_gdtfd.m +157 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/full_TFDs/li_gdtfd.m +190 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/full_TFDs/nonsep_gdtfd.m +196 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/full_TFDs/sep_gdtfd.m +199 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/full_tfd.m +144 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/load_curdir.m +13 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/pics/decimated_TFDs_examples.png +0 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/pics/full_TFDs_examples.png +0 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/check_dec_params_seq.m +79 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/dispEE.m +9 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/dispVars.m +26 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/disp_bytes.m +25 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/fold_vector_full.m +40 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/fold_vector_half.m +34 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/gen_LFM.m +29 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/get_analytic_signal.m +76 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/get_window.m +176 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/isreal_fn.m +11 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/padWin.m +97 -0
- paradigma/ppg/hr_functions/TFD toolbox JOT/utils/vtfd.m +149 -0
- paradigma/ppg/preprocessing/preprocessing_imu.m +15 -0
- paradigma/ppg/preprocessing/preprocessing_ppg.m +13 -0
- paradigma/ppg_preprocessing.py +313 -0
- paradigma/preprocessing_config.py +64 -0
- paradigma/quantification.py +58 -0
- paradigma/tremor/TremorFeaturesAndClassification.m +345 -0
- paradigma/tremor/feat_extraction/DerivativesExtract.m +22 -0
- paradigma/tremor/feat_extraction/ExtractBandSignalsRMS.m +72 -0
- paradigma/tremor/feat_extraction/MFCCExtract.m +100 -0
- paradigma/tremor/feat_extraction/PSDBandPower.m +52 -0
- paradigma/tremor/feat_extraction/PSDEst.m +63 -0
- paradigma/tremor/feat_extraction/PSDExtrAxis.m +88 -0
- paradigma/tremor/feat_extraction/PSDExtrOpt.m +95 -0
- paradigma/tremor/preprocessing/InterpData.m +32 -0
- paradigma/tremor/weekly_aggregates/WeeklyAggregates.m +295 -0
- paradigma/util.py +50 -0
- paradigma/windowing.py +217 -0
- paradigma-0.2.0.dist-info/LICENSE +192 -0
- paradigma-0.2.0.dist-info/METADATA +58 -0
- paradigma-0.2.0.dist-info/RECORD +108 -0
- paradigma/dummy.py +0 -3
- paradigma-0.1.2.dist-info/LICENSE +0 -201
- paradigma-0.1.2.dist-info/METADATA +0 -18
- paradigma-0.1.2.dist-info/RECORD +0 -6
- {paradigma-0.1.2.dist-info → paradigma-0.2.0.dist-info}/WHEEL +0 -0
paradigma/__init__.py
CHANGED
paradigma/constants.py
ADDED
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class DataColumns:
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"""
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Enum for the data channels in tsdf.
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"""
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ACCELEROMETER_X = "accelerometer_x"
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ACCELEROMETER_Y = "accelerometer_y"
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ACCELEROMETER_Z = "accelerometer_z"
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GYROSCOPE_X = "gyroscope_x"
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GYROSCOPE_Y = "gyroscope_y"
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GYROSCOPE_Z = "gyroscope_z"
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PPG = "green"
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TIME = "time"
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class DataUnits:
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"""
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Enum for the data channel unit types in tsdf.
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"""
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ACCELERATION = "m/s^2"
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""" The acceleration is in m/s^2. """
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ROTATION = "deg/s"
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""" The rotation is in degrees per second. """
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class TimeUnit:
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"""
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Enum for the `time` channel unit types in tsdf.
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"""
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relative_ms = "relative_ms"
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""" The time is relative to the start time in milliseconds. """
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absolute_ms = "absolute_ms"
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""" The time is absolute in milliseconds. """
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difference_ms = "difference_ms"
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""" The time is the difference between consecutive samples in milliseconds. """
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UNIX_TICKS_MS: int = 1000
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