opencloning 0.4.7__py3-none-any.whl → 0.5__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (38) hide show
  1. opencloning/app_settings.py +7 -0
  2. opencloning/batch_cloning/pombe/__init__.py +2 -2
  3. opencloning/batch_cloning/pombe/pombe_clone.py +31 -112
  4. opencloning/batch_cloning/pombe/pombe_summary.py +20 -8
  5. opencloning/batch_cloning/ziqiang_et_al2024/__init__.py +8 -8
  6. opencloning/batch_cloning/ziqiang_et_al2024/ziqiang_et_al2024.json +2 -9
  7. opencloning/bug_fixing/backend_v0_3.py +13 -5
  8. opencloning/catalogs/__init__.py +36 -0
  9. opencloning/catalogs/igem2024.yaml +2172 -0
  10. opencloning/catalogs/openDNA_collections.yaml +1161 -0
  11. opencloning/catalogs/readme.txt +1 -0
  12. opencloning/catalogs/seva.tsv +231 -0
  13. opencloning/catalogs/snapgene.yaml +2837 -0
  14. opencloning/dna_functions.py +155 -158
  15. opencloning/dna_utils.py +45 -62
  16. opencloning/ebic/primer_design.py +24 -14
  17. opencloning/endpoints/annotation.py +9 -13
  18. opencloning/endpoints/assembly.py +157 -378
  19. opencloning/endpoints/endpoint_utils.py +52 -0
  20. opencloning/endpoints/external_import.py +169 -124
  21. opencloning/endpoints/no_assembly.py +23 -39
  22. opencloning/endpoints/no_input.py +32 -47
  23. opencloning/endpoints/other.py +1 -1
  24. opencloning/endpoints/primer_design.py +23 -17
  25. opencloning/http_client.py +2 -2
  26. opencloning/ncbi_requests.py +113 -47
  27. opencloning/primer3_functions.py +3 -3
  28. opencloning/primer_design.py +1 -1
  29. opencloning/pydantic_models.py +10 -510
  30. opencloning/request_examples.py +10 -22
  31. opencloning/temp_functions.py +50 -0
  32. {opencloning-0.4.7.dist-info → opencloning-0.5.dist-info}/METADATA +18 -8
  33. opencloning-0.5.dist-info/RECORD +51 -0
  34. {opencloning-0.4.7.dist-info → opencloning-0.5.dist-info}/WHEEL +1 -1
  35. opencloning/cre_lox.py +0 -116
  36. opencloning/gateway.py +0 -154
  37. opencloning-0.4.7.dist-info/RECORD +0 -45
  38. {opencloning-0.4.7.dist-info → opencloning-0.5.dist-info}/licenses/LICENSE +0 -0
opencloning/catalogs/openDNA_collections.yaml ADDED
@@ -0,0 +1,1161 @@
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+ Bacillus subtilis Protein Secretion Toolkit:
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+ - id: ODC_0331
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+ name: BsubSecTagLP_1
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+ path: Bacillus subtilis Protein Secretion Toolkit/Plasmids_Genbank/ODC_0331.gb
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+ - id: ODC_0332
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+ name: BsubSecTagLP_2
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+ path: Bacillus subtilis Protein Secretion Toolkit/Plasmids_Genbank/ODC_0332.gb
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+ - id: ODC_0333
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+ name: BsubSecTagLP_3
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+ path: Bacillus subtilis Protein Secretion Toolkit/Plasmids_Genbank/ODC_0333.gb
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+ - id: ODC_0334
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+ name: BsubSecTagLP_4
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+ path: Bacillus subtilis Protein Secretion Toolkit/Plasmids_Genbank/ODC_0334.gb
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+ - id: ODC_0335
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+ name: BsubSecTagLP_5
16
+ path: Bacillus subtilis Protein Secretion Toolkit/Plasmids_Genbank/ODC_0335.gb
17
+ - id: ODC_0336
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+ name: BsubSecTagLP_6
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+ path: Bacillus subtilis Protein Secretion Toolkit/Plasmids_Genbank/ODC_0336.gb
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+ Ecoli Nanobody Toolkit:
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+ - id: AB_araCpBAD
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/AB_araCpBAD.gb
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+ - id: AB_araCpBADv2
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/AB_araCpBADv2.gb
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+ - id: AB_araCpBADv3
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/AB_araCpBADv3.gb
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+ - id: AB_pBAD
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/AB_pBAD.gb
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+ - id: AB_pKat
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/AB_pKat.gb
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+ - id: AB_pKatPu
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/AB_pKatPu.gb
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+ - id: BC_RBS_UTRcfps
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BC_RBS_UTRcfps.gb
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+ - id: BC_RJ_SD5
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BC_RJ_SD5.gb
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+ - id: BC_RJ_SD8
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BC_RJ_SD8.gb
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+ - id: BT1_RBS_UTRcfps
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BT1_RBS_UTRcfps.gb
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+ - id: BT1_RJ_B34_6H_TEVc
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BT1_RJ_B34_6H_TEVc.gb
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+ - id: BT1_RJ_BCD2_6H_TEVc
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BT1_RJ_BCD2_6H_TEVc.gb
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+ - id: BT1_RJ_SD5
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BT1_RJ_SD5.gb
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+ - id: BT1_RJ_SD8
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BT1_RJ_SD8.gb
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+ - id: BT1_RJ_SD8_6H_TEVc
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/BT1_RJ_SD8_6H_TEVc.gb
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+ - id: CD_FKBP
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_FKBP.gb
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+ - id: CD_FRB
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_FRB.gb
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+ - id: CD_LuxAB
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_LuxAB.gb
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+ - id: CD_NbB1
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_NbB1.gb
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+ - id: CD_NbLag14 (eGFP)
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_NbLag14 (eGFP).gb
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+ - id: CD_NbLag2 (eGFP)
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_NbLag2 (eGFP).gb
84
+ - id: CD_NbVHHE
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_NbVHHE.gb
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+ - id: CD_NbVHHV
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_NbVHHV.gb
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+ - id: CD_W25
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_W25.gb
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+ - id: CD_W276
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_W276.gb
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+ - id: CD_ZA
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_ZA.gb
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+ - id: CD_ZB
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_ZB.gb
102
+ - id: CD_ZBn
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+ name: null
104
+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_ZBn.gb
105
+ - id: CD_eGFP
106
+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/CD_eGFP.gb
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+ - id: DT4_LLinkerC
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/DT4_LLinkerC.gb
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+ - id: DT4_Linker14
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/DT4_Linker14.gb
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+ - id: DT4_Linker7
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/DT4_Linker7.gb
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+ - id: DT4_MLinkerC
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/DT4_MLinkerC.gb
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+ - id: EF_TermT7
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/EF_TermT7.gb
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+ - id: T1T3_LgBit
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T1T3_LgBit.gb
126
+ - id: 'T1T3_NT7pd '
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T1T3_NT7pd .gb
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+ - id: 'T1T3_NT7pdo '
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T1T3_NT7pdo .gb
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+ - id: T1T3_T7Nev
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T1T3_T7Nev.gb
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+ - id: T1T3_T7Nwt_STOP
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T1T3_T7Nwt_STOP.gb
138
+ - id: T3C_LLinkerN
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T3C_LLinkerN.gb
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+ - id: T3C_Linker14
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T3C_Linker14.gb
144
+ - id: T3C_Linker28
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T3C_Linker28.gb
147
+ - id: T3C_Linker7
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T3C_Linker7.gb
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+ - id: T3C_MLinkerN
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T3C_MLinkerN.gb
153
+ - id: T4T5_CT7
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+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T4T5_CT7.gb
156
+ - id: T4T5_SmBit
157
+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T4T5_SmBit.gb
159
+ - id: T4T5_T7Cwt_STOP
160
+ name: null
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+ path: Ecoli Nanobody Toolkit/genbank_seq/T4T5_T7Cwt_STOP.gb
162
+ Ecoli Protein Expression Toolkit:
163
+ - id: ODC_0118
164
+ name: CE_meffBlue/Rtms5/ NF pocilloporin /Biobrick K1033902
165
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0118.gb
166
+ - id: ODC_0119
167
+ name: CE_sarcGFP
168
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0119.gb
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+ - id: ODC_0120
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+ name: CE_beta-galactosidase
171
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0120.gb
172
+ - id: ODC_0121
173
+ name: AF_lacZ pDest
174
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0121.gb
175
+ - id: ODC_0122
176
+ name: AE_lacZ pDest
177
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0122.gb
178
+ - id: ODC_0123
179
+ name: AF_high copy (pUC) ori/KanR
180
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0123.gb
181
+ - id: ODC_0124
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+ name: AF_medium copy (pET) ori/KanR
183
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0124.gb
184
+ - id: ODC_0125
185
+ name: AB_T7
186
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0125.gb
187
+ - id: ODC_0126
188
+ name: AB_T7_lacO
189
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0126.gb
190
+ - id: ODC_0127
191
+ name: AB_pTac
192
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0127.gb
193
+ - id: ODC_0128
194
+ name: BT1_BCD2
195
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0128.gb
196
+ - id: ODC_0129
197
+ name: BT1_Riboj54_F1
198
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0129.gb
199
+ - id: ODC_0130
200
+ name: BT1_Riboj_B34
201
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0130.gb
202
+ - id: ODC_0131
203
+ name: BT1_BCD12
204
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0131.gb
205
+ - id: ODC_0132
206
+ name: BT1_BCD23
207
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0132.gb
208
+ - id: ODC_0133
209
+ name: BT1_BCD2_His
210
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0133.gb
211
+ - id: ODC_0134
212
+ name: BT1_RiboJ_B34_His
213
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0134.gb
214
+ - id: ODC_0135
215
+ name: BT1_BCD2_DsbA
216
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0135.gb
217
+ - id: ODC_0136
218
+ name: BT1_BCD2_OmpT
219
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0136.gb
220
+ - id: ODC_0137
221
+ name: BT1_BCD2_pelB
222
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0137.gb
223
+ - id: ODC_0138
224
+ name: T1T2_Calm
225
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0138.gb
226
+ - id: ODC_0139
227
+ name: T1T2_CBD
228
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0139.gb
229
+ - id: ODC_0140
230
+ name: T1T2_Cex
231
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0140.gb
232
+ - id: ODC_0141
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+ name: T1T2_MBP
234
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0141.gb
235
+ - id: ODC_0142
236
+ name: T1T2_R5
237
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0142.gb
238
+ - id: ODC_0143
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+ name: T1T2_GST
240
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0143.gb
241
+ - id: ODC_0144
242
+ name: T1T2_CipA
243
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0144.gb
244
+ - id: ODC_0145
245
+ name: T1T2_S-Tag
246
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0145.gb
247
+ - id: ODC_0146
248
+ name: T1T2_GB1
249
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0146.gb
250
+ - id: ODC_0147
251
+ name: T1T2_GS flexible
252
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0147.gb
253
+ - id: ODC_0148
254
+ name: T1T3_GS flexible
255
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0148.gb
256
+ - id: ODC_0149
257
+ name: T1C_GS flexible
258
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0149.gb
259
+ - id: ODC_0150
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+ name: T1C_His_TEVcut
261
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0150.gb
262
+ - id: ODC_0151
263
+ name: BT2_BCD2_His
264
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0151.gb
265
+ - id: ODC_0152
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+ name: BT2_RiboJ_B34
267
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0152.gb
268
+ - id: ODC_0153
269
+ name: BC_B0034
270
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0153.gb
271
+ - id: ODC_0154
272
+ name: BC_B0032
273
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0154.gb
274
+ - id: ODC_0155
275
+ name: BC_RiboJ_RBS64
276
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0155.gb
277
+ - id: ODC_0156
278
+ name: BC_RiboJ_B34
279
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0156.gb
280
+ - id: ODC_0157
281
+ name: BC_BCD23
282
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0157.gb
283
+ - id: ODC_0158
284
+ name: BC_BCD12
285
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0158.gb
286
+ - id: ODC_0159
287
+ name: BC_BCD2
288
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0159.gb
289
+ - id: ODC_0160
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+ name: T2C_GS flexible
291
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0160.gb
292
+ - id: ODC_0161
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+ name: T2C_TEVcut
294
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0161.gb
295
+ - id: ODC_0162
296
+ name: BC_BCD2_His_TEVcut
297
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0162.gb
298
+ - id: ODC_0163
299
+ name: BC_BCD2_His_fuGFP_TEVcut
300
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0163.gb
301
+ - id: ODC_0164
302
+ name: "T2T3_int_\u2206I"
303
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0164.gb
304
+ - id: ODC_0165
305
+ name: T2T3_SUMO
306
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0165.gb
307
+ - id: ODC_0166
308
+ name: T2T3_fuGFP
309
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0166.gb
310
+ - id: ODC_0167
311
+ name: T2T3_AmilCP
312
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0167.gb
313
+ - id: ODC_0168
314
+ name: T2T3_GS flexible
315
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0168.gb
316
+ - id: ODC_0169
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+ name: T3C_SUMO
318
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0169.gb
319
+ - id: ODC_0170
320
+ name: T3C_TEV
321
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0170.gb
322
+ - id: ODC_0171
323
+ name: "T3C_int_\u2206I"
324
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0171.gb
325
+ - id: ODC_0172
326
+ name: T3C_fuGFP
327
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0172.gb
328
+ - id: ODC_0173
329
+ name: T3C_GS flexible linker
330
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0173.gb
331
+ - id: ODC_0174
332
+ name: CD_OMMLV
333
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0174.gb
334
+ - id: ODC_0175
335
+ name: CD_HIVRT
336
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0175.gb
337
+ - id: ODC_0176
338
+ name: CD_Bst-LF
339
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0176.gb
340
+ - id: ODC_0177
341
+ name: CD_OpenVent
342
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0177.gb
343
+ - id: ODC_0178
344
+ name: CD_RNAseInhibitor
345
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0178.gb
346
+ - id: ODC_0179
347
+ name: CD_gp32
348
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0179.gb
349
+ - id: ODC_0180
350
+ name: CD_BsuLF
351
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0180.gb
352
+ - id: ODC_0181
353
+ name: CD_UvsY
354
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0181.gb
355
+ - id: ODC_0182
356
+ name: CD_UvsX
357
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0182.gb
358
+ - id: ODC_0183
359
+ name: CE_T7RNApol_Stop
360
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0183.gb
361
+ - id: ODC_0184
362
+ name: CD_PBCV-1_ligase
363
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0184.gb
364
+ - id: ODC_0185
365
+ name: CD_HRP
366
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0185.gb
367
+ - id: ODC_0186
368
+ name: CD_TEV_protease
369
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0186.gb
370
+ - id: ODC_0187
371
+ name: CD_SUMO_protease
372
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0187.gb
373
+ - id: ODC_0188
374
+ name: CD_Calmodulin
375
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0188.gb
376
+ - id: ODC_0189
377
+ name: CD_fuGFP
378
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0189.gb
379
+ - id: ODC_0190
380
+ name: CD_AmilCP
381
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0190.gb
382
+ - id: ODC_0191
383
+ name: CD_TthRNAseH
384
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0191.gb
385
+ - id: ODC_0192
386
+ name: CD_EcRNAseH
387
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0192.gb
388
+ - id: ODC_0193
389
+ name: DT4_Int_SaltS
390
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0193.gb
391
+ - id: ODC_0194
392
+ name: DT4_Int_ThiolS
393
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0194.gb
394
+ - id: ODC_0195
395
+ name: DT4_TEV
396
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0195.gb
397
+ - id: ODC_0196
398
+ name: DT4_fuGFP
399
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0196.gb
400
+ - id: ODC_0197
401
+ name: DT4_GS flexible linker
402
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0197.gb
403
+ - id: ODC_0198
404
+ name: DT5_TEVcut
405
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0198.gb
406
+ - id: ODC_0199
407
+ name: DF_TEVcut_His_Stop_TZ
408
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0199.gb
409
+ - id: ODC_0200
410
+ name: DF_TEVcut_fuGFP_His_Stop_TZ
411
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0200.gb
412
+ - id: ODC_0201
413
+ name: T4T5_Int_ThiolS
414
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0201.gb
415
+ - id: ODC_0202
416
+ name: T4T5_Int_SaltS
417
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0202.gb
418
+ - id: ODC_0203
419
+ name: T4T5_AmilCP
420
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0203.gb
421
+ - id: ODC_0204
422
+ name: T4T5_fuGFP
423
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0204.gb
424
+ - id: ODC_0205
425
+ name: T4T5_GS flexible
426
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0205.gb
427
+ - id: ODC_0206
428
+ name: T4E_3xStop
429
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0206.gb
430
+ - id: ODC_0207
431
+ name: T5E_6H
432
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0207.gb
433
+ - id: ODC_0208
434
+ name: T5E_Calm
435
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0208.gb
436
+ - id: ODC_0209
437
+ name: T5E_CBD
438
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0209.gb
439
+ - id: ODC_0210
440
+ name: T5E_Cex
441
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0210.gb
442
+ - id: ODC_0211
443
+ name: T5E_MBP
444
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0211.gb
445
+ - id: ODC_0212
446
+ name: T5E_R5
447
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0212.gb
448
+ - id: ODC_0213
449
+ name: T5E_CipA
450
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0213.gb
451
+ - id: ODC_0214
452
+ name: T5E_3xStop
453
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0214.gb
454
+ - id: ODC_0215
455
+ name: EF_ECK9600
456
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0215.gb
457
+ - id: ODC_0216
458
+ name: EF_T7term
459
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0216.gb
460
+ - id: ODC_0217
461
+ name: EF_TZ
462
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0217.gb
463
+ - id: ODC_0337
464
+ name: spisPink/spisCPBiobrickK1033925
465
+ path: Ecoli Protein Expression Toolkit/Plasmids_Genbank/ODC_0337.gb
466
+ Molecular Diagnostics Toolkit:
467
+ - id: ODC_0218
468
+ name: MERScontrol
469
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0218.gb
470
+ - id: ODC_0219
471
+ name: Pfu_Ssod7 HiFi
472
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0219.gb
473
+ - id: ODC_0220
474
+ name: gp32
475
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0220.gb
476
+ - id: ODC_0221
477
+ name: Ecoli_opt_RNAseInhib
478
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0221.gb
479
+ - id: ODC_0222
480
+ name: HIVRT
481
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0222.gb
482
+ - id: ODC_0223
483
+ name: OMMLV
484
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0223.gb
485
+ - id: ODC_0224
486
+ name: OpenVent
487
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0224.gb
488
+ - id: ODC_0225
489
+ name: RNAseInhib
490
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0225.gb
491
+ - id: ODC_0226
492
+ name: EcPPA
493
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0226.gb
494
+ - id: ODC_0227
495
+ name: orfA1
496
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0227.gb
497
+ - id: ODC_0228
498
+ name: orfA2
499
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0228.gb
500
+ - id: ODC_0229
501
+ name: orfB3
502
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0229.gb
503
+ - id: ODC_0230
504
+ name: orfE4
505
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0230.gb
506
+ - id: ODC_0231
507
+ name: orfN5
508
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0231.gb
509
+ - id: ODC_0232
510
+ name: SARSContol
511
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0232.gb
512
+ - id: ODC_0233
513
+ name: Bst-LF
514
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0233.gb
515
+ - id: ODC_0234
516
+ name: Bsu
517
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0234.gb
518
+ - id: ODC_0235
519
+ name: UvsX
520
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0235.gb
521
+ - id: ODC_0236
522
+ name: PBCV-1_ligase
523
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0236.gb
524
+ - id: ODC_0237
525
+ name: TthRNAseH
526
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0237.gb
527
+ - id: ODC_0238
528
+ name: EcRNAseH
529
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0238.gb
530
+ - id: ODC_0239
531
+ name: TEV
532
+ path: Molecular Diagnostics Toolkit/Plasmids_Genbank/ODC_0239.gb
533
+ Open Enzyme Collection:
534
+ - id: ODC_0007
535
+ name: "9\xB0N-7 DNA polymerase"
536
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0007.gb
537
+ - id: ODC_0008
538
+ name: DNA Polymerase I, Large (Klenow) Fragment
539
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0008.gb
540
+ - id: ODC_0009
541
+ name: "DNA Polymerase I, Large (Klenow) Fragment (3\u2032\u21925\u2032 exo-)"
542
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0009.gb
543
+ - id: ODC_0010
544
+ name: E. coli DNA Polymerase I
545
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0010.gb
546
+ - id: ODC_0011
547
+ name: KlenTaq1 polymerase
548
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0011.gb
549
+ - id: ODC_0012
550
+ name: KOD DNA polymerase
551
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0012.gb
552
+ - id: ODC_0013
553
+ name: Pwo DNA Polymerase
554
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0013.gb
555
+ - id: ODC_0014
556
+ name: "Pyrococcus Sp. Heat-Stable (exo\u2013) DNA Polymerase (Deep Vent\u2122 (exo\u2013\
557
+ ) DNA Polymerase at NEB)"
558
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0014.gb
559
+ - id: ODC_0015
560
+ name: "Pyrococcus Sp. Heat-Stable DNA Polymerase (Deep Vent\u2122 at NEB)"
561
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0015.gb
562
+ - id: ODC_0016
563
+ name: Taq DNA Polymerase
564
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0016.gb
565
+ - id: ODC_0017
566
+ name: "Tli DNA polymerase (exo-)(available from NEB as VentR\xAE (exo-) DNA Polymerase)"
567
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0017.gb
568
+ - id: ODC_0018
569
+ name: Tth DNA polymerase
570
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0018.gb
571
+ - id: ODC_0019
572
+ name: Bst DNA Polymerase, Full Length
573
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0019.gb
574
+ - id: ODC_0020
575
+ name: Bst DNA Polymerase, Large Fragment
576
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0020.gb
577
+ - id: ODC_0021
578
+ name: Bsu DNA Polymerase I, Large Fragment
579
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0021.gb
580
+ - id: ODC_0022
581
+ name: phi29 DNA Polymerase
582
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0022.gb
583
+ - id: ODC_0023
584
+ name: "9\xB0N-7 DNA Polymerase chain terminating (NEB > Therminator DNA Pol)"
585
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0023.gb
586
+ - id: ODC_0024
587
+ name: Sulfolobus DNA Polymerase IV
588
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0024.gb
589
+ - id: ODC_0025
590
+ name: T4 DNA Polymerase
591
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0025.gb
592
+ - id: ODC_0026
593
+ name: T7 DNA Polymerase (unmodified)
594
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0026.gb
595
+ - id: ODC_0027
596
+ name: T5 DNA Polymerase
597
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0027.gb
598
+ - id: ODC_0028
599
+ name: T4-DNA Ligase
600
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0028.gb
601
+ - id: ODC_0029
602
+ name: E. coli DNA Ligase
603
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0029.gb
604
+ - id: ODC_0030
605
+ name: DNA Lligase III
606
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0030.gb
607
+ - id: ODC_0031
608
+ name: DNA Ligase IV
609
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0031.gb
610
+ - id: ODC_0032
611
+ name: 9 Degrees North DNA Ligase
612
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0032.gb
613
+ - id: ODC_0033
614
+ name: Pfu DNA Ligase
615
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0033.gb
616
+ - id: ODC_0034
617
+ name: Taq DNA Ligase
618
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0034.gb
619
+ - id: ODC_0035
620
+ name: T4 RNA Ligase 1
621
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0035.gb
622
+ - id: ODC_0036
623
+ name: CIP (calf intestinal phosphatase)
624
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0036.gb
625
+ - id: ODC_0037
626
+ name: RNAse A
627
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0037.gb
628
+ - id: ODC_0038
629
+ name: RNAse H
630
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0038.gb
631
+ - id: ODC_0039
632
+ name: EcoRI
633
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0039.gb
634
+ - id: ODC_0040
635
+ name: EcoRI methyltransferase
636
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0040.gb
637
+ - id: ODC_0041
638
+ name: PstI
639
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0041.gb
640
+ - id: ODC_0042
641
+ name: PstI methyltransferase
642
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0042.gb
643
+ - id: ODC_0043
644
+ name: MMLV_RT (mut H)
645
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0043.gb
646
+ - id: ODC_0044
647
+ name: MMLV_RT (lack H)
648
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0044.gb
649
+ - id: ODC_0045
650
+ name: Thermus thermophilus (Tth) RT
651
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0045.gb
652
+ - id: ODC_0046
653
+ name: T3 RNA Polymerase
654
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0046.gb
655
+ - id: ODC_0047
656
+ name: T7 RNA Polymerase
657
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0047.gb
658
+ - id: ODC_0048
659
+ name: SP6 RNA Polymerase
660
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0048.gb
661
+ - id: ODC_0049
662
+ name: Eco31I
663
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0049.gb
664
+ - id: ODC_0050
665
+ name: Eco31IA methyltransferase
666
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0050.gb
667
+ - id: ODC_0051
668
+ name: Eco31IB methyltransferase
669
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0051.gb
670
+ - id: ODC_0052
671
+ name: SapI
672
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0052.gb
673
+ - id: ODC_0053
674
+ name: M1.SapI methyltransferase
675
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0053.gb
676
+ - id: ODC_0054
677
+ name: M2.SapI methyltransferase
678
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0054.gb
679
+ - id: ODC_0055
680
+ name: XbaI
681
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0055.gb
682
+ - id: ODC_0056
683
+ name: XbaI methyltransferase
684
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0056.gb
685
+ - id: ODC_0057
686
+ name: NotI
687
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0057.gb
688
+ - id: ODC_0058
689
+ name: NotI methyltransferase
690
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0058.gb
691
+ - id: ODC_0059
692
+ name: SfiI
693
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0059.gb
694
+ - id: ODC_0060
695
+ name: SfiI methyltransferase
696
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0060.gb
697
+ - id: ODC_0061
698
+ name: EcoRV
699
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0061.gb
700
+ - id: ODC_0062
701
+ name: EcoRV methyltransferase
702
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0062.gb
703
+ - id: ODC_0063
704
+ name: NcoI
705
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0063.gb
706
+ - id: ODC_0064
707
+ name: NcoI methyltransferase
708
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0064.gb
709
+ - id: ODC_0065
710
+ name: HindIII
711
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0065.gb
712
+ - id: ODC_0066
713
+ name: HindIII methyltransferase
714
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0066.gb
715
+ - id: ODC_0067
716
+ name: DpnI
717
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0067.gb
718
+ - id: ODC_0068
719
+ name: Bst HF
720
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0068.gb
721
+ - id: ODC_0069
722
+ name: ET SSB
723
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0069.gb
724
+ - id: ODC_0070
725
+ name: T5 Exonuclease
726
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0070.gb
727
+ - id: ODC_0071
728
+ name: HiFi Tth DNA Ligase
729
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0071.gb
730
+ - id: ODC_0072
731
+ name: Dm dNK
732
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0072.gb
733
+ - id: ODC_0073
734
+ name: TEV protease
735
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0073.gb
736
+ - id: ODC_0074
737
+ name: T4 PNK
738
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0074.gb
739
+ - id: ODC_0075
740
+ name: T4 BGT
741
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0075.gb
742
+ - id: ODC_0076
743
+ name: T7 Endonuclease I
744
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0076.gb
745
+ - id: ODC_0077
746
+ name: T4 Endonuclease V (T4 PDG)
747
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0077.gb
748
+ - id: ODC_0078
749
+ name: T4 g32
750
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0078.gb
751
+ - id: ODC_0079
752
+ name: P45
753
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0079.gb
754
+ - id: ODC_0080
755
+ name: Terminal transferase TdT (Bovine DNTT)
756
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0080.gb
757
+ - id: ODC_0081
758
+ name: DNA Topoisomerase 1B (Vaccinia Virus)
759
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0081.gb
760
+ - id: ODC_0082
761
+ name: lambda red operon
762
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0082.gb
763
+ - id: ODC_0083
764
+ name: UDG
765
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0083.gb
766
+ - id: ODC_0084
767
+ name: Fpg
768
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0084.gb
769
+ - id: ODC_0085
770
+ name: Endonuclease IV E. coli
771
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0085.gb
772
+ - id: ODC_0086
773
+ name: Endonuclease VIII E. coli
774
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0086.gb
775
+ - id: ODC_0087
776
+ name: Exonuclease III E. coli
777
+ path: Open Enzyme Collection/Plasmids_Genbank/ODC_0087.gb
778
+ Open Plasmids:
779
+ - id: ODC_0001
780
+ name: pInducible/pOpen_v4
781
+ path: Open Plasmids/Plasmids_Genbank/ODC_0001.gb
782
+ - id: ODC_0002
783
+ name: pBuild/pOpen_v3
784
+ path: Open Plasmids/Plasmids_Genbank/ODC_0002.gb
785
+ - id: ODC_0003
786
+ name: pYeast/pOpen_yeast
787
+ path: Open Plasmids/Plasmids_Genbank/ODC_0003.gb
788
+ - id: ODC_0004
789
+ name: pTi
790
+ path: Open Plasmids/Plasmids_Genbank/ODC_0004.gb
791
+ - id: ODC_0005
792
+ name: pTiR
793
+ path: Open Plasmids/Plasmids_Genbank/ODC_0005.gb
794
+ - id: ODC_0006
795
+ name: pTiER
796
+ path: Open Plasmids/Plasmids_Genbank/ODC_0006.gb
797
+ Open Reporters Collection:
798
+ - id: ODC_0088
799
+ name: cjBlue/ BioBrick K592011
800
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0088.gb
801
+ - id: ODC_0089
802
+ name: gfasPurple/gfasCP Biobrick K1033918
803
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0089.gb
804
+ - id: ODC_0090
805
+ name: meffCFP
806
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0090.gb
807
+ - id: ODC_0091
808
+ name: mmilCFP
809
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0091.gb
810
+ - id: ODC_0092
811
+ name: meleCFP
812
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0092.gb
813
+ - id: ODC_0093
814
+ name: efasCFP
815
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0093.gb
816
+ - id: ODC_0094
817
+ name: aacuGFP1
818
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0094.gb
819
+ - id: ODC_0095
820
+ name: aacuGFP2
821
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0095.gb
822
+ - id: ODC_0096
823
+ name: afraGFP
824
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0096.gb
825
+ - id: ODC_0097
826
+ name: amilGFP Biobrick K592010
827
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0097.gb
828
+ - id: ODC_0098
829
+ name: eechGFP1
830
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0098.gb
831
+ - id: ODC_0099
832
+ name: eechGFP2
833
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0099.gb
834
+ - id: ODC_0100
835
+ name: eechGFP3
836
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0100.gb
837
+ - id: ODC_0101
838
+ name: efasGFP
839
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0101.gb
840
+ - id: ODC_0102
841
+ name: gfasGFP
842
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0102.gb
843
+ - id: ODC_0103
844
+ name: plamGFP
845
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0103.gb
846
+ - id: ODC_0104
847
+ name: amilRFP
848
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0104.gb
849
+ - id: ODC_0105
850
+ name: meffRed/meffRFP Biobricks K592012
851
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0105.gb
852
+ - id: ODC_0106
853
+ name: pporRFP
854
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0106.gb
855
+ - id: ODC_0107
856
+ name: meleRFP
857
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0107.gb
858
+ - id: ODC_0108
859
+ name: scubRFP
860
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0108.gb
861
+ - id: ODC_0109
862
+ name: eforRed/eforCP Biobrick K592012
863
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0109.gb
864
+ - id: ODC_0110
865
+ name: amajLime/amajCFP/amFP486 BioBrick K1033916
866
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0110.gb
867
+ - id: ODC_0111
868
+ name: EiraCFP Biobrick J97000
869
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0111.gb
870
+ - id: ODC_0112
871
+ name: HRP
872
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0112.gb
873
+ - id: ODC_0113
874
+ name: Firefly Luciferase [Photinus pyralis] (Fluc)
875
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0113.gb
876
+ - id: ODC_0114
877
+ name: Luciferase [Luciola cruciata] (Japanese firefly)
878
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0114.gb
879
+ - id: ODC_0115
880
+ name: Renilla luciferase
881
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0115.gb
882
+ - id: ODC_0116
883
+ name: beta-lactamase
884
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0116.gb
885
+ - id: ODC_0117
886
+ name: Calf Intestine Alkaline phosphatase (CIAP)
887
+ path: Open Reporters Collection/Plasmids_Genbank/ODC_0117.gb
888
+ Open Yeast Collection:
889
+ - id: ODC_0240
890
+ name: Sc-pAdh1
891
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0240.gb
892
+ - id: ODC_0241
893
+ name: Sc-pCCW12
894
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0241.gb
895
+ - id: ODC_0242
896
+ name: Sc-pCUP1
897
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0242.gb
898
+ - id: ODC_0243
899
+ name: Sc-pCYC1
900
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0243.gb
901
+ - id: ODC_0244
902
+ name: Sc-pHis3
903
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0244.gb
904
+ - id: ODC_0245
905
+ name: Sc-pLeu2
906
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0245.gb
907
+ - id: ODC_0246
908
+ name: Sc-pMF2
909
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0246.gb
910
+ - id: ODC_0247
911
+ name: Sc-pMFA1
912
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0247.gb
913
+ - id: ODC_0248
914
+ name: Sc-pMFalpha2
915
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0248.gb
916
+ - id: ODC_0249
917
+ name: Sc-pRPL18B
918
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0249.gb
919
+ - id: ODC_0250
920
+ name: Sc-pSAC6
921
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0250.gb
922
+ - id: ODC_0251
923
+ name: Sc-pSte5
924
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0251.gb
925
+ - id: ODC_0252
926
+ name: Sc-pTDH3
927
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0252.gb
928
+ - id: ODC_0253
929
+ name: Sc-pTrp1
930
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0253.gb
931
+ - id: ODC_0254
932
+ name: Sc-pUra3
933
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0254.gb
934
+ - id: ODC_0255
935
+ name: AB_Sc-pCCW12
936
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0255.gb
937
+ - id: ODC_0256
938
+ name: AB_Sc-pCYC1
939
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0256.gb
940
+ - id: ODC_0257
941
+ name: AB_Pp-pGAP
942
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0257.gb
943
+ - id: ODC_0258
944
+ name: AB_Pp-pAOX1
945
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0258.gb
946
+ - id: ODC_0259
947
+ name: ScLYS2
948
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0259.gb
949
+ - id: ODC_0260
950
+ name: ScMET17
951
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0260.gb
952
+ - id: ODC_0261
953
+ name: ScAUR1
954
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0261.gb
955
+ - id: ODC_0262
956
+ name: Cre
957
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0262.gb
958
+ - id: ODC_0263
959
+ name: FLP
960
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0263.gb
961
+ - id: ODC_0264
962
+ name: GPP synthase
963
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0264.gb
964
+ - id: ODC_0265
965
+ name: GGPP synthase
966
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0265.gb
967
+ - id: ODC_0266
968
+ name: FPP synthase
969
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0266.gb
970
+ - id: ODC_0267
971
+ name: 4S-limonene-synthase
972
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0267.gb
973
+ - id: ODC_0268
974
+ name: limonene-3-hydroxylase
975
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0268.gb
976
+ - id: ODC_0269
977
+ name: S-linalool synthase
978
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0269.gb
979
+ - id: ODC_0270
980
+ name: carveol dehydrogenase
981
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0270.gb
982
+ - id: ODC_0271
983
+ name: ScGal4-DNA-AD
984
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0271.gb
985
+ - id: ODC_0272
986
+ name: ScGal4-DNA-BD
987
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0272.gb
988
+ - id: ODC_0273
989
+ name: N1N2_SV40_NLS
990
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0273.gb
991
+ - id: ODC_0274
992
+ name: Pp_aMF_sec_tag
993
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0274.gb
994
+ - id: ODC_0275
995
+ name: Pp_aMF_noEAEA_sec_tag
996
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0275.gb
997
+ - id: ODC_0276
998
+ name: Sc-tUBX6
999
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0276.gb
1000
+ - id: ODC_0277
1001
+ name: Sc-tENO1
1002
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0277.gb
1003
+ - id: ODC_0278
1004
+ name: Sc-tENO2
1005
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0278.gb
1006
+ - id: ODC_0279
1007
+ name: Sc-tPRM9
1008
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0279.gb
1009
+ - id: ODC_0280
1010
+ name: Sc-tSSA1
1011
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0280.gb
1012
+ - id: ODC_0281
1013
+ name: Sc-tTDH1
1014
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0281.gb
1015
+ - id: ODC_0282
1016
+ name: Pp-tAOX1
1017
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0282.gb
1018
+ - id: ODC_0283
1019
+ name: AConL-start-rev
1020
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0283.gb
1021
+ - id: ODC_0284
1022
+ name: AConL-start
1023
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0284.gb
1024
+ - id: ODC_0285
1025
+ name: AConL1
1026
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0285.gb
1027
+ - id: ODC_0286
1028
+ name: AConL2
1029
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0286.gb
1030
+ - id: ODC_0287
1031
+ name: AConL3
1032
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0287.gb
1033
+ - id: ODC_0288
1034
+ name: AConL4
1035
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0288.gb
1036
+ - id: ODC_0289
1037
+ name: AConL5
1038
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0289.gb
1039
+ - id: ODC_0290
1040
+ name: AConR1
1041
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0290.gb
1042
+ - id: ODC_0291
1043
+ name: AConR2
1044
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0291.gb
1045
+ - id: ODC_0292
1046
+ name: AConR3
1047
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0292.gb
1048
+ - id: ODC_0293
1049
+ name: AConR4
1050
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0293.gb
1051
+ - id: ODC_0294
1052
+ name: AConR5
1053
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0294.gb
1054
+ - id: ODC_0295
1055
+ name: AConR-end
1056
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0295.gb
1057
+ - id: ODC_0296
1058
+ name: AConR-end-rev
1059
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0296.gb
1060
+ - id: ODC_0297
1061
+ name: ScHR5'-LEU2
1062
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0297.gb
1063
+ - id: ODC_0298
1064
+ name: ScHR3'-LEU2
1065
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0298.gb
1066
+ - id: ODC_0299
1067
+ name: ScHR5'-URA3
1068
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0299.gb
1069
+ - id: ODC_0300
1070
+ name: ScHR3'-URA3
1071
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0300.gb
1072
+ - id: ODC_0301
1073
+ name: ScHR5'-HO
1074
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0301.gb
1075
+ - id: ODC_0302
1076
+ name: ScHR3'-HO
1077
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0302.gb
1078
+ - id: ODC_0303
1079
+ name: PpHR5'-NTS
1080
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0303.gb
1081
+ - id: ODC_0304
1082
+ name: PpHR3'-NTS
1083
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0304.gb
1084
+ - id: ODC_0305
1085
+ name: PpHR5'-RGI2
1086
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0305.gb
1087
+ - id: ODC_0306
1088
+ name: PpHR3'-RGI2
1089
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0306.gb
1090
+ - id: ODC_0307
1091
+ name: PpHR5'-ENO
1092
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0307.gb
1093
+ - id: ODC_0308
1094
+ name: PpHR3'-ENO
1095
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0308.gb
1096
+ - id: ODC_0309
1097
+ name: PpHR5'-AOXTT
1098
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0309.gb
1099
+ - id: ODC_0310
1100
+ name: PpHR3'-AOXTT
1101
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0310.gb
1102
+ - id: ODC_0311
1103
+ name: Sc2micron
1104
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0311.gb
1105
+ - id: ODC_0312
1106
+ name: ScARS_CEN
1107
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0312.gb
1108
+ - id: ODC_0313
1109
+ name: Pichia PARS
1110
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0313.gb
1111
+ - id: ODC_0314
1112
+ name: oriT
1113
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0314.gb
1114
+ - id: ODC_0315
1115
+ name: ScADE2-marker
1116
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0315.gb
1117
+ - id: ODC_0316
1118
+ name: ScHIS3-marker
1119
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0316.gb
1120
+ - id: ODC_0317
1121
+ name: ScHygro-marker
1122
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0317.gb
1123
+ - id: ODC_0318
1124
+ name: ScKanR-marker
1125
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0318.gb
1126
+ - id: ODC_0319
1127
+ name: ScLEU2-marker
1128
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0319.gb
1129
+ - id: ODC_0320
1130
+ name: ScNAT-marker
1131
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0320.gb
1132
+ - id: ODC_0321
1133
+ name: ScTRP1-marker
1134
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0321.gb
1135
+ - id: ODC_0322
1136
+ name: ScURA3-marker
1137
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0322.gb
1138
+ - id: ODC_0323
1139
+ name: ScZeo-marker
1140
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0323.gb
1141
+ - id: ODC_0324
1142
+ name: OYC-bridge-AGAC-CGAA
1143
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0324.gb
1144
+ - id: ODC_0325
1145
+ name: OYC-bridge-AGAC-GCAA
1146
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0325.gb
1147
+ - id: ODC_0326
1148
+ name: OYC-CamR
1149
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0326.gb
1150
+ - id: ODC_0327
1151
+ name: OYC-SpecR
1152
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0327.gb
1153
+ - id: ODC_0328
1154
+ name: OYC-high-copy-origin
1155
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0328.gb
1156
+ - id: ODC_0329
1157
+ name: OYC-eforRed-dropout
1158
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0329.gb
1159
+ - id: ODC_0330
1160
+ name: pWV01-ori
1161
+ path: Open Yeast Collection/Plasmids_Genbank/ODC_0330.gb