omniopt2 7326__py3-none-any.whl → 7332__py3-none-any.whl

.omniopt.py

@@ -1847,6 +1847,48 @@ def try_saving_to_db() -> None:
     except Exception as e:
         print_debug(f"Failed trying to save sqlite3-DB: {e}")
 
+@beartype
+@beartype
+def merge_with_job_infos(pd_frame: pd.DataFrame) -> pd.DataFrame:
+    """
+    Merge pd_frame with job_infos.csv on 'trial_index'.
+    Add new columns from job_infos.csv directly after 'trial_index'.
+    """
+    job_infos_path = os.path.join(get_current_run_folder(), "job_infos.csv")
+    if not os.path.exists(job_infos_path):
+        return pd_frame
+
+    job_df = pd.read_csv(job_infos_path)
+
+    if 'trial_index' not in pd_frame.columns or 'trial_index' not in job_df.columns:
+        raise ValueError("Both DataFrames must contain a 'trial_index' column.")
+
+    # Filter job_df nur auf trial_index, die in pd_frame sind
+    job_df_filtered = job_df[job_df['trial_index'].isin(pd_frame['trial_index'])]
+
+    # Neue Spalten (außer trial_index), die noch nicht in pd_frame sind
+    new_cols = [col for col in job_df_filtered.columns if col != 'trial_index' and col not in pd_frame.columns]
+
+    # job_df nur mit trial_index und den neuen Spalten
+    job_df_reduced = job_df_filtered[['trial_index'] + new_cols]
+
+    # Merge (left join) auf trial_index
+    merged = pd.merge(pd_frame, job_df_reduced, on='trial_index', how='left')
+
+    # Spaltenreihenfolge neu anordnen:
+    # 1) trial_index
+    # 2) neue Spalten aus job_infos.csv
+    # 3) alle anderen Spalten aus pd_frame außer trial_index
+
+    # Alle Spalten aus pd_frame außer trial_index
+    old_cols = [col for col in pd_frame.columns if col != 'trial_index']
+
+    new_order = ['trial_index'] + new_cols + old_cols
+
+    merged = merged[new_order]
+
+    return merged
+
 @beartype
 def save_results_csv() -> Optional[str]:
     if args.dryrun:
@@ -1867,6 +1909,9 @@ def save_results_csv() -> Optional[str]:
         ax_client.experiment.fetch_data()
 
         pd_frame = ax_client.get_trials_data_frame()
+
+        pd_frame = merge_with_job_infos(pd_frame)
+
         pd_frame.to_csv(pd_csv, index=False, float_format="%.30f")
 
         json_snapshot = ax_client.to_json_snapshot()
@@ -3563,15 +3608,17 @@ def write_job_infos_csv(parameters: dict, stdout: Optional[str], program_string_
                         exit_code: Optional[int], _signal: Optional[int],
                         result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]],
                         start_time: Union[int, float], end_time: Union[int, float],
-                        run_time: Union[float, int]) -> None:
-    _write_job_infos_csv_main(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time)
+                        run_time: Union[float, int],
+                        trial_index: int) -> None:
+    _write_job_infos_csv_main(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time, trial_index)
 
 @beartype
 def _write_job_infos_csv_main(parameters: dict, stdout: Optional[str], program_string_with_params: str,
                               exit_code: Optional[int], _signal: Optional[int],
                               result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]],
                               start_time: Union[int, float], end_time: Union[int, float],
-                              run_time: Union[float, int]) -> None:
+                              run_time: Union[float, int],
+                              trial_index: int) -> None:
     str_parameters_values = _write_job_infos_csv_parameters_to_str(parameters)
     extra_vars_names, extra_vars_values = _write_job_infos_csv_extract_extra_vars(stdout)
     extra_vars_names, extra_vars_values = _write_job_infos_csv_add_slurm_job_id(extra_vars_names, extra_vars_values)
@@ -3586,6 +3633,9 @@ def _write_job_infos_csv_main(parameters: dict, stdout: Optional[str], program_s
     headline = _write_job_infos_csv_replace_none_with_str(headline)
     values = _write_job_infos_csv_replace_none_with_str(values)
 
+    headline = ["trial_index", *headline]
+    values = [trial_index, *values]
+
     run_folder = get_current_run_folder()
     if run_folder is not None and os.path.exists(run_folder):
         try:
@@ -3757,7 +3807,7 @@ def print_stdout_and_stderr(stdout: Optional[str], stderr: Optional[str]) -> Non
             original_print("stderr was empty")
 
 @beartype
-def _evaluate_print_stuff(parameters: dict, program_string_with_params: str, stdout: Optional[str], stderr: Optional[str], exit_code: Optional[int], _signal: Optional[int], result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]], start_time: Union[float, int], end_time: Union[float, int], run_time: Union[float, int], final_result: dict) -> None:
+def _evaluate_print_stuff(parameters: dict, program_string_with_params: str, stdout: Optional[str], stderr: Optional[str], exit_code: Optional[int], _signal: Optional[int], result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]], start_time: Union[float, int], end_time: Union[float, int], run_time: Union[float, int], final_result: dict, trial_index: int) -> None:
     if not args.tests:
         original_print(f"Parameters: {json.dumps(parameters)}")
 
@@ -3772,7 +3822,7 @@ def _evaluate_print_stuff(parameters: dict, program_string_with_params: str, std
 
         original_print(f"Final-results: {final_result}")
 
-    write_job_infos_csv(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time)
+    write_job_infos_csv(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time, trial_index)
 
     if not args.tests:
         original_print(f"EXIT_CODE: {exit_code}")
@@ -3930,7 +3980,10 @@ def pretty_process_output(stdout_path: str, stderr_path: str, exit_code: Optiona
         console.print("[dim]No output captured.[/dim]")
 
 @beartype
-def evaluate(parameters: dict) -> Optional[Union[int, float, Dict[str, Optional[Union[int, float, Tuple]]], List[float]]]:
+def evaluate(parameters_with_trial_index: dict) -> Optional[Union[int, float, Dict[str, Optional[Union[int, float, Tuple]]], List[float]]]:
+    parameters = parameters_with_trial_index["params"]
+    trial_index = parameters_with_trial_index["trial_idx"]
+
     start_nvidia_smi_thread()
     return_in_case_of_error: dict = get_return_in_case_of_errors()
 
@@ -3974,7 +4027,8 @@ def evaluate(parameters: dict) -> Optional[Union[int, float, Dict[str, Optional[
                 start_time,
                 end_time,
                 end_time - start_time,
-                final_result
+                final_result,
+                trial_index
             )
 
         except tuple(signal_messages.values()) as sig:
@@ -6986,7 +7040,7 @@ def is_already_in_defective_nodes(hostname: str) -> bool:
 @beartype
 def orchestrator_start_trial(params_from_out_file: Union[dict, str], trial_index: int) -> None:
     if executor and ax_client:
-        new_job = executor.submit(evaluate, params_from_out_file)
+        new_job = executor.submit(evaluate, {"params": params_from_out_file, "trial_idx": trial_index})
         submitted_jobs(1)
 
         _trial = ax_client.get_trial(trial_index)
@@ -7136,7 +7190,7 @@ def execute_evaluation(_params: list) -> Optional[int]:
 
     try:
         initialize_job_environment()
-        new_job = executor.submit(evaluate, parameters)
+        new_job = executor.submit(evaluate, {"params": parameters, "trial_idx": trial_index})
         submitted_jobs(1)
 
         print_debug(f"execute_evaluation: appending job {new_job} to global_vars['jobs'], trial_index: {trial_index}")
@@ -10427,13 +10481,13 @@ Exit-Code: 159
 
     nr_errors += is_equal(
             "evaluate({'x': 123})",
-            json.dumps(evaluate({'x': 123.0})),
+            json.dumps(evaluate({"params": {'x': 123.0}, "trial_idx": 0})),
             json.dumps({'RESULT': 123.0})
     )
 
     nr_errors += is_equal(
             "evaluate({'x': -0.05})",
-            json.dumps(evaluate({'x': -0.05})),
+            json.dumps(evaluate({"params": {'x': -0.05}, "trial_idx": 0})),
             json.dumps({'RESULT': -0.05})
     )
 

{omniopt2-7326.data → omniopt2-7332.data}/data/bin/.omniopt.py

@@ -1847,6 +1847,48 @@ def try_saving_to_db() -> None:
     except Exception as e:
         print_debug(f"Failed trying to save sqlite3-DB: {e}")
 
+@beartype
+@beartype
+def merge_with_job_infos(pd_frame: pd.DataFrame) -> pd.DataFrame:
+    """
+    Merge pd_frame with job_infos.csv on 'trial_index'.
+    Add new columns from job_infos.csv directly after 'trial_index'.
+    """
+    job_infos_path = os.path.join(get_current_run_folder(), "job_infos.csv")
+    if not os.path.exists(job_infos_path):
+        return pd_frame
+
+    job_df = pd.read_csv(job_infos_path)
+
+    if 'trial_index' not in pd_frame.columns or 'trial_index' not in job_df.columns:
+        raise ValueError("Both DataFrames must contain a 'trial_index' column.")
+
+    # Filter job_df nur auf trial_index, die in pd_frame sind
+    job_df_filtered = job_df[job_df['trial_index'].isin(pd_frame['trial_index'])]
+
+    # Neue Spalten (außer trial_index), die noch nicht in pd_frame sind
+    new_cols = [col for col in job_df_filtered.columns if col != 'trial_index' and col not in pd_frame.columns]
+
+    # job_df nur mit trial_index und den neuen Spalten
+    job_df_reduced = job_df_filtered[['trial_index'] + new_cols]
+
+    # Merge (left join) auf trial_index
+    merged = pd.merge(pd_frame, job_df_reduced, on='trial_index', how='left')
+
+    # Spaltenreihenfolge neu anordnen:
+    # 1) trial_index
+    # 2) neue Spalten aus job_infos.csv
+    # 3) alle anderen Spalten aus pd_frame außer trial_index
+
+    # Alle Spalten aus pd_frame außer trial_index
+    old_cols = [col for col in pd_frame.columns if col != 'trial_index']
+
+    new_order = ['trial_index'] + new_cols + old_cols
+
+    merged = merged[new_order]
+
+    return merged
+
 @beartype
 def save_results_csv() -> Optional[str]:
     if args.dryrun:
@@ -1867,6 +1909,9 @@ def save_results_csv() -> Optional[str]:
         ax_client.experiment.fetch_data()
 
         pd_frame = ax_client.get_trials_data_frame()
+
+        pd_frame = merge_with_job_infos(pd_frame)
+
         pd_frame.to_csv(pd_csv, index=False, float_format="%.30f")
 
         json_snapshot = ax_client.to_json_snapshot()
@@ -3563,15 +3608,17 @@ def write_job_infos_csv(parameters: dict, stdout: Optional[str], program_string_
                         exit_code: Optional[int], _signal: Optional[int],
                         result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]],
                         start_time: Union[int, float], end_time: Union[int, float],
-                        run_time: Union[float, int]) -> None:
-    _write_job_infos_csv_main(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time)
+                        run_time: Union[float, int],
+                        trial_index: int) -> None:
+    _write_job_infos_csv_main(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time, trial_index)
 
 @beartype
 def _write_job_infos_csv_main(parameters: dict, stdout: Optional[str], program_string_with_params: str,
                               exit_code: Optional[int], _signal: Optional[int],
                               result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]],
                               start_time: Union[int, float], end_time: Union[int, float],
-                              run_time: Union[float, int]) -> None:
+                              run_time: Union[float, int],
+                              trial_index: int) -> None:
     str_parameters_values = _write_job_infos_csv_parameters_to_str(parameters)
     extra_vars_names, extra_vars_values = _write_job_infos_csv_extract_extra_vars(stdout)
     extra_vars_names, extra_vars_values = _write_job_infos_csv_add_slurm_job_id(extra_vars_names, extra_vars_values)
@@ -3586,6 +3633,9 @@ def _write_job_infos_csv_main(parameters: dict, stdout: Optional[str], program_s
     headline = _write_job_infos_csv_replace_none_with_str(headline)
     values = _write_job_infos_csv_replace_none_with_str(values)
 
+    headline = ["trial_index", *headline]
+    values = [trial_index, *values]
+
     run_folder = get_current_run_folder()
     if run_folder is not None and os.path.exists(run_folder):
         try:
@@ -3757,7 +3807,7 @@ def print_stdout_and_stderr(stdout: Optional[str], stderr: Optional[str]) -> Non
             original_print("stderr was empty")
 
 @beartype
-def _evaluate_print_stuff(parameters: dict, program_string_with_params: str, stdout: Optional[str], stderr: Optional[str], exit_code: Optional[int], _signal: Optional[int], result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]], start_time: Union[float, int], end_time: Union[float, int], run_time: Union[float, int], final_result: dict) -> None:
+def _evaluate_print_stuff(parameters: dict, program_string_with_params: str, stdout: Optional[str], stderr: Optional[str], exit_code: Optional[int], _signal: Optional[int], result: Optional[Union[Dict[str, Optional[float]], List[float], int, float]], start_time: Union[float, int], end_time: Union[float, int], run_time: Union[float, int], final_result: dict, trial_index: int) -> None:
     if not args.tests:
         original_print(f"Parameters: {json.dumps(parameters)}")
 
@@ -3772,7 +3822,7 @@ def _evaluate_print_stuff(parameters: dict, program_string_with_params: str, std
 
         original_print(f"Final-results: {final_result}")
 
-    write_job_infos_csv(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time)
+    write_job_infos_csv(parameters, stdout, program_string_with_params, exit_code, _signal, result, start_time, end_time, run_time, trial_index)
 
     if not args.tests:
         original_print(f"EXIT_CODE: {exit_code}")
@@ -3930,7 +3980,10 @@ def pretty_process_output(stdout_path: str, stderr_path: str, exit_code: Optiona
         console.print("[dim]No output captured.[/dim]")
 
 @beartype
-def evaluate(parameters: dict) -> Optional[Union[int, float, Dict[str, Optional[Union[int, float, Tuple]]], List[float]]]:
+def evaluate(parameters_with_trial_index: dict) -> Optional[Union[int, float, Dict[str, Optional[Union[int, float, Tuple]]], List[float]]]:
+    parameters = parameters_with_trial_index["params"]
+    trial_index = parameters_with_trial_index["trial_idx"]
+
     start_nvidia_smi_thread()
     return_in_case_of_error: dict = get_return_in_case_of_errors()
 
@@ -3974,7 +4027,8 @@ def evaluate(parameters: dict) -> Optional[Union[int, float, Dict[str, Optional[
                 start_time,
                 end_time,
                 end_time - start_time,
-                final_result
+                final_result,
+                trial_index
             )
 
         except tuple(signal_messages.values()) as sig:
@@ -6986,7 +7040,7 @@ def is_already_in_defective_nodes(hostname: str) -> bool:
 @beartype
 def orchestrator_start_trial(params_from_out_file: Union[dict, str], trial_index: int) -> None:
     if executor and ax_client:
-        new_job = executor.submit(evaluate, params_from_out_file)
+        new_job = executor.submit(evaluate, {"params": params_from_out_file, "trial_idx": trial_index})
         submitted_jobs(1)
 
         _trial = ax_client.get_trial(trial_index)
@@ -7136,7 +7190,7 @@ def execute_evaluation(_params: list) -> Optional[int]:
 
     try:
         initialize_job_environment()
-        new_job = executor.submit(evaluate, parameters)
+        new_job = executor.submit(evaluate, {"params": parameters, "trial_idx": trial_index})
         submitted_jobs(1)
 
         print_debug(f"execute_evaluation: appending job {new_job} to global_vars['jobs'], trial_index: {trial_index}")
@@ -10427,13 +10481,13 @@ Exit-Code: 159
 
     nr_errors += is_equal(
             "evaluate({'x': 123})",
-            json.dumps(evaluate({'x': 123.0})),
+            json.dumps(evaluate({"params": {'x': 123.0}, "trial_idx": 0})),
             json.dumps({'RESULT': 123.0})
     )
 
     nr_errors += is_equal(
             "evaluate({'x': -0.05})",
-            json.dumps(evaluate({'x': -0.05})),
+            json.dumps(evaluate({"params": {'x': -0.05}, "trial_idx": 0})),
             json.dumps({'RESULT': -0.05})
     )
 

{omniopt2-7326.dist-info → omniopt2-7332.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: omniopt2
-Version: 7326
+Version: 7332
 Summary: Automatic highly parallelized hyperparameter optimizer based on Ax/Botorch
 Home-page: https://scads.ai/transfer-2/verfuegbare-software-dienste-en/omniopt/
 Author: Norman Koch

{omniopt2-7326.dist-info → omniopt2-7332.dist-info}/RECORD

@@ -3,7 +3,7 @@
 .general.sh,sha256=uyGMN8xNToQ0v50KoiYxm6jRmgf0orroOaodM_Nuq30,2107
 .gitignore,sha256=OMaFWOR6wxjAlI85rF3euQcjQFFAl1F34abZkltKnaU,3714
 .helpers.py,sha256=6uoxzpi8zfvvQy16LpGkIC1OzvDC8TR8luAOX1iW1OM,30679
-.omniopt.py,sha256=oMlIRHR80CQZV8vGqrCIgEResEsIfx5zn_5nrrlNcEk,403015
+.omniopt.py,sha256=-qQZOMANemDghAOrRS7o9TKXkiT9XE5udCdRI_qcQfc,405119
 .omniopt_plot_cpu_ram_usage.py,sha256=DbOAmdrbcZtsMnHJgHfeRngjtv6zX5J0axyua_dYezc,3932
 .omniopt_plot_general.py,sha256=ZERZJkvVOoJhi7SszmTF1Iln-_08_0Aki48u3LHUW-k,6809
 .omniopt_plot_gpu_usage.py,sha256=ojxVicwSoiyl7f3c-6lLuT2EpyPcSJKEcbp75LgDY2k,5107
@@ -26,44 +26,44 @@ omniopt_docker,sha256=LWVUeyvmA5AKqAHiH9jBUkR5uZ6AHMnSy0eET7mK6E4,3602
 omniopt_evaluate,sha256=9oBh0_ikCuIz_aJQZrN0j39NDiIDYoSvEFmSVIoFjJE,23842
 omniopt_plot,sha256=Z8ZR10p-ZRSgMeVPO-wVCJ8lk-LQtntjZ9Bk9RifCIs,13360
 omniopt_share,sha256=PiO7Vt-dL5aC2uAZZZEYlNbyGjkyMUSeWVoiIURjr3k,13999
-pyproject.toml,sha256=dgPTU1FLgWXty6bZjIwRFRobls97Kds1Wf_1p70CIOM,397
+pyproject.toml,sha256=OeNLrIgF1RzdUhSFZD2KRSjSBRf0IGxGBip3sXf3Alc,397
 requirements.txt,sha256=73KRc-JrFmFO02-Uy_Py88kt6pLDHL6BK0xNWstU_lE,313
 setup.cfg,sha256=HEc8uu6NpfxG5_AVh5SvXOpEFMNKPPPxgMIAH144vT4,38
 test_requirements.txt,sha256=hHblJ3DNG2Va76G-dV7ugDhKCc6ZmkpgiUVC-g1exsQ,494
-omniopt2-7326.data/data/bin/.colorfunctions.sh,sha256=xxc08V3Fh_0Je20fkJMRO14u9VCSvMyOiMaDfioEyCY,1098
-omniopt2-7326.data/data/bin/.general.sh,sha256=uyGMN8xNToQ0v50KoiYxm6jRmgf0orroOaodM_Nuq30,2107
-omniopt2-7326.data/data/bin/.helpers.py,sha256=6uoxzpi8zfvvQy16LpGkIC1OzvDC8TR8luAOX1iW1OM,30679
-omniopt2-7326.data/data/bin/.omniopt.py,sha256=oMlIRHR80CQZV8vGqrCIgEResEsIfx5zn_5nrrlNcEk,403015
-omniopt2-7326.data/data/bin/.omniopt_plot_cpu_ram_usage.py,sha256=DbOAmdrbcZtsMnHJgHfeRngjtv6zX5J0axyua_dYezc,3932
-omniopt2-7326.data/data/bin/.omniopt_plot_general.py,sha256=ZERZJkvVOoJhi7SszmTF1Iln-_08_0Aki48u3LHUW-k,6809
-omniopt2-7326.data/data/bin/.omniopt_plot_gpu_usage.py,sha256=ojxVicwSoiyl7f3c-6lLuT2EpyPcSJKEcbp75LgDY2k,5107
-omniopt2-7326.data/data/bin/.omniopt_plot_kde.py,sha256=uRLWr72TDKvj3AqJ0O0AvkKZ1ok1O1QpXnbfQQdo0nA,6873
-omniopt2-7326.data/data/bin/.omniopt_plot_scatter.py,sha256=-amqmLR_YLCbHImLPh6gwVFv8iiVnXME544XHsRVCuw,8422
-omniopt2-7326.data/data/bin/.omniopt_plot_scatter_generation_method.py,sha256=rgKY_w1E516c9UucVaEvaKd8tCnoUq9xg-RrYSDzYEQ,4289
-omniopt2-7326.data/data/bin/.omniopt_plot_scatter_hex.py,sha256=w1L5gL6Bc_QudoSJi2lxEVvF17Apjjb3l2T-lXGnsUg,10279
-omniopt2-7326.data/data/bin/.omniopt_plot_time_and_exit_code.py,sha256=hC4RFDiJN_UImezFR6M5uVF-QKDqMDpq6R5DIg7dDDc,6463
-omniopt2-7326.data/data/bin/.omniopt_plot_trial_index_result.py,sha256=5DmqZAQO_PFmzdap-TIhSMAshRXpOHQacnHAtjwnzN4,4629
-omniopt2-7326.data/data/bin/.omniopt_plot_worker.py,sha256=VuluQq4W6KRR5RU08dxmDSFk5mbfDRkRJQFwwcLgAGw,4524
-omniopt2-7326.data/data/bin/.random_generator.py,sha256=ezBBUXpez_QaGdpCglMcJ0KZPdQP0XdX5gnLzO1xhwU,2987
-omniopt2-7326.data/data/bin/.shellscript_functions,sha256=anHc5T0Lm_BzTZTzEIp7cIICu5zdXj1FKL3LnODmHeE,13610
-omniopt2-7326.data/data/bin/.tpe.py,sha256=Yd9s-ixCbWxTd3x0O1M1sok9QfM2mBEfsDwXhx50-Nc,6464
-omniopt2-7326.data/data/bin/LICENSE,sha256=OXLcl0T2SZ8Pmy2_dmlvKuetivmyPd5m1q-Gyd-zaYY,35149
-omniopt2-7326.data/data/bin/apt-dependencies.txt,sha256=X5tBB8ZLW9XaFtRh8B7C2pIkSoxNNawqioDr0QZAtuM,149
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omniopt2.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: omniopt2
-Version: 7326
+Version: 7332
 Summary: Automatic highly parallelized hyperparameter optimizer based on Ax/Botorch
 Home-page: https://scads.ai/transfer-2/verfuegbare-software-dienste-en/omniopt/
 Author: Norman Koch

pyproject.toml

@@ -5,7 +5,7 @@ authors = [
   {email = "norman.koch@tu-dresden.de"},
   {name = "Norman Koch"}
 ]
-version = "7326"
+version = "7332"
 
 readme = "README.md"
 dynamic = ["dependencies"]