omnigenome 0.3.25a0__py3-none-any.whl → 0.3.26a0__py3-none-any.whl
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- {omnigenome-0.3.25a0.dist-info → omnigenome-0.3.26a0.dist-info}/METADATA +3 -3
- omnigenome-0.3.26a0.dist-info/RECORD +7 -0
- omnigenome-0.3.25a0.dist-info/RECORD +0 -7
- {omnigenome-0.3.25a0.dist-info → omnigenome-0.3.26a0.dist-info}/WHEEL +0 -0
- {omnigenome-0.3.25a0.dist-info → omnigenome-0.3.26a0.dist-info}/entry_points.txt +0 -0
- {omnigenome-0.3.25a0.dist-info → omnigenome-0.3.26a0.dist-info}/licenses/LICENSE +0 -0
- {omnigenome-0.3.25a0.dist-info → omnigenome-0.3.26a0.dist-info}/top_level.txt +0 -0
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.4
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Name: omnigenome
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Version: 0.3.
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Version: 0.3.26a0
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Summary: OmniGenome: A comprehensive toolkit for genome analysis.
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Home-page: https://github.com/yangheng95/OmniGenBench
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Author: Yang, Heng
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@@ -182,7 +182,7 @@ ogb autobench \
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--trainer accelerate
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# Legacy command (still supported for backward compatibility)
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# autobench --
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# autobench --config_or_model "yangheng/OmniGenome-186M" --benchmark "RGB"
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```
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**Output**: Results include mean ± standard deviation for each metric (e.g., MCC: 0.742 ± 0.015, F1: 0.863 ± 0.009)
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@@ -202,7 +202,7 @@ seeds = [0, 1, 2, 3, 4] # Multi-seed for statistical rigor
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# Run automated evaluation
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bench = AutoBench(
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benchmark=benchmark,
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config_or_model=gfm,
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overwrite=False # Skip completed tasks
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)
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bench.run(autocast=False, batch_size=bench_size, seeds=seeds)
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omnigenome/__init__.py,sha256=2JNoPrnv-1lYXkBiuHBYVXp1OJiRD8c9j65qFeXJtQY,9436
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omnigenome-0.3.26a0.dist-info/licenses/LICENSE,sha256=oQoefBV6siHctF0ET-OO3EaSZgtqGtf-wdIAmokS8iY,11560
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omnigenome-0.3.26a0.dist-info/METADATA,sha256=QlTD8qC6qXLKYkGJe0AJLmOpg2mDdwEJrYYuVVRcYH4,15478
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omnigenome-0.3.26a0.dist-info/WHEEL,sha256=lTU6B6eIfYoiQJTZNc-fyaR6BpL6ehTzU3xGYxn2n8k,91
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omnigenome-0.3.26a0.dist-info/entry_points.txt,sha256=uu40UgMPxY65ASdRbrhkwH94r7CIYgyG_iDBmqFQbD8,84
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omnigenome-0.3.26a0.dist-info/top_level.txt,sha256=LVFxm_WPaxjj9KnAqdW94W4D4lbOk30gdsaKlJiSzTo,11
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omnigenome-0.3.26a0.dist-info/RECORD,,
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omnigenome/__init__.py,sha256=2JNoPrnv-1lYXkBiuHBYVXp1OJiRD8c9j65qFeXJtQY,9436
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omnigenome-0.3.25a0.dist-info/licenses/LICENSE,sha256=oQoefBV6siHctF0ET-OO3EaSZgtqGtf-wdIAmokS8iY,11560
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omnigenome-0.3.25a0.dist-info/METADATA,sha256=_rw5ica9Sn7FhS0vhCvLznhhywJCvRm6xcKNThYPzNw,15484
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omnigenome-0.3.25a0.dist-info/WHEEL,sha256=lTU6B6eIfYoiQJTZNc-fyaR6BpL6ehTzU3xGYxn2n8k,91
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omnigenome-0.3.25a0.dist-info/entry_points.txt,sha256=uu40UgMPxY65ASdRbrhkwH94r7CIYgyG_iDBmqFQbD8,84
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omnigenome-0.3.25a0.dist-info/top_level.txt,sha256=LVFxm_WPaxjj9KnAqdW94W4D4lbOk30gdsaKlJiSzTo,11
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omnigenome-0.3.25a0.dist-info/RECORD,,
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