offtracker 2.12.1__zip → 2.12.2__zip

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (31) hide show
  1. {offtracker-2.12.1/offtracker.egg-info → offtracker-2.12.2}/PKG-INFO +1 -1
  2. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/_version.py +2 -2
  3. {offtracker-2.12.1 → offtracker-2.12.2/offtracker.egg-info}/PKG-INFO +1 -1
  4. {offtracker-2.12.1 → offtracker-2.12.2}/scripts/offtracker_analysis.py +1 -1
  5. {offtracker-2.12.1 → offtracker-2.12.2}/LICENSE.txt +0 -0
  6. {offtracker-2.12.1 → offtracker-2.12.2}/MANIFEST.in +0 -0
  7. {offtracker-2.12.1 → offtracker-2.12.2}/README.md +0 -0
  8. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/X_offplot.py +0 -0
  9. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/X_offtracker.py +0 -0
  10. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/X_sequence.py +0 -0
  11. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/__init__.py +0 -0
  12. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/snakefile/Snakefile_QC.smk +0 -0
  13. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/snakefile/Snakefile_offtracker.smk +0 -0
  14. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/utility/1.1_bed2fr.py +0 -0
  15. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/utility/1.3_bdg_normalize_v4.0.py +0 -0
  16. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/utility/bedGraphToBigWig +0 -0
  17. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/utility/hg38.chrom.sizes +0 -0
  18. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/utility/mm10.chrom.sizes +0 -0
  19. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/utility/offtracker_blacklist_hg38.merged.bed +0 -0
  20. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker/utility/offtracker_blacklist_mm10.merged.bed +0 -0
  21. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker.egg-info/SOURCES.txt +0 -0
  22. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker.egg-info/dependency_links.txt +0 -0
  23. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker.egg-info/requires.txt +0 -0
  24. {offtracker-2.12.1 → offtracker-2.12.2}/offtracker.egg-info/top_level.txt +0 -0
  25. {offtracker-2.12.1 → offtracker-2.12.2}/scripts/offtracker_candidates.py +0 -0
  26. {offtracker-2.12.1 → offtracker-2.12.2}/scripts/offtracker_config.py +0 -0
  27. {offtracker-2.12.1 → offtracker-2.12.2}/scripts/offtracker_init.py +0 -0
  28. {offtracker-2.12.1 → offtracker-2.12.2}/scripts/offtracker_plot.py +0 -0
  29. {offtracker-2.12.1 → offtracker-2.12.2}/scripts/offtracker_qc.py +0 -0
  30. {offtracker-2.12.1 → offtracker-2.12.2}/setup.cfg +0 -0
  31. {offtracker-2.12.1 → offtracker-2.12.2}/setup.py +0 -0
{offtracker-2.12.1/offtracker.egg-info → offtracker-2.12.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: offtracker
3
- Version: 2.12.1
3
+ Version: 2.12.2
4
4
  Summary: Tracking-seq data analysis
5
5
  Home-page: https://github.com/Lan-lab/offtracker
6
6
  Author: Runda Xu
{offtracker-2.12.1 → offtracker-2.12.2}/offtracker/_version.py RENAMED
@@ -1,4 +1,4 @@
1
- __version__ = "2.12.1"
1
+ __version__ = "2.12.2"
2
2
  # 2023.08.11. v1.1.0 adding a option for not normalizing the bw file
3
3
  # 2023.10.26. v1.9.0 prerelease for v2.0
4
4
  # 2023.10.27. v2.0.0 大更新，还没微调
@@ -40,4 +40,4 @@ __version__ = "2.12.1"
40
40
  # 2025.06.28. v2.10.11 回滚到2.10.9外加修正
41
41
  # 2025.07.02. v2.11.4 基于 blast 的缺陷更新 candidates，去除 quick mode
42
42
  # 2025.07.04. v2.11.5 offtracker_analysis 提前 skip 已有结果的样本
43
- # 2025.07.04. v2.12.1 新增 region_index 标记区域，用于更好的去重
43
+ # 2025.07.04. v2.12.2 新增 region_index 标记区域，用于更好的去重
{offtracker-2.12.1 → offtracker-2.12.2/offtracker.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: offtracker
3
- Version: 2.12.1
3
+ Version: 2.12.2
4
4
  Summary: Tracking-seq data analysis
5
5
  Home-page: https://github.com/Lan-lab/offtracker
6
6
  Author: Runda Xu
{offtracker-2.12.1 → offtracker-2.12.2}/scripts/offtracker_analysis.py RENAMED
@@ -306,7 +306,7 @@ def main():
306
306
  # df_result = df_score[list_nondup].copy()
307
307
 
308
308
  # 2025.07.06 更新去重方式
309
- df_result = df_score.drop_duplicates(subset=['region_index'], keep='first')
309
+ df_result = df_score.drop_duplicates(subset=['region_index'], keep='first').copy()
310
310
 
311
311
  # 标准化分布
312
312
  target_std=0.15
{offtracker-2.12.1 → offtracker-2.12.2}/LICENSE.txt RENAMED
File without changes
{offtracker-2.12.1 → offtracker-2.12.2}/MANIFEST.in RENAMED
File without changes
{offtracker-2.12.1 → offtracker-2.12.2}/README.md RENAMED
File without changes
{offtracker-2.12.1 → offtracker-2.12.2}/setup.cfg RENAMED
File without changes
{offtracker-2.12.1 → offtracker-2.12.2}/setup.py RENAMED
File without changes