offtracker 1.0.2__zip → 2.7.7__zip

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (33) hide show
  1. {offtracker-1.0.2/offtracker.egg-info → offtracker-2.7.7}/PKG-INFO +1 -1
  2. offtracker-2.7.7/offtracker/X_offplot.py +123 -0
  3. offtracker-2.7.7/offtracker/X_offtracker.py +338 -0
  4. offtracker-1.0.2/offtracker/X_general.py → offtracker-2.7.7/offtracker/X_sequence.py +18 -5
  5. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker/__init__.py +1 -1
  6. offtracker-2.7.7/offtracker/_version.py +27 -0
  7. offtracker-2.7.7/offtracker/mapping/Snakefile_offtracker +245 -0
  8. offtracker-2.7.7/offtracker/mapping/offtracker_blacklist_hg38.merged.bed +3846 -0
  9. offtracker-2.7.7/offtracker/mapping/offtracker_blacklist_mm10.merged.bed +5827 -0
  10. {offtracker-1.0.2 → offtracker-2.7.7/offtracker.egg-info}/PKG-INFO +1 -1
  11. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker.egg-info/SOURCES.txt +4 -3
  12. offtracker-2.7.7/scripts/offtracker_analysis.py +369 -0
  13. {offtracker-1.0.2 → offtracker-2.7.7}/scripts/offtracker_candidates.py +59 -101
  14. {offtracker-1.0.2 → offtracker-2.7.7}/scripts/offtracker_config.py +15 -10
  15. offtracker-1.0.2/offtracker/X_analysis.py +0 -332
  16. offtracker-1.0.2/offtracker/_version.py +0 -1
  17. offtracker-1.0.2/offtracker/mapping/Snakefile_Trackseq +0 -175
  18. offtracker-1.0.2/offtracker/mapping/offtracker_blacklist_hg38.merged.bed +0 -22228
  19. offtracker-1.0.2/offtracker/mapping/offtracker_blacklist_mm10.merged.bed +0 -9347
  20. offtracker-1.0.2/scripts/offtracker_analysis.py +0 -407
  21. {offtracker-1.0.2 → offtracker-2.7.7}/LICENSE.txt +0 -0
  22. {offtracker-1.0.2 → offtracker-2.7.7}/MANIFEST.in +0 -0
  23. {offtracker-1.0.2 → offtracker-2.7.7}/README.md +0 -0
  24. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker/mapping/1.1_bed2fr_v4.5.py +0 -0
  25. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker/mapping/1.3_bdg_normalize_v4.0.py +0 -0
  26. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker/mapping/bedGraphToBigWig +0 -0
  27. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker/mapping/hg38.chrom.sizes +0 -0
  28. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker/mapping/mm10.chrom.sizes +0 -0
  29. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker.egg-info/dependency_links.txt +0 -0
  30. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker.egg-info/requires.txt +0 -0
  31. {offtracker-1.0.2 → offtracker-2.7.7}/offtracker.egg-info/top_level.txt +0 -0
  32. {offtracker-1.0.2 → offtracker-2.7.7}/setup.cfg +0 -0
  33. {offtracker-1.0.2 → offtracker-2.7.7}/setup.py +0 -0

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