offtracker 1.0.1__zip → 2.7.7__zip

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (33) hide show
  1. {offtracker-1.0.1/offtracker.egg-info → offtracker-2.7.7}/PKG-INFO +13 -6
  2. {offtracker-1.0.1 → offtracker-2.7.7}/README.md +12 -5
  3. offtracker-2.7.7/offtracker/X_offplot.py +123 -0
  4. offtracker-2.7.7/offtracker/X_offtracker.py +338 -0
  5. offtracker-1.0.1/offtracker/X_general.py → offtracker-2.7.7/offtracker/X_sequence.py +18 -5
  6. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker/__init__.py +1 -1
  7. offtracker-2.7.7/offtracker/_version.py +27 -0
  8. offtracker-2.7.7/offtracker/mapping/Snakefile_offtracker +245 -0
  9. offtracker-2.7.7/offtracker/mapping/offtracker_blacklist_hg38.merged.bed +3846 -0
  10. offtracker-2.7.7/offtracker/mapping/offtracker_blacklist_mm10.merged.bed +5827 -0
  11. {offtracker-1.0.1 → offtracker-2.7.7/offtracker.egg-info}/PKG-INFO +13 -6
  12. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker.egg-info/SOURCES.txt +4 -3
  13. offtracker-2.7.7/scripts/offtracker_analysis.py +369 -0
  14. {offtracker-1.0.1 → offtracker-2.7.7}/scripts/offtracker_candidates.py +59 -101
  15. {offtracker-1.0.1 → offtracker-2.7.7}/scripts/offtracker_config.py +15 -10
  16. offtracker-1.0.1/offtracker/X_analysis.py +0 -332
  17. offtracker-1.0.1/offtracker/_version.py +0 -1
  18. offtracker-1.0.1/offtracker/mapping/Snakefile_Trackseq +0 -193
  19. offtracker-1.0.1/offtracker/mapping/offtracker_blacklist_hg38.merged.bed +0 -22228
  20. offtracker-1.0.1/offtracker/mapping/offtracker_blacklist_mm10.merged.bed +0 -9347
  21. offtracker-1.0.1/scripts/offtracker_analysis.py +0 -407
  22. {offtracker-1.0.1 → offtracker-2.7.7}/LICENSE.txt +0 -0
  23. {offtracker-1.0.1 → offtracker-2.7.7}/MANIFEST.in +0 -0
  24. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker/mapping/1.1_bed2fr_v4.5.py +0 -0
  25. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker/mapping/1.3_bdg_normalize_v4.0.py +0 -0
  26. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker/mapping/bedGraphToBigWig +0 -0
  27. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker/mapping/hg38.chrom.sizes +0 -0
  28. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker/mapping/mm10.chrom.sizes +0 -0
  29. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker.egg-info/dependency_links.txt +0 -0
  30. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker.egg-info/requires.txt +0 -0
  31. {offtracker-1.0.1 → offtracker-2.7.7}/offtracker.egg-info/top_level.txt +0 -0
  32. {offtracker-1.0.1 → offtracker-2.7.7}/setup.cfg +0 -0
  33. {offtracker-1.0.1 → offtracker-2.7.7}/setup.py +0 -0

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