numcodecs 0.15.0__cp312-cp312-macosx_10_13_x86_64.whl → 0.15.1__cp312-cp312-macosx_10_13_x86_64.whl

numcodecs/checksum32.py

@@ -13,7 +13,7 @@ from .jenkins import jenkins_lookup3
 
 _crc32c: Optional[ModuleType] = None
 with suppress(ImportError):
-    import crc32c as _crc32c  # type: ignore[no-redef]
+    import crc32c as _crc32c  # type: ignore[no-redef, unused-ignore]
 
 if TYPE_CHECKING:  # pragma: no cover
     from typing_extensions import Buffer

numcodecs/errors.py

@@ -0,0 +1,26 @@
+"""
+This module defines custom exceptions that are raised in the `numcodecs` codebase.
+"""
+
+
+class UnknownCodecError(ValueError):
+    """
+    An exception that is raised when trying to receive a codec that has not been registered.
+
+    Parameters
+    ----------
+    codec_id : str
+        Codec identifier.
+
+    Examples
+    ----------
+    >>> import numcodecs
+    >>> numcodecs.get_codec({"codec_id": "unknown"})
+    Traceback (most recent call last):
+        ...
+    UnknownCodecError: codec not available: 'unknown'
+    """
+
+    def __init__(self, codec_id: str):
+        self.codec_id = codec_id
+        super().__init__(f"codec not available: '{codec_id}'")

numcodecs/json.py

@@ -68,7 +68,7 @@ class JSON(Codec):
     def encode(self, buf):
         try:
             buf = np.asarray(buf)
-        except ValueError:
+        except ValueError:  # pragma: no cover
             buf = np.asarray(buf, dtype=object)
         items = np.atleast_1d(buf).tolist()
         items.append(buf.dtype.str)

numcodecs/quantize.py

@@ -65,9 +65,9 @@ class Quantize(Codec):
         precision = 10.0**-self.digits
         exp = math.log10(precision)
         if exp < 0:
-            exp = int(math.floor(exp))
+            exp = math.floor(exp)
         else:
-            exp = int(math.ceil(exp))
+            exp = math.ceil(exp)
         bits = math.ceil(math.log2(10.0**-exp))
         scale = 2.0**bits
         enc = np.around(scale * arr) / scale

numcodecs/registry.py

@@ -5,6 +5,7 @@ import logging
 from importlib.metadata import EntryPoints, entry_points
 
 from numcodecs.abc import Codec
+from numcodecs.errors import UnknownCodecError
 
 logger = logging.getLogger("numcodecs")
 codec_registry: dict[str, Codec] = {}
@@ -50,7 +51,7 @@ def get_codec(config):
         register_codec(cls, codec_id=codec_id)
     if cls:
         return cls.from_config(config)
-    raise ValueError(f'codec not available: {codec_id!r}')
+    raise UnknownCodecError(f"{codec_id!r}")
 
 
 def register_codec(cls, codec_id=None):

numcodecs/tests/test_registry.py

@@ -3,11 +3,12 @@ import inspect
 import pytest
 
 import numcodecs
+from numcodecs.errors import UnknownCodecError
 from numcodecs.registry import get_codec
 
 
 def test_registry_errors():
-    with pytest.raises(ValueError):
+    with pytest.raises(UnknownCodecError, match='foo'):
         get_codec({'id': 'foo'})
 
 

numcodecs/tests/test_zarr3.py

@@ -91,7 +91,7 @@ def test_generic_compressor(
         (numcodecs.zarr3.Delta, {"dtype": "float32"}),
         (numcodecs.zarr3.FixedScaleOffset, {"offset": 0, "scale": 25.5}),
         (numcodecs.zarr3.FixedScaleOffset, {"offset": 0, "scale": 51, "astype": "uint16"}),
-        (numcodecs.zarr3.AsType, {"encode_dtype": "float32", "decode_dtype": "float64"}),
+        (numcodecs.zarr3.AsType, {"encode_dtype": "float32", "decode_dtype": "float32"}),
     ],
     ids=[
         "delta",
@@ -225,11 +225,11 @@ def test_generic_bytes_codec(
 ):
     try:
         codec_class()._codec  # noqa: B018
-    except ValueError as e:
+    except ValueError as e:  # pragma: no cover
         if "codec not available" in str(e):
             pytest.xfail(f"{codec_class.codec_name} is not available: {e}")
         else:
-            raise  # pragma: no cover
+            raise
     except ImportError as e:  # pragma: no cover
         pytest.xfail(f"{codec_class.codec_name} is not available: {e}")
 
@@ -272,3 +272,8 @@ def test_delta_astype(store: StorePath):
 def test_repr():
     codec = numcodecs.zarr3.LZ4(level=5)
     assert repr(codec) == "LZ4(codec_name='numcodecs.lz4', codec_config={'level': 5})"
+
+
+def test_to_dict():
+    codec = numcodecs.zarr3.LZ4(level=5)
+    assert codec.to_dict() == {"name": "numcodecs.lz4", "configuration": {"level": 5}}

numcodecs/version.py

@@ -12,5 +12,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '0.15.0'
-__version_tuple__ = version_tuple = (0, 15, 0)
+__version__ = version = '0.15.1'
+__version_tuple__ = version_tuple = (0, 15, 1)

numcodecs/zarr3.py

@@ -112,6 +112,7 @@ class _NumcodecsCodec(Metadata):
 
     def to_dict(self) -> dict[str, JSON]:
         codec_config = self.codec_config.copy()
+        codec_config.pop("id", None)
         return {
             "name": self.codec_name,
             "configuration": codec_config,
@@ -270,7 +271,7 @@ class Shuffle(_NumcodecsBytesBytesCodec):
         super().__init__(**codec_config)
 
     def evolve_from_array_spec(self, array_spec: ArraySpec) -> Shuffle:
-        if array_spec.dtype.itemsize != self.codec_config.get("elementsize"):
+        if self.codec_config.get("elementsize", None) is None:
             return Shuffle(**{**self.codec_config, "elementsize": array_spec.dtype.itemsize})
         return self  # pragma: no cover
 
@@ -307,7 +308,7 @@ class FixedScaleOffset(_NumcodecsArrayArrayCodec):
         return chunk_spec
 
     def evolve_from_array_spec(self, array_spec: ArraySpec) -> FixedScaleOffset:
-        if str(array_spec.dtype) != self.codec_config.get("dtype"):
+        if self.codec_config.get("dtype", None) is None:
             return FixedScaleOffset(**{**self.codec_config, "dtype": str(array_spec.dtype)})
         return self
 
@@ -320,7 +321,7 @@ class Quantize(_NumcodecsArrayArrayCodec):
         super().__init__(**codec_config)
 
     def evolve_from_array_spec(self, array_spec: ArraySpec) -> Quantize:
-        if str(array_spec.dtype) != self.codec_config.get("dtype"):
+        if self.codec_config.get("dtype", None) is None:
             return Quantize(**{**self.codec_config, "dtype": str(array_spec.dtype)})
         return self
 
@@ -355,8 +356,7 @@ class AsType(_NumcodecsArrayArrayCodec):
         return replace(chunk_spec, dtype=np.dtype(self.codec_config["encode_dtype"]))  # type: ignore[arg-type]
 
     def evolve_from_array_spec(self, array_spec: ArraySpec) -> AsType:
-        decode_dtype = self.codec_config.get("decode_dtype")
-        if str(array_spec.dtype) != decode_dtype:
+        if self.codec_config.get("decode_dtype", None) is None:
             return AsType(**{**self.codec_config, "decode_dtype": str(array_spec.dtype)})
         return self
 

{numcodecs-0.15.0.dist-info → numcodecs-0.15.1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: numcodecs
-Version: 0.15.0
+Version: 0.15.1
 Summary: A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.
 Maintainer-email: Alistair Miles <alimanfoo@googlemail.com>
 License: MIT

{numcodecs-0.15.0.dist-info → numcodecs-0.15.1.dist-info}/RECORD

@@ -1,9 +1,9 @@
-numcodecs-0.15.0.dist-info/RECORD,,
-numcodecs-0.15.0.dist-info/WHEEL,sha256=FBd6an5AFoPq_6i7rX7RY9hnbsVzpIPkc8xRof4mLK4,111
-numcodecs-0.15.0.dist-info/entry_points.txt,sha256=3W3FHKrwE52X3fLq8KdioOtf93lh5KaoGV5t2D10DBI,919
-numcodecs-0.15.0.dist-info/top_level.txt,sha256=JkHllzt6IuVudg4Tk--wF-yfPPsdVOiMTag1tjGIihw,10
-numcodecs-0.15.0.dist-info/LICENSE.txt,sha256=lJysaEeeE7bJeSRjUVC04e9eaXZq2eRy6oWgjBV2u5Y,1124
-numcodecs-0.15.0.dist-info/METADATA,sha256=Ex3f5L-JE6Kr2Bm9v148Lu1xeLTFWkH7k0k9kbL2iGM,2934
+numcodecs-0.15.1.dist-info/RECORD,,
+numcodecs-0.15.1.dist-info/WHEEL,sha256=FBd6an5AFoPq_6i7rX7RY9hnbsVzpIPkc8xRof4mLK4,111
+numcodecs-0.15.1.dist-info/entry_points.txt,sha256=3W3FHKrwE52X3fLq8KdioOtf93lh5KaoGV5t2D10DBI,919
+numcodecs-0.15.1.dist-info/top_level.txt,sha256=JkHllzt6IuVudg4Tk--wF-yfPPsdVOiMTag1tjGIihw,10
+numcodecs-0.15.1.dist-info/LICENSE.txt,sha256=lJysaEeeE7bJeSRjUVC04e9eaXZq2eRy6oWgjBV2u5Y,1124
+numcodecs-0.15.1.dist-info/METADATA,sha256=T3XwC0XFISSWpaQTIYlzENZDZN3F5scItBHMhsR2MLQ,2934
 numcodecs/jenkins.cpython-312-darwin.so,sha256=hdIgsKiX0fK89kuhYfj5wiYxr26IzsjuA3AXdiAJEms,301760
 numcodecs/lzma.py,sha256=6XeJ-c-lTJN1EVrIOb5cEFEiMGlNHsS4c_OentmUox0,2257
 numcodecs/astype.py,sha256=pfdFqjNvb-PETswa2_UxZm632O-y2Lex-g_68IJpiuk,2099
@@ -11,13 +11,13 @@ numcodecs/gzip.py,sha256=DJuc87g8neqn-SYEeCEQwPSdEN5oZGgDUan9MTI6Fb4,1436
 numcodecs/zstd.cpython-312-darwin.so,sha256=CpHw41LkF0gL9hRIPneiETJ0LjXBmgawawZhhPVxHUU,2355872
 numcodecs/base64.py,sha256=79BSqVvloKc8JYenUQfqdPm0a0JAZhd9Zld7k5Cp2lc,752
 numcodecs/bz2.py,sha256=4Ups3IMVsjvBlXyaeYONPdE14TaK9V-4LH5LSNe7AGc,1174
-numcodecs/version.py,sha256=oHv-EAjiXbJma3jZ0Tq6UPimiWYyyw2Ao9S8zdq9uWs,413
+numcodecs/version.py,sha256=po5_rvCFTU8xU9IC56wyK0-zfBgz_U4xX6CO2mv9Mzs,413
 numcodecs/compat.py,sha256=JadagE6pTEcrX3V8wDml0n1tdkHvOWo6D21J3a4P0mw,6505
 numcodecs/_shuffle.cpython-312-darwin.so,sha256=GqF_M0HMMoOTn-D_blC9rYALL2IQaOvjxttRyLQIVuQ,282360
-numcodecs/checksum32.py,sha256=L4BxbQZZ556EvJlYyxCQgZ3fvIZFxva_rycOx7FEBdY,5435
+numcodecs/checksum32.py,sha256=iYJY1oAUQ71_Dk167uBuPh1wLOdozhGCbld7f7-qqhg,5450
 numcodecs/ndarray_like.py,sha256=fVupUg_K_rDZNRlUmTiRp53OmF6YHb-yNyixJNFR8ME,1883
-numcodecs/quantize.py,sha256=UcQPVsWvx7fHb5mWfOd7VvhCc-MI8C2B3afBG4KYUFM,3026
-numcodecs/registry.py,sha256=76qBMok0wR_eeffFZNNEiFxysjHNVI_76AxFGi9p5PI,1831
+numcodecs/quantize.py,sha256=4mPx4kWanv5wGa22HvEiP893xqG5dDDtN-oKChj6nfE,3016
+numcodecs/registry.py,sha256=oRN9uJsWIosZbAZFkOWyUos3GZ-h_zq_cN-t_uPLk0A,1864
 numcodecs/blosc.cpython-312-darwin.so,sha256=SslXt4zcp_X37CEwZJR-Tz0voUI8Dq12tOlF3MzmyDY,3155656
 numcodecs/pickles.py,sha256=LtcMa6cK-V5TUYJNR4dRDsWWRmLfNv0syZddbrbRv3A,1290
 numcodecs/fixedscaleoffset.py,sha256=fQwP_H-P3Mq4_LXtMQw5CLYeMjCBUdTtV-AKWVAIzkY,4188
@@ -27,23 +27,24 @@ numcodecs/bitround.py,sha256=4lei39ZG4G2GGkDxl12q29nR5_8a4Icx4T-OgP1A1D4,2845
 numcodecs/vlen.cpython-312-darwin.so,sha256=dH9ZW6tRzWioFaibgIK2lZLfe_9AS0sQdEj07KM8mck,408088
 numcodecs/zlib.py,sha256=gLPUICEQc5p6DICC_63nOsbUqxzJH_5ynuzenTQXzOQ,1049
 numcodecs/shuffle.py,sha256=hYOFJOCEeDSNI-TqT1JrbQxbprkQD4R8VfSzD4IPI3I,1575
-numcodecs/zarr3.py,sha256=lBBOVkoVmZ1YPU4z1RxdRHXaS4LXlD6ys_YobQ1gZM8,14712
+numcodecs/zarr3.py,sha256=dfGgWL1yfB-YPwUzhlDQtfTuNziCeq6m9PvR-X-KlhQ,14665
 numcodecs/delta.py,sha256=x0PjNiuX48rmh9M6ZHoYkI9bKOq00Aiyz_jLrVlAq8w,2791
 numcodecs/zfpy.py,sha256=--TCrXOsSJ-2uU_7d-0YwHpk8Hti98hofB4jht5helk,3900
 numcodecs/msgpacks.py,sha256=GkTcFJrhKdpWnwQn4-282q4_edqlzZFdJFux2LtNk30,2619
+numcodecs/errors.py,sha256=IV0B9fw_Wn8k3fjLtXOOU_-0_Al-dWY_dizvqFiNwkk,663
 numcodecs/fletcher32.cpython-312-darwin.so,sha256=beeK_lWBzvpayMFT_c_OE_KWyfsC6fbV_W2pVeyzOTA,319976
 numcodecs/compat_ext.cpython-312-darwin.so,sha256=W_FrtK06zzjVZKr6hxKGACKeCb2sH3PuWYFAkI2USvM,80488
 numcodecs/packbits.py,sha256=L7gM-8AQQTPC2IOPbatzNp-tH67EUp0Tonx_JSYHje4,1993
 numcodecs/categorize.py,sha256=jPipT6mVrpGSe9QuI-MeVzTZuUKAZWF0XN5Wj_8Ifng,2948
-numcodecs/json.py,sha256=mtzQE4a_vC3LJcVNnI3_HKqk96OPTebsMZLYye2Fbx4,3373
+numcodecs/json.py,sha256=WQcDcDPVxAQm-sxUg_XD70InKLD4iyjQOBiHPn2N3VE,3393
 numcodecs/abc.py,sha256=13vRquZ-u_n1YqM9SYx8sBDseJlH9A_A57_Z2QE-4KY,4504
 numcodecs/pcodec.py,sha256=ZB2Hw5l7aOKi0hOQ3M7GOAwaTNCBRiNr_8IpJPdrcE4,4714
 numcodecs/tests/test_categorize.py,sha256=ftL-LSVq63R-kGuQxUb96uL1e563mlF9CWAf3yQB-Bk,2756
-numcodecs/tests/test_registry.py,sha256=RsxLV9oO37jpUOaj58L-RgNX9Brw_SjH2Pb1eJsYS6c,1049
+numcodecs/tests/test_registry.py,sha256=9Wp-VxGtEtNvwj46Edv6R8Jc4WPu80yWP7mRZyxepJ4,1116
 numcodecs/tests/test_vlen_utf8.py,sha256=H92YtqNY0kpO2Icu1Ey2iItK38ZhKMnJi_2FBwcKSvU,2474
 numcodecs/tests/test_bitround.py,sha256=ayCuANNDA0cP3mqZkJ90QU9eI7ws4-lPRKU_gkflOlg,2349
 numcodecs/tests/test_gzip.py,sha256=I685q0_vu3b_JibUz3nhW1mQtlLSQzGdgGD2twbGPXc,2925
-numcodecs/tests/test_zarr3.py,sha256=b35dc1yZTM21TuVknJr7v_MS9ECNaLIdEt05vd8_fNM,8333
+numcodecs/tests/test_zarr3.py,sha256=LbOuTVEn1XGhtLNx3Sv3wUu3gl0kV7ne_gE_cloUYIE,8483
 numcodecs/tests/test_delta.py,sha256=1_XnV1JYMEnxO0iXDXVSzTltjRPtdoEb4Y8TpmllS-o,1636
 numcodecs/tests/test_lzma.py,sha256=mPj5MebkWg1h0W4ClFF_34cJ0_Toje7z7JZ8gOMngzs,2723
 numcodecs/tests/test_bz2.py,sha256=pefO_YlOLr-RIswHas8DAQ4j81jhqLT5XGEuQ2i8DtI,1889