numcodecs 0.14.0__cp313-cp313-macosx_11_0_arm64.whl → 0.14.1__cp313-cp313-macosx_11_0_arm64.whl

numcodecs/__init__.py

@@ -117,13 +117,17 @@ with suppress(ImportError):
 
     register_codec(MsgPack)
 
-from numcodecs.checksum32 import CRC32, CRC32C, Adler32, JenkinsLookup3
+from numcodecs.checksum32 import CRC32, Adler32, JenkinsLookup3
 
 register_codec(CRC32)
-register_codec(CRC32C)
 register_codec(Adler32)
 register_codec(JenkinsLookup3)
 
+with suppress(ImportError):
+    from numcodecs.checksum32 import CRC32C
+
+    register_codec(CRC32C)
+
 from numcodecs.json import JSON
 
 register_codec(JSON)

numcodecs/checksum32.py

@@ -1,7 +1,9 @@
 import struct
 import zlib
 from collections.abc import Callable
-from typing import TYPE_CHECKING, Literal
+from contextlib import suppress
+from types import ModuleType
+from typing import TYPE_CHECKING, Literal, Optional
 
 import numpy as np
 
@@ -9,7 +11,11 @@ from .abc import Codec
 from .compat import ensure_contiguous_ndarray, ndarray_copy
 from .jenkins import jenkins_lookup3
 
-if TYPE_CHECKING:
+_crc32c: Optional[ModuleType] = None
+with suppress(ImportError):
+    import crc32c as _crc32c  # type: ignore[no-redef]
+
+if TYPE_CHECKING:  # pragma: no cover
     from typing_extensions import Buffer
 
 CHECKSUM_LOCATION = Literal['start', 'end']
@@ -76,28 +82,6 @@ class CRC32(Checksum32):
     location = 'start'
 
 
-class CRC32C(Checksum32):
-    """Codec add a crc32c checksum to the buffer.
-
-    Parameters
-    ----------
-    location : 'start' or 'end'
-        Where to place the checksum in the buffer.
-    """
-
-    codec_id = 'crc32c'
-
-    def checksum(self, buf):
-        try:
-            from crc32c import crc32c as crc32c_
-
-            return crc32c_(buf)
-        except ImportError:  # pragma: no cover
-            raise ImportError("crc32c must be installed to use the CRC32C checksum codec.")
-
-    location = 'end'
-
-
 class Adler32(Checksum32):
     """Codec add a adler32 checksum to the buffer.
 
@@ -168,3 +152,19 @@ class JenkinsLookup3(Checksum32):
             out.view("uint8")[:] = b[:-4]
             return out
         return memoryview(b[:-4])
+
+
+if _crc32c:
+
+    class CRC32C(Checksum32):
+        """Codec add a crc32c checksum to the buffer.
+
+        Parameters
+        ----------
+        location : 'start' or 'end'
+            Where to place the checksum in the buffer.
+        """
+
+        codec_id = 'crc32c'
+        checksum = _crc32c.crc32c  # type: ignore[union-attr]
+        location = 'end'

numcodecs/pcodec.py

@@ -1,7 +1,6 @@
 from typing import Literal, Optional
 
-import numcodecs
-import numcodecs.abc
+from numcodecs.abc import Codec
 from numcodecs.compat import ensure_contiguous_ndarray
 
 try:
@@ -13,7 +12,7 @@ except ImportError:  # pragma: no cover
 DEFAULT_MAX_PAGE_N = 262144
 
 
-class PCodec(numcodecs.abc.Codec):
+class PCodec(Codec):
     """
     PCodec (or pco, pronounced "pico") losslessly compresses and decompresses
     numerical sequences with high compression ratio and fast speed.

numcodecs/tests/test_checksum32.py

@@ -1,9 +1,10 @@
 import itertools
+from contextlib import suppress
 
 import numpy as np
 import pytest
 
-from numcodecs.checksum32 import CRC32, CRC32C, Adler32
+from numcodecs.checksum32 import CRC32, Adler32
 from numcodecs.tests.common import (
     check_backwards_compatibility,
     check_config,
@@ -13,6 +14,12 @@ from numcodecs.tests.common import (
     check_repr,
 )
 
+has_crc32c = False
+with suppress(ImportError):
+    from numcodecs.checksum32 import CRC32C
+
+    has_crc32c = True
+
 # mix of dtypes: integer, float, bool, string
 # mix of shapes: 1D, 2D, 3D
 # mix of orders: C, F
@@ -35,11 +42,16 @@ arrays = [
 codecs = [
     CRC32(),
     CRC32(location="end"),
-    CRC32C(location="start"),
-    CRC32C(),
     Adler32(),
     Adler32(location="end"),
 ]
+if has_crc32c:
+    codecs.extend(
+        [
+            CRC32C(location="start"),
+            CRC32C(),
+        ]
+    )
 
 
 @pytest.mark.parametrize(("codec", "arr"), itertools.product(codecs, arrays))
@@ -84,25 +96,28 @@ def test_err_encode_list(codec):
 def test_err_location():
     with pytest.raises(ValueError):
         CRC32(location="foo")
-    with pytest.raises(ValueError):
-        CRC32C(location="foo")
     with pytest.raises(ValueError):
         Adler32(location="foo")
+    if has_crc32c:
+        with pytest.raises(ValueError):
+            CRC32C(location="foo")
 
 
 def test_repr():
     check_repr("CRC32(location='start')")
-    check_repr("CRC32C(location='start')")
-    check_repr("Adler32(location='start')")
     check_repr("CRC32(location='end')")
-    check_repr("CRC32C(location='end')")
+    check_repr("Adler32(location='start')")
     check_repr("Adler32(location='end')")
+    if has_crc32c:
+        check_repr("CRC32C(location='start')")
+        check_repr("CRC32C(location='end')")
 
 
 def test_backwards_compatibility():
     check_backwards_compatibility(CRC32.codec_id, arrays, [CRC32()])
     check_backwards_compatibility(Adler32.codec_id, arrays, [Adler32()])
-    check_backwards_compatibility(CRC32C.codec_id, arrays, [CRC32C()])
+    if has_crc32c:
+        check_backwards_compatibility(CRC32C.codec_id, arrays, [CRC32C()])
 
 
 @pytest.mark.parametrize("codec", codecs)
@@ -123,6 +138,7 @@ def test_err_out_too_small(codec):
         codec.decode(codec.encode(arr), out)
 
 
+@pytest.mark.skipif(not has_crc32c, reason="Needs `crc32c` installed")
 def test_crc32c_checksum():
     arr = np.arange(0, 64, dtype="uint8")
     buf = CRC32C(location="end").encode(arr)

numcodecs/tests/test_zarr3.py

@@ -5,10 +5,10 @@ from typing import TYPE_CHECKING
 import numpy as np
 import pytest
 
-if not TYPE_CHECKING:
-    zarr = pytest.importorskip("zarr")
-else:
+if TYPE_CHECKING:  # pragma: no cover
     import zarr
+else:
+    zarr = pytest.importorskip("zarr")
 
 import zarr.storage
 from zarr.core.common import JSON
@@ -36,7 +36,7 @@ EXPECTED_WARNING_STR = "Numcodecs codecs are not in the Zarr version 3.*"
 
 @pytest.fixture
 def store() -> StorePath:
-    return StorePath(MemoryStore(mode="w"))
+    return StorePath(MemoryStore(read_only=False))
 
 
 ALL_CODECS = [getattr(numcodecs.zarr3, cls_name) for cls_name in numcodecs.zarr3.__all__]
@@ -50,9 +50,7 @@ def test_entry_points(codec_class: type[numcodecs.zarr3._NumcodecsCodec]):
 
 @pytest.mark.parametrize("codec_class", ALL_CODECS)
 def test_docstring(codec_class: type[numcodecs.zarr3._NumcodecsCodec]):
-    if codec_class.__doc__ is None:
-        pytest.skip()
-    assert "See :class:`numcodecs." in codec_class.__doc__
+    assert "See :class:`numcodecs." in codec_class.__doc__  # type: ignore[operator]
 
 
 @pytest.mark.parametrize(

numcodecs/version.py

@@ -12,5 +12,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '0.14.0'
-__version_tuple__ = version_tuple = (0, 14, 0)
+__version__ = version = '0.14.1'
+__version_tuple__ = version_tuple = (0, 14, 1)

{numcodecs-0.14.0.dist-info → numcodecs-0.14.1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: numcodecs
-Version: 0.14.0
+Version: 0.14.1
 Summary: A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.
 Maintainer-email: Alistair Miles <alimanfoo@googlemail.com>
 License: MIT
@@ -21,28 +21,27 @@ Classifier: Programming Language :: Python :: 3 :: Only
 Requires-Python: >=3.11
 Description-Content-Type: text/x-rst
 License-File: LICENSE.txt
-Requires-Dist: numpy >=1.24
-Provides-Extra: crc32c
-Requires-Dist: crc32c >=2.7 ; extra == 'crc32c'
+Requires-Dist: numpy>=1.24
 Provides-Extra: docs
-Requires-Dist: sphinx ; extra == 'docs'
-Requires-Dist: sphinx-issues ; extra == 'docs'
-Requires-Dist: pydata-sphinx-theme ; extra == 'docs'
-Requires-Dist: numpydoc ; extra == 'docs'
-Requires-Dist: mock ; extra == 'docs'
-Provides-Extra: msgpack
-Requires-Dist: msgpack ; extra == 'msgpack'
-Provides-Extra: pcodec
-Requires-Dist: pcodec <0.3,>=0.2 ; extra == 'pcodec'
+Requires-Dist: sphinx; extra == "docs"
+Requires-Dist: sphinx-issues; extra == "docs"
+Requires-Dist: pydata-sphinx-theme; extra == "docs"
+Requires-Dist: numpydoc; extra == "docs"
 Provides-Extra: test
-Requires-Dist: coverage ; extra == 'test'
-Requires-Dist: pytest ; extra == 'test'
-Requires-Dist: pytest-cov ; extra == 'test'
-Provides-Extra: test_extras
-Requires-Dist: importlib-metadata ; extra == 'test_extras'
+Requires-Dist: coverage; extra == "test"
+Requires-Dist: pytest; extra == "test"
+Requires-Dist: pytest-cov; extra == "test"
+Provides-Extra: test-extras
+Requires-Dist: importlib_metadata; extra == "test-extras"
+Provides-Extra: msgpack
+Requires-Dist: msgpack; extra == "msgpack"
 Provides-Extra: zfpy
-Requires-Dist: zfpy >=1.0.0 ; extra == 'zfpy'
-Requires-Dist: numpy <2.0.0 ; extra == 'zfpy'
+Requires-Dist: zfpy>=1.0.0; extra == "zfpy"
+Requires-Dist: numpy<2.0.0; extra == "zfpy"
+Provides-Extra: pcodec
+Requires-Dist: pcodec<0.3,>=0.2; extra == "pcodec"
+Provides-Extra: crc32c
+Requires-Dist: crc32c>=2.7; extra == "crc32c"
 
 Numcodecs
 =========

{numcodecs-0.14.0.dist-info → numcodecs-0.14.1.dist-info}/RECORD

@@ -1,34 +1,34 @@
-numcodecs-0.14.0.dist-info/RECORD,,
-numcodecs-0.14.0.dist-info/WHEEL,sha256=pGoFsHcRfSWekwuGjrTjwwNxyb9yYWfaA3Xl5gm5TWI,109
-numcodecs-0.14.0.dist-info/entry_points.txt,sha256=3W3FHKrwE52X3fLq8KdioOtf93lh5KaoGV5t2D10DBI,919
-numcodecs-0.14.0.dist-info/top_level.txt,sha256=JkHllzt6IuVudg4Tk--wF-yfPPsdVOiMTag1tjGIihw,10
-numcodecs-0.14.0.dist-info/LICENSE.txt,sha256=lJysaEeeE7bJeSRjUVC04e9eaXZq2eRy6oWgjBV2u5Y,1124
-numcodecs-0.14.0.dist-info/METADATA,sha256=sTRfpHqmugtMbGMkTSRf2XoBjGPiERfVOIaEk876DNE,3008
-numcodecs/blosc.cpython-313-darwin.so,sha256=EAXFgjVuIRufJy4D_39XWjGptGfNNKSGrtQdHql3D-4,1042200
+numcodecs-0.14.1.dist-info/RECORD,,
+numcodecs-0.14.1.dist-info/WHEEL,sha256=fAn_VQwWuH_rMRyKwhTwvKm9fx9GheRVEYtY-6ugsD8,109
+numcodecs-0.14.1.dist-info/entry_points.txt,sha256=3W3FHKrwE52X3fLq8KdioOtf93lh5KaoGV5t2D10DBI,919
+numcodecs-0.14.1.dist-info/top_level.txt,sha256=JkHllzt6IuVudg4Tk--wF-yfPPsdVOiMTag1tjGIihw,10
+numcodecs-0.14.1.dist-info/LICENSE.txt,sha256=lJysaEeeE7bJeSRjUVC04e9eaXZq2eRy6oWgjBV2u5Y,1124
+numcodecs-0.14.1.dist-info/METADATA,sha256=z7htzMD2b4ngjUfooz3PXrelfQm_mVsX_-Qw12a12P8,2952
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 numcodecs/lzma.py,sha256=T46qhtfl1910bMIbcat6bp6_XBcfP9u-3HElBwHiAOU,2241
 numcodecs/astype.py,sha256=0M9nV2Jb-8EwyoZGmOhCssaBvMej_B6hQ2p41VkmDdA,2137
 numcodecs/gzip.py,sha256=7TyUzc9oliPqKA58VV7fNkCi_c9PP04MioAKG7a1oV0,1469
-numcodecs/lz4.cpython-313-darwin.so,sha256=24AP0V6_f9YlwQVY3bGBlAqYjRX7O5WcJbGUCVssMSc,248088
+numcodecs/lz4.cpython-313-darwin.so,sha256=yQ6_BioDrpa_B4xchmgpd1nOS7vZVcrPByCVE_6sZgs,248088
 numcodecs/base64.py,sha256=i-WpnY7A-vT-71By_tVBvHi41O4DzuqYyB829eNd29E,784
 numcodecs/bz2.py,sha256=4Ups3IMVsjvBlXyaeYONPdE14TaK9V-4LH5LSNe7AGc,1174
-numcodecs/version.py,sha256=9XbM6DRatFmjNkeSNxF4a6enpQeo8nPyAy9RTPPwPpY,413
+numcodecs/version.py,sha256=2Ctgubb5b_lxFG2ixV07ZYKw5eto45wRlKsBIObkGsg,413
 numcodecs/compat.py,sha256=JadagE6pTEcrX3V8wDml0n1tdkHvOWo6D21J3a4P0mw,6505
-numcodecs/checksum32.py,sha256=CQACDazagg5bvM07XQUnpMFiWBfkVVP_u_SIOYdxRe4,5378
-numcodecs/vlen.cpython-313-darwin.so,sha256=5re3pw91nniUDJaJCctd0JVm6ERC80dhMgMJALPEY50,261048
+numcodecs/checksum32.py,sha256=L4BxbQZZ556EvJlYyxCQgZ3fvIZFxva_rycOx7FEBdY,5435
+numcodecs/vlen.cpython-313-darwin.so,sha256=KC3YZeNFuWXZZa2PAU50mojSxxc6w5SrpBfv39tcte4,261048
 numcodecs/ndarray_like.py,sha256=Kl5O-oKpdvt_MsfYsD73d4dIr3WXaOJLdHUEsc6tIrc,1896
 numcodecs/quantize.py,sha256=WNgbVPNR6CnaF58yBbVHIQ_jg1mBe8dirkZ2ErNpQOI,3037
 numcodecs/registry.py,sha256=iGnnBJ1fuWBMQTvnLMMliXXMk2gmhaHq7o3m7i9kNsk,1833
-numcodecs/jenkins.cpython-313-darwin.so,sha256=Pw5IE9GlXCNY4F---MjT85Gc0ahbAAyoS5Lmhabinx0,186784
+numcodecs/jenkins.cpython-313-darwin.so,sha256=5zP6AQhMpI3K5qm-4WShZ8qCgxv9erH6x5c0QbblW3g,186784
 numcodecs/pickles.py,sha256=qWNRLnWZnZ9nq_QhNNI2x-s1Uoq9Eq1lsgwCSRTTxJo,1288
-numcodecs/zstd.cpython-313-darwin.so,sha256=wqqIz962O2DBAD73KW-PE0H87HBGTDoReJF5F4bHGuo,730728
+numcodecs/zstd.cpython-313-darwin.so,sha256=STUA55gOanI2PmrlAEtuB_6Tnx1Z6EWrgpNM8yxIDjk,730728
 numcodecs/fixedscaleoffset.py,sha256=3J5JWZcE13lAJz9axSEpTUpAC9H-yI2RBOX8oGhtwns,4196
-numcodecs/__init__.py,sha256=fyEDQ93UsiZhacarMJ5YOUvmWZpvDi8-tWWF6S5tRFs,3207
+numcodecs/__init__.py,sha256=duci0UP6fKmZIxYNy5XoUltyvBFRPDlSBGcJFbF_zro,3277
 numcodecs/bitround.py,sha256=4lei39ZG4G2GGkDxl12q29nR5_8a4Icx4T-OgP1A1D4,2845
-numcodecs/_shuffle.cpython-313-darwin.so,sha256=QJkkH-6RkwS9ButnDCB4tQpL7EVVgmptif0a5s0G9FM,182320
+numcodecs/_shuffle.cpython-313-darwin.so,sha256=t6UBkSXV2uczzzNvrO1KnIFbcPVkuqMZTQny3QW78cM,182320
 numcodecs/zlib.py,sha256=gLPUICEQc5p6DICC_63nOsbUqxzJH_5ynuzenTQXzOQ,1049
 numcodecs/shuffle.py,sha256=hYOFJOCEeDSNI-TqT1JrbQxbprkQD4R8VfSzD4IPI3I,1575
-numcodecs/fletcher32.cpython-313-darwin.so,sha256=frdoUp-t_2JK3U8LpSbWpLV7Msoz0Cs7Mgx5ewUS1eg,205824
-numcodecs/compat_ext.cpython-313-darwin.so,sha256=JURES_Xt4IPIdLwOr7wMIbsODZAdgfaiHqu-yL8csUA,78016
+numcodecs/fletcher32.cpython-313-darwin.so,sha256=4qyU2-45T8-nRkdPnZdrk9oHJbhUUjSNwgG9bKj67Z4,205824
+numcodecs/compat_ext.cpython-313-darwin.so,sha256=Qe2MIU9wUDpmXnPB1Baqiy1pkdcTIILD2A6_K3gaz3M,78016
 numcodecs/zarr3.py,sha256=yKajHAoBvJMWzGw59qiYrmhP9atPGzAlfNlpwcAIhac,13948
 numcodecs/delta.py,sha256=XMETqU9gvhvf3O2GoBQottuOg87GJr1DeaFRGEJGxfE,2984
 numcodecs/zfpy.py,sha256=ScGPw-w8t8CFHvijnwgE3pW4JIKD98QpSOH24sZsH60,3901
@@ -37,13 +37,13 @@ numcodecs/packbits.py,sha256=L7gM-8AQQTPC2IOPbatzNp-tH67EUp0Tonx_JSYHje4,1993
 numcodecs/categorize.py,sha256=yUzeAuPTNbMiI2vhkPRcxpEi0yQnr1orFs_I_BVoEoo,2983
 numcodecs/json.py,sha256=Xu4dN-FydFaV-5jOewJxVBsV6rUfGUWIp4IncrjIR-E,3355
 numcodecs/abc.py,sha256=a8EcPXbuKXaHuNfAj6CoeAVb6kphgKGoLsHcre2aXxg,4505
-numcodecs/pcodec.py,sha256=7fOqhKUWURCbfbQFoEy8772UGna59F6v_6k_4QJrzZg,3079
+numcodecs/pcodec.py,sha256=I3VuOXj54mvM5m_tr6wHcKBULg9m9NJl41RWaOgRK2U,3059
 numcodecs/tests/test_categorize.py,sha256=ftL-LSVq63R-kGuQxUb96uL1e563mlF9CWAf3yQB-Bk,2756
 numcodecs/tests/test_registry.py,sha256=9eUhr3PDw_rj7mk5k8Gh4Szl3pUXbXXZuTfZXKW-ZPU,1052
 numcodecs/tests/test_vlen_utf8.py,sha256=H92YtqNY0kpO2Icu1Ey2iItK38ZhKMnJi_2FBwcKSvU,2474
 numcodecs/tests/test_bitround.py,sha256=ayCuANNDA0cP3mqZkJ90QU9eI7ws4-lPRKU_gkflOlg,2349
 numcodecs/tests/test_gzip.py,sha256=I685q0_vu3b_JibUz3nhW1mQtlLSQzGdgGD2twbGPXc,2925
-numcodecs/tests/test_zarr3.py,sha256=RqWJMvsCDKFfsCufptIyTCnypE0xEIPRCbCHo1hkYY8,7547
+numcodecs/tests/test_zarr3.py,sha256=dVMacA7jTahAjJc6VLPnJMTykL0Gd73vJ0PKORRk_gU,7538
 numcodecs/tests/test_delta.py,sha256=1_XnV1JYMEnxO0iXDXVSzTltjRPtdoEb4Y8TpmllS-o,1636
 numcodecs/tests/test_lzma.py,sha256=VyepAqH5Bzne-_VdTIV8E8KHkGwK9QoLdrD-1iRX5p4,2721
 numcodecs/tests/test_bz2.py,sha256=pefO_YlOLr-RIswHas8DAQ4j81jhqLT5XGEuQ2i8DtI,1889
@@ -71,7 +71,7 @@ numcodecs/tests/test_zstd.py,sha256=79R6VMhni-6kg9LmlmBzGe22HXhg0RvSVjw4jVNPMJQ,
 numcodecs/tests/test_vlen_bytes.py,sha256=BpASj3-ap_ZjyK_nYP7YQSZg4gsECCh5DW_4pdNlhRs,2473
 numcodecs/tests/test_entrypoints.py,sha256=zWbyosPRhbSevwp4grlfjfnEyIneny-u7XmMe1xcoLI,504
 numcodecs/tests/test_zarr3_import.py,sha256=JBDyrL57lbZMI9axb9eA1OZnd_Lg-ppfsNV3VvxwVxk,332
-numcodecs/tests/test_checksum32.py,sha256=IR1ZXf2XJFh0Vrpxyz4P7RFym2kxtagp-yYDZowicPc,4238
+numcodecs/tests/test_checksum32.py,sha256=D0BV_p3XQ2Dv9jIoI9zEQel-PO25KWYIpUDgrhr6Cf8,4601
 numcodecs/tests/test_zfpy.py,sha256=g_2txraHDbnBPtbymJXsgAiD6MBH44-JYRkNx9tttYw,2762
 numcodecs/tests/test_blosc.py,sha256=VixIjcQNlzIdXrs1yvEMA1q7EMAu1jLy_VtRmgjcQU4,8866
 numcodecs/tests/package_with_entrypoint-0.1.dist-info/entry_points.txt,sha256=wel2k9KStuNez__clm2tjAwrcXiP17De8yNScHYtQZU,60

{numcodecs-0.14.0.dist-info → numcodecs-0.14.1.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (75.5.0)
+Generator: setuptools (75.6.0)
 Root-Is-Purelib: false
 Tag: cp313-cp313-macosx_11_0_arm64