numcodecs 0.12.1__cp311-cp311-win_amd64.whl → 0.13.1__cp311-cp311-win_amd64.whl

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Files changed (71) hide show
  1. numcodecs/__init__.py +33 -7
  2. numcodecs/_shuffle.cp311-win_amd64.pyd +0 -0
  3. numcodecs/abc.py +4 -6
  4. numcodecs/astype.py +2 -10
  5. numcodecs/bitround.py +0 -1
  6. numcodecs/blosc.cp311-win_amd64.pyd +0 -0
  7. numcodecs/bz2.py +1 -4
  8. numcodecs/categorize.py +12 -18
  9. numcodecs/checksum32.py +3 -8
  10. numcodecs/compat.py +6 -12
  11. numcodecs/compat_ext.cp311-win_amd64.pyd +0 -0
  12. numcodecs/delta.py +4 -11
  13. numcodecs/fixedscaleoffset.py +5 -9
  14. numcodecs/fletcher32.cp311-win_amd64.pyd +0 -0
  15. numcodecs/gzip.py +1 -5
  16. numcodecs/jenkins.cp311-win_amd64.pyd +0 -0
  17. numcodecs/json.py +35 -18
  18. numcodecs/lz4.cp311-win_amd64.pyd +0 -0
  19. numcodecs/lzma.py +9 -10
  20. numcodecs/msgpacks.py +13 -12
  21. numcodecs/ndarray_like.py +11 -16
  22. numcodecs/packbits.py +1 -4
  23. numcodecs/pcodec.py +89 -0
  24. numcodecs/pickles.py +2 -3
  25. numcodecs/quantize.py +7 -11
  26. numcodecs/registry.py +4 -8
  27. numcodecs/shuffle.py +5 -7
  28. numcodecs/tests/common.py +42 -32
  29. numcodecs/tests/package_with_entrypoint/__init__.py +0 -1
  30. numcodecs/tests/test_astype.py +7 -7
  31. numcodecs/tests/test_base64.py +10 -13
  32. numcodecs/tests/test_bitround.py +0 -1
  33. numcodecs/tests/test_blosc.py +22 -22
  34. numcodecs/tests/test_bz2.py +12 -11
  35. numcodecs/tests/test_categorize.py +10 -14
  36. numcodecs/tests/test_checksum32.py +8 -7
  37. numcodecs/tests/test_compat.py +8 -13
  38. numcodecs/tests/test_delta.py +7 -5
  39. numcodecs/tests/test_entrypoints.py +0 -1
  40. numcodecs/tests/test_entrypoints_backport.py +8 -5
  41. numcodecs/tests/test_fixedscaleoffset.py +7 -6
  42. numcodecs/tests/test_fletcher32.py +13 -6
  43. numcodecs/tests/test_gzip.py +12 -11
  44. numcodecs/tests/test_jenkins.py +41 -42
  45. numcodecs/tests/test_json.py +17 -7
  46. numcodecs/tests/test_lz4.py +14 -15
  47. numcodecs/tests/test_lzma.py +15 -14
  48. numcodecs/tests/test_msgpacks.py +10 -8
  49. numcodecs/tests/test_packbits.py +6 -4
  50. numcodecs/tests/test_pcodec.py +80 -0
  51. numcodecs/tests/test_pickles.py +11 -8
  52. numcodecs/tests/test_quantize.py +7 -6
  53. numcodecs/tests/test_registry.py +4 -4
  54. numcodecs/tests/test_shuffle.py +34 -26
  55. numcodecs/tests/test_vlen_array.py +14 -16
  56. numcodecs/tests/test_vlen_bytes.py +13 -8
  57. numcodecs/tests/test_vlen_utf8.py +14 -9
  58. numcodecs/tests/test_zfpy.py +7 -17
  59. numcodecs/tests/test_zlib.py +12 -11
  60. numcodecs/tests/test_zstd.py +32 -16
  61. numcodecs/version.py +2 -2
  62. numcodecs/vlen.cp311-win_amd64.pyd +0 -0
  63. numcodecs/zfpy.py +35 -20
  64. numcodecs/zlib.py +1 -4
  65. numcodecs/zstd.cp311-win_amd64.pyd +0 -0
  66. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/METADATA +8 -5
  67. numcodecs-0.13.1.dist-info/RECORD +74 -0
  68. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/WHEEL +1 -1
  69. numcodecs-0.12.1.dist-info/RECORD +0 -72
  70. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/LICENSE.txt +0 -0
  71. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/top_level.txt +0 -0
numcodecs/version.py CHANGED
@@ -12,5 +12,5 @@ __version__: str
12
12
  __version_tuple__: VERSION_TUPLE
13
13
  version_tuple: VERSION_TUPLE
14
14
 
15
- __version__ = version = '0.12.1'
16
- __version_tuple__ = version_tuple = (0, 12, 1)
15
+ __version__ = version = '0.13.1'
16
+ __version_tuple__ = version_tuple = (0, 13, 1)
Binary file
numcodecs/zfpy.py CHANGED
@@ -1,15 +1,33 @@
1
+ import warnings
1
2
  from contextlib import suppress
3
+ from importlib.metadata import PackageNotFoundError, version
2
4
 
3
5
  _zfpy = None
4
- with suppress(ImportError):
5
- import zfpy as _zfpy
6
6
 
7
+ _zfpy_version: tuple = ()
8
+ with suppress(PackageNotFoundError):
9
+ _zfpy_version = tuple(map(int, version("zfpy").split(".")))
10
+
11
+ if _zfpy_version:
12
+ # Check NumPy version
13
+ _numpy_version: tuple = tuple(map(int, version("numpy").split('.')))
14
+ if _numpy_version >= (2, 0, 0) and _zfpy_version <= (1, 0, 1): # pragma: no cover
15
+ _zfpy_version = ()
16
+ warnings.warn(
17
+ "NumPy version >= 2.0.0 detected. The zfpy library is incompatible with this version of NumPy. "
18
+ "Please downgrade to NumPy < 2.0.0 or wait for an update from zfpy.",
19
+ UserWarning,
20
+ stacklevel=2,
21
+ )
22
+ else:
23
+ with suppress(ImportError):
24
+ import zfpy as _zfpy
7
25
 
8
26
  if _zfpy:
27
+ import numpy as np
9
28
 
10
29
  from .abc import Codec
11
- from .compat import ndarray_copy, ensure_contiguous_ndarray, ensure_bytes
12
- import numpy as np
30
+ from .compat import ensure_bytes, ensure_contiguous_ndarray, ndarray_copy
13
31
 
14
32
  # noinspection PyShadowingBuiltins
15
33
  class ZFPY(Codec):
@@ -52,25 +70,25 @@ if _zfpy:
52
70
  self.precision = precision
53
71
 
54
72
  def encode(self, buf):
55
-
56
73
  # not flatten c-order array and raise exception for f-order array
57
74
  if not isinstance(buf, np.ndarray):
58
- raise TypeError("The zfp codec does not support none numpy arrays."
59
- f" Your buffers were {type(buf)}.")
75
+ raise TypeError(
76
+ "The zfp codec does not support none numpy arrays."
77
+ f" Your buffers were {type(buf)}."
78
+ )
60
79
  if buf.flags.c_contiguous:
61
80
  flatten = False
62
81
  else:
63
- raise ValueError("The zfp codec does not support F order arrays. "
64
- f"Your arrays flags were {buf.flags}.")
82
+ raise ValueError(
83
+ "The zfp codec does not support F order arrays. "
84
+ f"Your arrays flags were {buf.flags}."
85
+ )
65
86
  buf = ensure_contiguous_ndarray(buf, flatten=flatten)
66
87
 
67
88
  # do compression
68
- return _zfpy.compress_numpy(
69
- buf, write_header=True, **self.compression_kwargs
70
- )
89
+ return _zfpy.compress_numpy(buf, write_header=True, **self.compression_kwargs)
71
90
 
72
91
  def decode(self, buf, out=None):
73
-
74
92
  # normalise inputs
75
93
  buf = ensure_bytes(buf)
76
94
  if out is not None:
@@ -86,11 +104,8 @@ if _zfpy:
86
104
  return dec
87
105
 
88
106
  def __repr__(self):
89
- r = "%s(mode=%r, tolerance=%s, rate=%s, precision=%s)" % (
90
- type(self).__name__,
91
- self.mode,
92
- self.tolerance,
93
- self.rate,
94
- self.precision,
107
+ return (
108
+ f"{type(self).__name__}(mode={self.mode!r}, "
109
+ f"tolerance={self.tolerance}, rate={self.rate}, "
110
+ f"precision={self.precision})"
95
111
  )
96
- return r
numcodecs/zlib.py CHANGED
@@ -1,8 +1,7 @@
1
1
  import zlib as _zlib
2
2
 
3
-
4
3
  from .abc import Codec
5
- from .compat import ndarray_copy, ensure_contiguous_ndarray
4
+ from .compat import ensure_contiguous_ndarray, ndarray_copy
6
5
 
7
6
 
8
7
  class Zlib(Codec):
@@ -21,7 +20,6 @@ class Zlib(Codec):
21
20
  self.level = level
22
21
 
23
22
  def encode(self, buf):
24
-
25
23
  # normalise inputs
26
24
  buf = ensure_contiguous_ndarray(buf)
27
25
 
@@ -30,7 +28,6 @@ class Zlib(Codec):
30
28
 
31
29
  # noinspection PyMethodMayBeStatic
32
30
  def decode(self, buf, out=None):
33
-
34
31
  # normalise inputs
35
32
  buf = ensure_contiguous_ndarray(buf)
36
33
  if out is not None:
Binary file
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: numcodecs
3
- Version: 0.12.1
3
+ Version: 0.13.1
4
4
  Summary: A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.
5
5
  Maintainer-email: Alistair Miles <alimanfoo@googlemail.com>
6
6
  License: MIT
@@ -18,31 +18,34 @@ Classifier: Topic :: Software Development :: Libraries :: Python Modules
18
18
  Classifier: Operating System :: Unix
19
19
  Classifier: Programming Language :: Python :: 3
20
20
  Classifier: Programming Language :: Python :: 3 :: Only
21
- Requires-Python: >=3.8
21
+ Requires-Python: >=3.10
22
22
  Description-Content-Type: text/x-rst
23
23
  License-File: LICENSE.txt
24
24
  Requires-Dist: numpy >=1.7
25
25
  Provides-Extra: docs
26
- Requires-Dist: sphinx <7.0.0 ; extra == 'docs'
26
+ Requires-Dist: sphinx ; extra == 'docs'
27
27
  Requires-Dist: sphinx-issues ; extra == 'docs'
28
+ Requires-Dist: pydata-sphinx-theme ; extra == 'docs'
28
29
  Requires-Dist: numpydoc ; extra == 'docs'
29
30
  Requires-Dist: mock ; extra == 'docs'
30
31
  Provides-Extra: msgpack
31
32
  Requires-Dist: msgpack ; extra == 'msgpack'
33
+ Provides-Extra: pcodec
34
+ Requires-Dist: pcodec >=0.2.0 ; extra == 'pcodec'
32
35
  Provides-Extra: test
33
36
  Requires-Dist: coverage ; extra == 'test'
34
- Requires-Dist: flake8 ; extra == 'test'
35
37
  Requires-Dist: pytest ; extra == 'test'
36
38
  Requires-Dist: pytest-cov ; extra == 'test'
37
39
  Provides-Extra: test_extras
38
40
  Requires-Dist: importlib-metadata ; extra == 'test_extras'
39
41
  Provides-Extra: zfpy
40
42
  Requires-Dist: zfpy >=1.0.0 ; extra == 'zfpy'
43
+ Requires-Dist: numpy <2.0.0 ; extra == 'zfpy'
41
44
 
42
45
  Numcodecs
43
46
  =========
44
47
 
45
- Numcodecs is a Python package providing buffer compression and transformation
48
+ Numcodecs is a Python package providing buffer compression and transformation
46
49
  codecs for use in data storage and communication applications.
47
50
 
48
51
  .. image:: https://readthedocs.org/projects/numcodecs/badge/?version=latest
@@ -0,0 +1,74 @@
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+ numcodecs/__init__.py,sha256=7HLiouBg6GIdrvANRbZFmvg6WaML3udAs9AvQa6owYM,3244
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+ numcodecs/abc.py,sha256=9zrXoDcAFapcMRGrSThzyi7hNPKlKFZ0FBSZx2vbUEE,4588
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+ numcodecs/astype.py,sha256=py0m2RrDdDjvEORxWNXaarBE2xKdCkjNWeMf6GCoLg4,2213
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+ numcodecs/base64.py,sha256=E9166xLd0qzo9IZGb3PdP2jENITahjeD6krbochvBX8,811
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+ numcodecs/bitround.py,sha256=RBVQ6-zIIkNs93hnulHXsNkLMhfrYxzlKGZ5zATNUig,2903
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+ numcodecs/bz2.py,sha256=bS0L4XqzJDw6pU4MUuEF8UgFOHw6mErnqCXZVg8TEiI,1219
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+ numcodecs/categorize.py,sha256=EZFF7KyjniCT3LzsitUS3DgJmcNWk1rguTLJemScgJY,3084
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+ numcodecs/delta.py,sha256=O24yAsM2kyugkew3VNH0BWptofzxc8PR-dM_wgiM1mI,2903
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+ numcodecs/fixedscaleoffset.py,sha256=tM3faGimeCC2hzjuyPZU7dfPrSXlIf8kU1rLADUFov0,4328
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+ numcodecs/fletcher32.cp311-win_amd64.pyd,sha256=SIqY5oITBZu3KLIdy9TCNNb9vokg8JXJQ2EsnD0NJ8c,155136
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+ numcodecs/gzip.py,sha256=vPmEDJDkgW14icC-sGeQz1wDUqifhmRBC_B6V-vdEqY,1521
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+ numcodecs/jenkins.cp311-win_amd64.pyd,sha256=y-d6X7Buh_kRQD5zxQzNnQGEsuxnth1_OikZn5ABnnU,144384
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+ numcodecs/json.py,sha256=VtI1U1zEGotH56zVWnAA7UwKWso1Kukwyzy_mopVIgY,3462
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+ numcodecs/lz4.cp311-win_amd64.pyd,sha256=QFekDmZeDAodLANuDigg0oiMwPCJOPkbl5qQw4QZfbE,73216
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+ numcodecs/lzma.py,sha256=hm-dqMUQnZUQlr3liiLZzbsL88EF4mAZ2U_AaZNNoRE,2204
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+ numcodecs/msgpacks.py,sha256=58AVf8VovnBaFaVakLU3dRHodLMsJUlMe6uVaYSwmfY,2697
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+ numcodecs/shuffle.py,sha256=ty-NJ1bIgsErwmTyJtspSgrrJ4PspQjp6Hb-U2M17hY,1636
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+ numcodecs/version.py,sha256=ciZvwdy0HBZeRbI0COvEiydD_yAxHeUwQOeMGUovgCo,429
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+ numcodecs/zfpy.py,sha256=2g_CMrfA8xO53AYjzrE3gOHzIgUF8eKX7rsS2KoKR0Y,3907
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+ numcodecs/tests/test_bitround.py,sha256=mto8z-up4GBPOlEa9vC6pXTNrT0y1OG8Rn9NhUYwp8o,2439
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+ numcodecs/tests/test_entrypoints.py,sha256=poAHVnz9kThz2X1X2DTEw7J9xcCfPCjAqo4ZfQ8wcnw,530
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+ numcodecs/tests/test_packbits.py,sha256=UWXpYyaHLybqOHgZgVTP_5VeibGO09CyJyKSO_mTCeI,1028
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+ numcodecs/tests/test_pcodec.py,sha256=RGd-jmzi0LtfmJP4Q68Fk8Rxu1glwHCndpObWjwbfxQ,2108
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+ numcodecs/tests/test_pickles.py,sha256=zhmZPPiCgW3uFArYvixgiMPWXdmKjnCj0JThUDt8nn4,1740
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+ numcodecs/tests/test_quantize.py,sha256=muD4zwQSa4XM4jPO3qXu8rMdoU4eHCpVfQ8z0G7Zh-U,2227
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+ numcodecs/tests/test_registry.py,sha256=VJI2qPYVzUe3svD-fNFutNz246B2PT3QdvOjiFRowH0,1103
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@@ -1,5 +1,5 @@
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1
  Wheel-Version: 1.0
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- Generator: bdist_wheel (0.41.2)
2
+ Generator: setuptools (75.1.0)
3
3
  Root-Is-Purelib: false
4
4
  Tag: cp311-cp311-win_amd64
5
5
 
@@ -1,72 +0,0 @@
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