numcodecs 0.12.1__cp311-cp311-macosx_11_0_arm64.whl → 0.13.1__cp311-cp311-macosx_11_0_arm64.whl

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Files changed (71) hide show
  1. numcodecs/__init__.py +33 -7
  2. numcodecs/_shuffle.cpython-311-darwin.so +0 -0
  3. numcodecs/abc.py +4 -6
  4. numcodecs/astype.py +2 -10
  5. numcodecs/bitround.py +0 -1
  6. numcodecs/blosc.cpython-311-darwin.so +0 -0
  7. numcodecs/bz2.py +1 -4
  8. numcodecs/categorize.py +12 -18
  9. numcodecs/checksum32.py +3 -8
  10. numcodecs/compat.py +6 -12
  11. numcodecs/compat_ext.cpython-311-darwin.so +0 -0
  12. numcodecs/delta.py +4 -11
  13. numcodecs/fixedscaleoffset.py +5 -9
  14. numcodecs/fletcher32.cpython-311-darwin.so +0 -0
  15. numcodecs/gzip.py +1 -5
  16. numcodecs/jenkins.cpython-311-darwin.so +0 -0
  17. numcodecs/json.py +35 -18
  18. numcodecs/lz4.cpython-311-darwin.so +0 -0
  19. numcodecs/lzma.py +9 -10
  20. numcodecs/msgpacks.py +13 -12
  21. numcodecs/ndarray_like.py +11 -16
  22. numcodecs/packbits.py +1 -4
  23. numcodecs/pcodec.py +89 -0
  24. numcodecs/pickles.py +2 -3
  25. numcodecs/quantize.py +7 -11
  26. numcodecs/registry.py +4 -8
  27. numcodecs/shuffle.py +5 -7
  28. numcodecs/tests/common.py +42 -32
  29. numcodecs/tests/package_with_entrypoint/__init__.py +0 -1
  30. numcodecs/tests/test_astype.py +7 -7
  31. numcodecs/tests/test_base64.py +10 -13
  32. numcodecs/tests/test_bitround.py +0 -1
  33. numcodecs/tests/test_blosc.py +22 -22
  34. numcodecs/tests/test_bz2.py +12 -11
  35. numcodecs/tests/test_categorize.py +10 -14
  36. numcodecs/tests/test_checksum32.py +8 -7
  37. numcodecs/tests/test_compat.py +8 -13
  38. numcodecs/tests/test_delta.py +7 -5
  39. numcodecs/tests/test_entrypoints.py +0 -1
  40. numcodecs/tests/test_entrypoints_backport.py +8 -5
  41. numcodecs/tests/test_fixedscaleoffset.py +7 -6
  42. numcodecs/tests/test_fletcher32.py +13 -6
  43. numcodecs/tests/test_gzip.py +12 -11
  44. numcodecs/tests/test_jenkins.py +41 -42
  45. numcodecs/tests/test_json.py +17 -7
  46. numcodecs/tests/test_lz4.py +14 -15
  47. numcodecs/tests/test_lzma.py +15 -14
  48. numcodecs/tests/test_msgpacks.py +10 -8
  49. numcodecs/tests/test_packbits.py +6 -4
  50. numcodecs/tests/test_pcodec.py +80 -0
  51. numcodecs/tests/test_pickles.py +11 -8
  52. numcodecs/tests/test_quantize.py +7 -6
  53. numcodecs/tests/test_registry.py +4 -4
  54. numcodecs/tests/test_shuffle.py +34 -26
  55. numcodecs/tests/test_vlen_array.py +14 -16
  56. numcodecs/tests/test_vlen_bytes.py +13 -8
  57. numcodecs/tests/test_vlen_utf8.py +14 -9
  58. numcodecs/tests/test_zfpy.py +7 -17
  59. numcodecs/tests/test_zlib.py +12 -11
  60. numcodecs/tests/test_zstd.py +32 -16
  61. numcodecs/version.py +2 -2
  62. numcodecs/vlen.cpython-311-darwin.so +0 -0
  63. numcodecs/zfpy.py +35 -20
  64. numcodecs/zlib.py +1 -4
  65. numcodecs/zstd.cpython-311-darwin.so +0 -0
  66. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/METADATA +8 -5
  67. numcodecs-0.13.1.dist-info/RECORD +74 -0
  68. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/WHEEL +1 -1
  69. numcodecs-0.12.1.dist-info/RECORD +0 -72
  70. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/LICENSE.txt +0 -0
  71. {numcodecs-0.12.1.dist-info → numcodecs-0.13.1.dist-info}/top_level.txt +0 -0
numcodecs/version.py CHANGED
@@ -12,5 +12,5 @@ __version__: str
12
12
  __version_tuple__: VERSION_TUPLE
13
13
  version_tuple: VERSION_TUPLE
14
14
 
15
- __version__ = version = '0.12.1'
16
- __version_tuple__ = version_tuple = (0, 12, 1)
15
+ __version__ = version = '0.13.1'
16
+ __version_tuple__ = version_tuple = (0, 13, 1)
Binary file
numcodecs/zfpy.py CHANGED
@@ -1,15 +1,33 @@
1
+ import warnings
1
2
  from contextlib import suppress
3
+ from importlib.metadata import PackageNotFoundError, version
2
4
 
3
5
  _zfpy = None
4
- with suppress(ImportError):
5
- import zfpy as _zfpy
6
6
 
7
+ _zfpy_version: tuple = ()
8
+ with suppress(PackageNotFoundError):
9
+ _zfpy_version = tuple(map(int, version("zfpy").split(".")))
10
+
11
+ if _zfpy_version:
12
+ # Check NumPy version
13
+ _numpy_version: tuple = tuple(map(int, version("numpy").split('.')))
14
+ if _numpy_version >= (2, 0, 0) and _zfpy_version <= (1, 0, 1): # pragma: no cover
15
+ _zfpy_version = ()
16
+ warnings.warn(
17
+ "NumPy version >= 2.0.0 detected. The zfpy library is incompatible with this version of NumPy. "
18
+ "Please downgrade to NumPy < 2.0.0 or wait for an update from zfpy.",
19
+ UserWarning,
20
+ stacklevel=2,
21
+ )
22
+ else:
23
+ with suppress(ImportError):
24
+ import zfpy as _zfpy
7
25
 
8
26
  if _zfpy:
27
+ import numpy as np
9
28
 
10
29
  from .abc import Codec
11
- from .compat import ndarray_copy, ensure_contiguous_ndarray, ensure_bytes
12
- import numpy as np
30
+ from .compat import ensure_bytes, ensure_contiguous_ndarray, ndarray_copy
13
31
 
14
32
  # noinspection PyShadowingBuiltins
15
33
  class ZFPY(Codec):
@@ -52,25 +70,25 @@ if _zfpy:
52
70
  self.precision = precision
53
71
 
54
72
  def encode(self, buf):
55
-
56
73
  # not flatten c-order array and raise exception for f-order array
57
74
  if not isinstance(buf, np.ndarray):
58
- raise TypeError("The zfp codec does not support none numpy arrays."
59
- f" Your buffers were {type(buf)}.")
75
+ raise TypeError(
76
+ "The zfp codec does not support none numpy arrays."
77
+ f" Your buffers were {type(buf)}."
78
+ )
60
79
  if buf.flags.c_contiguous:
61
80
  flatten = False
62
81
  else:
63
- raise ValueError("The zfp codec does not support F order arrays. "
64
- f"Your arrays flags were {buf.flags}.")
82
+ raise ValueError(
83
+ "The zfp codec does not support F order arrays. "
84
+ f"Your arrays flags were {buf.flags}."
85
+ )
65
86
  buf = ensure_contiguous_ndarray(buf, flatten=flatten)
66
87
 
67
88
  # do compression
68
- return _zfpy.compress_numpy(
69
- buf, write_header=True, **self.compression_kwargs
70
- )
89
+ return _zfpy.compress_numpy(buf, write_header=True, **self.compression_kwargs)
71
90
 
72
91
  def decode(self, buf, out=None):
73
-
74
92
  # normalise inputs
75
93
  buf = ensure_bytes(buf)
76
94
  if out is not None:
@@ -86,11 +104,8 @@ if _zfpy:
86
104
  return dec
87
105
 
88
106
  def __repr__(self):
89
- r = "%s(mode=%r, tolerance=%s, rate=%s, precision=%s)" % (
90
- type(self).__name__,
91
- self.mode,
92
- self.tolerance,
93
- self.rate,
94
- self.precision,
107
+ return (
108
+ f"{type(self).__name__}(mode={self.mode!r}, "
109
+ f"tolerance={self.tolerance}, rate={self.rate}, "
110
+ f"precision={self.precision})"
95
111
  )
96
- return r
numcodecs/zlib.py CHANGED
@@ -1,8 +1,7 @@
1
1
  import zlib as _zlib
2
2
 
3
-
4
3
  from .abc import Codec
5
- from .compat import ndarray_copy, ensure_contiguous_ndarray
4
+ from .compat import ensure_contiguous_ndarray, ndarray_copy
6
5
 
7
6
 
8
7
  class Zlib(Codec):
@@ -21,7 +20,6 @@ class Zlib(Codec):
21
20
  self.level = level
22
21
 
23
22
  def encode(self, buf):
24
-
25
23
  # normalise inputs
26
24
  buf = ensure_contiguous_ndarray(buf)
27
25
 
@@ -30,7 +28,6 @@ class Zlib(Codec):
30
28
 
31
29
  # noinspection PyMethodMayBeStatic
32
30
  def decode(self, buf, out=None):
33
-
34
31
  # normalise inputs
35
32
  buf = ensure_contiguous_ndarray(buf)
36
33
  if out is not None:
Binary file
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: numcodecs
3
- Version: 0.12.1
3
+ Version: 0.13.1
4
4
  Summary: A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.
5
5
  Maintainer-email: Alistair Miles <alimanfoo@googlemail.com>
6
6
  License: MIT
@@ -18,31 +18,34 @@ Classifier: Topic :: Software Development :: Libraries :: Python Modules
18
18
  Classifier: Operating System :: Unix
19
19
  Classifier: Programming Language :: Python :: 3
20
20
  Classifier: Programming Language :: Python :: 3 :: Only
21
- Requires-Python: >=3.8
21
+ Requires-Python: >=3.10
22
22
  Description-Content-Type: text/x-rst
23
23
  License-File: LICENSE.txt
24
24
  Requires-Dist: numpy >=1.7
25
25
  Provides-Extra: docs
26
- Requires-Dist: sphinx <7.0.0 ; extra == 'docs'
26
+ Requires-Dist: sphinx ; extra == 'docs'
27
27
  Requires-Dist: sphinx-issues ; extra == 'docs'
28
+ Requires-Dist: pydata-sphinx-theme ; extra == 'docs'
28
29
  Requires-Dist: numpydoc ; extra == 'docs'
29
30
  Requires-Dist: mock ; extra == 'docs'
30
31
  Provides-Extra: msgpack
31
32
  Requires-Dist: msgpack ; extra == 'msgpack'
33
+ Provides-Extra: pcodec
34
+ Requires-Dist: pcodec >=0.2.0 ; extra == 'pcodec'
32
35
  Provides-Extra: test
33
36
  Requires-Dist: coverage ; extra == 'test'
34
- Requires-Dist: flake8 ; extra == 'test'
35
37
  Requires-Dist: pytest ; extra == 'test'
36
38
  Requires-Dist: pytest-cov ; extra == 'test'
37
39
  Provides-Extra: test_extras
38
40
  Requires-Dist: importlib-metadata ; extra == 'test_extras'
39
41
  Provides-Extra: zfpy
40
42
  Requires-Dist: zfpy >=1.0.0 ; extra == 'zfpy'
43
+ Requires-Dist: numpy <2.0.0 ; extra == 'zfpy'
41
44
 
42
45
  Numcodecs
43
46
  =========
44
47
 
45
- Numcodecs is a Python package providing buffer compression and transformation
48
+ Numcodecs is a Python package providing buffer compression and transformation
46
49
  codecs for use in data storage and communication applications.
47
50
 
48
51
  .. image:: https://readthedocs.org/projects/numcodecs/badge/?version=latest
@@ -0,0 +1,74 @@
1
+ numcodecs-0.13.1.dist-info/RECORD,,
2
+ numcodecs-0.13.1.dist-info/WHEEL,sha256=PF0Mgwtv_oDs_mWYUtLpGhYaIa8jOhCqBxSqdxy2gqE,109
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+ numcodecs-0.13.1.dist-info/top_level.txt,sha256=JkHllzt6IuVudg4Tk--wF-yfPPsdVOiMTag1tjGIihw,10
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+ numcodecs-0.13.1.dist-info/LICENSE.txt,sha256=lJysaEeeE7bJeSRjUVC04e9eaXZq2eRy6oWgjBV2u5Y,1124
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+ numcodecs-0.13.1.dist-info/METADATA,sha256=6RpdX2_nPC23BntpRTEMveVtMnhchKj7Eb8HeMbDeFQ,2933
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+ numcodecs/compat_ext.cpython-311-darwin.so,sha256=9Rn1hHSMNaeZQdllsPSXxgMxNjrQBxMjan8N-jPx1K4,78720
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+ numcodecs/lzma.py,sha256=8wYnJzWCi_SlQW_vhGOwChO0crYQSEbLHGNAvO-zHfs,2135
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+ numcodecs/fletcher32.cpython-311-darwin.so,sha256=-lV8mBMAWX11BhQDd1OoujGqDEc4X_UDLoGseYaE2oo,206032
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+ numcodecs/astype.py,sha256=0M9nV2Jb-8EwyoZGmOhCssaBvMej_B6hQ2p41VkmDdA,2137
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+ numcodecs/gzip.py,sha256=7TyUzc9oliPqKA58VV7fNkCi_c9PP04MioAKG7a1oV0,1469
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+ numcodecs/base64.py,sha256=i-WpnY7A-vT-71By_tVBvHi41O4DzuqYyB829eNd29E,784
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+ numcodecs/bz2.py,sha256=4Ups3IMVsjvBlXyaeYONPdE14TaK9V-4LH5LSNe7AGc,1174
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+ numcodecs/version.py,sha256=2tfL_x7--SF9Szc7f-1EYHtdawpHz4gvIzw8B6TKeRA,413
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+ numcodecs/compat.py,sha256=jBKRckLkgVXf3M7sZwpu7l0REtYkydxkMQDaMeczCmE,6513
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+ numcodecs/checksum32.py,sha256=QAum8WwnDwzt1b6E_awZwNxHjqHzQl3526MePct1A6w,3158
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+ numcodecs/ndarray_like.py,sha256=hf94ErUEodzVUG3l2D8NWkhmbwDfF0dhR15drpn5S40,1866
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+ numcodecs/quantize.py,sha256=WNgbVPNR6CnaF58yBbVHIQ_jg1mBe8dirkZ2ErNpQOI,3037
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+ numcodecs/registry.py,sha256=IgYSlM-tIYxQ4ZZAasf33twddYqjAOZhk5zlcfIhkks,1763
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+ numcodecs/pickles.py,sha256=qWNRLnWZnZ9nq_QhNNI2x-s1Uoq9Eq1lsgwCSRTTxJo,1288
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+ numcodecs/fixedscaleoffset.py,sha256=3J5JWZcE13lAJz9axSEpTUpAC9H-yI2RBOX8oGhtwns,4196
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+ numcodecs/__init__.py,sha256=zwD__WYuAknEKLbBPdqqa7zlpQCe86UKhcxxSdRAsWI,3101
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+ numcodecs/bitround.py,sha256=l0Na1MkqNvUIA6emP0HklWT-JGsxPqjeZ2h1HtXXHv8,2824
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+ numcodecs/zlib.py,sha256=gLPUICEQc5p6DICC_63nOsbUqxzJH_5ynuzenTQXzOQ,1049
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+ numcodecs/shuffle.py,sha256=hYOFJOCEeDSNI-TqT1JrbQxbprkQD4R8VfSzD4IPI3I,1575
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+ numcodecs/blosc.cpython-311-darwin.so,sha256=A0Uwo1yOhJH_SB2vM4rgD1l-KPaalJYAFHTMib_ZNDk,1057864
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+ numcodecs/lz4.cpython-311-darwin.so,sha256=7lu_QEpO-r4qQDMR-Qsv4_xlZryQsPEZpqfhJg8mfFQ,248600
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+ numcodecs/delta.py,sha256=RvjPnBK-6PR0K_Cb0B12pdJzQdE5JRDKhnJIU9VxMRo,2806
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+ numcodecs/vlen.cpython-311-darwin.so,sha256=91HHmDCdi-BMYrtJcaUUm6fLrVnwmREUNEoP0BFao5U,261368
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+ numcodecs/zfpy.py,sha256=E4a182gFNWnwKMv9jhjMpKgDl56CrcQfZ2DugYICCPs,3796
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+ numcodecs/msgpacks.py,sha256=sd3uuMN1wQz9XecP8eZOQY-huqbjC6BlOzx4NsJ95kY,2611
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+ numcodecs/jenkins.cpython-311-darwin.so,sha256=xO5xBQKjpoXoJ1q37Y1b8OIJWfEqYY9e4bEHMioWjgs,187040
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+ numcodecs/packbits.py,sha256=Vm5Nvah68zShRRBuAQBrKtq8gLpYw3mP8O2qe0ndIUU,2031
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+ numcodecs/categorize.py,sha256=yUzeAuPTNbMiI2vhkPRcxpEi0yQnr1orFs_I_BVoEoo,2983
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+ numcodecs/zstd.cpython-311-darwin.so,sha256=S_WxNSNMJLNQTyVMtxJVDVg_T6du-68Jl6FCD4oUFkA,731272
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+ numcodecs/json.py,sha256=Xu4dN-FydFaV-5jOewJxVBsV6rUfGUWIp4IncrjIR-E,3355
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+ numcodecs/_shuffle.cpython-311-darwin.so,sha256=9YdnX2ABftYmGMciyt3nkgTOKe_4ChgRdD1W07XkgxE,182560
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+ numcodecs/abc.py,sha256=Bi34cxGfgi3E7MxE3ZghWag5EB3swZuqi5_pkCIjCgo,4462
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+ numcodecs/pcodec.py,sha256=7fOqhKUWURCbfbQFoEy8772UGna59F6v_6k_4QJrzZg,3079
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+ numcodecs/tests/test_bitround.py,sha256=enJTj9BLkH0f0NH6QdMuPDTTJxEpR3GyKO-erC5_G7g,2358
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+ numcodecs/tests/test_gzip.py,sha256=I685q0_vu3b_JibUz3nhW1mQtlLSQzGdgGD2twbGPXc,2925
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+ numcodecs/tests/test_delta.py,sha256=njQay9mt8Evu8tB9eB3iUgtl0x_UfQx3ol3iwhWz8zk,1570
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+ numcodecs/tests/test_lzma.py,sha256=WjZNlHEWdT2Ess5_L2AAt8fdpZa8UIKVNqrh4m9hlWU,2635
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+ numcodecs/tests/test_bz2.py,sha256=pefO_YlOLr-RIswHas8DAQ4j81jhqLT5XGEuQ2i8DtI,1889
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+ numcodecs/tests/__init__.py,sha256=Q6sNFjGUjcEU3MvCUd-PDtmYcS79Yvys3wbWWXvU5qY,72
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+ numcodecs/tests/test_quantize.py,sha256=KvOyoj-u4S_-z8pT4syR6yE4i1ftFGkRfCTmgafumGw,2151
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+ numcodecs/tests/test_entrypoints_backport.py,sha256=kD_s7ggoU-zf5ywsXhtf-v7y-eV4T7BRhcHS1frkO1s,1041
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+ numcodecs/tests/test_pcodec.py,sha256=f7P82MoilQmWxmuspBNiA_7rjNtJ_WsVGpNSWpypIvA,2028
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+ numcodecs/tests/test_lz4.py,sha256=63bjnBmT-bHCduj9w_LRTkJKBvo8emBzwVpzoDC5-A0,2353
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+ numcodecs/tests/test_msgpacks.py,sha256=qcWCSXA1DhKxa9_ruOCWCaXw8PZnz8cvnpDieATfZZ4,3834
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+ numcodecs/tests/test_astype.py,sha256=Wu1HtHZA6K_rW-JCxSWmU4Wwp9U83JUbUZ2ro9xDk9s,2367
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+ numcodecs/tests/test_jenkins.py,sha256=DoOXdTLD25aXA0nwiO1zk_vG4N2UI6Wc3C72yqIByNc,4446
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+ numcodecs/tests/test_fletcher32.py,sha256=hNf2zSAi16k4222qI2k-n5X4GgswVBfOqvKHSgSoRxQ,1456
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+ numcodecs/tests/test_packbits.py,sha256=8B2sQnM-DiAEtehCEm5xm7fQ1xWm0rMk_z7Uk8OXvGI,989
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+ numcodecs/tests/common.py,sha256=cLiS3SwUORLL0N8Yx4TjqgrB7Y9nwxx_5-T2qL0vqD0,12168
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+ numcodecs/tests/test_base64.py,sha256=QseE5-aDwz7yv5-0dAG_6vTjeN3OpFvgcg8IhklRA4Y,2315
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+ numcodecs/tests/test_shuffle.py,sha256=2aDDN9X61oaTINBW-BgY_Pp8Uc60QnJnAwsOl4XYzxg,4697
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+ numcodecs/tests/test_fixedscaleoffset.py,sha256=ShOETVOAxABLp_c8g8KeJZmtv3EGbXBxfiPAgklJqaQ,2247
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+ numcodecs/tests/test_compat.py,sha256=xmpCvkB0pWnHIvhoXpQH37b6EIchza1AHd49lpb4tXk,3617
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+ numcodecs/tests/test_zlib.py,sha256=TFa-I15xHd4h2nNC2goChWdlB_xZLbK_vAL7s4upPWI,2539
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+ numcodecs/tests/test_json.py,sha256=gT0D55oLGCtj_y-BECTwV13NOc2AXSyGsgAwBntvTfo,2288
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@@ -1,5 +1,5 @@
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1
  Wheel-Version: 1.0
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- Generator: bdist_wheel (0.41.2)
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+ Generator: setuptools (75.1.0)
3
3
  Root-Is-Purelib: false
4
4
  Tag: cp311-cp311-macosx_11_0_arm64
5
5
 
@@ -1,72 +0,0 @@
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