np_codeocean 0.3.6__py3-none-any.whl → 0.3.7__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {np_codeocean-0.3.6.dist-info → np_codeocean-0.3.7.dist-info}/METADATA +27 -2
- {np_codeocean-0.3.6.dist-info → np_codeocean-0.3.7.dist-info}/RECORD +5 -5
- {np_codeocean-0.3.6.dist-info → np_codeocean-0.3.7.dist-info}/WHEEL +0 -0
- {np_codeocean-0.3.6.dist-info → np_codeocean-0.3.7.dist-info}/entry_points.txt +0 -0
- {np_codeocean-0.3.6.dist-info → np_codeocean-0.3.7.dist-info}/top_level.txt +0 -0
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Metadata-Version: 2.4
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Name: np_codeocean
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Version: 0.3.
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Version: 0.3.7
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Summary: Tools for uploading and interacting with Mindscope Neuropixels experiments on Code Ocean
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Author-email: Ben Hardcastle <ben.hardcastle@alleninstitute.org>, Chris Mochizuki <chrism@alleninstitute.org>, Arjun Sridhar <arjun.sridhar@alleninstitute.org>
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License: MIT
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@@ -32,9 +32,11 @@ Provides-Extra: dev
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Requires-Dist: bump>=1.3.2; extra == "dev"
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Provides-Extra: dynamicrouting
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Requires-Dist: npc-lims>=0.1.154; extra == "dynamicrouting"
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Requires-Dist: npc-sessions>=0.0.
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Requires-Dist: npc-sessions>=0.0.273; extra == "dynamicrouting"
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Requires-Dist: aind-codeocean-pipeline-monitor[full]>=0.5.0; extra == "dynamicrouting"
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Requires-Dist: aind-metadata-mapper==0.18.2; extra == "dynamicrouting"
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Provides-Extra: openscope
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Requires-Dist: aind-metadata-mapper==0.18.1; extra == "openscope"
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# np_codeocean
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Tools for uploading Mindscope Neuropixels experiments to S3 (for Code Ocean).
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@@ -42,6 +44,29 @@ Tools for uploading Mindscope Neuropixels experiments to S3 (for Code Ocean).
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Requires running as admin on Windows in order to create remote-to-remote symlinks
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on the Isilon.
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## Install
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For Dynamic Routing:
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```shell
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uv sync --extra dynamicrouting
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```
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For OpenScope:
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```shell
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uv sync --extra openscope
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```
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## Add dependencies
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For shared utilities:
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```shell
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uv add <package-name>
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```
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For Dynamic Routing or OpenScope specific utilities:
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```shell
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uv add <package-name> --optional <dynamicrouting|openscope>
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```
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## Usage
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- `upload` CLI tool is provided, which uses the
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[`np_session`](https://github.com/AllenInstitute/np_session) interface to find
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and upload
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@@ -16,8 +16,8 @@ np_codeocean/metadata/model_templates/neuropixels_rig.py,sha256=bNVnuA3ta9S0luwY
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np_codeocean/scripts/upload_dynamic_routing_behavior.py,sha256=O5NVcPfjTjBCr6nQudoG9Ae0iVfCLweG5v9OuMh6WD4,17285
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np_codeocean/scripts/upload_dynamic_routing_ecephys.py,sha256=brqYJKH1i5hYRWuUn97aDrFmZo7oCkay080Cxg57sQo,10598
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np_codeocean/scripts/upload_split_recordings_example.py,sha256=P-sqZYbGDdHCCsyvBOIZbGE7Wl8qzih1mBCXaRbyU_g,1479
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np_codeocean-0.3.
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np_codeocean-0.3.
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np_codeocean-0.3.
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np_codeocean-0.3.
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np_codeocean-0.3.
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np_codeocean-0.3.7.dist-info/METADATA,sha256=8euKZp8UeMe91SYP0qlLKEhJIgXPxhgeSHNgvlW2Ip4,3574
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np_codeocean-0.3.7.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
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np_codeocean-0.3.7.dist-info/entry_points.txt,sha256=amIcPQMDvpAFwEKWIxsPSUNarfqQTCpZnFXp0CQUYWw,234
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np_codeocean-0.3.7.dist-info/top_level.txt,sha256=8VaE78lNdJcexaBdvtl5tMgsvD42Nfg0xplSPst4jHI,13
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np_codeocean-0.3.7.dist-info/RECORD,,
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File without changes
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File without changes
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File without changes
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