nmdc-schema 11.11.1__py3-none-any.whl → 11.12.0__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- nmdc_schema/migration_recursion.py +2 -0
- nmdc_schema/migrators/cli/run_migrator.py +10 -14
- nmdc_schema/migrators/helpers.py +24 -0
- nmdc_schema/migrators/migrator_from_11_11_0_to_11_12_0.py +35 -0
- nmdc_schema/migrators/partials/migrator_from_11_11_0_to_11_12_0/__init__.py +28 -0
- nmdc_schema/migrators/partials/migrator_from_11_11_0_to_11_12_0/migrator_from_11_11_0_to_11_12_0_part_1.py +187 -0
- nmdc_schema/migrators/partials/migrator_from_11_11_0_to_11_12_0/migrator_from_11_11_0_to_11_12_0_part_2.py +113 -0
- nmdc_schema/nmdc-pydantic.py +901 -346
- nmdc_schema/nmdc.py +283 -50
- nmdc_schema/nmdc.schema.json +185 -17
- nmdc_schema/nmdc_materialized_patterns.json +1487 -244
- nmdc_schema/nmdc_materialized_patterns.schema.json +185 -17
- nmdc_schema/nmdc_materialized_patterns.yaml +1194 -210
- nmdc_schema/nmdc_schema_validation_plugin.py +103 -0
- {nmdc_schema-11.11.1.dist-info → nmdc_schema-11.12.0.dist-info}/METADATA +1 -1
- {nmdc_schema-11.11.1.dist-info → nmdc_schema-11.12.0.dist-info}/RECORD +19 -14
- {nmdc_schema-11.11.1.dist-info → nmdc_schema-11.12.0.dist-info}/WHEEL +1 -1
- {nmdc_schema-11.11.1.dist-info → nmdc_schema-11.12.0.dist-info}/entry_points.txt +8 -0
- {nmdc_schema-11.11.1.dist-info → nmdc_schema-11.12.0.dist-info}/licenses/LICENSE +0 -0
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@@ -6,7 +6,7 @@
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"not importing any MIxS terms where the relationship between the name (SCN) and the id isn't 1:1"
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],
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"id": "https://w3id.org/nmdc/nmdc",
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"version": "11.
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"version": "11.12.0",
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"license": "https://creativecommons.org/publicdomain/zero/1.0/",
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"prefixes": {
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"BFO": {
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@@ -417,47 +417,6 @@
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"default_prefix": "nmdc",
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"default_range": "string",
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"types": {
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"external_identifier": {
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"name": "external_identifier",
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"description": "A CURIE representing an external identifier",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"https://microbiomedata.github.io/nmdc-schema/identifiers/"
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],
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"typeof": "uriorcurie",
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"uri": "xsd:anyURI",
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"pattern": "^[a-zA-Z0-9][a-zA-Z0-9_\\.]+:[a-zA-Z0-9_][a-zA-Z0-9_\\-\\/\\.,]*$"
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},
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"bytes": {
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"name": "bytes",
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"description": "An integer value that corresponds to a size in bytes",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"UO:0000233"
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],
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"base": "int",
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"uri": "xsd:long"
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},
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"decimal_degree": {
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"name": "decimal_degree",
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"description": "A decimal degree expresses latitude or longitude as decimal fractions.",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"https://en.wikipedia.org/wiki/Decimal_degrees"
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],
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"base": "float",
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"uri": "xsd:decimal"
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},
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"language_code": {
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"name": "language_code",
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"description": "A language code conforming to ISO_639-1",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"https://en.wikipedia.org/wiki/ISO_639-1"
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],
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"base": "str",
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"uri": "xsd:language"
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},
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"string": {
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"name": "string",
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"description": "A character string",
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"base": "str",
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"uri": "xsd:string",
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"repr": "str"
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},
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"external_identifier": {
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"name": "external_identifier",
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"description": "A CURIE representing an external identifier",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"https://microbiomedata.github.io/nmdc-schema/identifiers/"
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],
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"typeof": "uriorcurie",
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"uri": "xsd:anyURI",
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"pattern": "^[a-zA-Z0-9][a-zA-Z0-9_\\.]+:[a-zA-Z0-9_][a-zA-Z0-9_\\-\\/\\.,]*$"
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},
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"bytes": {
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"name": "bytes",
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"description": "An integer value that corresponds to a size in bytes",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"UO:0000233"
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],
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"base": "int",
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"uri": "xsd:long"
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},
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"decimal_degree": {
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"name": "decimal_degree",
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"description": "A decimal degree expresses latitude or longitude as decimal fractions.",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"https://en.wikipedia.org/wiki/Decimal_degrees"
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],
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"base": "float",
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"uri": "xsd:decimal"
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},
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"language_code": {
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"name": "language_code",
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"description": "A language code conforming to ISO_639-1",
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"see_also": [
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"https://en.wikipedia.org/wiki/ISO_639-1"
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],
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"base": "str",
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"uri": "xsd:language"
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}
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},
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"enums": {
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"J/K": {
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"text": "J/K",
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"description": "The Unified Code for Units of Measure (UCUM) representation of joule per kelvin.",
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"title": "J/degree Celsius",
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"comments": [
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"UCUM-compliant unit for energy per temperature. J/Cel deprecated due to non-ratio temperature unit."
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],
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"aliases": [
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"joule per kelvin",
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"joules per kelvin",
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"J/Kelvin",
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"J/Celvin",
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"J/Cel",
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"J/C"
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]
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},
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"Cel": {
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"text": "Cel",
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"description": "The Unified Code for Units of Measure (UCUM) representation of degrees Celsius; a SI unit of temperature equal to one unit Kelvin.",
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"title": "degrees Celsius",
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"aliases": [
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"Celsius",
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"C",
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"text": "cm",
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"description": "The Unified Code for Units of Measure (UCUM) representation of centimeter."
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},
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"cP": {
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"text": "cP",
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"description": "The Unified Code for Units of Measure (UCUM) representation of centipoise.",
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"aliases": [
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"centipoise",
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"centiPoise"
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]
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},
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"d": {
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"text": "d",
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"description": "The Unified Code for Units of Measure (UCUM) representation of day.",
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"[ppm]": {
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"text": "[ppm]",
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"description": "The Unified Code for Units of Measure (UCUM) representation of parts per million.",
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"see_also": [
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"https://terminology.hl7.org/5.1.0/ValueSet-v3-UnitsOfMeasureCaseSensitive.html",
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"https://ucum.org/ucum"
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],
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"aliases": [
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"a": {
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"text": "a",
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"description": "The Unified Code for Units of Measure (UCUM) representation of year.",
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"title": "years",
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"aliases": [
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"umol/m2/s": {
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"text": "umol/m2/s",
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"description": "The Unified Code for Units of Measure (UCUM) representation of micromoles per square meter per second.",
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"title": "micromoles per square meter per second",
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"aliases": [
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"mg/m3": {
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"description": "The Unified Code for Units of Measure (UCUM) representation of atmosphere."
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"V": {
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"text": "V",
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"description": "The Unified Code for Units of Measure (UCUM) representation of volt."
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"mV": {
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"text": "mV",
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"description": "The Unified Code for Units of Measure (UCUM) representation of millivolt."
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"description": "The Unified Code for Units of Measure (UCUM) representation of practical salinity unit."
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"L": {
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"text": "L",
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"description": "The Unified Code for Units of Measure (UCUM) representation of liter."
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"description": "The Unified Code for Units of Measure (UCUM) representation of year."
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"1": {
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"text": "1",
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"description": "The Unified Code for Units of Measure (UCUM) representation of dimensionless quantity."
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"description": "The Unified Code for Units of Measure (UCUM) representation of dimensionless quantity.",
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"title": "ratio/unitless",
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"comments": [
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"aliases": [
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"uL/kg": {
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"description": "The Unified Code for Units of Measure (UCUM) representation of kilogram."
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"text": "[ppth]",
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"lx": {
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"text": "lx",
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"description": "The Unified Code for Units of Measure (UCUM) representation of lux.",
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"title": "lux",
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"1/d": {
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"kHz": {
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"mbar": {
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"text": "mbar",
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"description": "The Unified Code for Units of Measure (UCUM) representation of millibar."
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|
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2254
|
-
"text": "J/Cel",
|
|
2255
|
-
"description": "The Unified Code for Units of Measure (UCUM) representation of joules per Celsius."
|
|
2256
|
-
},
|
|
2257
|
-
"uE/m2/s": {
|
|
2258
|
-
"text": "uE/m2/s",
|
|
2259
|
-
"description": "The Unified Code for Units of Measure (UCUM) representation of microeinsteins per square meter per second.",
|
|
2260
|
-
"aliases": [
|
|
2261
|
-
"[arb'U]{micro_Einstein}/m2/s"
|
|
2262
|
-
]
|
|
2263
|
-
},
|
|
2264
2282
|
"kW/m2": {
|
|
2265
2283
|
"text": "kW/m2",
|
|
2266
2284
|
"description": "The Unified Code for Units of Measure (UCUM) representation of kilowatts per square meter."
|
|
2267
2285
|
},
|
|
2268
|
-
"people": {
|
|
2269
|
-
"text": "people",
|
|
2270
|
-
"description": "The Unified Code for Units of Measure (UCUM) representation of people count."
|
|
2271
|
-
},
|
|
2272
|
-
"pets": {
|
|
2273
|
-
"text": "pets",
|
|
2274
|
-
"description": "The Unified Code for Units of Measure (UCUM) representation of pet count."
|
|
2275
|
-
},
|
|
2276
|
-
"plants": {
|
|
2277
|
-
"text": "plants",
|
|
2278
|
-
"description": "The Unified Code for Units of Measure (UCUM) representation of plant count."
|
|
2279
|
-
},
|
|
2280
2286
|
"umol/s/m2": {
|
|
2281
2287
|
"text": "umol/s/m2",
|
|
2282
2288
|
"description": "The Unified Code for Units of Measure (UCUM) representation of micromoles per second per square meter.",
|
|
@@ -2292,20 +2298,32 @@
|
|
|
2292
2298
|
"text": "L/h",
|
|
2293
2299
|
"description": "The Unified Code for Units of Measure (UCUM) representation of liters per hour."
|
|
2294
2300
|
},
|
|
2295
|
-
"pH": {
|
|
2296
|
-
"text": "pH",
|
|
2301
|
+
"[pH]": {
|
|
2302
|
+
"text": "[pH]",
|
|
2297
2303
|
"description": "The Unified Code for Units of Measure (UCUM) representation of pH units.",
|
|
2298
2304
|
"aliases": [
|
|
2299
|
-
"
|
|
2305
|
+
"pH"
|
|
2300
2306
|
]
|
|
2301
2307
|
},
|
|
2302
2308
|
"kW/m2/d": {
|
|
2303
2309
|
"text": "kW/m2/d",
|
|
2304
2310
|
"description": "The Unified Code for Units of Measure (UCUM) representation of kilowatts per square meter per day."
|
|
2305
2311
|
},
|
|
2306
|
-
"NTU": {
|
|
2307
|
-
"text": "NTU",
|
|
2308
|
-
"description": "The Unified Code for Units of Measure (UCUM) representation of Nephelometric Turbidity Units."
|
|
2312
|
+
"[NTU]": {
|
|
2313
|
+
"text": "[NTU]",
|
|
2314
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of Nephelometric Turbidity Units.",
|
|
2315
|
+
"title": "Nephelometric Turbidity Units",
|
|
2316
|
+
"aliases": [
|
|
2317
|
+
"NTU"
|
|
2318
|
+
]
|
|
2319
|
+
},
|
|
2320
|
+
"[FNU]": {
|
|
2321
|
+
"text": "[FNU]",
|
|
2322
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of Formazin Nephelometric Units.",
|
|
2323
|
+
"title": "Formazin Nephelometric Units",
|
|
2324
|
+
"aliases": [
|
|
2325
|
+
"FNU"
|
|
2326
|
+
]
|
|
2309
2327
|
},
|
|
2310
2328
|
"m3/min": {
|
|
2311
2329
|
"text": "m3/min",
|
|
@@ -2314,6 +2332,233 @@
|
|
|
2314
2332
|
"km/h": {
|
|
2315
2333
|
"text": "km/h",
|
|
2316
2334
|
"description": "The Unified Code for Units of Measure (UCUM) representation of kilometers per hour."
|
|
2335
|
+
},
|
|
2336
|
+
"[lb_av]": {
|
|
2337
|
+
"text": "[lb_av]",
|
|
2338
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of pound (avoirdupois).",
|
|
2339
|
+
"title": "pounds (avoirdupois)",
|
|
2340
|
+
"aliases": [
|
|
2341
|
+
"pound",
|
|
2342
|
+
"lb"
|
|
2343
|
+
]
|
|
2344
|
+
},
|
|
2345
|
+
"kg/kg": {
|
|
2346
|
+
"text": "kg/kg",
|
|
2347
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of kilogram per kilogram.",
|
|
2348
|
+
"aliases": [
|
|
2349
|
+
"kilogram per kilogram"
|
|
2350
|
+
]
|
|
2351
|
+
},
|
|
2352
|
+
"ug/m3": {
|
|
2353
|
+
"text": "ug/m3",
|
|
2354
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of micrograms per cubic meter.",
|
|
2355
|
+
"aliases": [
|
|
2356
|
+
"μg/m3",
|
|
2357
|
+
"micrograms per cubic meter"
|
|
2358
|
+
]
|
|
2359
|
+
},
|
|
2360
|
+
"meq/L": {
|
|
2361
|
+
"text": "meq/L",
|
|
2362
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of milliequivalents per liter.",
|
|
2363
|
+
"aliases": [
|
|
2364
|
+
"milliequivalents per liter"
|
|
2365
|
+
]
|
|
2366
|
+
},
|
|
2367
|
+
"lm/m2": {
|
|
2368
|
+
"text": "lm/m2",
|
|
2369
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of lumens per square meter.",
|
|
2370
|
+
"aliases": [
|
|
2371
|
+
"lumens per square meter"
|
|
2372
|
+
]
|
|
2373
|
+
},
|
|
2374
|
+
"mg": {
|
|
2375
|
+
"text": "mg",
|
|
2376
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of milligram.",
|
|
2377
|
+
"aliases": [
|
|
2378
|
+
"milligram",
|
|
2379
|
+
"milligrams"
|
|
2380
|
+
]
|
|
2381
|
+
},
|
|
2382
|
+
"umol/L/h": {
|
|
2383
|
+
"text": "umol/L/h",
|
|
2384
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of micromoles per liter per hour.",
|
|
2385
|
+
"comments": [
|
|
2386
|
+
"For example, micromoles of oxygen created by photosynthesis per liter of water per hour."
|
|
2387
|
+
],
|
|
2388
|
+
"aliases": [
|
|
2389
|
+
"micromoles per liter per hour"
|
|
2390
|
+
]
|
|
2391
|
+
},
|
|
2392
|
+
"g/cm3": {
|
|
2393
|
+
"text": "g/cm3",
|
|
2394
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of grams per cubic centimeter.",
|
|
2395
|
+
"aliases": [
|
|
2396
|
+
"grams per cubic centimeter"
|
|
2397
|
+
]
|
|
2398
|
+
},
|
|
2399
|
+
"g/L": {
|
|
2400
|
+
"text": "g/L",
|
|
2401
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of grams per liter.",
|
|
2402
|
+
"aliases": [
|
|
2403
|
+
"grams per liter"
|
|
2404
|
+
]
|
|
2405
|
+
},
|
|
2406
|
+
"wk": {
|
|
2407
|
+
"text": "wk",
|
|
2408
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of week.",
|
|
2409
|
+
"aliases": [
|
|
2410
|
+
"week",
|
|
2411
|
+
"weeks"
|
|
2412
|
+
]
|
|
2413
|
+
},
|
|
2414
|
+
"[g]": {
|
|
2415
|
+
"text": "[g]",
|
|
2416
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of standard gravity.",
|
|
2417
|
+
"title": "standard gravity",
|
|
2418
|
+
"aliases": [
|
|
2419
|
+
"standard gravity",
|
|
2420
|
+
"g-force"
|
|
2421
|
+
]
|
|
2422
|
+
},
|
|
2423
|
+
"m/s2": {
|
|
2424
|
+
"text": "m/s2",
|
|
2425
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of meters per second squared.",
|
|
2426
|
+
"aliases": [
|
|
2427
|
+
"meters per second squared"
|
|
2428
|
+
]
|
|
2429
|
+
},
|
|
2430
|
+
"mol/g": {
|
|
2431
|
+
"text": "mol/g",
|
|
2432
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of moles per gram.",
|
|
2433
|
+
"aliases": [
|
|
2434
|
+
"moles per gram"
|
|
2435
|
+
]
|
|
2436
|
+
},
|
|
2437
|
+
"g/m2/d": {
|
|
2438
|
+
"text": "g/m2/d",
|
|
2439
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of grams per square meter per day.",
|
|
2440
|
+
"aliases": [
|
|
2441
|
+
"grams per square meter per day"
|
|
2442
|
+
]
|
|
2443
|
+
},
|
|
2444
|
+
"Gy": {
|
|
2445
|
+
"text": "Gy",
|
|
2446
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of gray (absorbed dose).",
|
|
2447
|
+
"aliases": [
|
|
2448
|
+
"gray"
|
|
2449
|
+
]
|
|
2450
|
+
},
|
|
2451
|
+
"RAD": {
|
|
2452
|
+
"text": "RAD",
|
|
2453
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of rad (radiation absorbed dose).",
|
|
2454
|
+
"title": "rad (radiation absorbed dose)",
|
|
2455
|
+
"aliases": [
|
|
2456
|
+
"radiation absorbed dose"
|
|
2457
|
+
]
|
|
2458
|
+
},
|
|
2459
|
+
"[sft_i]": {
|
|
2460
|
+
"text": "[sft_i]",
|
|
2461
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of square feet.",
|
|
2462
|
+
"title": "square feet",
|
|
2463
|
+
"aliases": [
|
|
2464
|
+
"square feet",
|
|
2465
|
+
"sq ft"
|
|
2466
|
+
]
|
|
2467
|
+
},
|
|
2468
|
+
"[cft_i]": {
|
|
2469
|
+
"text": "[cft_i]",
|
|
2470
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of cubic feet.",
|
|
2471
|
+
"title": "cubic feet",
|
|
2472
|
+
"aliases": [
|
|
2473
|
+
"cubic feet",
|
|
2474
|
+
"cu ft"
|
|
2475
|
+
]
|
|
2476
|
+
},
|
|
2477
|
+
"m3": {
|
|
2478
|
+
"text": "m3",
|
|
2479
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of cubic meter.",
|
|
2480
|
+
"aliases": [
|
|
2481
|
+
"cubic meter",
|
|
2482
|
+
"cubic meters"
|
|
2483
|
+
]
|
|
2484
|
+
},
|
|
2485
|
+
"ug": {
|
|
2486
|
+
"text": "ug",
|
|
2487
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of microgram.",
|
|
2488
|
+
"aliases": [
|
|
2489
|
+
"μg",
|
|
2490
|
+
"microgram",
|
|
2491
|
+
"micrograms"
|
|
2492
|
+
]
|
|
2493
|
+
},
|
|
2494
|
+
"mm/a": {
|
|
2495
|
+
"text": "mm/a",
|
|
2496
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of millimeters per year.",
|
|
2497
|
+
"title": "millimeters per year",
|
|
2498
|
+
"aliases": [
|
|
2499
|
+
"millimeters per year"
|
|
2500
|
+
]
|
|
2501
|
+
},
|
|
2502
|
+
"cm2": {
|
|
2503
|
+
"text": "cm2",
|
|
2504
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of square centimeter.",
|
|
2505
|
+
"aliases": [
|
|
2506
|
+
"square centimeter",
|
|
2507
|
+
"square centimeters"
|
|
2508
|
+
]
|
|
2509
|
+
},
|
|
2510
|
+
"erg/cm2/s": {
|
|
2511
|
+
"text": "erg/cm2/s",
|
|
2512
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of ergs per square centimeter per second.",
|
|
2513
|
+
"aliases": [
|
|
2514
|
+
"ergs per square centimeter per second"
|
|
2515
|
+
]
|
|
2516
|
+
},
|
|
2517
|
+
"g/m2": {
|
|
2518
|
+
"text": "g/m2",
|
|
2519
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of grams per square meter.",
|
|
2520
|
+
"aliases": [
|
|
2521
|
+
"grams per square meter"
|
|
2522
|
+
]
|
|
2523
|
+
},
|
|
2524
|
+
"L/s": {
|
|
2525
|
+
"text": "L/s",
|
|
2526
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of liters per second.",
|
|
2527
|
+
"aliases": [
|
|
2528
|
+
"liters per second"
|
|
2529
|
+
]
|
|
2530
|
+
},
|
|
2531
|
+
"cm3/cm3": {
|
|
2532
|
+
"text": "cm3/cm3",
|
|
2533
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of cubic centimeters per cubic centimeter.",
|
|
2534
|
+
"aliases": [
|
|
2535
|
+
"cubic centimeters per cubic centimeter"
|
|
2536
|
+
]
|
|
2537
|
+
},
|
|
2538
|
+
"[kn_i]": {
|
|
2539
|
+
"text": "[kn_i]",
|
|
2540
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of knot (nautical miles per hour).",
|
|
2541
|
+
"title": "knots",
|
|
2542
|
+
"aliases": [
|
|
2543
|
+
"knot",
|
|
2544
|
+
"knots"
|
|
2545
|
+
]
|
|
2546
|
+
},
|
|
2547
|
+
"m3/s": {
|
|
2548
|
+
"text": "m3/s",
|
|
2549
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of cubic meters per second.",
|
|
2550
|
+
"aliases": [
|
|
2551
|
+
"cubic meters per second"
|
|
2552
|
+
]
|
|
2553
|
+
},
|
|
2554
|
+
"[in_i]": {
|
|
2555
|
+
"text": "[in_i]",
|
|
2556
|
+
"description": "The Unified Code for Units of Measure (UCUM) representation of inch.",
|
|
2557
|
+
"title": "inches",
|
|
2558
|
+
"aliases": [
|
|
2559
|
+
"inch",
|
|
2560
|
+
"inches"
|
|
2561
|
+
]
|
|
2317
2562
|
}
|
|
2318
2563
|
}
|
|
2319
2564
|
},
|
|
@@ -7257,6 +7502,106 @@
|
|
|
7257
7502
|
}
|
|
7258
7503
|
}
|
|
7259
7504
|
},
|
|
7505
|
+
"ProtocolForEnum": {
|
|
7506
|
+
"name": "ProtocolForEnum",
|
|
7507
|
+
"description": "The permitted values for describing the type of planned process that a protocol describes.",
|
|
7508
|
+
"comments": [
|
|
7509
|
+
"These are the non-abstract class descendants of PlannedProcess."
|
|
7510
|
+
],
|
|
7511
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
7512
|
+
"permissible_values": {
|
|
7513
|
+
"AnnotatingWorkflow": {
|
|
7514
|
+
"text": "AnnotatingWorkflow"
|
|
7515
|
+
},
|
|
7516
|
+
"ChemicalConversionProcess": {
|
|
7517
|
+
"text": "ChemicalConversionProcess"
|
|
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|
+
},
|
|
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|
+
"ChromatographicSeparationProcess": {
|
|
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|
+
"text": "ChromatographicSeparationProcess"
|
|
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|
+
},
|
|
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|
+
"CollectingBiosamplesFromSite": {
|
|
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|
+
"text": "CollectingBiosamplesFromSite"
|
|
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|
+
},
|
|
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|
+
"DataEmitterProcess": {
|
|
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|
+
"text": "DataEmitterProcess"
|
|
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|
+
},
|
|
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|
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"DataGeneration": {
|
|
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|
+
"text": "DataGeneration"
|
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|
+
},
|
|
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|
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"DissolvingProcess": {
|
|
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|
+
"text": "DissolvingProcess"
|
|
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|
+
},
|
|
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|
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"Extraction": {
|
|
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|
+
"text": "Extraction"
|
|
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|
+
},
|
|
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|
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"FiltrationProcess": {
|
|
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|
+
"text": "FiltrationProcess"
|
|
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+
},
|
|
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|
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"LibraryPreparation": {
|
|
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|
+
"text": "LibraryPreparation"
|
|
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|
+
},
|
|
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|
+
"MagsAnalysis": {
|
|
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|
+
"text": "MagsAnalysis"
|
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|
+
},
|
|
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|
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"MassSpectrometry": {
|
|
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|
+
"text": "MassSpectrometry"
|
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|
+
},
|
|
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|
+
"MaterialProcessing": {
|
|
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+
"text": "MaterialProcessing"
|
|
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|
+
},
|
|
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|
+
"MetabolomicsAnalysis": {
|
|
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|
+
"text": "MetabolomicsAnalysis"
|
|
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|
+
},
|
|
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|
+
"MetagenomeAnnotation": {
|
|
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|
+
"text": "MetagenomeAnnotation"
|
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|
+
},
|
|
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|
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"MetagenomeAssembly": {
|
|
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|
+
"text": "MetagenomeAssembly"
|
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|
+
},
|
|
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|
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"MetaproteomicsAnalysis": {
|
|
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|
+
"text": "MetaproteomicsAnalysis"
|
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|
+
},
|
|
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|
+
"MetatranscriptomeAnnotation": {
|
|
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|
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"text": "MetatranscriptomeAnnotation"
|
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|
+
},
|
|
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|
+
"MetatranscriptomeAssembly": {
|
|
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|
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"text": "MetatranscriptomeAssembly"
|
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|
+
},
|
|
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|
+
"MetatranscriptomeExpressionAnalysis": {
|
|
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|
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"text": "MetatranscriptomeExpressionAnalysis"
|
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|
+
},
|
|
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|
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"MixingProcess": {
|
|
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|
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"text": "MixingProcess"
|
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|
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},
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|
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|
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"NomAnalysis": {
|
|
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|
+
"text": "NomAnalysis"
|
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|
+
},
|
|
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|
+
"NucleotideSequencing": {
|
|
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|
+
"text": "NucleotideSequencing"
|
|
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|
+
},
|
|
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|
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"PlannedProcess": {
|
|
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|
+
"text": "PlannedProcess"
|
|
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|
+
},
|
|
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|
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"Pooling": {
|
|
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|
+
"text": "Pooling"
|
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|
+
},
|
|
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|
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"ReadBasedTaxonomyAnalysis": {
|
|
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|
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"text": "ReadBasedTaxonomyAnalysis"
|
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|
+
},
|
|
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|
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"ReadQcAnalysis": {
|
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"text": "ReadQcAnalysis"
|
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+
},
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|
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"StorageProcess": {
|
|
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|
+
"text": "StorageProcess"
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|
+
},
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|
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|
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"SubSamplingProcess": {
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|
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|
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"text": "SubSamplingProcess"
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+
},
|
|
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|
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"WorkflowExecution": {
|
|
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|
+
"text": "WorkflowExecution"
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|
+
}
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}
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|
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},
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|
"SampleTypeEnum": {
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|
"name": "SampleTypeEnum",
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
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@@ -7419,6 +7764,12 @@
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|
"slots": {
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|
"biomaterial_purity": {
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|
"name": "biomaterial_purity",
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"annotations": {
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"units_alignment_excuse": {
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"tag": "units_alignment_excuse",
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"value": "pending_analysis"
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}
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},
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"from_schema": "https://w3id.org/nmdc/nmdc",
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"range": "QuantityValue"
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},
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@@ -7672,6 +8023,12 @@
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},
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|
"input_mass": {
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|
"name": "input_mass",
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"annotations": {
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"storage_units": {
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"tag": "storage_units",
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"value": "g"
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|
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}
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|
+
},
|
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|
"description": "Total mass of sample used in activity.",
|
|
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|
"title": "sample mass used",
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -7913,6 +8270,12 @@
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},
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|
"container_size": {
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|
"name": "container_size",
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|
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"annotations": {
|
|
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|
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"units_alignment_excuse": {
|
|
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|
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"tag": "units_alignment_excuse",
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|
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"value": "pending_analysis"
|
|
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|
+
}
|
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|
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},
|
|
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|
"description": "The volume of the container an analyte is stored in or an activity takes place in",
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
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"contributors": [
|
|
@@ -7932,6 +8295,12 @@
|
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|
},
|
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|
"filter_pore_size": {
|
|
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|
"name": "filter_pore_size",
|
|
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|
+
"annotations": {
|
|
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|
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"units_alignment_excuse": {
|
|
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|
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"tag": "units_alignment_excuse",
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|
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"value": "pending_analysis"
|
|
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|
+
}
|
|
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|
+
},
|
|
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|
"description": "A quantitative or qualitative measurement of the physical dimensions of the pores in a material.",
|
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
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|
"range": "QuantityValue"
|
|
@@ -7964,6 +8333,12 @@
|
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|
},
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|
"value": {
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|
"name": "value",
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|
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"annotations": {
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|
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"units_alignment_excuse": {
|
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|
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"tag": "units_alignment_excuse",
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|
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"value": "pending_analysis"
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|
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}
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|
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},
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
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|
"range": "QuantityValue"
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|
},
|
|
@@ -7998,6 +8373,12 @@
|
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|
},
|
|
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|
"input_volume": {
|
|
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8375
|
"name": "input_volume",
|
|
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|
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"annotations": {
|
|
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|
+
"units_alignment_excuse": {
|
|
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|
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"tag": "units_alignment_excuse",
|
|
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|
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"value": "pending_analysis"
|
|
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|
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}
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|
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|
+
},
|
|
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|
"description": "The volume of the input sample.",
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
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|
"range": "QuantityValue"
|
|
@@ -8038,6 +8419,12 @@
|
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|
},
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|
"substances_volume": {
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|
"name": "substances_volume",
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|
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|
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"annotations": {
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|
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|
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"units_alignment_excuse": {
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|
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|
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"tag": "units_alignment_excuse",
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|
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"value": "pending_analysis"
|
|
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|
+
}
|
|
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|
+
},
|
|
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|
"description": "The volume of the combined substances that was included in a ChemicalConversionProcess.",
|
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
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|
"range": "QuantityValue"
|
|
@@ -8063,6 +8450,12 @@
|
|
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|
},
|
|
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|
"bulk_elect_conductivity": {
|
|
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|
"name": "bulk_elect_conductivity",
|
|
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|
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"annotations": {
|
|
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|
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"units_alignment_excuse": {
|
|
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|
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"tag": "units_alignment_excuse",
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|
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"value": "pending_analysis"
|
|
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|
+
}
|
|
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|
+
},
|
|
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|
"description": "Electrical conductivity is a measure of the ability to carry electric current, which is mostly dictated by the chemistry of and amount of water.",
|
|
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8460
|
"title": "bulk electrical conductivity",
|
|
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|
"comments": [
|
|
@@ -8079,6 +8472,12 @@
|
|
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|
},
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|
"subsurface_depth": {
|
|
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|
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|
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|
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"annotations": {
|
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|
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"storage_units": {
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|
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"tag": "storage_units",
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|
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"value": "m"
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|
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}
|
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|
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},
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
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},
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|
@@ -8108,6 +8507,10 @@
|
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|
"occurrence": {
|
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|
"tag": "occurrence",
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|
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|
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|
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},
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|
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"storage_units": {
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|
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|
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|
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"value": "[ppm]|mg/kg|mg/L"
|
|
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|
}
|
|
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|
},
|
|
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|
"description": "Concentration of zinc in the sample",
|
|
@@ -8137,6 +8540,10 @@
|
|
|
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|
"occurrence": {
|
|
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|
"tag": "occurrence",
|
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|
"value": "1"
|
|
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|
+
},
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|
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"storage_units": {
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|
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|
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"value": "[ppm]|mg/kg|mg/L"
|
|
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|
}
|
|
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|
},
|
|
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|
"description": "Concentration of manganese in the sample",
|
|
@@ -8166,6 +8573,10 @@
|
|
|
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|
"occurrence": {
|
|
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|
"tag": "occurrence",
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|
"value": "1"
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|
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},
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|
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"storage_units": {
|
|
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|
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"tag": "storage_units",
|
|
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|
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"value": "[ppm]|mg/kg|mg/L"
|
|
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|
}
|
|
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|
},
|
|
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|
"description": "Concentration of ammonium nitrogen in the sample",
|
|
@@ -8198,6 +8609,10 @@
|
|
|
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8609
|
"occurrence": {
|
|
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|
"tag": "occurrence",
|
|
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|
"value": "1"
|
|
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|
+
},
|
|
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|
+
"storage_units": {
|
|
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|
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"tag": "storage_units",
|
|
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|
+
"value": "[ppm]|mg/kg|mg/L"
|
|
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|
}
|
|
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|
},
|
|
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8618
|
"description": "Concentration of nitrate nitrogen in the sample",
|
|
@@ -8233,6 +8648,10 @@
|
|
|
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|
"occurrence": {
|
|
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|
"tag": "occurrence",
|
|
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|
"value": "1"
|
|
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|
+
},
|
|
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|
+
"storage_units": {
|
|
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|
+
"tag": "storage_units",
|
|
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|
+
"value": "[ppm]|mg/kg|mg/L"
|
|
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8655
|
}
|
|
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|
},
|
|
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8657
|
"description": "Concentration of nitrite nitrogen in the sample",
|
|
@@ -8265,6 +8684,10 @@
|
|
|
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|
"occurrence": {
|
|
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|
"tag": "occurrence",
|
|
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|
"value": "1"
|
|
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|
+
},
|
|
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|
+
"storage_units": {
|
|
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|
+
"tag": "storage_units",
|
|
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|
+
"value": "[ppm]"
|
|
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|
}
|
|
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8692
|
},
|
|
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8693
|
"description": "lime buffer capacity, determined after 30 minute incubation",
|
|
@@ -8274,7 +8697,7 @@
|
|
|
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|
],
|
|
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|
"examples": [
|
|
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|
{
|
|
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|
-
"value": "543
|
|
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|
+
"value": "543 [ppm]"
|
|
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|
}
|
|
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|
],
|
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -8302,6 +8725,10 @@
|
|
|
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|
"occurrence": {
|
|
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|
"tag": "occurrence",
|
|
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|
"value": "1"
|
|
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|
+
},
|
|
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|
+
"storage_units": {
|
|
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|
+
"tag": "storage_units",
|
|
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|
+
"value": "[ppm]"
|
|
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|
}
|
|
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|
},
|
|
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8734
|
"description": "lime buffer capacity, determined at equilibrium after 5 day incubation",
|
|
@@ -8311,7 +8738,7 @@
|
|
|
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8738
|
],
|
|
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|
"examples": [
|
|
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|
{
|
|
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|
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"value": "1575
|
|
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|
+
"value": "1575 [ppm]"
|
|
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|
}
|
|
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|
],
|
|
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -8363,6 +8790,12 @@
|
|
|
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|
},
|
|
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|
"mass": {
|
|
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|
"name": "mass",
|
|
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|
+
"annotations": {
|
|
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|
+
"storage_units": {
|
|
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|
+
"tag": "storage_units",
|
|
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|
+
"value": "g"
|
|
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|
+
}
|
|
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|
+
},
|
|
8366
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|
"description": "A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter.",
|
|
8367
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|
"title": "mass",
|
|
8368
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -8387,24 +8820,48 @@
|
|
|
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|
},
|
|
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|
"concentration": {
|
|
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|
"name": "concentration",
|
|
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|
+
"annotations": {
|
|
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|
+
"units_alignment_excuse": {
|
|
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|
+
"tag": "units_alignment_excuse",
|
|
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|
+
"value": "pending_analysis"
|
|
8827
|
+
}
|
|
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|
+
},
|
|
8390
8829
|
"description": "The concentration of a substance used in a process",
|
|
8391
8830
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
8392
8831
|
"range": "QuantityValue"
|
|
8393
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|
},
|
|
8394
8833
|
"source_concentration": {
|
|
8395
8834
|
"name": "source_concentration",
|
|
8835
|
+
"annotations": {
|
|
8836
|
+
"storage_units": {
|
|
8837
|
+
"tag": "storage_units",
|
|
8838
|
+
"value": "%|mmol/L"
|
|
8839
|
+
}
|
|
8840
|
+
},
|
|
8396
8841
|
"description": "When solutions A (containing substance X) and B are combined together, this slot captures the concentration of X in solution A",
|
|
8397
8842
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
8398
8843
|
"is_a": "concentration"
|
|
8399
8844
|
},
|
|
8400
8845
|
"final_concentration": {
|
|
8401
8846
|
"name": "final_concentration",
|
|
8847
|
+
"annotations": {
|
|
8848
|
+
"storage_units": {
|
|
8849
|
+
"tag": "storage_units",
|
|
8850
|
+
"value": "%|mmol/L|umol/L|mg/L|g/L"
|
|
8851
|
+
}
|
|
8852
|
+
},
|
|
8402
8853
|
"description": "When solutions A (containing substance X) and B are combined together, this slot captures the concentration of X in the combination",
|
|
8403
8854
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
8404
8855
|
"is_a": "concentration"
|
|
8405
8856
|
},
|
|
8406
8857
|
"duration": {
|
|
8407
8858
|
"name": "duration",
|
|
8859
|
+
"annotations": {
|
|
8860
|
+
"storage_units": {
|
|
8861
|
+
"tag": "storage_units",
|
|
8862
|
+
"value": "h|min"
|
|
8863
|
+
}
|
|
8864
|
+
},
|
|
8408
8865
|
"description": "The elapsed time of an activity.",
|
|
8409
8866
|
"examples": [
|
|
8410
8867
|
{
|
|
@@ -8416,6 +8873,12 @@
|
|
|
8416
8873
|
},
|
|
8417
8874
|
"temperature": {
|
|
8418
8875
|
"name": "temperature",
|
|
8876
|
+
"annotations": {
|
|
8877
|
+
"storage_units": {
|
|
8878
|
+
"tag": "storage_units",
|
|
8879
|
+
"value": "Cel"
|
|
8880
|
+
}
|
|
8881
|
+
},
|
|
8419
8882
|
"description": "The value of a temperature measurement or temperature used in a process.",
|
|
8420
8883
|
"notes": [
|
|
8421
8884
|
"Not to be confused with the MIXS:0000113"
|
|
@@ -8657,6 +9120,12 @@
|
|
|
8657
9120
|
},
|
|
8658
9121
|
"volume": {
|
|
8659
9122
|
"name": "volume",
|
|
9123
|
+
"annotations": {
|
|
9124
|
+
"storage_units": {
|
|
9125
|
+
"tag": "storage_units",
|
|
9126
|
+
"value": "mL|uL"
|
|
9127
|
+
}
|
|
9128
|
+
},
|
|
8660
9129
|
"description": "The volume of a substance.",
|
|
8661
9130
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
8662
9131
|
"contributors": [
|
|
@@ -8839,8 +9308,7 @@
|
|
|
8839
9308
|
"qud:unit",
|
|
8840
9309
|
"schema:unitCode"
|
|
8841
9310
|
],
|
|
8842
|
-
"range": "
|
|
8843
|
-
"required": true
|
|
9311
|
+
"range": "string"
|
|
8844
9312
|
},
|
|
8845
9313
|
"type": {
|
|
8846
9314
|
"name": "type",
|
|
@@ -8966,6 +9434,53 @@
|
|
|
8966
9434
|
"multivalued": true,
|
|
8967
9435
|
"pattern": "^[Hh][Tt][Tt][Pp][Ss]?:\\/\\/(?!.*[Dd][Oo][Ii]\\.[Oo][Rr][Gg]).*$"
|
|
8968
9436
|
},
|
|
9437
|
+
"has_attribute_label": {
|
|
9438
|
+
"name": "has_attribute_label",
|
|
9439
|
+
"description": "Human-readable label for the property (e.g., MIxS label, ENVO term label).",
|
|
9440
|
+
"comments": [
|
|
9441
|
+
"This provides a human-friendly name for the asserted property. For example, \"bicarbonate ion concentration\" or \"total phosphorus\". The label helps with readability and data discovery."
|
|
9442
|
+
],
|
|
9443
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
9444
|
+
"range": "string"
|
|
9445
|
+
},
|
|
9446
|
+
"has_attribute_id": {
|
|
9447
|
+
"name": "has_attribute_id",
|
|
9448
|
+
"description": "CURIE or IRI for the property (MIxS slot, NMDC slot, ENVO/OBI term, etc.).",
|
|
9449
|
+
"comments": [
|
|
9450
|
+
"This provides a resolvable identifier for the property being asserted. Examples include MIXS:0000117 for total phosphorus, or ENVO:01001357 for bicarbonate ion concentration.",
|
|
9451
|
+
"Prefer using standard ontology terms (ENVO, PATO, OBI, etc.) or MIxS identifiers when available to enhance interoperability."
|
|
9452
|
+
],
|
|
9453
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
9454
|
+
"range": "uriorcurie"
|
|
9455
|
+
},
|
|
9456
|
+
"has_quantity_kind_id": {
|
|
9457
|
+
"name": "has_quantity_kind_id",
|
|
9458
|
+
"description": "Optional CURIE or IRI for the physical quantity kind (e.g., qudt:QuantityKind).",
|
|
9459
|
+
"comments": [
|
|
9460
|
+
"This slot enables precise semantic description of what physical quantity is being measured, independent of the specific units used. For example, qudt:MassConcentration or qudt:Temperature.",
|
|
9461
|
+
"Using quantity kind identifiers from QUDT or similar vocabularies improves data integration and enables automated unit conversion."
|
|
9462
|
+
],
|
|
9463
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
9464
|
+
"range": "uriorcurie"
|
|
9465
|
+
},
|
|
9466
|
+
"has_value_term_id": {
|
|
9467
|
+
"name": "has_value_term_id",
|
|
9468
|
+
"description": "CURIE or IRI for categorical values (ENVO, PATO, METPO, etc.).",
|
|
9469
|
+
"comments": [
|
|
9470
|
+
"Use this slot when the value of the property is a controlled vocabulary term rather than a numeric or free-text value. For example, ENVO:00002297 for \"desert ecosystem\" or PATO:0001199 for \"dry\"."
|
|
9471
|
+
],
|
|
9472
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
9473
|
+
"range": "uriorcurie"
|
|
9474
|
+
},
|
|
9475
|
+
"has_datetime_value": {
|
|
9476
|
+
"name": "has_datetime_value",
|
|
9477
|
+
"description": "Date-time value for the property in ISO-8601 format.",
|
|
9478
|
+
"comments": [
|
|
9479
|
+
"Use this slot for temporal properties. The value should follow ISO-8601 format (e.g., \"2025-06-12T14:30:00Z\")."
|
|
9480
|
+
],
|
|
9481
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
9482
|
+
"range": "string"
|
|
9483
|
+
},
|
|
8969
9484
|
"processing_institution_workflow_metadata": {
|
|
8970
9485
|
"name": "processing_institution_workflow_metadata",
|
|
8971
9486
|
"description": "Information about how workflow results were generated when the processing is done by an external organziation (e.g., JGI) such as software tool name and version or pipeline name and version.",
|
|
@@ -10071,13 +10586,17 @@
|
|
|
10071
10586
|
"occurrence": {
|
|
10072
10587
|
"tag": "occurrence",
|
|
10073
10588
|
"value": "1"
|
|
10589
|
+
},
|
|
10590
|
+
"storage_units": {
|
|
10591
|
+
"tag": "storage_units",
|
|
10592
|
+
"value": "[lb_av]|g/g|kg|kg/kg"
|
|
10074
10593
|
}
|
|
10075
10594
|
},
|
|
10076
10595
|
"description": "Actual mass of water vapor - mh20 - present in the air water vapor mixture",
|
|
10077
10596
|
"title": "absolute air humidity",
|
|
10078
10597
|
"examples": [
|
|
10079
10598
|
{
|
|
10080
|
-
"value": "9
|
|
10599
|
+
"value": "9 g/g"
|
|
10081
10600
|
}
|
|
10082
10601
|
],
|
|
10083
10602
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10315,13 +10834,17 @@
|
|
|
10315
10834
|
"occurrence": {
|
|
10316
10835
|
"tag": "occurrence",
|
|
10317
10836
|
"value": "1"
|
|
10837
|
+
},
|
|
10838
|
+
"storage_units": {
|
|
10839
|
+
"tag": "storage_units",
|
|
10840
|
+
"value": "Cel"
|
|
10318
10841
|
}
|
|
10319
10842
|
},
|
|
10320
10843
|
"description": "Temperature of the air at the time of sampling",
|
|
10321
10844
|
"title": "air temperature",
|
|
10322
10845
|
"examples": [
|
|
10323
10846
|
{
|
|
10324
|
-
"value": "20
|
|
10847
|
+
"value": "20 Cel"
|
|
10325
10848
|
}
|
|
10326
10849
|
],
|
|
10327
10850
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10381,6 +10904,10 @@
|
|
|
10381
10904
|
"occurrence": {
|
|
10382
10905
|
"tag": "occurrence",
|
|
10383
10906
|
"value": "1"
|
|
10907
|
+
},
|
|
10908
|
+
"storage_units": {
|
|
10909
|
+
"tag": "storage_units",
|
|
10910
|
+
"value": "%"
|
|
10384
10911
|
}
|
|
10385
10912
|
},
|
|
10386
10913
|
"description": "Aluminum saturation (esp. For tropical soils)",
|
|
@@ -10442,13 +10969,17 @@
|
|
|
10442
10969
|
"occurrence": {
|
|
10443
10970
|
"tag": "occurrence",
|
|
10444
10971
|
"value": "1"
|
|
10972
|
+
},
|
|
10973
|
+
"storage_units": {
|
|
10974
|
+
"tag": "storage_units",
|
|
10975
|
+
"value": "meq/L|mg/L"
|
|
10445
10976
|
}
|
|
10446
10977
|
},
|
|
10447
10978
|
"description": "Alkalinity, the ability of a solution to neutralize acids to the equivalence point of carbonate or bicarbonate",
|
|
10448
10979
|
"title": "alkalinity",
|
|
10449
10980
|
"examples": [
|
|
10450
10981
|
{
|
|
10451
|
-
"value": "50
|
|
10982
|
+
"value": "50 mg/L"
|
|
10452
10983
|
}
|
|
10453
10984
|
],
|
|
10454
10985
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10503,13 +11034,17 @@
|
|
|
10503
11034
|
"occurrence": {
|
|
10504
11035
|
"tag": "occurrence",
|
|
10505
11036
|
"value": "1"
|
|
11037
|
+
},
|
|
11038
|
+
"storage_units": {
|
|
11039
|
+
"tag": "storage_units",
|
|
11040
|
+
"value": "mol/L"
|
|
10506
11041
|
}
|
|
10507
11042
|
},
|
|
10508
11043
|
"description": "Concentration of alkyl diethers",
|
|
10509
11044
|
"title": "alkyl diethers",
|
|
10510
11045
|
"examples": [
|
|
10511
11046
|
{
|
|
10512
|
-
"value": "0.005
|
|
11047
|
+
"value": "0.005 mol/L"
|
|
10513
11048
|
}
|
|
10514
11049
|
],
|
|
10515
11050
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10527,13 +11062,17 @@
|
|
|
10527
11062
|
"expected_value": {
|
|
10528
11063
|
"tag": "expected_value",
|
|
10529
11064
|
"value": "measurement value"
|
|
11065
|
+
},
|
|
11066
|
+
"storage_units": {
|
|
11067
|
+
"tag": "storage_units",
|
|
11068
|
+
"value": "m"
|
|
10530
11069
|
}
|
|
10531
11070
|
},
|
|
10532
11071
|
"description": "Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air",
|
|
10533
11072
|
"title": "altitude",
|
|
10534
11073
|
"examples": [
|
|
10535
11074
|
{
|
|
10536
|
-
"value": "100
|
|
11075
|
+
"value": "100 m"
|
|
10537
11076
|
}
|
|
10538
11077
|
],
|
|
10539
11078
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10559,13 +11098,17 @@
|
|
|
10559
11098
|
"occurrence": {
|
|
10560
11099
|
"tag": "occurrence",
|
|
10561
11100
|
"value": "1"
|
|
11101
|
+
},
|
|
11102
|
+
"storage_units": {
|
|
11103
|
+
"tag": "storage_units",
|
|
11104
|
+
"value": "mol/L/h"
|
|
10562
11105
|
}
|
|
10563
11106
|
},
|
|
10564
11107
|
"description": "Measurement of aminopeptidase activity",
|
|
10565
11108
|
"title": "aminopeptidase activity",
|
|
10566
11109
|
"examples": [
|
|
10567
11110
|
{
|
|
10568
|
-
"value": "0.269
|
|
11111
|
+
"value": "0.269 mol/L/h"
|
|
10569
11112
|
}
|
|
10570
11113
|
],
|
|
10571
11114
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10591,13 +11134,17 @@
|
|
|
10591
11134
|
"occurrence": {
|
|
10592
11135
|
"tag": "occurrence",
|
|
10593
11136
|
"value": "1"
|
|
11137
|
+
},
|
|
11138
|
+
"storage_units": {
|
|
11139
|
+
"tag": "storage_units",
|
|
11140
|
+
"value": "[ppm]|mg/L|umol/L"
|
|
10594
11141
|
}
|
|
10595
11142
|
},
|
|
10596
11143
|
"description": "Concentration of ammonium in the sample",
|
|
10597
11144
|
"title": "ammonium",
|
|
10598
11145
|
"examples": [
|
|
10599
11146
|
{
|
|
10600
|
-
"value": "1.5
|
|
11147
|
+
"value": "1.5 mg/L"
|
|
10601
11148
|
}
|
|
10602
11149
|
],
|
|
10603
11150
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10623,6 +11170,10 @@
|
|
|
10623
11170
|
"occurrence": {
|
|
10624
11171
|
"tag": "occurrence",
|
|
10625
11172
|
"value": "1"
|
|
11173
|
+
},
|
|
11174
|
+
"storage_units": {
|
|
11175
|
+
"tag": "storage_units",
|
|
11176
|
+
"value": "lm/m2|lx"
|
|
10626
11177
|
}
|
|
10627
11178
|
},
|
|
10628
11179
|
"description": "The unit of illuminance and luminous emittance, measuring luminous flux per unit area",
|
|
@@ -10684,13 +11235,17 @@
|
|
|
10684
11235
|
"occurrence": {
|
|
10685
11236
|
"tag": "occurrence",
|
|
10686
11237
|
"value": "1"
|
|
11238
|
+
},
|
|
11239
|
+
"storage_units": {
|
|
11240
|
+
"tag": "storage_units",
|
|
11241
|
+
"value": "mm"
|
|
10687
11242
|
}
|
|
10688
11243
|
},
|
|
10689
11244
|
"description": "The average of all annual precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps.",
|
|
10690
11245
|
"title": "mean annual precipitation",
|
|
10691
11246
|
"examples": [
|
|
10692
11247
|
{
|
|
10693
|
-
"value": ""
|
|
11248
|
+
"value": "225 mm"
|
|
10694
11249
|
}
|
|
10695
11250
|
],
|
|
10696
11251
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10716,13 +11271,17 @@
|
|
|
10716
11271
|
"occurrence": {
|
|
10717
11272
|
"tag": "occurrence",
|
|
10718
11273
|
"value": "1"
|
|
11274
|
+
},
|
|
11275
|
+
"storage_units": {
|
|
11276
|
+
"tag": "storage_units",
|
|
11277
|
+
"value": "Cel"
|
|
10719
11278
|
}
|
|
10720
11279
|
},
|
|
10721
11280
|
"description": "Mean annual temperature",
|
|
10722
11281
|
"title": "mean annual temperature",
|
|
10723
11282
|
"examples": [
|
|
10724
11283
|
{
|
|
10725
|
-
"value": "12.5
|
|
11284
|
+
"value": "12.5 Cel"
|
|
10726
11285
|
}
|
|
10727
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|
],
|
|
10728
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|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10782,6 +11341,10 @@
|
|
|
10782
11341
|
"occurrence": {
|
|
10783
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|
"tag": "occurrence",
|
|
10784
11343
|
"value": "1"
|
|
11344
|
+
},
|
|
11345
|
+
"units_alignment_excuse": {
|
|
11346
|
+
"tag": "units_alignment_excuse",
|
|
11347
|
+
"value": "non_ucum_unit"
|
|
10785
11348
|
}
|
|
10786
11349
|
},
|
|
10787
11350
|
"description": "API gravity is a measure of how heavy or light a petroleum liquid is compared to water (source: https://en.wikipedia.org/wiki/API_gravity) (e.g. 31.1° API)",
|
|
@@ -10938,13 +11501,17 @@
|
|
|
10938
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|
"occurrence": {
|
|
10939
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|
"tag": "occurrence",
|
|
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|
"value": "1"
|
|
11504
|
+
},
|
|
11505
|
+
"storage_units": {
|
|
11506
|
+
"tag": "storage_units",
|
|
11507
|
+
"value": "Cel"
|
|
10941
11508
|
}
|
|
10942
11509
|
},
|
|
10943
11510
|
"description": "The average of dew point measures taken at the beginning of every hour over a 24 hour period on the sampling day",
|
|
10944
11511
|
"title": "average dew point",
|
|
10945
11512
|
"examples": [
|
|
10946
11513
|
{
|
|
10947
|
-
"value": "25.5
|
|
11514
|
+
"value": "25.5 Cel"
|
|
10948
11515
|
}
|
|
10949
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|
],
|
|
10950
11517
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -10998,13 +11565,17 @@
|
|
|
10998
11565
|
"occurrence": {
|
|
10999
11566
|
"tag": "occurrence",
|
|
11000
11567
|
"value": "1"
|
|
11568
|
+
},
|
|
11569
|
+
"storage_units": {
|
|
11570
|
+
"tag": "storage_units",
|
|
11571
|
+
"value": "Cel"
|
|
11001
11572
|
}
|
|
11002
11573
|
},
|
|
11003
11574
|
"description": "The average of temperatures taken at the beginning of every hour over a 24 hour period on the sampling day",
|
|
11004
11575
|
"title": "average temperature",
|
|
11005
11576
|
"examples": [
|
|
11006
11577
|
{
|
|
11007
|
-
"value": "12.5
|
|
11578
|
+
"value": "12.5 Cel"
|
|
11008
11579
|
}
|
|
11009
11580
|
],
|
|
11010
11581
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11030,13 +11601,17 @@
|
|
|
11030
11601
|
"occurrence": {
|
|
11031
11602
|
"tag": "occurrence",
|
|
11032
11603
|
"value": "1"
|
|
11604
|
+
},
|
|
11605
|
+
"storage_units": {
|
|
11606
|
+
"tag": "storage_units",
|
|
11607
|
+
"value": "mg/m3/d"
|
|
11033
11608
|
}
|
|
11034
11609
|
},
|
|
11035
11610
|
"description": "Bacterial production in the water column measured by isotope uptake",
|
|
11036
11611
|
"title": "bacterial production",
|
|
11037
11612
|
"examples": [
|
|
11038
11613
|
{
|
|
11039
|
-
"value": "5
|
|
11614
|
+
"value": "5 mg/m3/d"
|
|
11040
11615
|
}
|
|
11041
11616
|
],
|
|
11042
11617
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11062,13 +11637,17 @@
|
|
|
11062
11637
|
"occurrence": {
|
|
11063
11638
|
"tag": "occurrence",
|
|
11064
11639
|
"value": "1"
|
|
11640
|
+
},
|
|
11641
|
+
"storage_units": {
|
|
11642
|
+
"tag": "storage_units",
|
|
11643
|
+
"value": "mg/m3/d|umol/L/h"
|
|
11065
11644
|
}
|
|
11066
11645
|
},
|
|
11067
11646
|
"description": "Measurement of bacterial respiration in the water column",
|
|
11068
11647
|
"title": "bacterial respiration",
|
|
11069
11648
|
"examples": [
|
|
11070
11649
|
{
|
|
11071
|
-
"value": "300
|
|
11650
|
+
"value": "300 umol/L/h"
|
|
11072
11651
|
}
|
|
11073
11652
|
],
|
|
11074
11653
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11094,13 +11673,17 @@
|
|
|
11094
11673
|
"occurrence": {
|
|
11095
11674
|
"tag": "occurrence",
|
|
11096
11675
|
"value": "1"
|
|
11676
|
+
},
|
|
11677
|
+
"storage_units": {
|
|
11678
|
+
"tag": "storage_units",
|
|
11679
|
+
"value": "ng/h"
|
|
11097
11680
|
}
|
|
11098
11681
|
},
|
|
11099
11682
|
"description": "Measurement of bacterial carbon production",
|
|
11100
11683
|
"title": "bacterial carbon production",
|
|
11101
11684
|
"examples": [
|
|
11102
11685
|
{
|
|
11103
|
-
"value": "
|
|
11686
|
+
"value": "50 ng/h"
|
|
11104
11687
|
}
|
|
11105
11688
|
],
|
|
11106
11689
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11126,13 +11709,17 @@
|
|
|
11126
11709
|
"occurrence": {
|
|
11127
11710
|
"tag": "occurrence",
|
|
11128
11711
|
"value": "1"
|
|
11712
|
+
},
|
|
11713
|
+
"storage_units": {
|
|
11714
|
+
"tag": "storage_units",
|
|
11715
|
+
"value": "mbar"
|
|
11129
11716
|
}
|
|
11130
11717
|
},
|
|
11131
11718
|
"description": "Force per unit area exerted against a surface by the weight of air above that surface",
|
|
11132
11719
|
"title": "barometric pressure",
|
|
11133
11720
|
"examples": [
|
|
11134
11721
|
{
|
|
11135
|
-
"value": "
|
|
11722
|
+
"value": "1013 mbar"
|
|
11136
11723
|
}
|
|
11137
11724
|
],
|
|
11138
11725
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11243,6 +11830,10 @@
|
|
|
11243
11830
|
"occurrence": {
|
|
11244
11831
|
"tag": "occurrence",
|
|
11245
11832
|
"value": "1"
|
|
11833
|
+
},
|
|
11834
|
+
"storage_units": {
|
|
11835
|
+
"tag": "storage_units",
|
|
11836
|
+
"value": "[ppm]|mg/L"
|
|
11246
11837
|
}
|
|
11247
11838
|
},
|
|
11248
11839
|
"description": "Concentration of benzene in the sample",
|
|
@@ -11275,6 +11866,10 @@
|
|
|
11275
11866
|
"occurrence": {
|
|
11276
11867
|
"tag": "occurrence",
|
|
11277
11868
|
"value": "1"
|
|
11869
|
+
},
|
|
11870
|
+
"storage_units": {
|
|
11871
|
+
"tag": "storage_units",
|
|
11872
|
+
"value": "mg/L"
|
|
11278
11873
|
}
|
|
11279
11874
|
},
|
|
11280
11875
|
"description": "Amount of dissolved oxygen needed by aerobic biological organisms in a body of water to break down organic material present in a given water sample at certain temperature over a specific time period",
|
|
@@ -11484,13 +12079,17 @@
|
|
|
11484
12079
|
"occurrence": {
|
|
11485
12080
|
"tag": "occurrence",
|
|
11486
12081
|
"value": "1"
|
|
12082
|
+
},
|
|
12083
|
+
"storage_units": {
|
|
12084
|
+
"tag": "storage_units",
|
|
12085
|
+
"value": "ug/L|ug/g"
|
|
11487
12086
|
}
|
|
11488
12087
|
},
|
|
11489
12088
|
"description": "Concentration of bishomohopanol",
|
|
11490
12089
|
"title": "bishomohopanol",
|
|
11491
12090
|
"examples": [
|
|
11492
12091
|
{
|
|
11493
|
-
"value": "14
|
|
12092
|
+
"value": "14 ug/L"
|
|
11494
12093
|
}
|
|
11495
12094
|
],
|
|
11496
12095
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11516,6 +12115,10 @@
|
|
|
11516
12115
|
"occurrence": {
|
|
11517
12116
|
"tag": "occurrence",
|
|
11518
12117
|
"value": "1"
|
|
12118
|
+
},
|
|
12119
|
+
"storage_units": {
|
|
12120
|
+
"tag": "storage_units",
|
|
12121
|
+
"value": "mm[Hg]"
|
|
11519
12122
|
}
|
|
11520
12123
|
},
|
|
11521
12124
|
"description": "Resting diastolic blood pressure, measured as mm mercury",
|
|
@@ -11548,6 +12151,10 @@
|
|
|
11548
12151
|
"occurrence": {
|
|
11549
12152
|
"tag": "occurrence",
|
|
11550
12153
|
"value": "1"
|
|
12154
|
+
},
|
|
12155
|
+
"storage_units": {
|
|
12156
|
+
"tag": "storage_units",
|
|
12157
|
+
"value": "mm[Hg]"
|
|
11551
12158
|
}
|
|
11552
12159
|
},
|
|
11553
12160
|
"description": "Resting systolic blood pressure, measured as mm mercury",
|
|
@@ -11580,13 +12187,17 @@
|
|
|
11580
12187
|
"occurrence": {
|
|
11581
12188
|
"tag": "occurrence",
|
|
11582
12189
|
"value": "1"
|
|
12190
|
+
},
|
|
12191
|
+
"storage_units": {
|
|
12192
|
+
"tag": "storage_units",
|
|
12193
|
+
"value": "[ppm]"
|
|
11583
12194
|
}
|
|
11584
12195
|
},
|
|
11585
12196
|
"description": "Concentration of bromide",
|
|
11586
12197
|
"title": "bromide",
|
|
11587
12198
|
"examples": [
|
|
11588
12199
|
{
|
|
11589
|
-
"value": "0.05
|
|
12200
|
+
"value": "0.05 [ppm]"
|
|
11590
12201
|
}
|
|
11591
12202
|
],
|
|
11592
12203
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11696,13 +12307,17 @@
|
|
|
11696
12307
|
"occurrence": {
|
|
11697
12308
|
"tag": "occurrence",
|
|
11698
12309
|
"value": "1"
|
|
12310
|
+
},
|
|
12311
|
+
"storage_units": {
|
|
12312
|
+
"tag": "storage_units",
|
|
12313
|
+
"value": "a"
|
|
11699
12314
|
}
|
|
11700
12315
|
},
|
|
11701
12316
|
"description": "The age of the built structure since construction",
|
|
11702
12317
|
"title": "built structure age",
|
|
11703
12318
|
"examples": [
|
|
11704
12319
|
{
|
|
11705
|
-
"value": "15"
|
|
12320
|
+
"value": "15 a"
|
|
11706
12321
|
}
|
|
11707
12322
|
],
|
|
11708
12323
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11786,13 +12401,17 @@
|
|
|
11786
12401
|
"occurrence": {
|
|
11787
12402
|
"tag": "occurrence",
|
|
11788
12403
|
"value": "1"
|
|
12404
|
+
},
|
|
12405
|
+
"storage_units": {
|
|
12406
|
+
"tag": "storage_units",
|
|
12407
|
+
"value": "[ppm]|mg/L|umol/L|mg/kg"
|
|
11789
12408
|
}
|
|
11790
12409
|
},
|
|
11791
12410
|
"description": "Concentration of calcium in the sample",
|
|
11792
12411
|
"title": "calcium",
|
|
11793
12412
|
"examples": [
|
|
11794
12413
|
{
|
|
11795
|
-
"value": "0.2
|
|
12414
|
+
"value": "0.2 umol/L"
|
|
11796
12415
|
}
|
|
11797
12416
|
],
|
|
11798
12417
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11818,13 +12437,17 @@
|
|
|
11818
12437
|
"occurrence": {
|
|
11819
12438
|
"tag": "occurrence",
|
|
11820
12439
|
"value": "1"
|
|
12440
|
+
},
|
|
12441
|
+
"storage_units": {
|
|
12442
|
+
"tag": "storage_units",
|
|
12443
|
+
"value": "[ppm]|umol/L"
|
|
11821
12444
|
}
|
|
11822
12445
|
},
|
|
11823
12446
|
"description": "Carbon dioxide (gas) amount or concentration at the time of sampling",
|
|
11824
12447
|
"title": "carbon dioxide",
|
|
11825
12448
|
"examples": [
|
|
11826
12449
|
{
|
|
11827
|
-
"value": "410
|
|
12450
|
+
"value": "410 [ppm]"
|
|
11828
12451
|
}
|
|
11829
12452
|
],
|
|
11830
12453
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11850,13 +12473,17 @@
|
|
|
11850
12473
|
"occurrence": {
|
|
11851
12474
|
"tag": "occurrence",
|
|
11852
12475
|
"value": "1"
|
|
12476
|
+
},
|
|
12477
|
+
"storage_units": {
|
|
12478
|
+
"tag": "storage_units",
|
|
12479
|
+
"value": "[ppm]|umol/L"
|
|
11853
12480
|
}
|
|
11854
12481
|
},
|
|
11855
12482
|
"description": "Carbon monoxide (gas) amount or concentration at the time of sampling",
|
|
11856
12483
|
"title": "carbon monoxide",
|
|
11857
12484
|
"examples": [
|
|
11858
12485
|
{
|
|
11859
|
-
"value": "0.1
|
|
12486
|
+
"value": "0.1 [ppm]"
|
|
11860
12487
|
}
|
|
11861
12488
|
],
|
|
11862
12489
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -11878,6 +12505,10 @@
|
|
|
11878
12505
|
"occurrence": {
|
|
11879
12506
|
"tag": "occurrence",
|
|
11880
12507
|
"value": "1"
|
|
12508
|
+
},
|
|
12509
|
+
"storage_units": {
|
|
12510
|
+
"tag": "storage_units",
|
|
12511
|
+
"value": "1"
|
|
11881
12512
|
}
|
|
11882
12513
|
},
|
|
11883
12514
|
"description": "Ratio of amount or concentrations of carbon to nitrogen",
|
|
@@ -11910,13 +12541,17 @@
|
|
|
11910
12541
|
"occurrence": {
|
|
11911
12542
|
"tag": "occurrence",
|
|
11912
12543
|
"value": "1"
|
|
12544
|
+
},
|
|
12545
|
+
"storage_units": {
|
|
12546
|
+
"tag": "storage_units",
|
|
12547
|
+
"value": "m2"
|
|
11913
12548
|
}
|
|
11914
12549
|
},
|
|
11915
12550
|
"description": "The area of the ceiling space within the room",
|
|
11916
12551
|
"title": "ceiling area",
|
|
11917
12552
|
"examples": [
|
|
11918
12553
|
{
|
|
11919
|
-
"value": "25
|
|
12554
|
+
"value": "25 m2"
|
|
11920
12555
|
}
|
|
11921
12556
|
],
|
|
11922
12557
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12055,6 +12690,10 @@
|
|
|
12055
12690
|
"occurrence": {
|
|
12056
12691
|
"tag": "occurrence",
|
|
12057
12692
|
"value": "1"
|
|
12693
|
+
},
|
|
12694
|
+
"storage_units": {
|
|
12695
|
+
"tag": "storage_units",
|
|
12696
|
+
"value": "J/K"
|
|
12058
12697
|
}
|
|
12059
12698
|
},
|
|
12060
12699
|
"description": "The ability of the ceiling to provide inertia against temperature fluctuations. Generally this means concrete that is exposed. A metal deck that supports a concrete slab will act thermally as long as it is exposed to room air flow",
|
|
@@ -12208,6 +12847,10 @@
|
|
|
12208
12847
|
"occurrence": {
|
|
12209
12848
|
"tag": "occurrence",
|
|
12210
12849
|
"value": "1"
|
|
12850
|
+
},
|
|
12851
|
+
"storage_units": {
|
|
12852
|
+
"tag": "storage_units",
|
|
12853
|
+
"value": "mg/L"
|
|
12211
12854
|
}
|
|
12212
12855
|
},
|
|
12213
12856
|
"description": "A measure of the capacity of water to consume oxygen during the decomposition of organic matter and the oxidation of inorganic chemicals such as ammonia and nitrite",
|
|
@@ -12327,13 +12970,17 @@
|
|
|
12327
12970
|
"occurrence": {
|
|
12328
12971
|
"tag": "occurrence",
|
|
12329
12972
|
"value": "1"
|
|
12973
|
+
},
|
|
12974
|
+
"storage_units": {
|
|
12975
|
+
"tag": "storage_units",
|
|
12976
|
+
"value": "[ppm]|mg/L"
|
|
12330
12977
|
}
|
|
12331
12978
|
},
|
|
12332
12979
|
"description": "Concentration of chloride in the sample",
|
|
12333
12980
|
"title": "chloride",
|
|
12334
12981
|
"examples": [
|
|
12335
12982
|
{
|
|
12336
|
-
"value": "5000
|
|
12983
|
+
"value": "5000 mg/L"
|
|
12337
12984
|
}
|
|
12338
12985
|
],
|
|
12339
12986
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12359,13 +13006,17 @@
|
|
|
12359
13006
|
"occurrence": {
|
|
12360
13007
|
"tag": "occurrence",
|
|
12361
13008
|
"value": "1"
|
|
13009
|
+
},
|
|
13010
|
+
"storage_units": {
|
|
13011
|
+
"tag": "storage_units",
|
|
13012
|
+
"value": "mg/m3|ug/L"
|
|
12362
13013
|
}
|
|
12363
13014
|
},
|
|
12364
13015
|
"description": "Concentration of chlorophyll",
|
|
12365
13016
|
"title": "chlorophyll",
|
|
12366
13017
|
"examples": [
|
|
12367
13018
|
{
|
|
12368
|
-
"value": "5
|
|
13019
|
+
"value": "5 mg/m3"
|
|
12369
13020
|
}
|
|
12370
13021
|
],
|
|
12371
13022
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12445,13 +13096,17 @@
|
|
|
12445
13096
|
"occurrence": {
|
|
12446
13097
|
"tag": "occurrence",
|
|
12447
13098
|
"value": "1"
|
|
13099
|
+
},
|
|
13100
|
+
"storage_units": {
|
|
13101
|
+
"tag": "storage_units",
|
|
13102
|
+
"value": "mS/cm|uS/cm"
|
|
12448
13103
|
}
|
|
12449
13104
|
},
|
|
12450
13105
|
"description": "Electrical conductivity of water",
|
|
12451
13106
|
"title": "conductivity",
|
|
12452
13107
|
"examples": [
|
|
12453
13108
|
{
|
|
12454
|
-
"value": "10
|
|
13109
|
+
"value": "10 uS/cm"
|
|
12455
13110
|
}
|
|
12456
13111
|
],
|
|
12457
13112
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12677,13 +13332,17 @@
|
|
|
12677
13332
|
"occurrence": {
|
|
12678
13333
|
"tag": "occurrence",
|
|
12679
13334
|
"value": "1"
|
|
13335
|
+
},
|
|
13336
|
+
"storage_units": {
|
|
13337
|
+
"tag": "storage_units",
|
|
13338
|
+
"value": "g/cm3|g/m3|kg/m3"
|
|
12680
13339
|
}
|
|
12681
13340
|
},
|
|
12682
13341
|
"description": "Density of the sample, which is its mass per unit volume (aka volumetric mass density)",
|
|
12683
13342
|
"title": "density",
|
|
12684
13343
|
"examples": [
|
|
12685
13344
|
{
|
|
12686
|
-
"value": "1000
|
|
13345
|
+
"value": "1000 kg/m3"
|
|
12687
13346
|
}
|
|
12688
13347
|
],
|
|
12689
13348
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12729,13 +13388,17 @@
|
|
|
12729
13388
|
"expected_value": {
|
|
12730
13389
|
"tag": "expected_value",
|
|
12731
13390
|
"value": "measurement value"
|
|
13391
|
+
},
|
|
13392
|
+
"storage_units": {
|
|
13393
|
+
"tag": "storage_units",
|
|
13394
|
+
"value": "m"
|
|
12732
13395
|
}
|
|
12733
13396
|
},
|
|
12734
13397
|
"description": "The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples.",
|
|
12735
13398
|
"title": "depth",
|
|
12736
13399
|
"examples": [
|
|
12737
13400
|
{
|
|
12738
|
-
"value": "10
|
|
13401
|
+
"value": "10 m"
|
|
12739
13402
|
}
|
|
12740
13403
|
],
|
|
12741
13404
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12761,13 +13424,17 @@
|
|
|
12761
13424
|
"occurrence": {
|
|
12762
13425
|
"tag": "occurrence",
|
|
12763
13426
|
"value": "1"
|
|
13427
|
+
},
|
|
13428
|
+
"storage_units": {
|
|
13429
|
+
"tag": "storage_units",
|
|
13430
|
+
"value": "Cel"
|
|
12764
13431
|
}
|
|
12765
13432
|
},
|
|
12766
13433
|
"description": "The temperature to which a given parcel of humid air must be cooled, at constant barometric pressure, for water vapor to condense into water.",
|
|
12767
13434
|
"title": "dew point",
|
|
12768
13435
|
"examples": [
|
|
12769
13436
|
{
|
|
12770
|
-
"value": "22
|
|
13437
|
+
"value": "22 Cel"
|
|
12771
13438
|
}
|
|
12772
13439
|
],
|
|
12773
13440
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12827,13 +13494,17 @@
|
|
|
12827
13494
|
"occurrence": {
|
|
12828
13495
|
"tag": "occurrence",
|
|
12829
13496
|
"value": "1"
|
|
13497
|
+
},
|
|
13498
|
+
"storage_units": {
|
|
13499
|
+
"tag": "storage_units",
|
|
13500
|
+
"value": "mg/L|umol/L"
|
|
12830
13501
|
}
|
|
12831
13502
|
},
|
|
12832
13503
|
"description": "Concentration of dissolved carbon dioxide in the sample or liquid portion of the sample",
|
|
12833
13504
|
"title": "dissolved carbon dioxide",
|
|
12834
13505
|
"examples": [
|
|
12835
13506
|
{
|
|
12836
|
-
"value": "5
|
|
13507
|
+
"value": "5 mg/L"
|
|
12837
13508
|
}
|
|
12838
13509
|
],
|
|
12839
13510
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12859,13 +13530,17 @@
|
|
|
12859
13530
|
"occurrence": {
|
|
12860
13531
|
"tag": "occurrence",
|
|
12861
13532
|
"value": "1"
|
|
13533
|
+
},
|
|
13534
|
+
"storage_units": {
|
|
13535
|
+
"tag": "storage_units",
|
|
13536
|
+
"value": "umol/L"
|
|
12862
13537
|
}
|
|
12863
13538
|
},
|
|
12864
13539
|
"description": "Concentration of dissolved hydrogen",
|
|
12865
13540
|
"title": "dissolved hydrogen",
|
|
12866
13541
|
"examples": [
|
|
12867
13542
|
{
|
|
12868
|
-
"value": "0.3
|
|
13543
|
+
"value": "0.3 umol/L"
|
|
12869
13544
|
}
|
|
12870
13545
|
],
|
|
12871
13546
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12891,13 +13566,17 @@
|
|
|
12891
13566
|
"occurrence": {
|
|
12892
13567
|
"tag": "occurrence",
|
|
12893
13568
|
"value": "1"
|
|
13569
|
+
},
|
|
13570
|
+
"storage_units": {
|
|
13571
|
+
"tag": "storage_units",
|
|
13572
|
+
"value": "[ppm]|mg/L|ug/L|umol/kg"
|
|
12894
13573
|
}
|
|
12895
13574
|
},
|
|
12896
13575
|
"description": "Dissolved inorganic carbon concentration in the sample, typically measured after filtering the sample using a 0.45 micrometer filter",
|
|
12897
13576
|
"title": "dissolved inorganic carbon",
|
|
12898
13577
|
"examples": [
|
|
12899
13578
|
{
|
|
12900
|
-
"value": "2059
|
|
13579
|
+
"value": "2059 umol/kg"
|
|
12901
13580
|
}
|
|
12902
13581
|
],
|
|
12903
13582
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12923,13 +13602,17 @@
|
|
|
12923
13602
|
"occurrence": {
|
|
12924
13603
|
"tag": "occurrence",
|
|
12925
13604
|
"value": "1"
|
|
13605
|
+
},
|
|
13606
|
+
"storage_units": {
|
|
13607
|
+
"tag": "storage_units",
|
|
13608
|
+
"value": "ug/L|umol/L|mg/L"
|
|
12926
13609
|
}
|
|
12927
13610
|
},
|
|
12928
13611
|
"description": "Concentration of dissolved inorganic nitrogen",
|
|
12929
13612
|
"title": "dissolved inorganic nitrogen",
|
|
12930
13613
|
"examples": [
|
|
12931
13614
|
{
|
|
12932
|
-
"value": "761
|
|
13615
|
+
"value": "761 umol/L"
|
|
12933
13616
|
}
|
|
12934
13617
|
],
|
|
12935
13618
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12955,13 +13638,17 @@
|
|
|
12955
13638
|
"occurrence": {
|
|
12956
13639
|
"tag": "occurrence",
|
|
12957
13640
|
"value": "1"
|
|
13641
|
+
},
|
|
13642
|
+
"storage_units": {
|
|
13643
|
+
"tag": "storage_units",
|
|
13644
|
+
"value": "[ppm]|mg/L|ug/L|umol/L"
|
|
12958
13645
|
}
|
|
12959
13646
|
},
|
|
12960
13647
|
"description": "Concentration of dissolved inorganic phosphorus in the sample",
|
|
12961
13648
|
"title": "dissolved inorganic phosphorus",
|
|
12962
13649
|
"examples": [
|
|
12963
13650
|
{
|
|
12964
|
-
"value": "56.5
|
|
13651
|
+
"value": "56.5 umol/L"
|
|
12965
13652
|
}
|
|
12966
13653
|
],
|
|
12967
13654
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -12987,6 +13674,10 @@
|
|
|
12987
13674
|
"occurrence": {
|
|
12988
13675
|
"tag": "occurrence",
|
|
12989
13676
|
"value": "1"
|
|
13677
|
+
},
|
|
13678
|
+
"storage_units": {
|
|
13679
|
+
"tag": "storage_units",
|
|
13680
|
+
"value": "mg/L"
|
|
12990
13681
|
}
|
|
12991
13682
|
},
|
|
12992
13683
|
"description": "Concentration of dissolved iron in the sample",
|
|
@@ -13019,13 +13710,17 @@
|
|
|
13019
13710
|
"occurrence": {
|
|
13020
13711
|
"tag": "occurrence",
|
|
13021
13712
|
"value": "1"
|
|
13713
|
+
},
|
|
13714
|
+
"storage_units": {
|
|
13715
|
+
"tag": "storage_units",
|
|
13716
|
+
"value": "mg/L|umol/L|ug/L"
|
|
13022
13717
|
}
|
|
13023
13718
|
},
|
|
13024
13719
|
"description": "Concentration of dissolved organic carbon in the sample, liquid portion of the sample, or aqueous phase of the fluid",
|
|
13025
13720
|
"title": "dissolved organic carbon",
|
|
13026
13721
|
"examples": [
|
|
13027
13722
|
{
|
|
13028
|
-
"value": "197
|
|
13723
|
+
"value": "197 umol/L"
|
|
13029
13724
|
}
|
|
13030
13725
|
],
|
|
13031
13726
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -13051,13 +13746,17 @@
|
|
|
13051
13746
|
"occurrence": {
|
|
13052
13747
|
"tag": "occurrence",
|
|
13053
13748
|
"value": "1"
|
|
13749
|
+
},
|
|
13750
|
+
"storage_units": {
|
|
13751
|
+
"tag": "storage_units",
|
|
13752
|
+
"value": "mg/L|ug/L"
|
|
13054
13753
|
}
|
|
13055
13754
|
},
|
|
13056
13755
|
"description": "Dissolved organic nitrogen concentration measured as; total dissolved nitrogen - NH4 - NO3 - NO2",
|
|
13057
13756
|
"title": "dissolved organic nitrogen",
|
|
13058
13757
|
"examples": [
|
|
13059
13758
|
{
|
|
13060
|
-
"value": "0.05
|
|
13759
|
+
"value": "0.05 mg/L"
|
|
13061
13760
|
}
|
|
13062
13761
|
],
|
|
13063
13762
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -13083,13 +13782,17 @@
|
|
|
13083
13782
|
"occurrence": {
|
|
13084
13783
|
"tag": "occurrence",
|
|
13085
13784
|
"value": "1"
|
|
13785
|
+
},
|
|
13786
|
+
"storage_units": {
|
|
13787
|
+
"tag": "storage_units",
|
|
13788
|
+
"value": "mg/L|umol/kg|umol/L"
|
|
13086
13789
|
}
|
|
13087
13790
|
},
|
|
13088
13791
|
"description": "Concentration of dissolved oxygen",
|
|
13089
13792
|
"title": "dissolved oxygen",
|
|
13090
13793
|
"examples": [
|
|
13091
13794
|
{
|
|
13092
|
-
"value": "175
|
|
13795
|
+
"value": "175 umol/L"
|
|
13093
13796
|
}
|
|
13094
13797
|
],
|
|
13095
13798
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -13115,6 +13818,10 @@
|
|
|
13115
13818
|
"occurrence": {
|
|
13116
13819
|
"tag": "occurrence",
|
|
13117
13820
|
"value": "1"
|
|
13821
|
+
},
|
|
13822
|
+
"storage_units": {
|
|
13823
|
+
"tag": "storage_units",
|
|
13824
|
+
"value": "mg/L|umol/kg"
|
|
13118
13825
|
}
|
|
13119
13826
|
},
|
|
13120
13827
|
"description": "Concentration of dissolved oxygen in the oil field produced fluids as it contributes to oxgen-corrosion and microbial activity (e.g. Mic).",
|
|
@@ -13315,13 +14022,17 @@
|
|
|
13315
14022
|
"occurrence": {
|
|
13316
14023
|
"tag": "occurrence",
|
|
13317
14024
|
"value": "1"
|
|
14025
|
+
},
|
|
14026
|
+
"storage_units": {
|
|
14027
|
+
"tag": "storage_units",
|
|
14028
|
+
"value": "m2"
|
|
13318
14029
|
}
|
|
13319
14030
|
},
|
|
13320
14031
|
"description": "The size of the door",
|
|
13321
14032
|
"title": "door area or size",
|
|
13322
14033
|
"examples": [
|
|
13323
14034
|
{
|
|
13324
|
-
"value": "2.5
|
|
14035
|
+
"value": "2.5 m2"
|
|
13325
14036
|
}
|
|
13326
14037
|
],
|
|
13327
14038
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -13460,13 +14171,17 @@
|
|
|
13460
14171
|
"occurrence": {
|
|
13461
14172
|
"tag": "occurrence",
|
|
13462
14173
|
"value": "1"
|
|
14174
|
+
},
|
|
14175
|
+
"storage_units": {
|
|
14176
|
+
"tag": "storage_units",
|
|
14177
|
+
"value": "umol/m2/s"
|
|
13463
14178
|
}
|
|
13464
14179
|
},
|
|
13465
14180
|
"description": "Visible waveband radiance and irradiance measurements in the water column",
|
|
13466
14181
|
"title": "downward PAR",
|
|
13467
14182
|
"examples": [
|
|
13468
14183
|
{
|
|
13469
|
-
"value": "28.71
|
|
14184
|
+
"value": "28.71 umol/m2/s"
|
|
13470
14185
|
}
|
|
13471
14186
|
],
|
|
13472
14187
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -13548,6 +14263,10 @@
|
|
|
13548
14263
|
"occurrence": {
|
|
13549
14264
|
"tag": "occurrence",
|
|
13550
14265
|
"value": "1"
|
|
14266
|
+
},
|
|
14267
|
+
"units_alignment_excuse": {
|
|
14268
|
+
"tag": "units_alignment_excuse",
|
|
14269
|
+
"value": "mixs_inconsistent"
|
|
13551
14270
|
}
|
|
13552
14271
|
},
|
|
13553
14272
|
"description": "Percentage of volatile solids removed from the anaerobic digestor",
|
|
@@ -13781,6 +14500,10 @@
|
|
|
13781
14500
|
"occurrence": {
|
|
13782
14501
|
"tag": "occurrence",
|
|
13783
14502
|
"value": "1"
|
|
14503
|
+
},
|
|
14504
|
+
"storage_units": {
|
|
14505
|
+
"tag": "storage_units",
|
|
14506
|
+
"value": "[ppm]|mg/L"
|
|
13784
14507
|
}
|
|
13785
14508
|
},
|
|
13786
14509
|
"description": "Concentration of ethylbenzene in the sample",
|
|
@@ -13813,6 +14536,10 @@
|
|
|
13813
14536
|
"occurrence": {
|
|
13814
14537
|
"tag": "occurrence",
|
|
13815
14538
|
"value": "1"
|
|
14539
|
+
},
|
|
14540
|
+
"storage_units": {
|
|
14541
|
+
"tag": "storage_units",
|
|
14542
|
+
"value": "m2"
|
|
13816
14543
|
}
|
|
13817
14544
|
},
|
|
13818
14545
|
"description": "The amount of exposed ductwork in the room",
|
|
@@ -13841,6 +14568,10 @@
|
|
|
13841
14568
|
"occurrence": {
|
|
13842
14569
|
"tag": "occurrence",
|
|
13843
14570
|
"value": "1"
|
|
14571
|
+
},
|
|
14572
|
+
"units_alignment_excuse": {
|
|
14573
|
+
"tag": "units_alignment_excuse",
|
|
14574
|
+
"value": "pending_analysis"
|
|
13844
14575
|
}
|
|
13845
14576
|
},
|
|
13846
14577
|
"description": "The number of exposed pipes in the room",
|
|
@@ -14214,6 +14945,10 @@
|
|
|
14214
14945
|
"occurrence": {
|
|
14215
14946
|
"tag": "occurrence",
|
|
14216
14947
|
"value": "1"
|
|
14948
|
+
},
|
|
14949
|
+
"storage_units": {
|
|
14950
|
+
"tag": "storage_units",
|
|
14951
|
+
"value": "a|d|wk"
|
|
14217
14952
|
}
|
|
14218
14953
|
},
|
|
14219
14954
|
"description": "The time period since installment of the carpet or flooring",
|
|
@@ -14246,6 +14981,10 @@
|
|
|
14246
14981
|
"occurrence": {
|
|
14247
14982
|
"tag": "occurrence",
|
|
14248
14983
|
"value": "1"
|
|
14984
|
+
},
|
|
14985
|
+
"storage_units": {
|
|
14986
|
+
"tag": "storage_units",
|
|
14987
|
+
"value": "m2"
|
|
14249
14988
|
}
|
|
14250
14989
|
},
|
|
14251
14990
|
"description": "The area of the floor space within the room",
|
|
@@ -14390,6 +15129,10 @@
|
|
|
14390
15129
|
"occurrence": {
|
|
14391
15130
|
"tag": "occurrence",
|
|
14392
15131
|
"value": "1"
|
|
15132
|
+
},
|
|
15133
|
+
"storage_units": {
|
|
15134
|
+
"tag": "storage_units",
|
|
15135
|
+
"value": "J/K"
|
|
14393
15136
|
}
|
|
14394
15137
|
},
|
|
14395
15138
|
"description": "The ability of the floor to provide inertia against temperature fluctuations",
|
|
@@ -14450,13 +15193,17 @@
|
|
|
14450
15193
|
"occurrence": {
|
|
14451
15194
|
"tag": "occurrence",
|
|
14452
15195
|
"value": "1"
|
|
15196
|
+
},
|
|
15197
|
+
"storage_units": {
|
|
15198
|
+
"tag": "storage_units",
|
|
15199
|
+
"value": "mg/m3|V"
|
|
14453
15200
|
}
|
|
14454
15201
|
},
|
|
14455
15202
|
"description": "Raw or converted fluorescence of water",
|
|
14456
15203
|
"title": "fluorescence",
|
|
14457
15204
|
"examples": [
|
|
14458
15205
|
{
|
|
14459
|
-
"value": "2.5
|
|
15206
|
+
"value": "2.5 V"
|
|
14460
15207
|
}
|
|
14461
15208
|
],
|
|
14462
15209
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -14478,6 +15225,10 @@
|
|
|
14478
15225
|
"occurrence": {
|
|
14479
15226
|
"tag": "occurrence",
|
|
14480
15227
|
"value": "1"
|
|
15228
|
+
},
|
|
15229
|
+
"storage_units": {
|
|
15230
|
+
"tag": "storage_units",
|
|
15231
|
+
"value": "1/d"
|
|
14481
15232
|
}
|
|
14482
15233
|
},
|
|
14483
15234
|
"description": "The number of times the sample location is cleaned. Frequency of cleaning might be on a Daily basis, Weekly, Monthly, Quarterly or Annually.",
|
|
@@ -14506,6 +15257,10 @@
|
|
|
14506
15257
|
"occurrence": {
|
|
14507
15258
|
"tag": "occurrence",
|
|
14508
15259
|
"value": "1"
|
|
15260
|
+
},
|
|
15261
|
+
"storage_units": {
|
|
15262
|
+
"tag": "storage_units",
|
|
15263
|
+
"value": "1/d"
|
|
14509
15264
|
}
|
|
14510
15265
|
},
|
|
14511
15266
|
"description": "The number of times a meal is cooked per week",
|
|
@@ -14750,13 +15505,17 @@
|
|
|
14750
15505
|
"occurrence": {
|
|
14751
15506
|
"tag": "occurrence",
|
|
14752
15507
|
"value": "1"
|
|
15508
|
+
},
|
|
15509
|
+
"storage_units": {
|
|
15510
|
+
"tag": "storage_units",
|
|
15511
|
+
"value": "mol/L/h"
|
|
14753
15512
|
}
|
|
14754
15513
|
},
|
|
14755
15514
|
"description": "Measurement of glucosidase activity",
|
|
14756
15515
|
"title": "glucosidase activity",
|
|
14757
15516
|
"examples": [
|
|
14758
15517
|
{
|
|
14759
|
-
"value": "5 mol
|
|
15518
|
+
"value": "5 mol/L/h"
|
|
14760
15519
|
}
|
|
14761
15520
|
],
|
|
14762
15521
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -15048,6 +15807,10 @@
|
|
|
15048
15807
|
"occurrence": {
|
|
15049
15808
|
"tag": "occurrence",
|
|
15050
15809
|
"value": "1"
|
|
15810
|
+
},
|
|
15811
|
+
"storage_units": {
|
|
15812
|
+
"tag": "storage_units",
|
|
15813
|
+
"value": "mg/L"
|
|
15051
15814
|
}
|
|
15052
15815
|
},
|
|
15053
15816
|
"description": "Original formation water salinity (prior to secondary recovery e.g. Waterflooding) expressed as TDS",
|
|
@@ -15351,6 +16114,10 @@
|
|
|
15351
16114
|
"occurrence": {
|
|
15352
16115
|
"tag": "occurrence",
|
|
15353
16116
|
"value": "1"
|
|
16117
|
+
},
|
|
16118
|
+
"storage_units": {
|
|
16119
|
+
"tag": "storage_units",
|
|
16120
|
+
"value": "cm"
|
|
15354
16121
|
}
|
|
15355
16122
|
},
|
|
15356
16123
|
"description": "The average carpet fiber height in the indoor environment",
|
|
@@ -15446,13 +16213,17 @@
|
|
|
15446
16213
|
"occurrence": {
|
|
15447
16214
|
"tag": "occurrence",
|
|
15448
16215
|
"value": "1"
|
|
16216
|
+
},
|
|
16217
|
+
"storage_units": {
|
|
16218
|
+
"tag": "storage_units",
|
|
16219
|
+
"value": "a|d|h"
|
|
15449
16220
|
}
|
|
15450
16221
|
},
|
|
15451
16222
|
"description": "Age of host at the time of sampling; relevant scale depends on species and study, e.g. Could be seconds for amoebae or centuries for trees",
|
|
15452
16223
|
"title": "host age",
|
|
15453
16224
|
"examples": [
|
|
15454
16225
|
{
|
|
15455
|
-
"value": "10
|
|
16226
|
+
"value": "10 d"
|
|
15456
16227
|
}
|
|
15457
16228
|
],
|
|
15458
16229
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -15565,13 +16336,17 @@
|
|
|
15565
16336
|
"occurrence": {
|
|
15566
16337
|
"tag": "occurrence",
|
|
15567
16338
|
"value": "1"
|
|
16339
|
+
},
|
|
16340
|
+
"storage_units": {
|
|
16341
|
+
"tag": "storage_units",
|
|
16342
|
+
"value": "Cel"
|
|
15568
16343
|
}
|
|
15569
16344
|
},
|
|
15570
16345
|
"description": "Core body temperature of the host when sample was collected",
|
|
15571
16346
|
"title": "host body temperature",
|
|
15572
16347
|
"examples": [
|
|
15573
16348
|
{
|
|
15574
|
-
"value": "15
|
|
16349
|
+
"value": "15 Cel"
|
|
15575
16350
|
}
|
|
15576
16351
|
],
|
|
15577
16352
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -15710,13 +16485,17 @@
|
|
|
15710
16485
|
"occurrence": {
|
|
15711
16486
|
"tag": "occurrence",
|
|
15712
16487
|
"value": "1"
|
|
16488
|
+
},
|
|
16489
|
+
"storage_units": {
|
|
16490
|
+
"tag": "storage_units",
|
|
16491
|
+
"value": "g|kg"
|
|
15713
16492
|
}
|
|
15714
16493
|
},
|
|
15715
16494
|
"description": "Measurement of dry mass",
|
|
15716
16495
|
"title": "host dry mass",
|
|
15717
16496
|
"examples": [
|
|
15718
16497
|
{
|
|
15719
|
-
"value": "500
|
|
16498
|
+
"value": "500 g"
|
|
15720
16499
|
}
|
|
15721
16500
|
],
|
|
15722
16501
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -15829,13 +16608,17 @@
|
|
|
15829
16608
|
"occurrence": {
|
|
15830
16609
|
"tag": "occurrence",
|
|
15831
16610
|
"value": "1"
|
|
16611
|
+
},
|
|
16612
|
+
"storage_units": {
|
|
16613
|
+
"tag": "storage_units",
|
|
16614
|
+
"value": "cm|m|mm"
|
|
15832
16615
|
}
|
|
15833
16616
|
},
|
|
15834
16617
|
"description": "The height of subject",
|
|
15835
16618
|
"title": "host height",
|
|
15836
16619
|
"examples": [
|
|
15837
16620
|
{
|
|
15838
|
-
"value": "0.1
|
|
16621
|
+
"value": "0.1 m"
|
|
15839
16622
|
}
|
|
15840
16623
|
],
|
|
15841
16624
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -15891,13 +16674,17 @@
|
|
|
15891
16674
|
"occurrence": {
|
|
15892
16675
|
"tag": "occurrence",
|
|
15893
16676
|
"value": "1"
|
|
16677
|
+
},
|
|
16678
|
+
"storage_units": {
|
|
16679
|
+
"tag": "storage_units",
|
|
16680
|
+
"value": "cm|m|mm"
|
|
15894
16681
|
}
|
|
15895
16682
|
},
|
|
15896
16683
|
"description": "The length of subject",
|
|
15897
16684
|
"title": "host length",
|
|
15898
16685
|
"examples": [
|
|
15899
16686
|
{
|
|
15900
|
-
"value": "1
|
|
16687
|
+
"value": "1 m"
|
|
15901
16688
|
}
|
|
15902
16689
|
],
|
|
15903
16690
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -16180,13 +16967,17 @@
|
|
|
16180
16967
|
"occurrence": {
|
|
16181
16968
|
"tag": "occurrence",
|
|
16182
16969
|
"value": "1"
|
|
16970
|
+
},
|
|
16971
|
+
"storage_units": {
|
|
16972
|
+
"tag": "storage_units",
|
|
16973
|
+
"value": "g|kg"
|
|
16183
16974
|
}
|
|
16184
16975
|
},
|
|
16185
16976
|
"description": "Total mass of the host at collection, the unit depends on host",
|
|
16186
16977
|
"title": "host total mass",
|
|
16187
16978
|
"examples": [
|
|
16188
16979
|
{
|
|
16189
|
-
"value": "2500
|
|
16980
|
+
"value": "2500 g"
|
|
16190
16981
|
}
|
|
16191
16982
|
],
|
|
16192
16983
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -16212,13 +17003,17 @@
|
|
|
16212
17003
|
"occurrence": {
|
|
16213
17004
|
"tag": "occurrence",
|
|
16214
17005
|
"value": "1"
|
|
17006
|
+
},
|
|
17007
|
+
"storage_units": {
|
|
17008
|
+
"tag": "storage_units",
|
|
17009
|
+
"value": "g|kg"
|
|
16215
17010
|
}
|
|
16216
17011
|
},
|
|
16217
17012
|
"description": "Measurement of wet mass",
|
|
16218
17013
|
"title": "host wet mass",
|
|
16219
17014
|
"examples": [
|
|
16220
17015
|
{
|
|
16221
|
-
"value": "1500
|
|
17016
|
+
"value": "1500 g"
|
|
16222
17017
|
}
|
|
16223
17018
|
],
|
|
16224
17019
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -16244,13 +17039,17 @@
|
|
|
16244
17039
|
"occurrence": {
|
|
16245
17040
|
"tag": "occurrence",
|
|
16246
17041
|
"value": "1"
|
|
17042
|
+
},
|
|
17043
|
+
"storage_units": {
|
|
17044
|
+
"tag": "storage_units",
|
|
17045
|
+
"value": "g/m3|%"
|
|
16247
17046
|
}
|
|
16248
17047
|
},
|
|
16249
17048
|
"description": "Amount of water vapour in the air, at the time of sampling",
|
|
16250
17049
|
"title": "humidity",
|
|
16251
17050
|
"examples": [
|
|
16252
17051
|
{
|
|
16253
|
-
"value": "25
|
|
17052
|
+
"value": "25 g/m3"
|
|
16254
17053
|
}
|
|
16255
17054
|
],
|
|
16256
17055
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -16366,6 +17165,10 @@
|
|
|
16366
17165
|
"occurrence": {
|
|
16367
17166
|
"tag": "occurrence",
|
|
16368
17167
|
"value": "1"
|
|
17168
|
+
},
|
|
17169
|
+
"storage_units": {
|
|
17170
|
+
"tag": "storage_units",
|
|
17171
|
+
"value": "%"
|
|
16369
17172
|
}
|
|
16370
17173
|
},
|
|
16371
17174
|
"description": "Percentage of industrial effluents received by wastewater treatment plant",
|
|
@@ -16432,6 +17235,10 @@
|
|
|
16432
17235
|
"occurrence": {
|
|
16433
17236
|
"tag": "occurrence",
|
|
16434
17237
|
"value": "1"
|
|
17238
|
+
},
|
|
17239
|
+
"units_alignment_excuse": {
|
|
17240
|
+
"tag": "units_alignment_excuse",
|
|
17241
|
+
"value": "mixs_inconsistent"
|
|
16435
17242
|
}
|
|
16436
17243
|
},
|
|
16437
17244
|
"description": "The recorded value at sampling time (power density)",
|
|
@@ -16520,6 +17327,10 @@
|
|
|
16520
17327
|
"occurrence": {
|
|
16521
17328
|
"tag": "occurrence",
|
|
16522
17329
|
"value": "1"
|
|
17330
|
+
},
|
|
17331
|
+
"storage_units": {
|
|
17332
|
+
"tag": "storage_units",
|
|
17333
|
+
"value": "%"
|
|
16523
17334
|
}
|
|
16524
17335
|
},
|
|
16525
17336
|
"description": "Proportion of the produced fluids derived from injected water at the time of sampling. (e.g. 87%)",
|
|
@@ -16605,13 +17416,17 @@
|
|
|
16605
17416
|
"occurrence": {
|
|
16606
17417
|
"tag": "occurrence",
|
|
16607
17418
|
"value": "1"
|
|
17419
|
+
},
|
|
17420
|
+
"storage_units": {
|
|
17421
|
+
"tag": "storage_units",
|
|
17422
|
+
"value": "lx"
|
|
16608
17423
|
}
|
|
16609
17424
|
},
|
|
16610
17425
|
"description": "Measurement of light intensity",
|
|
16611
17426
|
"title": "light intensity",
|
|
16612
17427
|
"examples": [
|
|
16613
17428
|
{
|
|
16614
|
-
"value": "0.3
|
|
17429
|
+
"value": "0.3 lx"
|
|
16615
17430
|
}
|
|
16616
17431
|
],
|
|
16617
17432
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -16871,13 +17686,17 @@
|
|
|
16871
17686
|
"occurrence": {
|
|
16872
17687
|
"tag": "occurrence",
|
|
16873
17688
|
"value": "1"
|
|
17689
|
+
},
|
|
17690
|
+
"storage_units": {
|
|
17691
|
+
"tag": "storage_units",
|
|
17692
|
+
"value": "[ppm]|mg/L|mol/L|umol/kg|mg/kg"
|
|
16874
17693
|
}
|
|
16875
17694
|
},
|
|
16876
17695
|
"description": "Concentration of magnesium in the sample",
|
|
16877
17696
|
"title": "magnesium",
|
|
16878
17697
|
"examples": [
|
|
16879
17698
|
{
|
|
16880
|
-
"value": "52.8
|
|
17699
|
+
"value": "52.8 umol/kg"
|
|
16881
17700
|
}
|
|
16882
17701
|
],
|
|
16883
17702
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -16899,6 +17718,10 @@
|
|
|
16899
17718
|
"occurrence": {
|
|
16900
17719
|
"tag": "occurrence",
|
|
16901
17720
|
"value": "1"
|
|
17721
|
+
},
|
|
17722
|
+
"storage_units": {
|
|
17723
|
+
"tag": "storage_units",
|
|
17724
|
+
"value": "1"
|
|
16902
17725
|
}
|
|
16903
17726
|
},
|
|
16904
17727
|
"description": "The maximum amount of people allowed in the indoor environment",
|
|
@@ -16931,13 +17754,17 @@
|
|
|
16931
17754
|
"occurrence": {
|
|
16932
17755
|
"tag": "occurrence",
|
|
16933
17756
|
"value": "1"
|
|
17757
|
+
},
|
|
17758
|
+
"storage_units": {
|
|
17759
|
+
"tag": "storage_units",
|
|
17760
|
+
"value": "m/s"
|
|
16934
17761
|
}
|
|
16935
17762
|
},
|
|
16936
17763
|
"description": "Measurement of mean friction velocity",
|
|
16937
17764
|
"title": "mean friction velocity",
|
|
16938
17765
|
"examples": [
|
|
16939
17766
|
{
|
|
16940
|
-
"value": "0.5
|
|
17767
|
+
"value": "0.5 m/s"
|
|
16941
17768
|
}
|
|
16942
17769
|
],
|
|
16943
17770
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -16963,13 +17790,17 @@
|
|
|
16963
17790
|
"occurrence": {
|
|
16964
17791
|
"tag": "occurrence",
|
|
16965
17792
|
"value": "1"
|
|
17793
|
+
},
|
|
17794
|
+
"storage_units": {
|
|
17795
|
+
"tag": "storage_units",
|
|
17796
|
+
"value": "m/s"
|
|
16966
17797
|
}
|
|
16967
17798
|
},
|
|
16968
17799
|
"description": "Measurement of mean peak friction velocity",
|
|
16969
17800
|
"title": "mean peak friction velocity",
|
|
16970
17801
|
"examples": [
|
|
16971
17802
|
{
|
|
16972
|
-
"value": "1
|
|
17803
|
+
"value": "1 m/s"
|
|
16973
17804
|
}
|
|
16974
17805
|
],
|
|
16975
17806
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17053,13 +17884,17 @@
|
|
|
17053
17884
|
"occurrence": {
|
|
17054
17885
|
"tag": "occurrence",
|
|
17055
17886
|
"value": "1"
|
|
17887
|
+
},
|
|
17888
|
+
"storage_units": {
|
|
17889
|
+
"tag": "storage_units",
|
|
17890
|
+
"value": "[ppb]|[ppm]|umol/L"
|
|
17056
17891
|
}
|
|
17057
17892
|
},
|
|
17058
17893
|
"description": "Methane (gas) amount or concentration at the time of sampling",
|
|
17059
17894
|
"title": "methane",
|
|
17060
17895
|
"examples": [
|
|
17061
17896
|
{
|
|
17062
|
-
"value": "1800
|
|
17897
|
+
"value": "1800 [ppb]"
|
|
17063
17898
|
}
|
|
17064
17899
|
],
|
|
17065
17900
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17114,6 +17949,10 @@
|
|
|
17114
17949
|
"occurrence": {
|
|
17115
17950
|
"tag": "occurrence",
|
|
17116
17951
|
"value": "1"
|
|
17952
|
+
},
|
|
17953
|
+
"units_alignment_excuse": {
|
|
17954
|
+
"tag": "units_alignment_excuse",
|
|
17955
|
+
"value": "complex_unit"
|
|
17117
17956
|
}
|
|
17118
17957
|
},
|
|
17119
17958
|
"description": "The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer. If you keep this, you would need to have correction factors used for conversion to the final units",
|
|
@@ -17178,8 +18017,11 @@
|
|
|
17178
18017
|
"value": "m"
|
|
17179
18018
|
}
|
|
17180
18019
|
},
|
|
17181
|
-
"description": "
|
|
18020
|
+
"description": "Structured miscellaneous property assertions for this Biosample. Use when a value cannot cleanly fit an existing, policy-governed slot.",
|
|
17182
18021
|
"title": "miscellaneous parameter",
|
|
18022
|
+
"todos": [
|
|
18023
|
+
"This slot should not be available in the submission portal."
|
|
18024
|
+
],
|
|
17183
18025
|
"examples": [
|
|
17184
18026
|
{
|
|
17185
18027
|
"value": "Bicarbonate ion concentration;2075 micromole per kilogram"
|
|
@@ -17192,7 +18034,7 @@
|
|
|
17192
18034
|
"is_a": "core field",
|
|
17193
18035
|
"string_serialization": "{text};{float} {unit}",
|
|
17194
18036
|
"slot_uri": "MIXS:0000752",
|
|
17195
|
-
"range": "
|
|
18037
|
+
"range": "PropertyAssertion",
|
|
17196
18038
|
"multivalued": true,
|
|
17197
18039
|
"inlined_as_list": true
|
|
17198
18040
|
},
|
|
@@ -17244,13 +18086,17 @@
|
|
|
17244
18086
|
"occurrence": {
|
|
17245
18087
|
"tag": "occurrence",
|
|
17246
18088
|
"value": "1"
|
|
18089
|
+
},
|
|
18090
|
+
"storage_units": {
|
|
18091
|
+
"tag": "storage_units",
|
|
18092
|
+
"value": "[ppm]|mg/L|umol/L"
|
|
17247
18093
|
}
|
|
17248
18094
|
},
|
|
17249
18095
|
"description": "Concentration of nitrate in the sample",
|
|
17250
18096
|
"title": "nitrate",
|
|
17251
18097
|
"examples": [
|
|
17252
18098
|
{
|
|
17253
|
-
"value": "65
|
|
18099
|
+
"value": "65 umol/L"
|
|
17254
18100
|
}
|
|
17255
18101
|
],
|
|
17256
18102
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17276,13 +18122,17 @@
|
|
|
17276
18122
|
"occurrence": {
|
|
17277
18123
|
"tag": "occurrence",
|
|
17278
18124
|
"value": "1"
|
|
18125
|
+
},
|
|
18126
|
+
"storage_units": {
|
|
18127
|
+
"tag": "storage_units",
|
|
18128
|
+
"value": "[ppm]|mg/L|umol/L"
|
|
17279
18129
|
}
|
|
17280
18130
|
},
|
|
17281
18131
|
"description": "Concentration of nitrite in the sample",
|
|
17282
18132
|
"title": "nitrite",
|
|
17283
18133
|
"examples": [
|
|
17284
18134
|
{
|
|
17285
|
-
"value": "0.5
|
|
18135
|
+
"value": "0.5 umol/L"
|
|
17286
18136
|
}
|
|
17287
18137
|
],
|
|
17288
18138
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17308,13 +18158,17 @@
|
|
|
17308
18158
|
"occurrence": {
|
|
17309
18159
|
"tag": "occurrence",
|
|
17310
18160
|
"value": "1"
|
|
18161
|
+
},
|
|
18162
|
+
"storage_units": {
|
|
18163
|
+
"tag": "storage_units",
|
|
18164
|
+
"value": "umol/L|%"
|
|
17311
18165
|
}
|
|
17312
18166
|
},
|
|
17313
18167
|
"description": "Concentration of nitrogen (total)",
|
|
17314
18168
|
"title": "nitrogen",
|
|
17315
18169
|
"examples": [
|
|
17316
18170
|
{
|
|
17317
|
-
"value": "4.2
|
|
18171
|
+
"value": "4.2 umol/L"
|
|
17318
18172
|
}
|
|
17319
18173
|
],
|
|
17320
18174
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17419,6 +18273,10 @@
|
|
|
17419
18273
|
"occurrence": {
|
|
17420
18274
|
"tag": "occurrence",
|
|
17421
18275
|
"value": "1"
|
|
18276
|
+
},
|
|
18277
|
+
"storage_units": {
|
|
18278
|
+
"tag": "storage_units",
|
|
18279
|
+
"value": "1"
|
|
17422
18280
|
}
|
|
17423
18281
|
},
|
|
17424
18282
|
"description": "The number of pets residing in the sampled space",
|
|
@@ -17447,6 +18305,10 @@
|
|
|
17447
18305
|
"occurrence": {
|
|
17448
18306
|
"tag": "occurrence",
|
|
17449
18307
|
"value": "1"
|
|
18308
|
+
},
|
|
18309
|
+
"storage_units": {
|
|
18310
|
+
"tag": "storage_units",
|
|
18311
|
+
"value": "1"
|
|
17450
18312
|
}
|
|
17451
18313
|
},
|
|
17452
18314
|
"description": "The number of plant(s) in the sampling space",
|
|
@@ -17475,6 +18337,10 @@
|
|
|
17475
18337
|
"occurrence": {
|
|
17476
18338
|
"tag": "occurrence",
|
|
17477
18339
|
"value": "1"
|
|
18340
|
+
},
|
|
18341
|
+
"storage_units": {
|
|
18342
|
+
"tag": "storage_units",
|
|
18343
|
+
"value": "1"
|
|
17478
18344
|
}
|
|
17479
18345
|
},
|
|
17480
18346
|
"description": "The number of individuals currently occupying in the sampling location",
|
|
@@ -17503,6 +18369,10 @@
|
|
|
17503
18369
|
"occurrence": {
|
|
17504
18370
|
"tag": "occurrence",
|
|
17505
18371
|
"value": "1"
|
|
18372
|
+
},
|
|
18373
|
+
"units_alignment_excuse": {
|
|
18374
|
+
"tag": "units_alignment_excuse",
|
|
18375
|
+
"value": "pending_analysis"
|
|
17506
18376
|
}
|
|
17507
18377
|
},
|
|
17508
18378
|
"description": "Average number of occupants at time of sampling per square footage",
|
|
@@ -17559,6 +18429,10 @@
|
|
|
17559
18429
|
"occurrence": {
|
|
17560
18430
|
"tag": "occurrence",
|
|
17561
18431
|
"value": "1"
|
|
18432
|
+
},
|
|
18433
|
+
"storage_units": {
|
|
18434
|
+
"tag": "storage_units",
|
|
18435
|
+
"value": "1"
|
|
17562
18436
|
}
|
|
17563
18437
|
},
|
|
17564
18438
|
"description": "Number of occupants present at time of sample within the given space",
|
|
@@ -17591,13 +18465,17 @@
|
|
|
17591
18465
|
"occurrence": {
|
|
17592
18466
|
"tag": "occurrence",
|
|
17593
18467
|
"value": "1"
|
|
18468
|
+
},
|
|
18469
|
+
"storage_units": {
|
|
18470
|
+
"tag": "storage_units",
|
|
18471
|
+
"value": "umol/L|%|mg/L"
|
|
17594
18472
|
}
|
|
17595
18473
|
},
|
|
17596
18474
|
"description": "Concentration of organic carbon",
|
|
17597
18475
|
"title": "organic carbon",
|
|
17598
18476
|
"examples": [
|
|
17599
18477
|
{
|
|
17600
|
-
"value": "
|
|
18478
|
+
"value": "0.015 mg/L"
|
|
17601
18479
|
}
|
|
17602
18480
|
],
|
|
17603
18481
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17656,13 +18534,17 @@
|
|
|
17656
18534
|
"occurrence": {
|
|
17657
18535
|
"tag": "occurrence",
|
|
17658
18536
|
"value": "1"
|
|
18537
|
+
},
|
|
18538
|
+
"storage_units": {
|
|
18539
|
+
"tag": "storage_units",
|
|
18540
|
+
"value": "ug/L"
|
|
17659
18541
|
}
|
|
17660
18542
|
},
|
|
17661
18543
|
"description": "Concentration of organic matter",
|
|
17662
18544
|
"title": "organic matter",
|
|
17663
18545
|
"examples": [
|
|
17664
18546
|
{
|
|
17665
|
-
"value": "
|
|
18547
|
+
"value": "200 ug/L"
|
|
17666
18548
|
}
|
|
17667
18549
|
],
|
|
17668
18550
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17688,13 +18570,17 @@
|
|
|
17688
18570
|
"occurrence": {
|
|
17689
18571
|
"tag": "occurrence",
|
|
17690
18572
|
"value": "1"
|
|
18573
|
+
},
|
|
18574
|
+
"storage_units": {
|
|
18575
|
+
"tag": "storage_units",
|
|
18576
|
+
"value": "ug/L"
|
|
17691
18577
|
}
|
|
17692
18578
|
},
|
|
17693
18579
|
"description": "Concentration of organic nitrogen",
|
|
17694
18580
|
"title": "organic nitrogen",
|
|
17695
18581
|
"examples": [
|
|
17696
18582
|
{
|
|
17697
|
-
"value": "4
|
|
18583
|
+
"value": "4 ug/L"
|
|
17698
18584
|
}
|
|
17699
18585
|
],
|
|
17700
18586
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17754,6 +18640,10 @@
|
|
|
17754
18640
|
"occurrence": {
|
|
17755
18641
|
"tag": "occurrence",
|
|
17756
18642
|
"value": "m"
|
|
18643
|
+
},
|
|
18644
|
+
"storage_units": {
|
|
18645
|
+
"tag": "storage_units",
|
|
18646
|
+
"value": "1"
|
|
17757
18647
|
}
|
|
17758
18648
|
},
|
|
17759
18649
|
"description": "Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)",
|
|
@@ -17787,6 +18677,10 @@
|
|
|
17787
18677
|
"occurrence": {
|
|
17788
18678
|
"tag": "occurrence",
|
|
17789
18679
|
"value": "1"
|
|
18680
|
+
},
|
|
18681
|
+
"storage_units": {
|
|
18682
|
+
"tag": "storage_units",
|
|
18683
|
+
"value": "m"
|
|
17790
18684
|
}
|
|
17791
18685
|
},
|
|
17792
18686
|
"description": "Depth of the original oil water contact (OWC) zone (average) (m TVDSS)",
|
|
@@ -17847,13 +18741,17 @@
|
|
|
17847
18741
|
"occurrence": {
|
|
17848
18742
|
"tag": "occurrence",
|
|
17849
18743
|
"value": "1"
|
|
18744
|
+
},
|
|
18745
|
+
"storage_units": {
|
|
18746
|
+
"tag": "storage_units",
|
|
18747
|
+
"value": "[ppm]|mg/L"
|
|
17850
18748
|
}
|
|
17851
18749
|
},
|
|
17852
18750
|
"description": "Oxygen (gas) amount or concentration at the time of sampling",
|
|
17853
18751
|
"title": "oxygen",
|
|
17854
18752
|
"examples": [
|
|
17855
18753
|
{
|
|
17856
|
-
"value": "600
|
|
18754
|
+
"value": "600 [ppm]"
|
|
17857
18755
|
}
|
|
17858
18756
|
],
|
|
17859
18757
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17879,13 +18777,17 @@
|
|
|
17879
18777
|
"occurrence": {
|
|
17880
18778
|
"tag": "occurrence",
|
|
17881
18779
|
"value": "1"
|
|
18780
|
+
},
|
|
18781
|
+
"storage_units": {
|
|
18782
|
+
"tag": "storage_units",
|
|
18783
|
+
"value": "ug/L|mg/L"
|
|
17882
18784
|
}
|
|
17883
18785
|
},
|
|
17884
18786
|
"description": "Concentration of particulate organic carbon",
|
|
17885
18787
|
"title": "particulate organic carbon",
|
|
17886
18788
|
"examples": [
|
|
17887
18789
|
{
|
|
17888
|
-
"value": "
|
|
18790
|
+
"value": "0.02 mg/L"
|
|
17889
18791
|
}
|
|
17890
18792
|
],
|
|
17891
18793
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -17911,13 +18813,17 @@
|
|
|
17911
18813
|
"occurrence": {
|
|
17912
18814
|
"tag": "occurrence",
|
|
17913
18815
|
"value": "1"
|
|
18816
|
+
},
|
|
18817
|
+
"storage_units": {
|
|
18818
|
+
"tag": "storage_units",
|
|
18819
|
+
"value": "ug/L|umol/L|mg/L"
|
|
17914
18820
|
}
|
|
17915
18821
|
},
|
|
17916
18822
|
"description": "Concentration of particulate organic nitrogen",
|
|
17917
18823
|
"title": "particulate organic nitrogen",
|
|
17918
18824
|
"examples": [
|
|
17919
18825
|
{
|
|
17920
|
-
"value": "0.3
|
|
18826
|
+
"value": "0.3 umol/L"
|
|
17921
18827
|
}
|
|
17922
18828
|
],
|
|
17923
18829
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -18124,13 +19030,17 @@
|
|
|
18124
19030
|
"occurrence": {
|
|
18125
19031
|
"tag": "occurrence",
|
|
18126
19032
|
"value": "1"
|
|
19033
|
+
},
|
|
19034
|
+
"storage_units": {
|
|
19035
|
+
"tag": "storage_units",
|
|
19036
|
+
"value": "umol/L"
|
|
18127
19037
|
}
|
|
18128
19038
|
},
|
|
18129
19039
|
"description": "Concentration of petroleum hydrocarbon",
|
|
18130
19040
|
"title": "petroleum hydrocarbon",
|
|
18131
19041
|
"examples": [
|
|
18132
19042
|
{
|
|
18133
|
-
"value": "0.05
|
|
19043
|
+
"value": "0.05 umol/L"
|
|
18134
19044
|
}
|
|
18135
19045
|
],
|
|
18136
19046
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -18277,13 +19187,17 @@
|
|
|
18277
19187
|
"occurrence": {
|
|
18278
19188
|
"tag": "occurrence",
|
|
18279
19189
|
"value": "1"
|
|
19190
|
+
},
|
|
19191
|
+
"storage_units": {
|
|
19192
|
+
"tag": "storage_units",
|
|
19193
|
+
"value": "umol/L"
|
|
18280
19194
|
}
|
|
18281
19195
|
},
|
|
18282
19196
|
"description": "Concentration of phosphate",
|
|
18283
19197
|
"title": "phosphate",
|
|
18284
19198
|
"examples": [
|
|
18285
19199
|
{
|
|
18286
|
-
"value": "0.7
|
|
19200
|
+
"value": "0.7 umol/L"
|
|
18287
19201
|
}
|
|
18288
19202
|
],
|
|
18289
19203
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -18343,13 +19257,17 @@
|
|
|
18343
19257
|
"occurrence": {
|
|
18344
19258
|
"tag": "occurrence",
|
|
18345
19259
|
"value": "1"
|
|
19260
|
+
},
|
|
19261
|
+
"storage_units": {
|
|
19262
|
+
"tag": "storage_units",
|
|
19263
|
+
"value": "umol/m2/s"
|
|
18346
19264
|
}
|
|
18347
19265
|
},
|
|
18348
19266
|
"description": "Measurement of photon flux",
|
|
18349
19267
|
"title": "photon flux",
|
|
18350
19268
|
"examples": [
|
|
18351
19269
|
{
|
|
18352
|
-
"value": "3.926
|
|
19270
|
+
"value": "3.926 umol/m2/s"
|
|
18353
19271
|
}
|
|
18354
19272
|
],
|
|
18355
19273
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -18585,13 +19503,17 @@
|
|
|
18585
19503
|
"occurrence": {
|
|
18586
19504
|
"tag": "occurrence",
|
|
18587
19505
|
"value": "1"
|
|
19506
|
+
},
|
|
19507
|
+
"storage_units": {
|
|
19508
|
+
"tag": "storage_units",
|
|
19509
|
+
"value": "[ppm]|mg/L|mg/kg"
|
|
18588
19510
|
}
|
|
18589
19511
|
},
|
|
18590
19512
|
"description": "Concentration of potassium in the sample",
|
|
18591
19513
|
"title": "potassium",
|
|
18592
19514
|
"examples": [
|
|
18593
19515
|
{
|
|
18594
|
-
"value": "463
|
|
19516
|
+
"value": "463 mg/L"
|
|
18595
19517
|
}
|
|
18596
19518
|
],
|
|
18597
19519
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -18617,6 +19539,10 @@
|
|
|
18617
19539
|
"occurrence": {
|
|
18618
19540
|
"tag": "occurrence",
|
|
18619
19541
|
"value": "1"
|
|
19542
|
+
},
|
|
19543
|
+
"storage_units": {
|
|
19544
|
+
"tag": "storage_units",
|
|
19545
|
+
"value": "Cel"
|
|
18620
19546
|
}
|
|
18621
19547
|
},
|
|
18622
19548
|
"description": "Temperature at which a liquid becomes semi solid and loses its flow characteristics. In crude oil a high pour point is generally associated with a high paraffin content, typically found in crude deriving from a larger proportion of plant material. (soure: https://en.wikipedia.org/wiki/pour_point)",
|
|
@@ -18707,13 +19633,17 @@
|
|
|
18707
19633
|
"occurrence": {
|
|
18708
19634
|
"tag": "occurrence",
|
|
18709
19635
|
"value": "1"
|
|
19636
|
+
},
|
|
19637
|
+
"storage_units": {
|
|
19638
|
+
"tag": "storage_units",
|
|
19639
|
+
"value": "atm"
|
|
18710
19640
|
}
|
|
18711
19641
|
},
|
|
18712
19642
|
"description": "Pressure to which the sample is subject to, in atmospheres",
|
|
18713
19643
|
"title": "pressure",
|
|
18714
19644
|
"examples": [
|
|
18715
19645
|
{
|
|
18716
|
-
"value": "50
|
|
19646
|
+
"value": "50 atm"
|
|
18717
19647
|
}
|
|
18718
19648
|
],
|
|
18719
19649
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -18797,13 +19727,17 @@
|
|
|
18797
19727
|
"occurrence": {
|
|
18798
19728
|
"tag": "occurrence",
|
|
18799
19729
|
"value": "1"
|
|
19730
|
+
},
|
|
19731
|
+
"storage_units": {
|
|
19732
|
+
"tag": "storage_units",
|
|
19733
|
+
"value": "g/m2/d|mg/m3/d"
|
|
18800
19734
|
}
|
|
18801
19735
|
},
|
|
18802
19736
|
"description": "Measurement of primary production, generally measured as isotope uptake",
|
|
18803
19737
|
"title": "primary production",
|
|
18804
19738
|
"examples": [
|
|
18805
19739
|
{
|
|
18806
|
-
"value": "100
|
|
19740
|
+
"value": "100 mg/m3/d"
|
|
18807
19741
|
}
|
|
18808
19742
|
],
|
|
18809
19743
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -18858,6 +19792,10 @@
|
|
|
18858
19792
|
"occurrence": {
|
|
18859
19793
|
"tag": "occurrence",
|
|
18860
19794
|
"value": "1"
|
|
19795
|
+
},
|
|
19796
|
+
"storage_units": {
|
|
19797
|
+
"tag": "storage_units",
|
|
19798
|
+
"value": "m3/d"
|
|
18861
19799
|
}
|
|
18862
19800
|
},
|
|
18863
19801
|
"description": "Oil and/or gas production rates per well (e.g. 524 m3 / day)",
|
|
@@ -19071,13 +20009,17 @@
|
|
|
19071
20009
|
"occurrence": {
|
|
19072
20010
|
"tag": "occurrence",
|
|
19073
20011
|
"value": "1"
|
|
20012
|
+
},
|
|
20013
|
+
"storage_units": {
|
|
20014
|
+
"tag": "storage_units",
|
|
20015
|
+
"value": "mV"
|
|
19074
20016
|
}
|
|
19075
20017
|
},
|
|
19076
20018
|
"description": "Redox potential, measured relative to a hydrogen cell, indicating oxidation or reduction potential",
|
|
19077
20019
|
"title": "redox potential",
|
|
19078
20020
|
"examples": [
|
|
19079
20021
|
{
|
|
19080
|
-
"value": "300
|
|
20022
|
+
"value": "300 mV"
|
|
19081
20023
|
}
|
|
19082
20024
|
],
|
|
19083
20025
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -19103,6 +20045,10 @@
|
|
|
19103
20045
|
"occurrence": {
|
|
19104
20046
|
"tag": "occurrence",
|
|
19105
20047
|
"value": "1"
|
|
20048
|
+
},
|
|
20049
|
+
"storage_units": {
|
|
20050
|
+
"tag": "storage_units",
|
|
20051
|
+
"value": "%"
|
|
19106
20052
|
}
|
|
19107
20053
|
},
|
|
19108
20054
|
"description": "Partial vapor and air pressure, density of the vapor and air, or by the actual mass of the vapor and air",
|
|
@@ -19135,6 +20081,10 @@
|
|
|
19135
20081
|
"occurrence": {
|
|
19136
20082
|
"tag": "occurrence",
|
|
19137
20083
|
"value": "1"
|
|
20084
|
+
},
|
|
20085
|
+
"units_alignment_excuse": {
|
|
20086
|
+
"tag": "units_alignment_excuse",
|
|
20087
|
+
"value": "mixs_inconsistent"
|
|
19138
20088
|
}
|
|
19139
20089
|
},
|
|
19140
20090
|
"description": "The recorded outside relative humidity value at the time of sampling",
|
|
@@ -19257,6 +20207,10 @@
|
|
|
19257
20207
|
"occurrence": {
|
|
19258
20208
|
"tag": "occurrence",
|
|
19259
20209
|
"value": "1"
|
|
20210
|
+
},
|
|
20211
|
+
"storage_units": {
|
|
20212
|
+
"tag": "storage_units",
|
|
20213
|
+
"value": "L/h"
|
|
19260
20214
|
}
|
|
19261
20215
|
},
|
|
19262
20216
|
"description": "The rate at which outside air replaces indoor air in a given space",
|
|
@@ -19611,6 +20565,10 @@
|
|
|
19611
20565
|
"occurrence": {
|
|
19612
20566
|
"tag": "occurrence",
|
|
19613
20567
|
"value": "1"
|
|
20568
|
+
},
|
|
20569
|
+
"storage_units": {
|
|
20570
|
+
"tag": "storage_units",
|
|
20571
|
+
"value": "1"
|
|
19614
20572
|
}
|
|
19615
20573
|
},
|
|
19616
20574
|
"description": "Count of room occupancy at time of sampling",
|
|
@@ -19913,6 +20871,10 @@
|
|
|
19913
20871
|
"occurrence": {
|
|
19914
20872
|
"tag": "occurrence",
|
|
19915
20873
|
"value": "1"
|
|
20874
|
+
},
|
|
20875
|
+
"storage_units": {
|
|
20876
|
+
"tag": "storage_units",
|
|
20877
|
+
"value": "[pH]"
|
|
19916
20878
|
}
|
|
19917
20879
|
},
|
|
19918
20880
|
"description": "pH measurement of the culture rooting medium; e.g. 5.5.",
|
|
@@ -20040,13 +21002,17 @@
|
|
|
20040
21002
|
"occurrence": {
|
|
20041
21003
|
"tag": "occurrence",
|
|
20042
21004
|
"value": "1"
|
|
21005
|
+
},
|
|
21006
|
+
"storage_units": {
|
|
21007
|
+
"tag": "storage_units",
|
|
21008
|
+
"value": "%|mg/L"
|
|
20043
21009
|
}
|
|
20044
21010
|
},
|
|
20045
21011
|
"description": "The total concentration of all dissolved salts in a liquid or solid sample. While salinity can be measured by a complete chemical analysis, this method is difficult and time consuming. More often, it is instead derived from the conductivity measurement. This is known as practical salinity. These derivations compare the specific conductance of the sample to a salinity standard such as seawater.",
|
|
20046
21012
|
"title": "salinity",
|
|
20047
21013
|
"examples": [
|
|
20048
21014
|
{
|
|
20049
|
-
"value": "
|
|
21015
|
+
"value": "70 mg/L"
|
|
20050
21016
|
}
|
|
20051
21017
|
],
|
|
20052
21018
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -20355,13 +21321,17 @@
|
|
|
20355
21321
|
"occurrence": {
|
|
20356
21322
|
"tag": "occurrence",
|
|
20357
21323
|
"value": "1"
|
|
21324
|
+
},
|
|
21325
|
+
"storage_units": {
|
|
21326
|
+
"tag": "storage_units",
|
|
21327
|
+
"value": "m"
|
|
20358
21328
|
}
|
|
20359
21329
|
},
|
|
20360
21330
|
"description": "In non deviated well, measured depth is equal to the true vertical depth, TVD (TVD=TVDSS plus the reference or datum it refers to). In deviated wells, the MD is the length of trajectory of the borehole measured from the same reference or datum. Common datums used are ground level (GL), drilling rig floor (DF), rotary table (RT), kelly bushing (KB) and mean sea level (MSL). If \"other\" is specified, please propose entry in \"additional info\" field",
|
|
20361
21331
|
"title": "sample measured depth",
|
|
20362
21332
|
"examples": [
|
|
20363
21333
|
{
|
|
20364
|
-
"value": "1534
|
|
21334
|
+
"value": "1534 m"
|
|
20365
21335
|
}
|
|
20366
21336
|
],
|
|
20367
21337
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -20469,13 +21439,17 @@
|
|
|
20469
21439
|
"preferred_unit": {
|
|
20470
21440
|
"tag": "preferred_unit",
|
|
20471
21441
|
"value": "millliter, gram, milligram, liter"
|
|
21442
|
+
},
|
|
21443
|
+
"storage_units": {
|
|
21444
|
+
"tag": "storage_units",
|
|
21445
|
+
"value": "L|g|mL|mg"
|
|
20472
21446
|
}
|
|
20473
21447
|
},
|
|
20474
21448
|
"description": "The total amount or size (volume (ml), mass (g) or area (m2) ) of sample collected.",
|
|
20475
21449
|
"title": "amount or size of sample collected",
|
|
20476
21450
|
"examples": [
|
|
20477
21451
|
{
|
|
20478
|
-
"value": "5
|
|
21452
|
+
"value": "5 L"
|
|
20479
21453
|
}
|
|
20480
21454
|
],
|
|
20481
21455
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -20589,13 +21563,17 @@
|
|
|
20589
21563
|
"occurrence": {
|
|
20590
21564
|
"tag": "occurrence",
|
|
20591
21565
|
"value": "1"
|
|
21566
|
+
},
|
|
21567
|
+
"storage_units": {
|
|
21568
|
+
"tag": "storage_units",
|
|
21569
|
+
"value": "Cel"
|
|
20592
21570
|
}
|
|
20593
21571
|
},
|
|
20594
21572
|
"description": "Temperature at which sample was stored, e.g. -80 degree Celsius",
|
|
20595
21573
|
"title": "sample storage temperature",
|
|
20596
21574
|
"examples": [
|
|
20597
21575
|
{
|
|
20598
|
-
"value": "-80
|
|
21576
|
+
"value": "-80 Cel"
|
|
20599
21577
|
}
|
|
20600
21578
|
],
|
|
20601
21579
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -20794,13 +21772,17 @@
|
|
|
20794
21772
|
"preferred_unit": {
|
|
20795
21773
|
"tag": "preferred_unit",
|
|
20796
21774
|
"value": "millliter, gram, milligram, square centimeter"
|
|
21775
|
+
},
|
|
21776
|
+
"storage_units": {
|
|
21777
|
+
"tag": "storage_units",
|
|
21778
|
+
"value": "cm2|g|mL|mg"
|
|
20797
21779
|
}
|
|
20798
21780
|
},
|
|
20799
21781
|
"description": "Volume (ml) or mass (g) of total collected sample processed for DNA extraction. Note: total sample collected should be entered under the term Sample Size (MIXS:0000001).",
|
|
20800
21782
|
"title": "sample volume or weight for DNA extraction",
|
|
20801
21783
|
"examples": [
|
|
20802
21784
|
{
|
|
20803
|
-
"value": "1500
|
|
21785
|
+
"value": "1500 mL"
|
|
20804
21786
|
}
|
|
20805
21787
|
],
|
|
20806
21788
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -20975,13 +21957,17 @@
|
|
|
20975
21957
|
"occurrence": {
|
|
20976
21958
|
"tag": "occurrence",
|
|
20977
21959
|
"value": "1"
|
|
21960
|
+
},
|
|
21961
|
+
"storage_units": {
|
|
21962
|
+
"tag": "storage_units",
|
|
21963
|
+
"value": "mm"
|
|
20978
21964
|
}
|
|
20979
21965
|
},
|
|
20980
21966
|
"description": "The average of all seasonal precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps.",
|
|
20981
21967
|
"title": "mean seasonal precipitation",
|
|
20982
21968
|
"examples": [
|
|
20983
21969
|
{
|
|
20984
|
-
"value": ""
|
|
21970
|
+
"value": "10 mm"
|
|
20985
21971
|
}
|
|
20986
21972
|
],
|
|
20987
21973
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21007,13 +21993,17 @@
|
|
|
21007
21993
|
"occurrence": {
|
|
21008
21994
|
"tag": "occurrence",
|
|
21009
21995
|
"value": "1"
|
|
21996
|
+
},
|
|
21997
|
+
"storage_units": {
|
|
21998
|
+
"tag": "storage_units",
|
|
21999
|
+
"value": "Cel"
|
|
21010
22000
|
}
|
|
21011
22001
|
},
|
|
21012
22002
|
"description": "Mean seasonal temperature",
|
|
21013
22003
|
"title": "mean seasonal temperature",
|
|
21014
22004
|
"examples": [
|
|
21015
22005
|
{
|
|
21016
|
-
"value": "18
|
|
22006
|
+
"value": "18 Cel"
|
|
21017
22007
|
}
|
|
21018
22008
|
],
|
|
21019
22009
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21375,13 +22365,17 @@
|
|
|
21375
22365
|
"occurrence": {
|
|
21376
22366
|
"tag": "occurrence",
|
|
21377
22367
|
"value": "1"
|
|
22368
|
+
},
|
|
22369
|
+
"storage_units": {
|
|
22370
|
+
"tag": "storage_units",
|
|
22371
|
+
"value": "umol/L"
|
|
21378
22372
|
}
|
|
21379
22373
|
},
|
|
21380
22374
|
"description": "Concentration of silicate",
|
|
21381
22375
|
"title": "silicate",
|
|
21382
22376
|
"examples": [
|
|
21383
22377
|
{
|
|
21384
|
-
"value": "0.05
|
|
22378
|
+
"value": "0.05 umol/L"
|
|
21385
22379
|
}
|
|
21386
22380
|
],
|
|
21387
22381
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21432,13 +22426,17 @@
|
|
|
21432
22426
|
"occurrence": {
|
|
21433
22427
|
"tag": "occurrence",
|
|
21434
22428
|
"value": "1"
|
|
22429
|
+
},
|
|
22430
|
+
"storage_units": {
|
|
22431
|
+
"tag": "storage_units",
|
|
22432
|
+
"value": "um"
|
|
21435
22433
|
}
|
|
21436
22434
|
},
|
|
21437
22435
|
"description": "Refers to the mesh/pore size used to pre-filter/pre-sort the sample. Materials larger than the size threshold are excluded from the sample",
|
|
21438
22436
|
"title": "size-fraction lower threshold",
|
|
21439
22437
|
"examples": [
|
|
21440
22438
|
{
|
|
21441
|
-
"value": "0.2
|
|
22439
|
+
"value": "0.2 um"
|
|
21442
22440
|
}
|
|
21443
22441
|
],
|
|
21444
22442
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21464,13 +22462,17 @@
|
|
|
21464
22462
|
"occurrence": {
|
|
21465
22463
|
"tag": "occurrence",
|
|
21466
22464
|
"value": "1"
|
|
22465
|
+
},
|
|
22466
|
+
"storage_units": {
|
|
22467
|
+
"tag": "storage_units",
|
|
22468
|
+
"value": "um"
|
|
21467
22469
|
}
|
|
21468
22470
|
},
|
|
21469
22471
|
"description": "Refers to the mesh/pore size used to retain the sample. Materials smaller than the size threshold are excluded from the sample",
|
|
21470
22472
|
"title": "size-fraction upper threshold",
|
|
21471
22473
|
"examples": [
|
|
21472
22474
|
{
|
|
21473
|
-
"value": "20
|
|
22475
|
+
"value": "20 um"
|
|
21474
22476
|
}
|
|
21475
22477
|
],
|
|
21476
22478
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21496,13 +22498,17 @@
|
|
|
21496
22498
|
"occurrence": {
|
|
21497
22499
|
"tag": "occurrence",
|
|
21498
22500
|
"value": "1"
|
|
22501
|
+
},
|
|
22502
|
+
"storage_units": {
|
|
22503
|
+
"tag": "storage_units",
|
|
22504
|
+
"value": "deg"
|
|
21499
22505
|
}
|
|
21500
22506
|
},
|
|
21501
22507
|
"description": "The direction a slope faces. While looking down a slope use a compass to record the direction you are facing (direction or degrees); e.g., nw or 315 degrees. This measure provides an indication of sun and wind exposure that will influence soil temperature and evapotranspiration.",
|
|
21502
22508
|
"title": "slope aspect",
|
|
21503
22509
|
"examples": [
|
|
21504
22510
|
{
|
|
21505
|
-
"value": ""
|
|
22511
|
+
"value": "35 deg"
|
|
21506
22512
|
}
|
|
21507
22513
|
],
|
|
21508
22514
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21528,6 +22534,10 @@
|
|
|
21528
22534
|
"occurrence": {
|
|
21529
22535
|
"tag": "occurrence",
|
|
21530
22536
|
"value": "1"
|
|
22537
|
+
},
|
|
22538
|
+
"storage_units": {
|
|
22539
|
+
"tag": "storage_units",
|
|
22540
|
+
"value": "%"
|
|
21531
22541
|
}
|
|
21532
22542
|
},
|
|
21533
22543
|
"description": "Commonly called 'slope'. The angle between ground surface and a horizontal line (in percent). This is the direction that overland water would flow. This measure is usually taken with a hand level meter or clinometer",
|
|
@@ -21560,6 +22570,10 @@
|
|
|
21560
22570
|
"occurrence": {
|
|
21561
22571
|
"tag": "occurrence",
|
|
21562
22572
|
"value": "1"
|
|
22573
|
+
},
|
|
22574
|
+
"storage_units": {
|
|
22575
|
+
"tag": "storage_units",
|
|
22576
|
+
"value": "h"
|
|
21563
22577
|
}
|
|
21564
22578
|
},
|
|
21565
22579
|
"description": "The time activated sludge remains in reactor",
|
|
@@ -21592,13 +22606,17 @@
|
|
|
21592
22606
|
"occurrence": {
|
|
21593
22607
|
"tag": "occurrence",
|
|
21594
22608
|
"value": "1"
|
|
22609
|
+
},
|
|
22610
|
+
"storage_units": {
|
|
22611
|
+
"tag": "storage_units",
|
|
22612
|
+
"value": "[ppm]|mg/L"
|
|
21595
22613
|
}
|
|
21596
22614
|
},
|
|
21597
22615
|
"description": "Sodium concentration in the sample",
|
|
21598
22616
|
"title": "sodium",
|
|
21599
22617
|
"examples": [
|
|
21600
22618
|
{
|
|
21601
|
-
"value": "10.5
|
|
22619
|
+
"value": "10.5 mg/L"
|
|
21602
22620
|
}
|
|
21603
22621
|
],
|
|
21604
22622
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21648,6 +22666,10 @@
|
|
|
21648
22666
|
"occurrence": {
|
|
21649
22667
|
"tag": "occurrence",
|
|
21650
22668
|
"value": "1"
|
|
22669
|
+
},
|
|
22670
|
+
"units_alignment_excuse": {
|
|
22671
|
+
"tag": "units_alignment_excuse",
|
|
22672
|
+
"value": "pending_analysis"
|
|
21651
22673
|
}
|
|
21652
22674
|
},
|
|
21653
22675
|
"description": "The relative proportion of different grain sizes of mineral particles in a soil, as described using a standard system; express as % sand (50 um to 2 mm), silt (2 um to 50 um), and clay (<2 um) with textural name (e.g., silty clay loam) optional.",
|
|
@@ -21767,13 +22789,17 @@
|
|
|
21767
22789
|
"occurrence": {
|
|
21768
22790
|
"tag": "occurrence",
|
|
21769
22791
|
"value": "1"
|
|
22792
|
+
},
|
|
22793
|
+
"storage_units": {
|
|
22794
|
+
"tag": "storage_units",
|
|
22795
|
+
"value": "kW/m2/d|erg/cm2/s"
|
|
21770
22796
|
}
|
|
21771
22797
|
},
|
|
21772
22798
|
"description": "The amount of solar energy that arrives at a specific area of a surface during a specific time interval",
|
|
21773
22799
|
"title": "solar irradiance",
|
|
21774
22800
|
"examples": [
|
|
21775
22801
|
{
|
|
21776
|
-
"value": "1.36
|
|
22802
|
+
"value": "1.36 kW/m2/d"
|
|
21777
22803
|
}
|
|
21778
22804
|
],
|
|
21779
22805
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21867,13 +22893,17 @@
|
|
|
21867
22893
|
"occurrence": {
|
|
21868
22894
|
"tag": "occurrence",
|
|
21869
22895
|
"value": "1"
|
|
22896
|
+
},
|
|
22897
|
+
"storage_units": {
|
|
22898
|
+
"tag": "storage_units",
|
|
22899
|
+
"value": "[ppm]|mg/L|umol/L|ug/L"
|
|
21870
22900
|
}
|
|
21871
22901
|
},
|
|
21872
22902
|
"description": "Concentration of soluble reactive phosphorus",
|
|
21873
22903
|
"title": "soluble reactive phosphorus",
|
|
21874
22904
|
"examples": [
|
|
21875
22905
|
{
|
|
21876
|
-
"value": "0.1
|
|
22906
|
+
"value": "0.1 mg/L"
|
|
21877
22907
|
}
|
|
21878
22908
|
],
|
|
21879
22909
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -21981,6 +23011,10 @@
|
|
|
21981
23011
|
"occurrence": {
|
|
21982
23012
|
"tag": "occurrence",
|
|
21983
23013
|
"value": "1"
|
|
23014
|
+
},
|
|
23015
|
+
"units_alignment_excuse": {
|
|
23016
|
+
"tag": "units_alignment_excuse",
|
|
23017
|
+
"value": "mixs_inconsistent"
|
|
21984
23018
|
}
|
|
21985
23019
|
},
|
|
21986
23020
|
"description": "The mass of water vapour in a unit mass of moist air, usually expressed as grams of vapour per kilogram of air, or, in air conditioning, as grains per pound.",
|
|
@@ -22212,13 +23246,17 @@
|
|
|
22212
23246
|
"occurrence": {
|
|
22213
23247
|
"tag": "occurrence",
|
|
22214
23248
|
"value": "1"
|
|
23249
|
+
},
|
|
23250
|
+
"storage_units": {
|
|
23251
|
+
"tag": "storage_units",
|
|
23252
|
+
"value": "[ppm]|mg/L|umol/L"
|
|
22215
23253
|
}
|
|
22216
23254
|
},
|
|
22217
23255
|
"description": "Concentration of sulfate in the sample",
|
|
22218
23256
|
"title": "sulfate",
|
|
22219
23257
|
"examples": [
|
|
22220
23258
|
{
|
|
22221
|
-
"value": "5
|
|
23259
|
+
"value": "5 umol/L"
|
|
22222
23260
|
}
|
|
22223
23261
|
],
|
|
22224
23262
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22244,6 +23282,10 @@
|
|
|
22244
23282
|
"occurrence": {
|
|
22245
23283
|
"tag": "occurrence",
|
|
22246
23284
|
"value": "1"
|
|
23285
|
+
},
|
|
23286
|
+
"storage_units": {
|
|
23287
|
+
"tag": "storage_units",
|
|
23288
|
+
"value": "mg/L"
|
|
22247
23289
|
}
|
|
22248
23290
|
},
|
|
22249
23291
|
"description": "Original sulfate concentration in the hydrocarbon resource",
|
|
@@ -22276,13 +23318,17 @@
|
|
|
22276
23318
|
"occurrence": {
|
|
22277
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|
"tag": "occurrence",
|
|
22278
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|
"value": "1"
|
|
23321
|
+
},
|
|
23322
|
+
"storage_units": {
|
|
23323
|
+
"tag": "storage_units",
|
|
23324
|
+
"value": "[ppm]|mg/L|umol/L"
|
|
22279
23325
|
}
|
|
22280
23326
|
},
|
|
22281
23327
|
"description": "Concentration of sulfide in the sample",
|
|
22282
23328
|
"title": "sulfide",
|
|
22283
23329
|
"examples": [
|
|
22284
23330
|
{
|
|
22285
|
-
"value": "2
|
|
23331
|
+
"value": "2 umol/L"
|
|
22286
23332
|
}
|
|
22287
23333
|
],
|
|
22288
23334
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22336,6 +23382,10 @@
|
|
|
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|
"occurrence": {
|
|
22337
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|
"tag": "occurrence",
|
|
22338
23384
|
"value": "1"
|
|
23385
|
+
},
|
|
23386
|
+
"storage_units": {
|
|
23387
|
+
"tag": "storage_units",
|
|
23388
|
+
"value": "%"
|
|
22339
23389
|
}
|
|
22340
23390
|
},
|
|
22341
23391
|
"description": "Surfaces: water activity as a function of air and material moisture",
|
|
@@ -22396,13 +23446,17 @@
|
|
|
22396
23446
|
"occurrence": {
|
|
22397
23447
|
"tag": "occurrence",
|
|
22398
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|
"value": "1"
|
|
23449
|
+
},
|
|
23450
|
+
"storage_units": {
|
|
23451
|
+
"tag": "storage_units",
|
|
23452
|
+
"value": "[ppm]|g/m2|g/m3"
|
|
22399
23453
|
}
|
|
22400
23454
|
},
|
|
22401
23455
|
"description": "Water held on a surface",
|
|
22402
23456
|
"title": "surface moisture",
|
|
22403
23457
|
"examples": [
|
|
22404
23458
|
{
|
|
22405
|
-
"value": "0.01
|
|
23459
|
+
"value": "0.01 g/m2"
|
|
22406
23460
|
}
|
|
22407
23461
|
],
|
|
22408
23462
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22456,13 +23510,17 @@
|
|
|
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|
"occurrence": {
|
|
22457
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|
"tag": "occurrence",
|
|
22458
23512
|
"value": "1"
|
|
23513
|
+
},
|
|
23514
|
+
"storage_units": {
|
|
23515
|
+
"tag": "storage_units",
|
|
23516
|
+
"value": "Cel"
|
|
22459
23517
|
}
|
|
22460
23518
|
},
|
|
22461
23519
|
"description": "Temperature of the surface at the time of sampling",
|
|
22462
23520
|
"title": "surface temperature",
|
|
22463
23521
|
"examples": [
|
|
22464
23522
|
{
|
|
22465
|
-
"value": "15
|
|
23523
|
+
"value": "15 Cel"
|
|
22466
23524
|
}
|
|
22467
23525
|
],
|
|
22468
23526
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22488,13 +23546,17 @@
|
|
|
22488
23546
|
"occurrence": {
|
|
22489
23547
|
"tag": "occurrence",
|
|
22490
23548
|
"value": "1"
|
|
23549
|
+
},
|
|
23550
|
+
"storage_units": {
|
|
23551
|
+
"tag": "storage_units",
|
|
23552
|
+
"value": "mg/L"
|
|
22491
23553
|
}
|
|
22492
23554
|
},
|
|
22493
23555
|
"description": "Concentration of suspended particulate matter",
|
|
22494
23556
|
"title": "suspended particulate matter",
|
|
22495
23557
|
"examples": [
|
|
22496
23558
|
{
|
|
22497
|
-
"value": "0.5
|
|
23559
|
+
"value": "0.5 mg/L"
|
|
22498
23560
|
}
|
|
22499
23561
|
],
|
|
22500
23562
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22554,6 +23616,10 @@
|
|
|
22554
23616
|
"occurrence": {
|
|
22555
23617
|
"tag": "occurrence",
|
|
22556
23618
|
"value": "1"
|
|
23619
|
+
},
|
|
23620
|
+
"storage_units": {
|
|
23621
|
+
"tag": "storage_units",
|
|
23622
|
+
"value": "mg/L"
|
|
22557
23623
|
}
|
|
22558
23624
|
},
|
|
22559
23625
|
"description": "Total Acid Number (TAN) is a measurement of acidity that is determined by the amount of potassium hydroxide in milligrams that is needed to neutralize the acids in one gram of oil. It is an important quality measurement of crude oil. (source: https://en.wikipedia.org/wiki/Total_acid_number)",
|
|
@@ -22632,13 +23698,17 @@
|
|
|
22632
23698
|
"preferred_unit": {
|
|
22633
23699
|
"tag": "preferred_unit",
|
|
22634
23700
|
"value": "degree Celsius"
|
|
23701
|
+
},
|
|
23702
|
+
"storage_units": {
|
|
23703
|
+
"tag": "storage_units",
|
|
23704
|
+
"value": "Cel"
|
|
22635
23705
|
}
|
|
22636
23706
|
},
|
|
22637
23707
|
"description": "Temperature of the sample at the time of sampling.",
|
|
22638
23708
|
"title": "temperature",
|
|
22639
23709
|
"examples": [
|
|
22640
23710
|
{
|
|
22641
|
-
"value": "25
|
|
23711
|
+
"value": "25 Cel"
|
|
22642
23712
|
}
|
|
22643
23713
|
],
|
|
22644
23714
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22664,13 +23734,17 @@
|
|
|
22664
23734
|
"occurrence": {
|
|
22665
23735
|
"tag": "occurrence",
|
|
22666
23736
|
"value": "1"
|
|
23737
|
+
},
|
|
23738
|
+
"storage_units": {
|
|
23739
|
+
"tag": "storage_units",
|
|
23740
|
+
"value": "Cel"
|
|
22667
23741
|
}
|
|
22668
23742
|
},
|
|
22669
23743
|
"description": "The recorded temperature value at sampling time outside",
|
|
22670
23744
|
"title": "temperature outside house",
|
|
22671
23745
|
"examples": [
|
|
22672
23746
|
{
|
|
22673
|
-
"value": "5
|
|
23747
|
+
"value": "5 Cel"
|
|
22674
23748
|
}
|
|
22675
23749
|
],
|
|
22676
23750
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22810,6 +23884,10 @@
|
|
|
22810
23884
|
"occurrence": {
|
|
22811
23885
|
"tag": "occurrence",
|
|
22812
23886
|
"value": "1"
|
|
23887
|
+
},
|
|
23888
|
+
"storage_units": {
|
|
23889
|
+
"tag": "storage_units",
|
|
23890
|
+
"value": "[ppm]|mg/L"
|
|
22813
23891
|
}
|
|
22814
23892
|
},
|
|
22815
23893
|
"description": "Concentration of toluene in the sample",
|
|
@@ -22842,6 +23920,10 @@
|
|
|
22842
23920
|
"occurrence": {
|
|
22843
23921
|
"tag": "occurrence",
|
|
22844
23922
|
"value": "1"
|
|
23923
|
+
},
|
|
23924
|
+
"storage_units": {
|
|
23925
|
+
"tag": "storage_units",
|
|
23926
|
+
"value": "ug/L|%"
|
|
22845
23927
|
}
|
|
22846
23928
|
},
|
|
22847
23929
|
"description": "Total carbon content",
|
|
@@ -22874,13 +23956,17 @@
|
|
|
22874
23956
|
"occurrence": {
|
|
22875
23957
|
"tag": "occurrence",
|
|
22876
23958
|
"value": "1"
|
|
23959
|
+
},
|
|
23960
|
+
"storage_units": {
|
|
23961
|
+
"tag": "storage_units",
|
|
23962
|
+
"value": "m"
|
|
22877
23963
|
}
|
|
22878
23964
|
},
|
|
22879
23965
|
"description": "Measurement of total depth of water column",
|
|
22880
23966
|
"title": "total depth of water column",
|
|
22881
23967
|
"examples": [
|
|
22882
23968
|
{
|
|
22883
|
-
"value": "500
|
|
23969
|
+
"value": "500 m"
|
|
22884
23970
|
}
|
|
22885
23971
|
],
|
|
22886
23972
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22906,13 +23992,17 @@
|
|
|
22906
23992
|
"occurrence": {
|
|
22907
23993
|
"tag": "occurrence",
|
|
22908
23994
|
"value": "1"
|
|
23995
|
+
},
|
|
23996
|
+
"storage_units": {
|
|
23997
|
+
"tag": "storage_units",
|
|
23998
|
+
"value": "ug/L|umol/L"
|
|
22909
23999
|
}
|
|
22910
24000
|
},
|
|
22911
24001
|
"description": "Total dissolved nitrogen concentration, reported as nitrogen, measured by: total dissolved nitrogen = NH4 + NO3NO2 + dissolved organic nitrogen",
|
|
22912
24002
|
"title": "total dissolved nitrogen",
|
|
22913
24003
|
"examples": [
|
|
22914
24004
|
{
|
|
22915
|
-
"value": "40
|
|
24005
|
+
"value": "40 ug/L"
|
|
22916
24006
|
}
|
|
22917
24007
|
],
|
|
22918
24008
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22938,13 +24028,17 @@
|
|
|
22938
24028
|
"occurrence": {
|
|
22939
24029
|
"tag": "occurrence",
|
|
22940
24030
|
"value": "1"
|
|
24031
|
+
},
|
|
24032
|
+
"storage_units": {
|
|
24033
|
+
"tag": "storage_units",
|
|
24034
|
+
"value": "ug/L"
|
|
22941
24035
|
}
|
|
22942
24036
|
},
|
|
22943
24037
|
"description": "Total inorganic nitrogen content",
|
|
22944
24038
|
"title": "total inorganic nitrogen",
|
|
22945
24039
|
"examples": [
|
|
22946
24040
|
{
|
|
22947
|
-
"value": "40
|
|
24041
|
+
"value": "40 ug/L"
|
|
22948
24042
|
}
|
|
22949
24043
|
],
|
|
22950
24044
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -22970,6 +24064,10 @@
|
|
|
22970
24064
|
"occurrence": {
|
|
22971
24065
|
"tag": "occurrence",
|
|
22972
24066
|
"value": "1"
|
|
24067
|
+
},
|
|
24068
|
+
"storage_units": {
|
|
24069
|
+
"tag": "storage_units",
|
|
24070
|
+
"value": "mg/L|mg/kg"
|
|
22973
24071
|
}
|
|
22974
24072
|
},
|
|
22975
24073
|
"description": "Concentration of total iron in the sample",
|
|
@@ -23002,13 +24100,17 @@
|
|
|
23002
24100
|
"occurrence": {
|
|
23003
24101
|
"tag": "occurrence",
|
|
23004
24102
|
"value": "1"
|
|
24103
|
+
},
|
|
24104
|
+
"storage_units": {
|
|
24105
|
+
"tag": "storage_units",
|
|
24106
|
+
"value": "mg/L|ug/L|umol/L|%"
|
|
23005
24107
|
}
|
|
23006
24108
|
},
|
|
23007
24109
|
"description": "Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen",
|
|
23008
24110
|
"title": "total nitrogen concentration",
|
|
23009
24111
|
"examples": [
|
|
23010
24112
|
{
|
|
23011
|
-
"value": "50
|
|
24113
|
+
"value": "50 umol/L"
|
|
23012
24114
|
}
|
|
23013
24115
|
],
|
|
23014
24116
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -23063,13 +24165,17 @@
|
|
|
23063
24165
|
"occurrence": {
|
|
23064
24166
|
"tag": "occurrence",
|
|
23065
24167
|
"value": "1"
|
|
24168
|
+
},
|
|
24169
|
+
"storage_units": {
|
|
24170
|
+
"tag": "storage_units",
|
|
24171
|
+
"value": "mg/L|ug/L|umol/L|%"
|
|
23066
24172
|
}
|
|
23067
24173
|
},
|
|
23068
24174
|
"description": "Total nitrogen content of the sample",
|
|
23069
24175
|
"title": "total nitrogen content",
|
|
23070
24176
|
"examples": [
|
|
23071
24177
|
{
|
|
23072
|
-
"value": ""
|
|
24178
|
+
"value": "5 mg/L"
|
|
23073
24179
|
}
|
|
23074
24180
|
],
|
|
23075
24181
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -23124,13 +24230,17 @@
|
|
|
23124
24230
|
"occurrence": {
|
|
23125
24231
|
"tag": "occurrence",
|
|
23126
24232
|
"value": "1"
|
|
24233
|
+
},
|
|
24234
|
+
"storage_units": {
|
|
24235
|
+
"tag": "storage_units",
|
|
24236
|
+
"value": "mg/L"
|
|
23127
24237
|
}
|
|
23128
24238
|
},
|
|
23129
24239
|
"description": "Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content",
|
|
23130
24240
|
"title": "total organic carbon",
|
|
23131
24241
|
"examples": [
|
|
23132
24242
|
{
|
|
23133
|
-
"value": ""
|
|
24243
|
+
"value": "5 mg/L"
|
|
23134
24244
|
}
|
|
23135
24245
|
],
|
|
23136
24246
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -23156,13 +24266,17 @@
|
|
|
23156
24266
|
"occurrence": {
|
|
23157
24267
|
"tag": "occurrence",
|
|
23158
24268
|
"value": "1"
|
|
24269
|
+
},
|
|
24270
|
+
"storage_units": {
|
|
24271
|
+
"tag": "storage_units",
|
|
24272
|
+
"value": "ug/L|umol/L"
|
|
23159
24273
|
}
|
|
23160
24274
|
},
|
|
23161
24275
|
"description": "Total particulate carbon content",
|
|
23162
24276
|
"title": "total particulate carbon",
|
|
23163
24277
|
"examples": [
|
|
23164
24278
|
{
|
|
23165
|
-
"value": "35
|
|
24279
|
+
"value": "35 umol/L"
|
|
23166
24280
|
}
|
|
23167
24281
|
],
|
|
23168
24282
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -23188,13 +24302,17 @@
|
|
|
23188
24302
|
"occurrence": {
|
|
23189
24303
|
"tag": "occurrence",
|
|
23190
24304
|
"value": "1"
|
|
24305
|
+
},
|
|
24306
|
+
"storage_units": {
|
|
24307
|
+
"tag": "storage_units",
|
|
24308
|
+
"value": "[ppm]|mg/L|umol/L"
|
|
23191
24309
|
}
|
|
23192
24310
|
},
|
|
23193
24311
|
"description": "Total phosphorus concentration in the sample, calculated by: total phosphorus = total dissolved phosphorus + particulate phosphorus",
|
|
23194
24312
|
"title": "total phosphorus",
|
|
23195
24313
|
"examples": [
|
|
23196
24314
|
{
|
|
23197
|
-
"value": "0.03
|
|
24315
|
+
"value": "0.03 mg/L"
|
|
23198
24316
|
}
|
|
23199
24317
|
],
|
|
23200
24318
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -23220,6 +24338,10 @@
|
|
|
23220
24338
|
"occurrence": {
|
|
23221
24339
|
"tag": "occurrence",
|
|
23222
24340
|
"value": "1"
|
|
24341
|
+
},
|
|
24342
|
+
"storage_units": {
|
|
24343
|
+
"tag": "storage_units",
|
|
24344
|
+
"value": "ug/L|umol/L"
|
|
23223
24345
|
}
|
|
23224
24346
|
},
|
|
23225
24347
|
"description": "Total amount or concentration of phosphate",
|
|
@@ -23252,6 +24374,10 @@
|
|
|
23252
24374
|
"occurrence": {
|
|
23253
24375
|
"tag": "occurrence",
|
|
23254
24376
|
"value": "1"
|
|
24377
|
+
},
|
|
24378
|
+
"storage_units": {
|
|
24379
|
+
"tag": "storage_units",
|
|
24380
|
+
"value": "[ppm]|mg/L"
|
|
23255
24381
|
}
|
|
23256
24382
|
},
|
|
23257
24383
|
"description": "Concentration of total sulfur in the sample",
|
|
@@ -23368,13 +24494,17 @@
|
|
|
23368
24494
|
"occurrence": {
|
|
23369
24495
|
"tag": "occurrence",
|
|
23370
24496
|
"value": "1"
|
|
24497
|
+
},
|
|
24498
|
+
"storage_units": {
|
|
24499
|
+
"tag": "storage_units",
|
|
24500
|
+
"value": "[NTU]|[FNU]"
|
|
23371
24501
|
}
|
|
23372
24502
|
},
|
|
23373
24503
|
"description": "Measure of the amount of cloudiness or haziness in water caused by individual particles",
|
|
23374
24504
|
"title": "turbidity",
|
|
23375
24505
|
"examples": [
|
|
23376
24506
|
{
|
|
23377
|
-
"value": "0.3
|
|
24507
|
+
"value": "0.3 [NTU]"
|
|
23378
24508
|
}
|
|
23379
24509
|
],
|
|
23380
24510
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -23400,6 +24530,10 @@
|
|
|
23400
24530
|
"occurrence": {
|
|
23401
24531
|
"tag": "occurrence",
|
|
23402
24532
|
"value": "1"
|
|
24533
|
+
},
|
|
24534
|
+
"storage_units": {
|
|
24535
|
+
"tag": "storage_units",
|
|
24536
|
+
"value": "m"
|
|
23403
24537
|
}
|
|
23404
24538
|
},
|
|
23405
24539
|
"description": "True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original pressure was measured (e.g. 1578 m).",
|
|
@@ -23432,6 +24566,10 @@
|
|
|
23432
24566
|
"occurrence": {
|
|
23433
24567
|
"tag": "occurrence",
|
|
23434
24568
|
"value": "1"
|
|
24569
|
+
},
|
|
24570
|
+
"units_alignment_excuse": {
|
|
24571
|
+
"tag": "units_alignment_excuse",
|
|
24572
|
+
"value": "complex_unit"
|
|
23435
24573
|
}
|
|
23436
24574
|
},
|
|
23437
24575
|
"description": "True vertical depth subsea (TVDSS) of the hydrocarbon resource where the original temperature was measured (e.g. 1345 m).",
|
|
@@ -23492,13 +24630,17 @@
|
|
|
23492
24630
|
"occurrence": {
|
|
23493
24631
|
"tag": "occurrence",
|
|
23494
24632
|
"value": "1"
|
|
24633
|
+
},
|
|
24634
|
+
"storage_units": {
|
|
24635
|
+
"tag": "storage_units",
|
|
24636
|
+
"value": "L/s|m3/min"
|
|
23495
24637
|
}
|
|
23496
24638
|
},
|
|
23497
24639
|
"description": "Ventilation rate of the system in the sampled premises",
|
|
23498
24640
|
"title": "ventilation rate",
|
|
23499
24641
|
"examples": [
|
|
23500
24642
|
{
|
|
23501
|
-
"value": "750
|
|
24643
|
+
"value": "750 m3/min"
|
|
23502
24644
|
}
|
|
23503
24645
|
],
|
|
23504
24646
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -23553,6 +24695,10 @@
|
|
|
23553
24695
|
"occurrence": {
|
|
23554
24696
|
"tag": "occurrence",
|
|
23555
24697
|
"value": "1"
|
|
24698
|
+
},
|
|
24699
|
+
"storage_units": {
|
|
24700
|
+
"tag": "storage_units",
|
|
24701
|
+
"value": "[ppm]|mg/L"
|
|
23556
24702
|
}
|
|
23557
24703
|
},
|
|
23558
24704
|
"description": "Concentration of Volatile Fatty Acids in the sample",
|
|
@@ -23585,6 +24731,10 @@
|
|
|
23585
24731
|
"occurrence": {
|
|
23586
24732
|
"tag": "occurrence",
|
|
23587
24733
|
"value": "1"
|
|
24734
|
+
},
|
|
24735
|
+
"storage_units": {
|
|
24736
|
+
"tag": "storage_units",
|
|
24737
|
+
"value": "mg/L"
|
|
23588
24738
|
}
|
|
23589
24739
|
},
|
|
23590
24740
|
"description": "Original volatile fatty acid concentration in the hydrocarbon resource",
|
|
@@ -23712,6 +24862,10 @@
|
|
|
23712
24862
|
"occurrence": {
|
|
23713
24863
|
"tag": "occurrence",
|
|
23714
24864
|
"value": "1"
|
|
24865
|
+
},
|
|
24866
|
+
"storage_units": {
|
|
24867
|
+
"tag": "storage_units",
|
|
24868
|
+
"value": "m2"
|
|
23715
24869
|
}
|
|
23716
24870
|
},
|
|
23717
24871
|
"description": "The total area of the sampled room's walls",
|
|
@@ -23800,6 +24954,10 @@
|
|
|
23800
24954
|
"occurrence": {
|
|
23801
24955
|
"tag": "occurrence",
|
|
23802
24956
|
"value": "1"
|
|
24957
|
+
},
|
|
24958
|
+
"storage_units": {
|
|
24959
|
+
"tag": "storage_units",
|
|
24960
|
+
"value": "cm"
|
|
23803
24961
|
}
|
|
23804
24962
|
},
|
|
23805
24963
|
"description": "The average height of the walls in the sampled room",
|
|
@@ -23916,6 +25074,10 @@
|
|
|
23916
25074
|
"occurrence": {
|
|
23917
25075
|
"tag": "occurrence",
|
|
23918
25076
|
"value": "1"
|
|
25077
|
+
},
|
|
25078
|
+
"storage_units": {
|
|
25079
|
+
"tag": "storage_units",
|
|
25080
|
+
"value": "J/K"
|
|
23919
25081
|
}
|
|
23920
25082
|
},
|
|
23921
25083
|
"description": "The ability of the wall to provide inertia against temperature fluctuations. Generally this means concrete or concrete block that is either exposed or covered only with paint",
|
|
@@ -24067,13 +25229,17 @@
|
|
|
24067
25229
|
"occurrence": {
|
|
24068
25230
|
"tag": "occurrence",
|
|
24069
25231
|
"value": "1"
|
|
25232
|
+
},
|
|
25233
|
+
"storage_units": {
|
|
25234
|
+
"tag": "storage_units",
|
|
25235
|
+
"value": "[kn_i]|m3/s"
|
|
24070
25236
|
}
|
|
24071
25237
|
},
|
|
24072
25238
|
"description": "Measurement of magnitude and direction of flow within a fluid",
|
|
24073
25239
|
"title": "water current",
|
|
24074
25240
|
"examples": [
|
|
24075
25241
|
{
|
|
24076
|
-
"value": "10
|
|
25242
|
+
"value": "10 m3/s"
|
|
24077
25243
|
}
|
|
24078
25244
|
],
|
|
24079
25245
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -24099,6 +25265,10 @@
|
|
|
24099
25265
|
"occurrence": {
|
|
24100
25266
|
"tag": "occurrence",
|
|
24101
25267
|
"value": "1"
|
|
25268
|
+
},
|
|
25269
|
+
"storage_units": {
|
|
25270
|
+
"tag": "storage_units",
|
|
25271
|
+
"value": "%"
|
|
24102
25272
|
}
|
|
24103
25273
|
},
|
|
24104
25274
|
"description": "Current amount of water (%) in a produced fluid stream; or the average of the combined streams",
|
|
@@ -24131,6 +25301,10 @@
|
|
|
24131
25301
|
"occurrence": {
|
|
24132
25302
|
"tag": "occurrence",
|
|
24133
25303
|
"value": "1"
|
|
25304
|
+
},
|
|
25305
|
+
"storage_units": {
|
|
25306
|
+
"tag": "storage_units",
|
|
25307
|
+
"value": "m2"
|
|
24134
25308
|
}
|
|
24135
25309
|
},
|
|
24136
25310
|
"description": "The size of the water feature",
|
|
@@ -24191,6 +25365,10 @@
|
|
|
24191
25365
|
"occurrence": {
|
|
24192
25366
|
"tag": "occurrence",
|
|
24193
25367
|
"value": "1"
|
|
25368
|
+
},
|
|
25369
|
+
"storage_units": {
|
|
25370
|
+
"tag": "storage_units",
|
|
25371
|
+
"value": "m3/d"
|
|
24194
25372
|
}
|
|
24195
25373
|
},
|
|
24196
25374
|
"description": "Water production rates per well (e.g. 987 m3 / day)",
|
|
@@ -24377,13 +25555,17 @@
|
|
|
24377
25555
|
"occurrence": {
|
|
24378
25556
|
"tag": "occurrence",
|
|
24379
25557
|
"value": "1"
|
|
25558
|
+
},
|
|
25559
|
+
"storage_units": {
|
|
25560
|
+
"tag": "storage_units",
|
|
25561
|
+
"value": "km/h|m/s"
|
|
24380
25562
|
}
|
|
24381
25563
|
},
|
|
24382
25564
|
"description": "Speed of wind measured at the time of sampling",
|
|
24383
25565
|
"title": "wind speed",
|
|
24384
25566
|
"examples": [
|
|
24385
25567
|
{
|
|
24386
|
-
"value": "21
|
|
25568
|
+
"value": "21 km/h"
|
|
24387
25569
|
}
|
|
24388
25570
|
],
|
|
24389
25571
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
@@ -24724,6 +25906,10 @@
|
|
|
24724
25906
|
"occurrence": {
|
|
24725
25907
|
"tag": "occurrence",
|
|
24726
25908
|
"value": "1"
|
|
25909
|
+
},
|
|
25910
|
+
"storage_units": {
|
|
25911
|
+
"tag": "storage_units",
|
|
25912
|
+
"value": "[ppm]|mg/L"
|
|
24727
25913
|
}
|
|
24728
25914
|
},
|
|
24729
25915
|
"description": "Concentration of xylene in the sample",
|
|
@@ -25047,6 +26233,12 @@
|
|
|
25047
26233
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
25048
26234
|
"range": "FailureWhatEnum"
|
|
25049
26235
|
},
|
|
26236
|
+
"protocol_for": {
|
|
26237
|
+
"name": "protocol_for",
|
|
26238
|
+
"description": "The type of planned process that the protocol describes.",
|
|
26239
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
26240
|
+
"range": "ProtocolForEnum"
|
|
26241
|
+
},
|
|
25050
26242
|
"emsl_store_temp": {
|
|
25051
26243
|
"name": "emsl_store_temp",
|
|
25052
26244
|
"description": "The temperature at which the sample should be stored upon delivery to EMSL",
|
|
@@ -27766,11 +28958,6 @@
|
|
|
27766
28958
|
"description": "The direction a slope faces. While looking down a slope use a compass to record the direction you are facing (direction or degrees). This measure provides an indication of sun and wind exposure that will influence soil temperature and evapotranspiration.",
|
|
27767
28959
|
"comments": [
|
|
27768
28960
|
"Aspect is the orientation of slope, measured clockwise in degrees from 0 to 360, where 0 is north-facing, 90 is east-facing, 180 is south-facing, and 270 is west-facing."
|
|
27769
|
-
],
|
|
27770
|
-
"examples": [
|
|
27771
|
-
{
|
|
27772
|
-
"value": "35"
|
|
27773
|
-
}
|
|
27774
28961
|
]
|
|
27775
28962
|
},
|
|
27776
28963
|
"slope_gradient": {
|
|
@@ -27823,14 +29010,6 @@
|
|
|
27823
29010
|
}
|
|
27824
29011
|
]
|
|
27825
29012
|
},
|
|
27826
|
-
"annual_precpt": {
|
|
27827
|
-
"name": "annual_precpt",
|
|
27828
|
-
"examples": [
|
|
27829
|
-
{
|
|
27830
|
-
"value": "8.94 inch"
|
|
27831
|
-
}
|
|
27832
|
-
]
|
|
27833
|
-
},
|
|
27834
29013
|
"cur_vegetation": {
|
|
27835
29014
|
"name": "cur_vegetation",
|
|
27836
29015
|
"description": "Vegetation classification from one or more standard classification systems, or agricultural crop",
|
|
@@ -27915,14 +29094,6 @@
|
|
|
27915
29094
|
],
|
|
27916
29095
|
"comments": [
|
|
27917
29096
|
"Seasons are defined as spring (March, April, May), summer (June, July, August), autumn (September, October, November) and winter (December, January, February)."
|
|
27918
|
-
],
|
|
27919
|
-
"examples": [
|
|
27920
|
-
{
|
|
27921
|
-
"value": "0.4 inch"
|
|
27922
|
-
},
|
|
27923
|
-
{
|
|
27924
|
-
"value": "10.16 mm"
|
|
27925
|
-
}
|
|
27926
29097
|
]
|
|
27927
29098
|
},
|
|
27928
29099
|
"water_cont_soil_meth": {
|
|
@@ -28015,14 +29186,6 @@
|
|
|
28015
29186
|
}
|
|
28016
29187
|
]
|
|
28017
29188
|
},
|
|
28018
|
-
"tot_nitro_content": {
|
|
28019
|
-
"name": "tot_nitro_content",
|
|
28020
|
-
"examples": [
|
|
28021
|
-
{
|
|
28022
|
-
"value": "5 mg N/ L"
|
|
28023
|
-
}
|
|
28024
|
-
]
|
|
28025
|
-
},
|
|
28026
29189
|
"tot_org_c_meth": {
|
|
28027
29190
|
"name": "tot_org_c_meth",
|
|
28028
29191
|
"examples": [
|
|
@@ -28035,11 +29198,6 @@
|
|
|
28035
29198
|
"name": "tot_org_carb",
|
|
28036
29199
|
"todos": [
|
|
28037
29200
|
"check description. How are they different?"
|
|
28038
|
-
],
|
|
28039
|
-
"examples": [
|
|
28040
|
-
{
|
|
28041
|
-
"value": "5 mg N/ L"
|
|
28042
|
-
}
|
|
28043
29201
|
]
|
|
28044
29202
|
},
|
|
28045
29203
|
"salinity_meth": {
|
|
@@ -28512,7 +29670,9 @@
|
|
|
28512
29670
|
},
|
|
28513
29671
|
"has_unit": {
|
|
28514
29672
|
"name": "has_unit",
|
|
28515
|
-
"description": "The unit of the quantity"
|
|
29673
|
+
"description": "The unit of the quantity",
|
|
29674
|
+
"range": "UnitEnum",
|
|
29675
|
+
"required": true
|
|
28516
29676
|
},
|
|
28517
29677
|
"has_numeric_value": {
|
|
28518
29678
|
"name": "has_numeric_value",
|
|
@@ -28659,6 +29819,77 @@
|
|
|
28659
29819
|
},
|
|
28660
29820
|
"class_uri": "nmdc:GeolocationValue"
|
|
28661
29821
|
},
|
|
29822
|
+
"PropertyAssertion": {
|
|
29823
|
+
"name": "PropertyAssertion",
|
|
29824
|
+
"description": "A structured record of data that doesn't fit nicely within the constraints of other NMDC AttributeValues. Uses primitive ranges only.",
|
|
29825
|
+
"comments": [
|
|
29826
|
+
"This class enables flexible metadata capture for properties that don't align with existing, policy-governed slots in NMDC schema.",
|
|
29827
|
+
"Interoperability note: This approach is aligned with the BERtron schema's 'properties' slot pattern (see https://github.com/ber-data/bertron-schema), which uses any_of to support both TextValue and QuantityValue ranges. NMDC's PropertyAssertion provides a more granular approach by using primitive types with optional semantic annotations, enabling better validation while maintaining flexibility for diverse metadata types.",
|
|
29828
|
+
"PropertyAssertion supports both categorical values (via has_value_term_id) and numeric values (via has_numeric_value with optional min/max ranges), along with temporal (has_datetime_value) and boolean (has_boolean_value) data types."
|
|
29829
|
+
],
|
|
29830
|
+
"examples": [
|
|
29831
|
+
{
|
|
29832
|
+
"description": "Data provided from submission that doesn't conform to required abs_air_humidity units",
|
|
29833
|
+
"object": {
|
|
29834
|
+
"type": "nmdc:PropertyAssertion",
|
|
29835
|
+
"has_raw_value": "50 kPa",
|
|
29836
|
+
"has_attribute_id": "MIXS:0000122",
|
|
29837
|
+
"has_attribute_label": "absolute air humidity",
|
|
29838
|
+
"has_numeric_value": 50,
|
|
29839
|
+
"has_unit": "kPa"
|
|
29840
|
+
}
|
|
29841
|
+
},
|
|
29842
|
+
{
|
|
29843
|
+
"description": "Data provided from submission that doesn't conform to required UCUM unit",
|
|
29844
|
+
"object": {
|
|
29845
|
+
"type": "nmdc:PropertyAssertion",
|
|
29846
|
+
"has_raw_value": "5.5 mL/L",
|
|
29847
|
+
"has_attribute_id": "MIXS:0000119",
|
|
29848
|
+
"has_attribute_label": "dissolved oxygen",
|
|
29849
|
+
"has_numeric_value": 5.5,
|
|
29850
|
+
"has_unit": "mL/L"
|
|
29851
|
+
}
|
|
29852
|
+
},
|
|
29853
|
+
{
|
|
29854
|
+
"description": "Unit provided is invalid for UCUM and standard",
|
|
29855
|
+
"object": {
|
|
29856
|
+
"type": "nmdc:PropertyAssertion",
|
|
29857
|
+
"has_raw_value": "250 W/m2",
|
|
29858
|
+
"has_attribute_id": "MIXS:0000112",
|
|
29859
|
+
"has_attribute_label": "solar irradiance",
|
|
29860
|
+
"has_numeric_value": 250,
|
|
29861
|
+
"has_unit": "W/m2"
|
|
29862
|
+
}
|
|
29863
|
+
}
|
|
29864
|
+
],
|
|
29865
|
+
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
29866
|
+
"is_a": "AttributeValue",
|
|
29867
|
+
"slots": [
|
|
29868
|
+
"has_attribute_label",
|
|
29869
|
+
"has_attribute_id",
|
|
29870
|
+
"has_quantity_kind_id",
|
|
29871
|
+
"has_value_term_id",
|
|
29872
|
+
"has_boolean_value",
|
|
29873
|
+
"has_datetime_value",
|
|
29874
|
+
"has_numeric_value",
|
|
29875
|
+
"has_minimum_numeric_value",
|
|
29876
|
+
"has_maximum_numeric_value",
|
|
29877
|
+
"has_unit"
|
|
29878
|
+
],
|
|
29879
|
+
"slot_usage": {
|
|
29880
|
+
"has_raw_value": {
|
|
29881
|
+
"name": "has_raw_value",
|
|
29882
|
+
"description": "Original contributor string representation (unparsed)",
|
|
29883
|
+
"required": true
|
|
29884
|
+
},
|
|
29885
|
+
"has_unit": {
|
|
29886
|
+
"name": "has_unit",
|
|
29887
|
+
"description": "UCUM unit code (required only when numeric value is present)",
|
|
29888
|
+
"required": false
|
|
29889
|
+
}
|
|
29890
|
+
},
|
|
29891
|
+
"class_uri": "nmdc:PropertyAssertion"
|
|
29892
|
+
},
|
|
28662
29893
|
"NamedThing": {
|
|
28663
29894
|
"name": "NamedThing",
|
|
28664
29895
|
"description": "a databased entity or concept/class",
|
|
@@ -28760,7 +29991,7 @@
|
|
|
28760
29991
|
},
|
|
28761
29992
|
"Instrument": {
|
|
28762
29993
|
"name": "Instrument",
|
|
28763
|
-
"description": "A material entity that is designed to perform a function in a scientific investigation, but is not a reagent.",
|
|
29994
|
+
"description": "A material entity that is designed to perform a function in a scientific investigation, but is not a reagent. This class models the make and model of the instrument, not the specific instance of the instrument.",
|
|
28764
29995
|
"from_schema": "https://w3id.org/nmdc/nmdc",
|
|
28765
29996
|
"aliases": [
|
|
28766
29997
|
"device"
|
|
@@ -28783,7 +30014,17 @@
|
|
|
28783
30014
|
}
|
|
28784
30015
|
}
|
|
28785
30016
|
},
|
|
28786
|
-
"class_uri": "nmdc:Instrument"
|
|
30017
|
+
"class_uri": "nmdc:Instrument",
|
|
30018
|
+
"unique_keys": {
|
|
30019
|
+
"main": {
|
|
30020
|
+
"unique_key_name": "main",
|
|
30021
|
+
"unique_key_slots": [
|
|
30022
|
+
"vendor",
|
|
30023
|
+
"model"
|
|
30024
|
+
],
|
|
30025
|
+
"description": "A unique instrument is defined by its vendor and model."
|
|
30026
|
+
}
|
|
30027
|
+
}
|
|
28787
30028
|
},
|
|
28788
30029
|
"PlannedProcess": {
|
|
28789
30030
|
"name": "PlannedProcess",
|
|
@@ -28811,7 +30052,9 @@
|
|
|
28811
30052
|
"url",
|
|
28812
30053
|
"name",
|
|
28813
30054
|
"type",
|
|
28814
|
-
"description"
|
|
30055
|
+
"description",
|
|
30056
|
+
"protocol_for",
|
|
30057
|
+
"analysis_type"
|
|
28815
30058
|
],
|
|
28816
30059
|
"class_uri": "nmdc:Protocol"
|
|
28817
30060
|
},
|