nkululeko 0.65.4__py3-none-any.whl → 0.65.5__py3-none-any.whl

nkululeko/constants.py

@@ -1,2 +1,2 @@
-VERSION="0.65.4"
+VERSION="0.65.5"
 SAMPLING_RATE=16000

nkululeko/plots.py

@@ -57,6 +57,8 @@ class Plots():
         bin_reals = eval(self.util.config_val('EXPL', 'bin_reals', 'True'))
         for att in attributes:
             if len(att) == 1:
+                if att[0] not in df:
+                    self.util.error(f'unknown feature: {att[0]}')
                 self.util.debug(f'plotting {att[0]}')
                 filename = f'{self.target}-{att[0]}'
                 if self.util.is_categorical(df[att[0]]):
@@ -90,6 +92,10 @@ class Plots():
                 plt.close(fig)
                 # fig.clear()           # avoid error
             elif len(att) == 2:
+                if att[0] not in df:
+                    self.util.error(f'unknown feature: {att[0]}')
+                if att[1] not in df:
+                    self.util.error(f'unknown feature: {att[1]}')
                 self.util.debug(f'plotting {att}')
                 att1 = att[0]
                 att2 = att[1]

nkululeko/utils/stats.py

@@ -3,6 +3,14 @@ import math
 import numpy as np
 import pandas as pd
 
+def check_na(a):
+    if np.isnan(a).any():
+        count = np.count_nonzero(np.isnan(a))
+        print(f'WARNING: got {count} Nans (of {len(a)}), setting to 0')
+        a[np.isnan(a)] = 0
+        return a 
+    else:
+        return a
 
 def cohen_d(d1, d2):
     """
@@ -13,6 +21,9 @@ def cohen_d(d1, d2):
     Returns:
         Cohen's d with precision 3
     """
+    # Checks:
+    d1 = check_na(d1)
+    d2 = check_na(d2)
     # calculate the size of samples
     n1, n2 = len(d1), len(d2)
     # calculate the variance of the samples
@@ -23,7 +34,7 @@ def cohen_d(d1, d2):
     u1, u2 = np.mean(d1), np.mean(d2)
     # calculate the effect size
     if math.isnan(s) or s == 0:
-        return 0
+        return -1
     return (int(1000 * np.abs((u1 - u2)) / s)) / 1000
 
 

{nkululeko-0.65.4.dist-info → nkululeko-0.65.5.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: nkululeko
-Version: 0.65.4
+Version: 0.65.5
 Summary: Machine learning audio prediction experiments based on templates
 Home-page: https://github.com/felixbur/nkululeko
 Author: Felix Burkhardt
@@ -255,6 +255,10 @@ Nkululeko can be used under the [MIT license](https://choosealicense.com/license
 Changelog
 =========
 
+Version 0.65.5
+--------------
+* added fill_na in plot effect size
+
 Version 0.65.4
 --------------
 * added datasets to distribution

{nkululeko-0.65.4.dist-info → nkululeko-0.65.5.dist-info}/RECORD

@@ -2,7 +2,7 @@ nkululeko/__init__.py,sha256=62f8HiEzJ8rG2QlTFJXUCMpvuH3fKI33DoJSj33mscc,63
 nkululeko/augment.py,sha256=paq-vEf02XyaPsLjnCbDJbuZind6M6mm0NWAnK5_PKU,1751
 nkululeko/balancer.py,sha256=64ftZN68sMDfkvuovCDHpAHmSJgCO6Kdk9bwmpSisec,12
 nkululeko/cacheddataset.py,sha256=lIJ6hUo5LoxSrzXtWV8mzwO7wRtUETWnOQ4ws2XfL1E,969
-nkululeko/constants.py,sha256=GQt6bohawLWy5SrHljBXYeG_EnN-Xpz1J3KJwSsP5rA,36
+nkululeko/constants.py,sha256=KGYcdgRK9DOOWiYr-901PUaOgmccfRuUhfuYAEyFvZM,36
 nkululeko/demo.py,sha256=1JFayJBUqOwj8fDtNF6siuB_5aG6dkb_TeIFPhYv1YI,1858
 nkululeko/demo_predictor.py,sha256=f3tghu3KxrLFPSrMMqT3E_Owy8alAuHEbkoZuahikEE,2310
 nkululeko/experiment.py,sha256=fV-TdDPlFhS8DdALuzme0n9-3HnGwi_GxiTak3u_ZAY,24779
@@ -14,7 +14,7 @@ nkululeko/filter_data.py,sha256=LD46OLYfA6UuLvFgaA1LvCVSqmi6JXN2xd_fTZdr-ag,7029
 nkululeko/glob_conf.py,sha256=KOsmB2_9AVoKNyhtCkaamj-ZYCme6-NjTYF-4wlLgOY,241
 nkululeko/modelrunner.py,sha256=NYdV4z9TKhtC9LGhOxXa7aBC2AxRjnFJ42Ah01rsbqg,6025
 nkululeko/nkululeko.py,sha256=SVOY3CPvlmG-16kqV8YOvR2HYCgHkaiVo3GBiwu38W0,1681
-nkululeko/plots.py,sha256=p2J9dOHJxbo0_SSh_TtKBLxD5e96DpQ_TmUwn8GDTHo,12714
+nkululeko/plots.py,sha256=wwUvHIlpP6wYlukYNWtgqhxh6avqo_okslNgoT4S6u0,13023
 nkululeko/predict.py,sha256=3ei4wn2by0p9Vkv7cllMcszmEjSM2vX0T6x_5rlgT28,1851
 nkululeko/reporter.py,sha256=359aeQWt0ZGLseaJnOfafYG8BrwumiM2Q58DWiaoyWQ,10177
 nkululeko/resample.py,sha256=NDZLIhmGPcxSZwzIZul9oeNfbaHfAmzjTvRWs6isIr4,2120
@@ -90,9 +90,9 @@ nkululeko/segmenting/seg_inaspeechsegmenter.py,sha256=pmLHuXsaqvcdYxB4PSW9l1mbQW
 nkululeko/segmenting/seg_silero.py,sha256=bbLQxUste1lKEwNRHG4wOTCaFMevNt8TOe2DfmLtu5w,3306
 nkululeko/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nkululeko/utils/files.py,sha256=82EsGvTN85lDdSzetm1ZHTVOUm0AcfQhTeurwsfHN_Q,3547
-nkululeko/utils/stats.py,sha256=v4SpEa1JDCrh1FLjeDU8WsAWrDFVut505v-b6m400p4,1949
-nkululeko-0.65.4.dist-info/LICENSE,sha256=0zGP5B_W35yAcGfHPS18Q2B8UhvLRY3dQq1MhpsJU_U,1076
-nkululeko-0.65.4.dist-info/METADATA,sha256=-iW87jicd9chw6WwfzbUaQ35kg3GjNOK5X_LMaQQxBM,23391
-nkululeko-0.65.4.dist-info/WHEEL,sha256=yQN5g4mg4AybRjkgi-9yy4iQEFibGQmlz78Pik5Or-A,92
-nkululeko-0.65.4.dist-info/top_level.txt,sha256=DPFNNSHPjUeVKj44dVANAjuVGRCC3MusJ08lc2a8xFA,10
-nkululeko-0.65.4.dist-info/RECORD,,
+nkululeko/utils/stats.py,sha256=nRuZEbHpeRTAcvW8b12ZWi_kDnpC5Ztrmvy0_J621cE,2241
+nkululeko-0.65.5.dist-info/LICENSE,sha256=0zGP5B_W35yAcGfHPS18Q2B8UhvLRY3dQq1MhpsJU_U,1076
+nkululeko-0.65.5.dist-info/METADATA,sha256=y2ttA1LEwXgflc2MLb1krzgq3zazj780wZ3fIWR8fAg,23458
+nkululeko-0.65.5.dist-info/WHEEL,sha256=yQN5g4mg4AybRjkgi-9yy4iQEFibGQmlz78Pik5Or-A,92
+nkululeko-0.65.5.dist-info/top_level.txt,sha256=DPFNNSHPjUeVKj44dVANAjuVGRCC3MusJ08lc2a8xFA,10
+nkululeko-0.65.5.dist-info/RECORD,,