niwrap-freesurfer 0.5.0__py3-none-any.whl → 0.5.2__py3-none-any.whl

niwrap_freesurfer/freesurfer/print_unique_labels_csh.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 PRINT_UNIQUE_LABELS_CSH_METADATA = Metadata(
-    id="e9fb80f03f3d4d6c2fbe65561d9c32f6e16bc580.boutiques",
+    id="61620e17b7f1d9248e212d87048973a57d06b37e.boutiques",
     name="print_unique_labels.csh",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -16,7 +16,10 @@ PRINT_UNIQUE_LABELS_CSH_METADATA = Metadata(
 PrintUniqueLabelsCshParameters = typing.TypedDict('PrintUniqueLabelsCshParameters', {
     "__STYX_TYPE__": typing.Literal["print_unique_labels.csh"],
     "label_volume": InputPathType,
+    "output_file": typing.NotRequired[str | None],
     "list_only": bool,
+    "version": bool,
+    "help": bool,
 })
 
 
@@ -58,20 +61,26 @@ class PrintUniqueLabelsCshOutputs(typing.NamedTuple):
     """
     root: OutputPathType
     """Output root folder. This is the root folder for all outputs."""
-    results_file: OutputPathType
+    results_file: OutputPathType | None
     """Output file with the list of unique labels"""
 
 
 def print_unique_labels_csh_params(
     label_volume: InputPathType,
+    output_file: str | None = None,
     list_only: bool = False,
+    version: bool = False,
+    help_: bool = False,
 ) -> PrintUniqueLabelsCshParameters:
     """
     Build parameters.
     
     Args:
         label_volume: Label volume to be analyzed.
+        output_file: Text file where the results are written.
         list_only: Only list the labels.
+        version: Print version and exit.
+        help_: Print help and exit.
     Returns:
         Parameter dictionary
     """
@@ -79,7 +88,11 @@ def print_unique_labels_csh_params(
         "__STYXTYPE__": "print_unique_labels.csh",
         "label_volume": label_volume,
         "list_only": list_only,
+        "version": version,
+        "help": help_,
     }
+    if output_file is not None:
+        params["output_file"] = output_file
     return params
 
 
@@ -102,8 +115,17 @@ def print_unique_labels_csh_cargs(
         "--vol",
         execution.input_file(params.get("label_volume"))
     ])
+    if params.get("output_file") is not None:
+        cargs.extend([
+            "--out",
+            params.get("output_file")
+        ])
     if params.get("list_only"):
         cargs.append("--list")
+    if params.get("version"):
+        cargs.append("--version")
+    if params.get("help"):
+        cargs.append("--help")
     return cargs
 
 
@@ -122,7 +144,7 @@ def print_unique_labels_csh_outputs(
     """
     ret = PrintUniqueLabelsCshOutputs(
         root=execution.output_file("."),
-        results_file=execution.output_file("[OUTPUT_FILE]"),
+        results_file=execution.output_file(params.get("output_file")) if (params.get("output_file") is not None) else None,
     )
     return ret
 
@@ -153,7 +175,10 @@ def print_unique_labels_csh_execute(
 
 def print_unique_labels_csh(
     label_volume: InputPathType,
+    output_file: str | None = None,
     list_only: bool = False,
+    version: bool = False,
+    help_: bool = False,
     runner: Runner | None = None,
 ) -> PrintUniqueLabelsCshOutputs:
     """
@@ -165,7 +190,10 @@ def print_unique_labels_csh(
     
     Args:
         label_volume: Label volume to be analyzed.
+        output_file: Text file where the results are written.
         list_only: Only list the labels.
+        version: Print version and exit.
+        help_: Print help and exit.
         runner: Command runner.
     Returns:
         NamedTuple of outputs (described in `PrintUniqueLabelsCshOutputs`).
@@ -174,7 +202,10 @@ def print_unique_labels_csh(
     execution = runner.start_execution(PRINT_UNIQUE_LABELS_CSH_METADATA)
     params = print_unique_labels_csh_params(
         label_volume=label_volume,
+        output_file=output_file,
         list_only=list_only,
+        version=version,
+        help_=help_,
     )
     return print_unique_labels_csh_execute(params, execution)
 

niwrap_freesurfer/freesurfer/rbbr.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 RBBR_METADATA = Metadata(
-    id="6f8461b7fae6d16cb41c5377c9a0a117f94c76da.boutiques",
+    id="5e244d64ac10cdbe8cb73d1d3628ed3768d60a04.boutiques",
     name="rbbr",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -17,7 +17,11 @@ RbbrParameters = typing.TypedDict('RbbrParameters', {
     "__STYX_TYPE__": typing.Literal["rbbr"],
     "subject": typing.NotRequired[str | None],
     "moving_image": str,
+    "t1_contrast": bool,
     "t2_contrast": bool,
+    "init_reg": bool,
+    "init_spm": bool,
+    "init_fsl": bool,
     "init_header": bool,
     "cost_threshold": typing.NotRequired[float | None],
     "gtm_synthesize": typing.NotRequired[str | None],
@@ -85,7 +89,11 @@ class RbbrOutputs(typing.NamedTuple):
 def rbbr_params(
     moving_image: str,
     subject: str | None = None,
+    t1_contrast: bool = False,
     t2_contrast: bool = False,
+    init_reg: bool = False,
+    init_spm: bool = False,
+    init_fsl: bool = False,
     init_header: bool = False,
     cost_threshold: float | None = None,
     gtm_synthesize: str | None = None,
@@ -108,7 +116,11 @@ def rbbr_params(
     Args:
         moving_image: Input moving image.
         subject: FreeSurfer subject (not needed with --init-reg).
+        t1_contrast: Use T1 tissue contrast.
         t2_contrast: Use T2 tissue contrast.
+        init_reg: Initialize registration.
+        init_spm: Initialize with SPM.
+        init_fsl: Initialize with FSL.
         init_header: Initialize using header.
         cost_threshold: Cost threshold to define outlier.
         gtm_synthesize: Use GTM to synthesize.
@@ -130,7 +142,11 @@ def rbbr_params(
     params = {
         "__STYXTYPE__": "rbbr",
         "moving_image": moving_image,
+        "t1_contrast": t1_contrast,
         "t2_contrast": t2_contrast,
+        "init_reg": init_reg,
+        "init_spm": init_spm,
+        "init_fsl": init_fsl,
         "init_header": init_header,
         "tt_reduce": tt_reduce,
         "left_hemi": left_hemi,
@@ -186,8 +202,16 @@ def rbbr_cargs(
         "--mov",
         params.get("moving_image")
     ])
+    if params.get("t1_contrast"):
+        cargs.append("--t1")
     if params.get("t2_contrast"):
         cargs.append("--t2")
+    if params.get("init_reg"):
+        cargs.append("--init-reg")
+    if params.get("init_spm"):
+        cargs.append("--init-spm")
+    if params.get("init_fsl"):
+        cargs.append("--init-fsl")
     if params.get("init_header"):
         cargs.append("--init-header")
     if params.get("cost_threshold") is not None:
@@ -300,7 +324,11 @@ def rbbr_execute(
 def rbbr(
     moving_image: str,
     subject: str | None = None,
+    t1_contrast: bool = False,
     t2_contrast: bool = False,
+    init_reg: bool = False,
+    init_spm: bool = False,
+    init_fsl: bool = False,
     init_header: bool = False,
     cost_threshold: float | None = None,
     gtm_synthesize: str | None = None,
@@ -328,7 +356,11 @@ def rbbr(
     Args:
         moving_image: Input moving image.
         subject: FreeSurfer subject (not needed with --init-reg).
+        t1_contrast: Use T1 tissue contrast.
         t2_contrast: Use T2 tissue contrast.
+        init_reg: Initialize registration.
+        init_spm: Initialize with SPM.
+        init_fsl: Initialize with FSL.
         init_header: Initialize using header.
         cost_threshold: Cost threshold to define outlier.
         gtm_synthesize: Use GTM to synthesize.
@@ -353,7 +385,11 @@ def rbbr(
     params = rbbr_params(
         subject=subject,
         moving_image=moving_image,
+        t1_contrast=t1_contrast,
         t2_contrast=t2_contrast,
+        init_reg=init_reg,
+        init_spm=init_spm,
+        init_fsl=init_fsl,
         init_header=init_header,
         cost_threshold=cost_threshold,
         gtm_synthesize=gtm_synthesize,

niwrap_freesurfer/freesurfer/rca_base_init.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 RCA_BASE_INIT_METADATA = Metadata(
-    id="40035e4c6889519a8062b007d6e932c3e18ff078.boutiques",
+    id="3c8d3ad6bcb4fc42684b1829ed14e08e22b13cd8.boutiques",
     name="rca-base-init",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -101,10 +101,11 @@ def rca_base_init_cargs(
         Command-line arguments.
     """
     cargs = []
+    cargs.append("rca-base-init")
     if params.get("log_file") is not None:
         cargs.extend([
             "-init",
-            "rca-base" + params.get("log_file")
+            params.get("log_file")
         ])
     if params.get("status_file") is not None:
         cargs.append(params.get("status_file"))

niwrap_freesurfer/freesurfer/rca_config.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 RCA_CONFIG_METADATA = Metadata(
-    id="51c0aae9a34d0b770555399cc01f066ce00769c7.boutiques",
+    id="46eae30104e8ee7e67f818e2a5df2c8456668ef9.boutiques",
     name="rca-config",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -104,9 +104,10 @@ def rca_config_cargs(
         Command-line arguments.
     """
     cargs = []
+    cargs.append("rca-config")
     cargs.extend([
         "-config",
-        "recon" + execution.input_file(params.get("source_config"))
+        execution.input_file(params.get("source_config"))
     ])
     cargs.append(execution.input_file(params.get("updated_config")))
     cargs.append(execution.input_file(params.get("unknown_args_file")))

niwrap_freesurfer/freesurfer/rca_config2csh.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 RCA_CONFIG2CSH_METADATA = Metadata(
-    id="a6974f7a84f9b447ffa3652155f3daff457ba308.boutiques",
+    id="7da3f443ce243dae4e35d8db7f6e15691dc59ca6.boutiques",
     name="rca-config2csh",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -90,9 +90,10 @@ def rca_config2csh_cargs(
         Command-line arguments.
     """
     cargs = []
+    cargs.append("rca-config2csh")
     cargs.extend([
         "-config2csh",
-        "rca" + execution.input_file(params.get("configfile"))
+        execution.input_file(params.get("configfile"))
     ])
     return cargs
 

niwrap_freesurfer/freesurfer/recon_all.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 RECON_ALL_METADATA = Metadata(
-    id="de72948bacd270ce7d872b3cb30e555b07de540c.boutiques",
+    id="1798c3fdbe8f172aa9c2b07b5d9c964e492cfd06.boutiques",
     name="recon-all",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -16,6 +16,14 @@ RECON_ALL_METADATA = Metadata(
 ReconAllParameters = typing.TypedDict('ReconAllParameters', {
     "__STYX_TYPE__": typing.Literal["recon-all"],
     "subjid": str,
+    "all_flag": bool,
+    "autorecon_all_flag": bool,
+    "autorecon1_flag": bool,
+    "autorecon2_flag": bool,
+    "autorecon2_cp_flag": bool,
+    "autorecon2_wm_flag": bool,
+    "autorecon2_inflate1_flag": bool,
+    "autorecon2_perhemi_flag": bool,
     "autorecon3_flag": bool,
     "hemi": typing.NotRequired[str | None],
     "pons_crs": typing.NotRequired[list[float] | None],
@@ -125,6 +133,14 @@ class ReconAllOutputs(typing.NamedTuple):
 
 def recon_all_params(
     subjid: str,
+    all_flag: bool = False,
+    autorecon_all_flag: bool = False,
+    autorecon1_flag: bool = False,
+    autorecon2_flag: bool = False,
+    autorecon2_cp_flag: bool = False,
+    autorecon2_wm_flag: bool = False,
+    autorecon2_inflate1_flag: bool = False,
+    autorecon2_perhemi_flag: bool = False,
     autorecon3_flag: bool = False,
     hemi: str | None = None,
     pons_crs: list[float] | None = None,
@@ -191,6 +207,15 @@ def recon_all_params(
     
     Args:
         subjid: Subject ID for the FreeSurfer analysis.
+        all_flag: Performs all stages of cortical reconstruction.
+        autorecon_all_flag: Same as -all.
+        autorecon1_flag: Process stages 1-5.
+        autorecon2_flag: Process stages 6-23.
+        autorecon2_cp_flag: Process stages 12-23.
+        autorecon2_wm_flag: Process stages 15-23.
+        autorecon2_inflate1_flag: Process stages 6-18.
+        autorecon2_perhemi_flag: Tessellation, Smooth1, Inflate1, Qsphere, Fix,\
+            Smooth2, Inflate2, Finalsurf, Ribbon.
         autorecon3_flag: Process stages 24-34.
         hemi: Specify hemisphere ('lh' or 'rh').
         pons_crs: Specify CRS for pons during fill operation.
@@ -264,6 +289,14 @@ def recon_all_params(
     params = {
         "__STYXTYPE__": "recon-all",
         "subjid": subjid,
+        "all_flag": all_flag,
+        "autorecon_all_flag": autorecon_all_flag,
+        "autorecon1_flag": autorecon1_flag,
+        "autorecon2_flag": autorecon2_flag,
+        "autorecon2_cp_flag": autorecon2_cp_flag,
+        "autorecon2_wm_flag": autorecon2_wm_flag,
+        "autorecon2_inflate1_flag": autorecon2_inflate1_flag,
+        "autorecon2_perhemi_flag": autorecon2_perhemi_flag,
         "autorecon3_flag": autorecon3_flag,
         "nofill": nofill,
         "wsless": wsless,
@@ -377,6 +410,22 @@ def recon_all_cargs(
         "-subjid",
         params.get("subjid")
     ])
+    if params.get("all_flag"):
+        cargs.append("-all")
+    if params.get("autorecon_all_flag"):
+        cargs.append("-autorecon-all")
+    if params.get("autorecon1_flag"):
+        cargs.append("-autorecon1")
+    if params.get("autorecon2_flag"):
+        cargs.append("-autorecon2")
+    if params.get("autorecon2_cp_flag"):
+        cargs.append("-autorecon2-cp")
+    if params.get("autorecon2_wm_flag"):
+        cargs.append("-autorecon2-wm")
+    if params.get("autorecon2_inflate1_flag"):
+        cargs.append("-autorecon2-inflate1")
+    if params.get("autorecon2_perhemi_flag"):
+        cargs.append("-autorecon2-perhemi")
     if params.get("autorecon3_flag"):
         cargs.append("-autorecon3")
     if params.get("hemi") is not None:
@@ -637,6 +686,14 @@ def recon_all_execute(
 
 def recon_all(
     subjid: str,
+    all_flag: bool = False,
+    autorecon_all_flag: bool = False,
+    autorecon1_flag: bool = False,
+    autorecon2_flag: bool = False,
+    autorecon2_cp_flag: bool = False,
+    autorecon2_wm_flag: bool = False,
+    autorecon2_inflate1_flag: bool = False,
+    autorecon2_perhemi_flag: bool = False,
     autorecon3_flag: bool = False,
     hemi: str | None = None,
     pons_crs: list[float] | None = None,
@@ -708,6 +765,15 @@ def recon_all(
     
     Args:
         subjid: Subject ID for the FreeSurfer analysis.
+        all_flag: Performs all stages of cortical reconstruction.
+        autorecon_all_flag: Same as -all.
+        autorecon1_flag: Process stages 1-5.
+        autorecon2_flag: Process stages 6-23.
+        autorecon2_cp_flag: Process stages 12-23.
+        autorecon2_wm_flag: Process stages 15-23.
+        autorecon2_inflate1_flag: Process stages 6-18.
+        autorecon2_perhemi_flag: Tessellation, Smooth1, Inflate1, Qsphere, Fix,\
+            Smooth2, Inflate2, Finalsurf, Ribbon.
         autorecon3_flag: Process stages 24-34.
         hemi: Specify hemisphere ('lh' or 'rh').
         pons_crs: Specify CRS for pons during fill operation.
@@ -783,6 +849,14 @@ def recon_all(
     execution = runner.start_execution(RECON_ALL_METADATA)
     params = recon_all_params(
         subjid=subjid,
+        all_flag=all_flag,
+        autorecon_all_flag=autorecon_all_flag,
+        autorecon1_flag=autorecon1_flag,
+        autorecon2_flag=autorecon2_flag,
+        autorecon2_cp_flag=autorecon2_cp_flag,
+        autorecon2_wm_flag=autorecon2_wm_flag,
+        autorecon2_inflate1_flag=autorecon2_inflate1_flag,
+        autorecon2_perhemi_flag=autorecon2_perhemi_flag,
         autorecon3_flag=autorecon3_flag,
         hemi=hemi,
         pons_crs=pons_crs,

niwrap_freesurfer/freesurfer/register_elderly_subject.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 REGISTER_ELDERLY_SUBJECT_METADATA = Metadata(
-    id="537220baa60ce5febcf14be16d4b791c3cbbebb9.boutiques",
+    id="6846052f6f1ffde9ddad0703126f73b72a6cd671.boutiques",
     name="register_elderly_subject",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -117,7 +117,7 @@ def register_elderly_subject_cargs(
         Command-line arguments.
     """
     cargs = []
-    cargs.append("mri_em_register")
+    cargs.append("register_elderly_subject")
     if params.get("sampling_percentage") is not None:
         cargs.extend([
             "-p",

niwrap_freesurfer/freesurfer/reinflate_subject_lh.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 REINFLATE_SUBJECT_LH_METADATA = Metadata(
-    id="3a29a9cc35621246bc04494a51e4c6898d34911c.boutiques",
+    id="02ce6c00d84a61d80dd02bb72d0ef33c7f1446d6.boutiques",
     name="reinflate_subject-lh",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -93,9 +93,10 @@ def reinflate_subject_lh_cargs(
         Command-line arguments.
     """
     cargs = []
+    cargs.append("reinflate_subject-lh")
     cargs.extend([
         "-lh",
-        "reinflate_subject" + params.get("subject_id")
+        params.get("subject_id")
     ])
     return cargs
 

niwrap_freesurfer/freesurfer/reinflate_subject_rh.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 REINFLATE_SUBJECT_RH_METADATA = Metadata(
-    id="46c17d80d09536f705ed323c939acc704434405c.boutiques",
+    id="9cd92db80be80b0a27f77251253c9b44f8012411.boutiques",
     name="reinflate_subject-rh",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -96,9 +96,10 @@ def reinflate_subject_rh_cargs(
         Command-line arguments.
     """
     cargs = []
+    cargs.append("reinflate_subject-rh")
     cargs.extend([
         "-rh",
-        "reinflate_subject" + params.get("subject_dir")
+        params.get("subject_dir")
     ])
     if params.get("additional_options") is not None:
         cargs.append(params.get("additional_options"))

niwrap_freesurfer/freesurfer/renormalize_subject_keep_editting.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 RENORMALIZE_SUBJECT_KEEP_EDITTING_METADATA = Metadata(
-    id="d1c64f0c85672d74bb2cb15852e56662e6d58c32.boutiques",
+    id="f922d68383395cff18ea3f5fe5e68eae32a7b22e.boutiques",
     name="renormalize_subject_keep_editting",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -15,6 +15,7 @@ RENORMALIZE_SUBJECT_KEEP_EDITTING_METADATA = Metadata(
 
 RenormalizeSubjectKeepEdittingParameters = typing.TypedDict('RenormalizeSubjectKeepEdittingParameters', {
     "__STYX_TYPE__": typing.Literal["renormalize_subject_keep_editting"],
+    "placeholder_input": typing.NotRequired[str | None],
 })
 
 
@@ -61,17 +62,22 @@ class RenormalizeSubjectKeepEdittingOutputs(typing.NamedTuple):
 
 
 def renormalize_subject_keep_editting_params(
+    placeholder_input: str | None = None,
 ) -> RenormalizeSubjectKeepEdittingParameters:
     """
     Build parameters.
     
     Args:
+        placeholder_input: Placeholder input since tool details are not\
+            available.
     Returns:
         Parameter dictionary
     """
     params = {
         "__STYXTYPE__": "renormalize_subject_keep_editting",
     }
+    if placeholder_input is not None:
+        params["placeholder_input"] = placeholder_input
     return params
 
 
@@ -90,6 +96,8 @@ def renormalize_subject_keep_editting_cargs(
     """
     cargs = []
     cargs.append("renormalize_subject_keep_editting")
+    if params.get("placeholder_input") is not None:
+        cargs.append(params.get("placeholder_input"))
     return cargs
 
 
@@ -139,6 +147,7 @@ def renormalize_subject_keep_editting_execute(
 
 
 def renormalize_subject_keep_editting(
+    placeholder_input: str | None = None,
     runner: Runner | None = None,
 ) -> RenormalizeSubjectKeepEdittingOutputs:
     """
@@ -150,6 +159,8 @@ def renormalize_subject_keep_editting(
     URL: https://github.com/freesurfer/freesurfer
     
     Args:
+        placeholder_input: Placeholder input since tool details are not\
+            available.
         runner: Command runner.
     Returns:
         NamedTuple of outputs (described in `RenormalizeSubjectKeepEdittingOutputs`).
@@ -157,6 +168,7 @@ def renormalize_subject_keep_editting(
     runner = runner or get_global_runner()
     execution = runner.start_execution(RENORMALIZE_SUBJECT_KEEP_EDITTING_METADATA)
     params = renormalize_subject_keep_editting_params(
+        placeholder_input=placeholder_input,
     )
     return renormalize_subject_keep_editting_execute(params, execution)
 

niwrap_freesurfer/freesurfer/rtview.py

@@ -6,7 +6,7 @@ import pathlib
 from styxdefs import *
 
 RTVIEW_METADATA = Metadata(
-    id="bbfc6a7778d4c734c212389406f89e8b0c6cbe09.boutiques",
+    id="d1062fc3fcb7c8d781138ed45f8feb4a04671369.boutiques",
     name="rtview",
     package="freesurfer",
     container_image_tag="freesurfer/freesurfer:7.4.1",
@@ -16,7 +16,10 @@ RTVIEW_METADATA = Metadata(
 RtviewParameters = typing.TypedDict('RtviewParameters', {
     "__STYX_TYPE__": typing.Literal["rtview"],
     "subject": typing.NotRequired[str | None],
+    "hemi": typing.NotRequired[str | None],
+    "left_hemi": bool,
     "right_hemi": bool,
+    "eccen": bool,
     "polar": bool,
     "real_file": typing.NotRequired[InputPathType | None],
     "imag_file": typing.NotRequired[InputPathType | None],
@@ -70,7 +73,10 @@ class RtviewOutputs(typing.NamedTuple):
 
 def rtview_params(
     subject: str | None = None,
+    hemi: str | None = None,
+    left_hemi: bool = False,
     right_hemi: bool = False,
+    eccen: bool = False,
     polar: bool = False,
     real_file: InputPathType | None = None,
     imag_file: InputPathType | None = None,
@@ -86,7 +92,11 @@ def rtview_params(
     
     Args:
         subject: Subject to use as display.
+        hemi: Hemisphere to display: 'lh' for left hemisphere or 'rh' for right\
+            hemisphere.
+        left_hemi: Display left hemisphere.
         right_hemi: Display right hemisphere.
+        eccen: Display eccentricity data.
         polar: Display polar data.
         real_file: File containing real (cosine) values.
         imag_file: File containing imaginary (sine) values.
@@ -101,13 +111,17 @@ def rtview_params(
     """
     params = {
         "__STYXTYPE__": "rtview",
+        "left_hemi": left_hemi,
         "right_hemi": right_hemi,
+        "eccen": eccen,
         "polar": polar,
         "flat_display": flat_display,
         "no_cleanup": no_cleanup,
     }
     if subject is not None:
         params["subject"] = subject
+    if hemi is not None:
+        params["hemi"] = hemi
     if real_file is not None:
         params["real_file"] = real_file
     if imag_file is not None:
@@ -143,8 +157,17 @@ def rtview_cargs(
             "--s",
             params.get("subject")
         ])
+    if params.get("hemi") is not None:
+        cargs.extend([
+            "--hemi",
+            params.get("hemi")
+        ])
+    if params.get("left_hemi"):
+        cargs.append("--lh")
     if params.get("right_hemi"):
         cargs.append("--rh")
+    if params.get("eccen"):
+        cargs.append("--eccen")
     if params.get("polar"):
         cargs.append("--polar")
     if params.get("real_file") is not None:
@@ -230,7 +253,10 @@ def rtview_execute(
 
 def rtview(
     subject: str | None = None,
+    hemi: str | None = None,
+    left_hemi: bool = False,
     right_hemi: bool = False,
+    eccen: bool = False,
     polar: bool = False,
     real_file: InputPathType | None = None,
     imag_file: InputPathType | None = None,
@@ -252,7 +278,11 @@ def rtview(
     
     Args:
         subject: Subject to use as display.
+        hemi: Hemisphere to display: 'lh' for left hemisphere or 'rh' for right\
+            hemisphere.
+        left_hemi: Display left hemisphere.
         right_hemi: Display right hemisphere.
+        eccen: Display eccentricity data.
         polar: Display polar data.
         real_file: File containing real (cosine) values.
         imag_file: File containing imaginary (sine) values.
@@ -270,7 +300,10 @@ def rtview(
     execution = runner.start_execution(RTVIEW_METADATA)
     params = rtview_params(
         subject=subject,
+        hemi=hemi,
+        left_hemi=left_hemi,
         right_hemi=right_hemi,
+        eccen=eccen,
         polar=polar,
         real_file=real_file,
         imag_file=imag_file,