niwrap-afni 0.5.3__py3-none-any.whl → 0.6.1__py3-none-any.whl

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Files changed (538) hide show
  1. niwrap_afni/afni/abids_json_info_py.py +1 -1
  2. niwrap_afni/afni/abids_json_tool_py.py +1 -1
  3. niwrap_afni/afni/abids_tool.py +1 -1
  4. niwrap_afni/afni/adjunct_apqc_tsnr_general.py +1 -1
  5. niwrap_afni/afni/adjunct_aw_tableize_roi_info_py.py +1 -1
  6. niwrap_afni/afni/adjunct_calc_mont_dims_py.py +1 -1
  7. niwrap_afni/afni/adjunct_combine_str_py.py +1 -1
  8. niwrap_afni/afni/adjunct_make_script_and_rst_py.py +1 -1
  9. niwrap_afni/afni/adjunct_suma_fs_mask_and_qc.py +1 -1
  10. niwrap_afni/afni/adjunct_suma_fs_roi_info.py +1 -1
  11. niwrap_afni/afni/adjunct_tort_plot_dp_align.py +1 -1
  12. niwrap_afni/afni/adwarp.py +1 -1
  13. niwrap_afni/afni/afni.py +1 -1
  14. niwrap_afni/afni/afni_batch_r.py +1 -1
  15. niwrap_afni/afni/afni_history.py +1 -1
  16. niwrap_afni/afni/afni_open.py +1 -1
  17. niwrap_afni/afni/afni_proc_py.py +1 -1
  18. niwrap_afni/afni/afni_system_check_py.py +1 -1
  19. niwrap_afni/afni/aiv.py +1 -1
  20. niwrap_afni/afni/align_epi_anat.py +1 -1
  21. niwrap_afni/afni/analyze_trace.py +1 -1
  22. niwrap_afni/afni/ap_run_simple_rest.py +1 -1
  23. niwrap_afni/afni/apqc_make_tcsh_py.py +1 -1
  24. niwrap_afni/afni/apsearch.py +1 -1
  25. niwrap_afni/afni/auto_warp_py.py +1 -1
  26. niwrap_afni/afni/bayes_view.py +1 -1
  27. niwrap_afni/afni/bayesian_group_ana_py.py +1 -1
  28. niwrap_afni/afni/brain_skin.py +1 -1
  29. niwrap_afni/afni/build_afni_py.py +1 -1
  30. niwrap_afni/afni/cat_matvec.py +1 -1
  31. niwrap_afni/afni/cifti_tool.py +1 -1
  32. niwrap_afni/afni/cjpeg.py +1 -1
  33. niwrap_afni/afni/clust_exp_hist_table_py.py +1 -1
  34. niwrap_afni/afni/clust_exp_stat_parse_py.py +1 -1
  35. niwrap_afni/afni/column_cat.py +1 -1
  36. niwrap_afni/afni/compare_surfaces.py +1 -1
  37. niwrap_afni/afni/convert_cdiflist_to_grads.py +1 -1
  38. niwrap_afni/afni/convert_dset.py +1 -1
  39. niwrap_afni/afni/convert_surface.py +1 -1
  40. niwrap_afni/afni/convex_hull.py +1 -1
  41. niwrap_afni/afni/count.py +1 -1
  42. niwrap_afni/afni/create_icosahedron.py +1 -1
  43. niwrap_afni/afni/dcm2niix_afni.py +1 -1
  44. niwrap_afni/afni/dicom_hdr.py +1 -1
  45. niwrap_afni/afni/dicom_hinfo.py +1 -1
  46. niwrap_afni/afni/dicom_to_raw.py +1 -1
  47. niwrap_afni/afni/dimon.py +1 -1
  48. niwrap_afni/afni/djpeg.py +1 -1
  49. niwrap_afni/afni/drive_suma.py +1 -1
  50. niwrap_afni/afni/dsetstat2p.py +1 -1
  51. niwrap_afni/afni/dtistudio_fiberto_segments.py +1 -1
  52. niwrap_afni/afni/epi_b0_correct.py +1 -1
  53. niwrap_afni/afni/examine_xmat.py +1 -1
  54. niwrap_afni/afni/fat_mat2d_plot_py.py +1 -1
  55. niwrap_afni/afni/fat_mat_sel_py.py +1 -1
  56. niwrap_afni/afni/fat_mat_tableize.py +1 -1
  57. niwrap_afni/afni/fat_mvm_gridconv_py.py +1 -1
  58. niwrap_afni/afni/fat_mvm_prep.py +1 -1
  59. niwrap_afni/afni/fat_mvm_scripter_py.py +1 -1
  60. niwrap_afni/afni/fat_proc_align_anat_pair.py +1 -1
  61. niwrap_afni/afni/fat_proc_axialize_anat.py +1 -1
  62. niwrap_afni/afni/fat_proc_connec_vis.py +1 -1
  63. niwrap_afni/afni/fat_proc_convert_dcm_anat.py +1 -1
  64. niwrap_afni/afni/fat_proc_convert_dcm_dwis.py +1 -1
  65. niwrap_afni/afni/fat_proc_decmap.py +1 -1
  66. niwrap_afni/afni/fat_proc_dwi_to_dt.py +1 -1
  67. niwrap_afni/afni/fat_proc_filter_dwis.py +1 -1
  68. niwrap_afni/afni/fat_proc_imit2w_from_t1w.py +1 -1
  69. niwrap_afni/afni/fat_proc_map_to_dti.py +1 -1
  70. niwrap_afni/afni/fat_proc_select_vols.py +1 -1
  71. niwrap_afni/afni/fat_roi_row.py +1 -1
  72. niwrap_afni/afni/fatcat_matplot.py +1 -1
  73. niwrap_afni/afni/fdrval.py +1 -1
  74. niwrap_afni/afni/fftest.py +1 -1
  75. niwrap_afni/afni/file_tool.py +1 -1
  76. niwrap_afni/afni/fim2.py +1 -1
  77. niwrap_afni/afni/find_variance_lines.py +1 -1
  78. niwrap_afni/afni/float_scan.py +1 -1
  79. niwrap_afni/afni/from3d.py +1 -1
  80. niwrap_afni/afni/fsread_annot.py +1 -1
  81. niwrap_afni/afni/gen_group_command.py +1 -1
  82. niwrap_afni/afni/gen_ss_review_scripts.py +1 -1
  83. niwrap_afni/afni/gen_ss_review_table_py.py +1 -1
  84. niwrap_afni/afni/gifti_tool.py +1 -1
  85. niwrap_afni/afni/gltsymtest.py +1 -1
  86. niwrap_afni/afni/help_format.py +1 -1
  87. niwrap_afni/afni/im2niml.py +1 -1
  88. niwrap_afni/afni/images_equal.py +1 -1
  89. niwrap_afni/afni/imand.py +1 -1
  90. niwrap_afni/afni/imaver.py +1 -1
  91. niwrap_afni/afni/imcalc.py +1 -1
  92. niwrap_afni/afni/imcat.py +1 -1
  93. niwrap_afni/afni/imcutup.py +1 -1
  94. niwrap_afni/afni/imdump.py +1 -1
  95. niwrap_afni/afni/immask.py +1 -1
  96. niwrap_afni/afni/imreg.py +1 -1
  97. niwrap_afni/afni/imrotate.py +1 -1
  98. niwrap_afni/afni/imstack.py +1 -1
  99. niwrap_afni/afni/imstat.py +1 -1
  100. niwrap_afni/afni/imupsam.py +1 -1
  101. niwrap_afni/afni/init_user_dotfiles_py.py +1 -1
  102. niwrap_afni/afni/inspec.py +1 -1
  103. niwrap_afni/afni/iso_surface.py +1 -1
  104. niwrap_afni/afni/make_color_map.py +1 -1
  105. niwrap_afni/afni/make_pq_script_py.py +1 -1
  106. niwrap_afni/afni/make_random_timing_py.py +1 -1
  107. niwrap_afni/afni/make_stim_times_py.py +1 -1
  108. niwrap_afni/afni/map_icosahedron.py +1 -1
  109. niwrap_afni/afni/map_track_id.py +1 -1
  110. niwrap_afni/afni/mba.py +1 -1
  111. niwrap_afni/afni/meica_py.py +1 -1
  112. niwrap_afni/afni/myget.py +1 -1
  113. niwrap_afni/afni/neuro_deconvolve_py.py +1 -1
  114. niwrap_afni/afni/nicat.py +1 -1
  115. niwrap_afni/afni/niccc.py +1 -1
  116. niwrap_afni/afni/nifti_tool.py +1 -1
  117. niwrap_afni/afni/niml_feedme.py +1 -1
  118. niwrap_afni/afni/nsize.py +1 -1
  119. niwrap_afni/afni/p2dsetstat.py +1 -1
  120. niwrap_afni/afni/parse_fs_lt_log_py.py +1 -1
  121. niwrap_afni/afni/plugout_drive.py +1 -1
  122. niwrap_afni/afni/plugout_ijk.py +1 -1
  123. niwrap_afni/afni/plugout_tt.py +1 -1
  124. niwrap_afni/afni/plugout_tta.py +1 -1
  125. niwrap_afni/afni/pta.py +1 -1
  126. niwrap_afni/afni/qdelaunay.py +1 -1
  127. niwrap_afni/afni/qhull.py +1 -1
  128. niwrap_afni/afni/quick_alpha_vals_py.py +1 -1
  129. niwrap_afni/afni/quickspec.py +1 -1
  130. niwrap_afni/afni/quickspec_sl.py +1 -1
  131. niwrap_afni/afni/quotize.py +1 -1
  132. niwrap_afni/afni/r_pkgs_install.py +1 -1
  133. niwrap_afni/afni/rba.py +1 -1
  134. niwrap_afni/afni/rbox.py +1 -14
  135. niwrap_afni/afni/read_matlab_files_py.py +1 -1
  136. niwrap_afni/afni/realtime_receiver.py +1 -1
  137. niwrap_afni/afni/retro_ts_py.py +1 -1
  138. niwrap_afni/afni/rmz.py +1 -1
  139. niwrap_afni/afni/roi2dataset.py +1 -1
  140. niwrap_afni/afni/roigrow.py +1 -1
  141. niwrap_afni/afni/rotcom.py +1 -1
  142. niwrap_afni/afni/rsfgen.py +1 -1
  143. niwrap_afni/afni/rtfeedme.py +1 -1
  144. niwrap_afni/afni/samp_bias.py +1 -1
  145. niwrap_afni/afni/scale_to_map.py +65 -18
  146. niwrap_afni/afni/serial_helper.py +1 -1
  147. niwrap_afni/afni/sfim.py +1 -1
  148. niwrap_afni/afni/slow_surf_clustsim_py.py +1 -1
  149. niwrap_afni/afni/spharm_deco.py +1 -1
  150. niwrap_afni/afni/stimband.py +1 -1
  151. niwrap_afni/afni/strblast.py +1 -1
  152. niwrap_afni/afni/suma_change_spec.py +1 -1
  153. niwrap_afni/afni/suma_glxdino.py +1 -1
  154. niwrap_afni/afni/surf2_vol_coord.py +1 -1
  155. niwrap_afni/afni/surf_clust.py +1 -1
  156. niwrap_afni/afni/surf_dist.py +1 -1
  157. niwrap_afni/afni/surf_dset_info.py +1 -1
  158. niwrap_afni/afni/surf_extrema.py +1 -1
  159. niwrap_afni/afni/surf_fwhm.py +1 -1
  160. niwrap_afni/afni/surf_info.py +1 -1
  161. niwrap_afni/afni/surf_layers.py +1 -1
  162. niwrap_afni/afni/surf_localstat.py +1 -1
  163. niwrap_afni/afni/surf_measures.py +1 -1
  164. niwrap_afni/afni/surf_mesh.py +1 -1
  165. niwrap_afni/afni/surf_patch.py +1 -1
  166. niwrap_afni/afni/surf_qual.py +1 -1
  167. niwrap_afni/afni/surf_retino_map.py +1 -1
  168. niwrap_afni/afni/surf_smooth.py +1 -1
  169. niwrap_afni/afni/surf_to_surf.py +1 -1
  170. niwrap_afni/afni/surface_metrics.py +10 -1
  171. niwrap_afni/afni/tedana_wrapper_py.py +1 -1
  172. niwrap_afni/afni/tfim.py +1 -1
  173. niwrap_afni/afni/timing_tool_py.py +1 -1
  174. niwrap_afni/afni/to3d.py +1 -1
  175. niwrap_afni/afni/trr.py +1 -1
  176. niwrap_afni/afni/uber_align_test_py.py +1 -1
  177. niwrap_afni/afni/uber_skel.py +1 -1
  178. niwrap_afni/afni/uber_subject_py.py +1 -1
  179. niwrap_afni/afni/un_warp_epi_py.py +1 -1
  180. niwrap_afni/afni/uniq_images.py +1 -1
  181. niwrap_afni/afni/v_1d_astrip.py +1 -1
  182. niwrap_afni/afni/v_1d_bandpass.py +1 -1
  183. niwrap_afni/afni/v_1d_bport.py +1 -1
  184. niwrap_afni/afni/v_1d_correlate.py +1 -1
  185. niwrap_afni/afni/v_1d_dw_grad_o_mat__.py +1 -1
  186. niwrap_afni/afni/v_1d_flag_motion.py +1 -1
  187. niwrap_afni/afni/v_1d_marry.py +1 -1
  188. niwrap_afni/afni/v_1d_nlfit.py +1 -1
  189. niwrap_afni/afni/v_1d_rplot.py +1 -1
  190. niwrap_afni/afni/v_1d_sem.py +1 -1
  191. niwrap_afni/afni/v_1d_tool_py.py +1 -1
  192. niwrap_afni/afni/v_1d_tsort.py +1 -1
  193. niwrap_afni/afni/v_1d_upsample.py +1 -1
  194. niwrap_afni/afni/v_1dcat.py +1 -1
  195. niwrap_afni/afni/v_1ddot.py +1 -1
  196. niwrap_afni/afni/v_1deval.py +1 -1
  197. niwrap_afni/afni/v_1dfft.py +1 -1
  198. niwrap_afni/afni/v_1dgen_arma11.py +1 -1
  199. niwrap_afni/afni/v_1dgrayplot.py +1 -1
  200. niwrap_afni/afni/v_1dmatcalc.py +1 -1
  201. niwrap_afni/afni/v_1dnorm.py +1 -1
  202. niwrap_afni/afni/v_1dplot.py +192 -63
  203. niwrap_afni/afni/v_1dplot_py.py +1 -1
  204. niwrap_afni/afni/v_1dsound.py +1 -1
  205. niwrap_afni/afni/v_1dsum.py +1 -1
  206. niwrap_afni/afni/v_1dsvd.py +1 -1
  207. niwrap_afni/afni/v_1dtranspose.py +1 -1
  208. niwrap_afni/afni/v_24swap.py +1 -1
  209. niwrap_afni/afni/v_2d_im_reg.py +1 -1
  210. niwrap_afni/afni/v_2dcat.py +1 -1
  211. niwrap_afni/afni/v_2perm.py +1 -1
  212. niwrap_afni/afni/v_2swap.py +1 -1
  213. niwrap_afni/afni/v_3_droimaker.py +1 -1
  214. niwrap_afni/afni/v_3d_aboverlap.py +1 -1
  215. niwrap_afni/afni/v_3d_acost.py +1 -1
  216. niwrap_afni/afni/v_3d_afnito3_d.py +1 -1
  217. niwrap_afni/afni/v_3d_afnito_analyze.py +1 -1
  218. niwrap_afni/afni/v_3d_afnito_nifti.py +1 -1
  219. niwrap_afni/afni/v_3d_afnito_niml.py +1 -1
  220. niwrap_afni/afni/v_3d_afnito_raw.py +1 -1
  221. niwrap_afni/afni/v_3d_allineate.py +1 -1
  222. niwrap_afni/afni/v_3d_amp_to_rsfc.py +1 -1
  223. niwrap_afni/afni/v_3d_anhist.py +1 -1
  224. niwrap_afni/afni/v_3d_anova.py +1 -1
  225. niwrap_afni/afni/v_3d_anova2.py +1 -1
  226. niwrap_afni/afni/v_3d_anova3.py +143 -25
  227. niwrap_afni/afni/v_3d_attribute.py +1 -1
  228. niwrap_afni/afni/v_3d_auto_tcorrelate.py +1 -1
  229. niwrap_afni/afni/v_3d_autobox.py +1 -1
  230. niwrap_afni/afni/v_3d_automask.py +1 -1
  231. niwrap_afni/afni/v_3d_ball_match.py +1 -1
  232. niwrap_afni/afni/v_3d_bandpass.py +1 -1
  233. niwrap_afni/afni/v_3d_blur_in_mask.py +1 -1
  234. niwrap_afni/afni/v_3d_blur_to_fwhm.py +1 -1
  235. niwrap_afni/afni/v_3d_brain_sync.py +1 -1
  236. niwrap_afni/afni/v_3d_brain_voyagerto_afni.py +1 -1
  237. niwrap_afni/afni/v_3d_brick_stat.py +1 -1
  238. niwrap_afni/afni/v_3d_clip_level.py +1 -1
  239. niwrap_afni/afni/v_3d_clust_count.py +1 -1
  240. niwrap_afni/afni/v_3d_clust_sim.py +1 -1
  241. niwrap_afni/afni/v_3d_clusterize.py +1 -1
  242. niwrap_afni/afni/v_3d_cm.py +1 -1
  243. niwrap_afni/afni/v_3d_compare_affine.py +1 -1
  244. niwrap_afni/afni/v_3d_conformist.py +1 -1
  245. niwrap_afni/afni/v_3d_convolve.py +1 -1
  246. niwrap_afni/afni/v_3d_cruiseto_afni.py +65 -18
  247. niwrap_afni/afni/v_3d_deconvolve.py +1 -1
  248. niwrap_afni/afni/v_3d_degree_centrality.py +1 -1
  249. niwrap_afni/afni/v_3d_depth_map.py +1 -1
  250. niwrap_afni/afni/v_3d_despike.py +1 -1
  251. niwrap_afni/afni/v_3d_detrend.py +1 -1
  252. niwrap_afni/afni/v_3d_dft.py +1 -1
  253. niwrap_afni/afni/v_3d_diff.py +1 -1
  254. niwrap_afni/afni/v_3d_dteig.py +1 -1
  255. niwrap_afni/afni/v_3d_dtto_dwi.py +1 -1
  256. niwrap_afni/afni/v_3d_dtto_noisy_dwi.py +1 -1
  257. niwrap_afni/afni/v_3d_dwito_dt.py +1 -1
  258. niwrap_afni/afni/v_3d_dwuncert.py +1 -1
  259. niwrap_afni/afni/v_3d_ecm.py +1 -1
  260. niwrap_afni/afni/v_3d_edu_01_scale.py +1 -1
  261. niwrap_afni/afni/v_3d_eigs_to_dt.py +1 -1
  262. niwrap_afni/afni/v_3d_empty.py +1 -1
  263. niwrap_afni/afni/v_3d_entropy.py +1 -1
  264. niwrap_afni/afni/v_3d_errts_cormat.py +1 -1
  265. niwrap_afni/afni/v_3d_exchange.py +1 -1
  266. niwrap_afni/afni/v_3d_extract_group_in_corr.py +1 -1
  267. niwrap_afni/afni/v_3d_extrema.py +1 -1
  268. niwrap_afni/afni/v_3d_fdr.py +1 -1
  269. niwrap_afni/afni/v_3d_fft.py +1 -1
  270. niwrap_afni/afni/v_3d_friedman.py +1 -1
  271. niwrap_afni/afni/v_3d_fwhmx.py +1 -1
  272. niwrap_afni/afni/v_3d_gen_feature_dist.py +1 -1
  273. niwrap_afni/afni/v_3d_gen_priors.py +1 -1
  274. niwrap_afni/afni/v_3d_getrow.py +1 -1
  275. niwrap_afni/afni/v_3d_grayplot.py +1 -1
  276. niwrap_afni/afni/v_3d_group_in_corr.py +1 -1
  277. niwrap_afni/afni/v_3d_hist.py +1 -1
  278. niwrap_afni/afni/v_3d_icc.py +1 -1
  279. niwrap_afni/afni/v_3d_intracranial.py +1 -1
  280. niwrap_afni/afni/v_3d_inv_fmri.py +1 -1
  281. niwrap_afni/afni/v_3d_isc.py +1 -1
  282. niwrap_afni/afni/v_3d_kruskal_wallis.py +1 -1
  283. niwrap_afni/afni/v_3d_lfcd.py +1 -1
  284. niwrap_afni/afni/v_3d_lme.py +1 -1
  285. niwrap_afni/afni/v_3d_lmer.py +1 -1
  286. niwrap_afni/afni/v_3d_local_acf.py +1 -1
  287. niwrap_afni/afni/v_3d_local_bistat.py +1 -1
  288. niwrap_afni/afni/v_3d_local_histog.py +1 -1
  289. niwrap_afni/afni/v_3d_local_pv.py +1 -1
  290. niwrap_afni/afni/v_3d_local_svd.py +1 -1
  291. niwrap_afni/afni/v_3d_local_unifize.py +1 -1
  292. niwrap_afni/afni/v_3d_localstat.py +1 -1
  293. niwrap_afni/afni/v_3d_lomb_scargle.py +1 -1
  294. niwrap_afni/afni/v_3d_lrflip.py +1 -1
  295. niwrap_afni/afni/v_3d_lss.py +1 -1
  296. niwrap_afni/afni/v_3d_mann_whitney.py +1 -1
  297. niwrap_afni/afni/v_3d_mask_to_ascii.py +1 -1
  298. niwrap_afni/afni/v_3d_match.py +1 -1
  299. niwrap_afni/afni/v_3d_mean.py +1 -1
  300. niwrap_afni/afni/v_3d_median_filter.py +1 -1
  301. niwrap_afni/afni/v_3d_mema.py +1 -1
  302. niwrap_afni/afni/v_3d_mepfm.py +1 -1
  303. niwrap_afni/afni/v_3d_mse.py +1 -1
  304. niwrap_afni/afni/v_3d_mss.py +1 -1
  305. niwrap_afni/afni/v_3d_multi_thresh.py +1 -1
  306. niwrap_afni/afni/v_3d_mvm.py +1 -1
  307. niwrap_afni/afni/v_3d_mvm_validator.py +1 -1
  308. niwrap_afni/afni/v_3d_net_corr.py +1 -1
  309. niwrap_afni/afni/v_3d_nlfim.py +1 -1
  310. niwrap_afni/afni/v_3d_normality_test.py +1 -1
  311. niwrap_afni/afni/v_3d_notes.py +1 -1
  312. niwrap_afni/afni/v_3d_nwarp_adjust.py +1 -1
  313. niwrap_afni/afni/v_3d_nwarp_apply.py +1 -1
  314. niwrap_afni/afni/v_3d_nwarp_cat.py +1 -1
  315. niwrap_afni/afni/v_3d_nwarp_funcs.py +1 -1
  316. niwrap_afni/afni/v_3d_nwarp_xyz.py +1 -1
  317. niwrap_afni/afni/v_3d_overlap.py +1 -1
  318. niwrap_afni/afni/v_3d_par2_afni.py +1 -1
  319. niwrap_afni/afni/v_3d_periodogram.py +1 -1
  320. niwrap_afni/afni/v_3d_pfm.py +1 -1
  321. niwrap_afni/afni/v_3d_polyfit.py +1 -1
  322. niwrap_afni/afni/v_3d_pval.py +1 -1
  323. niwrap_afni/afni/v_3d_pvmap.py +1 -1
  324. niwrap_afni/afni/v_3d_qwarp.py +1 -1
  325. niwrap_afni/afni/v_3d_rank.py +1 -1
  326. niwrap_afni/afni/v_3d_rankizer.py +1 -1
  327. niwrap_afni/afni/v_3d_re_ho.py +1 -1
  328. niwrap_afni/afni/v_3d_reg_ana.py +1 -1
  329. niwrap_afni/afni/v_3d_remlfit.py +1 -1
  330. niwrap_afni/afni/v_3d_retino_phase.py +1 -1
  331. niwrap_afni/afni/v_3d_roistats.py +1 -1
  332. niwrap_afni/afni/v_3d_row_fillin.py +1 -1
  333. niwrap_afni/afni/v_3d_rprog_demo.py +1 -1
  334. niwrap_afni/afni/v_3d_rsfc.py +1 -1
  335. niwrap_afni/afni/v_3d_seg.py +1 -1
  336. niwrap_afni/afni/v_3d_setup_group_in_corr.py +1 -1
  337. niwrap_afni/afni/v_3d_sharpen.py +1 -1
  338. niwrap_afni/afni/v_3d_signatures.py +1 -1
  339. niwrap_afni/afni/v_3d_skull_strip.py +1 -1
  340. niwrap_afni/afni/v_3d_slice_ndice.py +1 -1
  341. niwrap_afni/afni/v_3d_space_time_corr.py +1 -1
  342. niwrap_afni/afni/v_3d_spat_norm.py +1 -1
  343. niwrap_afni/afni/v_3d_stat_clust.py +1 -1
  344. niwrap_afni/afni/v_3d_surf2_vol.py +1 -1
  345. niwrap_afni/afni/v_3d_surf_mask.py +1 -1
  346. niwrap_afni/afni/v_3d_synthesize.py +1 -1
  347. niwrap_afni/afni/v_3d_tagalign.py +1 -1
  348. niwrap_afni/afni/v_3d_tcat.py +1 -1
  349. niwrap_afni/afni/v_3d_tcorr1_d.py +1 -1
  350. niwrap_afni/afni/v_3d_tcorr_map.py +1 -1
  351. niwrap_afni/afni/v_3d_tcorrelate.py +1 -1
  352. niwrap_afni/afni/v_3d_tfilter.py +1 -1
  353. niwrap_afni/afni/v_3d_tfitter.py +1 -1
  354. niwrap_afni/afni/v_3d_threeto_rgb.py +1 -1
  355. niwrap_afni/afni/v_3d_tnorm.py +1 -1
  356. niwrap_afni/afni/v_3d_tortoiseto_here.py +1 -1
  357. niwrap_afni/afni/v_3d_toutcount.py +1 -1
  358. niwrap_afni/afni/v_3d_toy_prog.py +1 -1
  359. niwrap_afni/afni/v_3d_tproject.py +1 -1
  360. niwrap_afni/afni/v_3d_tqual.py +1 -1
  361. niwrap_afni/afni/v_3d_track_id.py +1 -1
  362. niwrap_afni/afni/v_3d_trfix.py +1 -1
  363. niwrap_afni/afni/v_3d_tsgen.py +1 -1
  364. niwrap_afni/afni/v_3d_tshift.py +1 -1
  365. niwrap_afni/afni/v_3d_tsmooth.py +1 -1
  366. niwrap_afni/afni/v_3d_tsort.py +1 -1
  367. niwrap_afni/afni/v_3d_tsplit4_d.py +1 -1
  368. niwrap_afni/afni/v_3d_tstat.py +1 -1
  369. niwrap_afni/afni/v_3d_tto1_d.py +1 -1
  370. niwrap_afni/afni/v_3d_twoto_complex.py +1 -1
  371. niwrap_afni/afni/v_3d_undump.py +1 -1
  372. niwrap_afni/afni/v_3d_unifize.py +1 -1
  373. niwrap_afni/afni/v_3d_upsample.py +1 -1
  374. niwrap_afni/afni/v_3d_vec_rgb_to_hsl.py +1 -1
  375. niwrap_afni/afni/v_3d_vol2_surf.py +1 -1
  376. niwrap_afni/afni/v_3d_warp.py +1 -1
  377. niwrap_afni/afni/v_3d_warp_drive.py +1 -1
  378. niwrap_afni/afni/v_3d_wilcoxon.py +1 -1
  379. niwrap_afni/afni/v_3d_winsor.py +1 -1
  380. niwrap_afni/afni/v_3d_xclust_sim.py +1 -1
  381. niwrap_afni/afni/v_3d_xyzcat.py +1 -1
  382. niwrap_afni/afni/v_3d_zcat.py +1 -1
  383. niwrap_afni/afni/v_3d_zcutup.py +1 -1
  384. niwrap_afni/afni/v_3d_zeropad.py +1 -1
  385. niwrap_afni/afni/v_3d_zipper_zapper.py +1 -1
  386. niwrap_afni/afni/v_3d_zregrid.py +1 -1
  387. niwrap_afni/afni/v_3danisosmooth.py +1 -1
  388. niwrap_afni/afni/v_3daxialize.py +1 -1
  389. niwrap_afni/afni/v_3dbucket.py +1 -1
  390. niwrap_afni/afni/v_3dcalc.py +1 -1
  391. niwrap_afni/afni/v_3dclust.py +1 -1
  392. niwrap_afni/afni/v_3dcopy.py +1 -1
  393. niwrap_afni/afni/v_3ddelay.py +1 -1
  394. niwrap_afni/afni/v_3ddot.py +1 -1
  395. niwrap_afni/afni/v_3ddot_beta.py +1 -1
  396. niwrap_afni/afni/v_3dedge3.py +1 -1
  397. niwrap_afni/afni/v_3dedgedog.py +1 -1
  398. niwrap_afni/afni/v_3dfim_.py +1 -1
  399. niwrap_afni/afni/v_3dfractionize.py +1 -1
  400. niwrap_afni/afni/v_3dhistog.py +1 -1
  401. niwrap_afni/afni/v_3dinfill.py +1 -1
  402. niwrap_afni/afni/v_3dinfo.py +1 -1
  403. niwrap_afni/afni/v_3dkmeans.py +1 -1
  404. niwrap_afni/afni/v_3dmask_svd.py +1 -1
  405. niwrap_afni/afni/v_3dmask_tool.py +1 -1
  406. niwrap_afni/afni/v_3dmaskave.py +1 -1
  407. niwrap_afni/afni/v_3dmaskdump.py +1 -1
  408. niwrap_afni/afni/v_3dmatcalc.py +1 -1
  409. niwrap_afni/afni/v_3dmatmult.py +1 -1
  410. niwrap_afni/afni/v_3dmaxdisp.py +1 -1
  411. niwrap_afni/afni/v_3dmaxima.py +1 -1
  412. niwrap_afni/afni/v_3dmerge.py +1 -1
  413. niwrap_afni/afni/v_3dnewid.py +1 -1
  414. niwrap_afni/afni/v_3dnvals.py +1 -1
  415. niwrap_afni/afni/v_3dpc.py +1 -1
  416. niwrap_afni/afni/v_3drefit.py +1 -1
  417. niwrap_afni/afni/v_3dresample.py +1 -1
  418. niwrap_afni/afni/v_3dretroicor.py +1 -1
  419. niwrap_afni/afni/v_3drotate.py +1 -1
  420. niwrap_afni/afni/v_3dsvm.py +1 -1
  421. niwrap_afni/afni/v_3dsvm_linpredict.py +1 -1
  422. niwrap_afni/afni/v_3dto_xdataset.py +1 -1
  423. niwrap_afni/afni/v_3dttest__.py +1 -1
  424. niwrap_afni/afni/v_3dvolreg.py +1 -1
  425. niwrap_afni/afni/v_4swap.py +1 -1
  426. niwrap_afni/afni/v__1d_diff_mag.py +1 -1
  427. niwrap_afni/afni/v__2dwarper.py +1 -1
  428. niwrap_afni/afni/v__2dwarper_allin.py +1 -1
  429. niwrap_afni/afni/v__add_edge.py +1 -1
  430. niwrap_afni/afni/v__afni_env.py +1 -1
  431. niwrap_afni/afni/v__afni_orient_sign.py +1 -1
  432. niwrap_afni/afni/v__afni_r_package_install.py +1 -1
  433. niwrap_afni/afni/v__afni_refacer_make_master.py +1 -1
  434. niwrap_afni/afni/v__afni_refacer_make_onebig_a12.py +1 -1
  435. niwrap_afni/afni/v__afni_refacer_run.py +1 -1
  436. niwrap_afni/afni/v__afni_run_me.py +1 -1
  437. niwrap_afni/afni/v__align_centers.py +1 -1
  438. niwrap_afni/afni/v__align_partial_oblique.py +1 -1
  439. niwrap_afni/afni/v__anaticor.py +1 -1
  440. niwrap_afni/afni/v__animal_warper.py +1 -1
  441. niwrap_afni/afni/v__atlasize.py +1 -1
  442. niwrap_afni/afni/v__auto_tlrc.py +1 -1
  443. niwrap_afni/afni/v__build_afni_xlib.py +1 -1
  444. niwrap_afni/afni/v__center_distance.py +1 -1
  445. niwrap_afni/afni/v__chauffeur_afni.py +1 -1
  446. niwrap_afni/afni/v__check_for_afni_dset.py +1 -1
  447. niwrap_afni/afni/v__clip_volume.py +1 -1
  448. niwrap_afni/afni/v__clust_exp_cat_lab.py +1 -1
  449. niwrap_afni/afni/v__clust_exp_run_shiny.py +1 -1
  450. niwrap_afni/afni/v__command_globb.py +1 -1
  451. niwrap_afni/afni/v__compute_gcor.py +1 -1
  452. niwrap_afni/afni/v__compute_oc_weights.py +1 -1
  453. niwrap_afni/afni/v__deblank_file_names.py +1 -1
  454. niwrap_afni/afni/v__demo_prompt.py +1 -1
  455. niwrap_afni/afni/v__dice_metric.py +1 -1
  456. niwrap_afni/afni/v__diff_files.py +1 -1
  457. niwrap_afni/afni/v__diff_tree.py +1 -1
  458. niwrap_afni/afni/v__djunct_4d_imager.py +1 -1
  459. niwrap_afni/afni/v__djunct_4d_slices_to_3d_vol.py +1 -1
  460. niwrap_afni/afni/v__djunct_anonymize.py +1 -1
  461. niwrap_afni/afni/v__djunct_dwi_selector.py +1 -1
  462. niwrap_afni/afni/v__djunct_edgy_align_check.py +1 -1
  463. niwrap_afni/afni/v__djunct_modal_smoothing_with_rep.py +1 -1
  464. niwrap_afni/afni/v__djunct_montage_coordinator.py +1 -1
  465. niwrap_afni/afni/v__djunct_overlap_check.py +1 -1
  466. niwrap_afni/afni/v__djunct_ssw_intermed_edge_imgs.py +1 -1
  467. niwrap_afni/afni/v__do_examples.py +1 -1
  468. niwrap_afni/afni/v__electro_grid.py +1 -1
  469. niwrap_afni/afni/v__examine_gen_feat_dists.py +1 -1
  470. niwrap_afni/afni/v__extract_meica_ortvec.py +1 -1
  471. niwrap_afni/afni/v__fast_roi.py +1 -1
  472. niwrap_afni/afni/v__fat_tract_colorize.py +1 -1
  473. niwrap_afni/afni/v__find_afni_dset_path.py +1 -1
  474. niwrap_afni/afni/v__fix_fssphere.py +1 -1
  475. niwrap_afni/afni/v__fs_roi_label.py +1 -1
  476. niwrap_afni/afni/v__fslabel2dset.py +1 -1
  477. niwrap_afni/afni/v__get_afni_dims.py +1 -1
  478. niwrap_afni/afni/v__get_afni_id.py +1 -1
  479. niwrap_afni/afni/v__get_afni_orient.py +1 -1
  480. niwrap_afni/afni/v__get_afni_res.py +1 -1
  481. niwrap_afni/afni/v__get_afni_version.py +1 -1
  482. niwrap_afni/afni/v__get_afni_view.py +1 -1
  483. niwrap_afni/afni/v__grad_flip_test.py +1 -1
  484. niwrap_afni/afni/v__grayplot.py +1 -1
  485. niwrap_afni/afni/v__help_afni.py +1 -1
  486. niwrap_afni/afni/v__is_oblique.py +1 -1
  487. niwrap_afni/afni/v__make_label_table.py +1 -1
  488. niwrap_afni/afni/v__make_plug_diff.py +1 -1
  489. niwrap_afni/afni/v__measure_bb_thick.py +1 -1
  490. niwrap_afni/afni/v__measure_erosion_thick.py +1 -1
  491. niwrap_afni/afni/v__measure_in2out.py +1 -1
  492. niwrap_afni/afni/v__move_to_series_dirs.py +1 -1
  493. niwrap_afni/afni/v__no_ext.py +1 -1
  494. niwrap_afni/afni/v__no_pound.py +1 -1
  495. niwrap_afni/afni/v__noisy_skull_strip.py +1 -1
  496. niwrap_afni/afni/v__np.py +1 -1
  497. niwrap_afni/afni/v__parse_afni_name.py +1 -1
  498. niwrap_afni/afni/v__quiet_talkers.py +1 -1
  499. niwrap_afni/afni/v__radial_correlate.py +1 -1
  500. niwrap_afni/afni/v__rename_panga.py +1 -1
  501. niwrap_afni/afni/v__reorder.py +1 -1
  502. niwrap_afni/afni/v__retino_proc.py +1 -1
  503. niwrap_afni/afni/v__roi_corr_mat.py +1 -1
  504. niwrap_afni/afni/v__roi_decluster.py +1 -1
  505. niwrap_afni/afni/v__roi_modal_grow.py +1 -1
  506. niwrap_afni/afni/v__scale_volume.py +1 -1
  507. niwrap_afni/afni/v__script_check.py +1 -1
  508. niwrap_afni/afni/v__shift_volume.py +1 -1
  509. niwrap_afni/afni/v__show_dynamic_range.py +1 -1
  510. niwrap_afni/afni/v__simulate_motion.py +1 -1
  511. niwrap_afni/afni/v__skull_strip_touch_up.py +1 -1
  512. niwrap_afni/afni/v__snapshot_volreg.py +1 -1
  513. niwrap_afni/afni/v__spharm_examples.py +1 -1
  514. niwrap_afni/afni/v__sswarper.py +1 -1
  515. niwrap_afni/afni/v__statauxcode.py +1 -1
  516. niwrap_afni/afni/v__suma_acknowledge.py +1 -1
  517. niwrap_afni/afni/v__suma_align_to_experiment.py +1 -1
  518. niwrap_afni/afni/v__suma_fsvol_to_brik.py +1 -1
  519. niwrap_afni/afni/v__suma_make_spec_caret.py +1 -1
  520. niwrap_afni/afni/v__suma_make_spec_fs.py +1 -1
  521. niwrap_afni/afni/v__suma_make_spec_sf.py +1 -1
  522. niwrap_afni/afni/v__suma_renumber_fs.py +1 -1
  523. niwrap_afni/afni/v__suma_reprefixize_spec.py +1 -1
  524. niwrap_afni/afni/v__surf_to_vol_spackle.py +1 -1
  525. niwrap_afni/afni/v__t1scale.py +1 -1
  526. niwrap_afni/afni/v__thickness_master.py +1 -1
  527. niwrap_afni/afni/v__to_mni_awarp.py +1 -1
  528. niwrap_afni/afni/v__to_mni_qwarpar.py +1 -1
  529. niwrap_afni/afni/v__update_afni_binaries.py +1 -1
  530. niwrap_afni/afni/v__xyz_to_ijk.py +1 -1
  531. niwrap_afni/afni/vecwarp.py +1 -1
  532. niwrap_afni/afni/waver.py +1 -1
  533. niwrap_afni/afni/whirlgif.py +1 -1
  534. niwrap_afni/afni/xmat_tool_py.py +1 -1
  535. {niwrap_afni-0.5.3.dist-info → niwrap_afni-0.6.1.dist-info}/METADATA +1 -1
  536. niwrap_afni-0.6.1.dist-info/RECORD +569 -0
  537. niwrap_afni-0.5.3.dist-info/RECORD +0 -569
  538. {niwrap_afni-0.5.3.dist-info → niwrap_afni-0.6.1.dist-info}/WHEEL +0 -0
niwrap_afni/afni/plugout_tt.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  PLUGOUT_TT_METADATA = Metadata(
9
- id="ba7ffb9cb6205a1d454721d39cc9b04cfa68ec9a.boutiques",
9
+ id="04af4d4c1502c52e54a05f75f6835830544e9ccb.boutiques",
10
10
  name="plugout_tt",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/plugout_tta.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  PLUGOUT_TTA_METADATA = Metadata(
9
- id="527ba3843cf35faf98349b2c5641637095261844.boutiques",
9
+ id="26a67b6d99edd0b87b407eb196b2417061d34e4e.boutiques",
10
10
  name="plugout_tta",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/pta.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  PTA_METADATA = Metadata(
9
- id="4e961b6423dd3c4934a447dbf22ed74e7465c3df.boutiques",
9
+ id="d6f381ad3d83e22142bf2f95cc5bcacf92678029.boutiques",
10
10
  name="PTA",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/qdelaunay.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  QDELAUNAY_METADATA = Metadata(
9
- id="6ffd24be5e49d65ad58c48581dbc1c38e779c71c.boutiques",
9
+ id="a916e82e97bc11f21ddb66b1db2b18fd597bc7b9.boutiques",
10
10
  name="qdelaunay",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/qhull.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  QHULL_METADATA = Metadata(
9
- id="d25dad9388d53afd5a2f6019c508abe651c2e611.boutiques",
9
+ id="36c4abb8c29f69fab57cfb4a2bc32d5fb32edf2e.boutiques",
10
10
  name="qhull",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/quick_alpha_vals_py.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  QUICK_ALPHA_VALS_PY_METADATA = Metadata(
9
- id="467c10597885378ee65e5261792a6d6f5203efb5.boutiques",
9
+ id="43400d28d72275606480ec0f8739d52a9c960123.boutiques",
10
10
  name="quick.alpha.vals.py",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/quickspec.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  QUICKSPEC_METADATA = Metadata(
9
- id="0a985ab38a04ef53341c98e04d446660dcd3c0c6.boutiques",
9
+ id="46432d665730d07674145b924b55e89f5ce5660b.boutiques",
10
10
  name="quickspec",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/quickspec_sl.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  QUICKSPEC_SL_METADATA = Metadata(
9
- id="6ad0ef7a3cf68472db5f2c42ec5677d562d0ca24.boutiques",
9
+ id="e5cdd0aedd96bc6df0f947244131010bf4fd383f.boutiques",
10
10
  name="quickspecSL",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/quotize.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  QUOTIZE_METADATA = Metadata(
9
- id="d23de9ba9a8a0ec51eec10d409b73d3f766156d0.boutiques",
9
+ id="4c584c1c53b452f98fe6627b0010b0bc7d24c8a7.boutiques",
10
10
  name="quotize",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/r_pkgs_install.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  R_PKGS_INSTALL_METADATA = Metadata(
9
- id="9c9d4c7ec7df54a4bd835bc8c7156ea51895da44.boutiques",
9
+ id="02fcafb674321d658d1a59f536c7612b3e27207f.boutiques",
10
10
  name="rPkgsInstall",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/rba.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  RBA_METADATA = Metadata(
9
- id="787dd7e6ba494572a30d5b3c250d17d1a6fddc8c.boutiques",
9
+ id="180fca902f5ffecfd9602bea793e87295168a52b.boutiques",
10
10
  name="RBA",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/rbox.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  RBOX_METADATA = Metadata(
9
- id="9fdf14ab8e16f325f5ea7e753f75ed7953ef61ba.boutiques",
9
+ id="67924a2ff0036f0fdd2043af4f02345db414c076.boutiques",
10
10
  name="rbox",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
@@ -33,7 +33,6 @@ RboxParameters = typing.TypedDict('RboxParameters', {
33
33
  "remove_command_line": bool,
34
34
  "time_seed": bool,
35
35
  "integer_coordinates": bool,
36
- "bounding_box_1": typing.NotRequired[float | None],
37
36
  "offset": typing.NotRequired[float | None],
38
37
  "user_seed": typing.NotRequired[float | None],
39
38
  "mesh_lattice": typing.NotRequired[list[str] | None],
@@ -98,7 +97,6 @@ def rbox_params(
98
97
  remove_command_line: bool = False,
99
98
  time_seed: bool = False,
100
99
  integer_coordinates: bool = False,
101
- bounding_box_1: float | None = None,
102
100
  offset: float | None = None,
103
101
  user_seed: float | None = None,
104
102
  mesh_lattice: list[str] | None = None,
@@ -131,7 +129,6 @@ def rbox_params(
131
129
  remove_command_line: Remove command line from the first line of output.
132
130
  time_seed: Use time as the random number seed (default is command line).
133
131
  integer_coordinates: Print integer coordinates, default 'Bn' is 1e+06.
134
- bounding_box_1: Bounding box coordinates, default 0.5.
135
132
  offset: Offset coordinates by n.
136
133
  user_seed: Use n as the random number seed.
137
134
  mesh_lattice: Lattice (Mesh) rotated by [n,-m,0], [m,n,0], [0,0,r], ...
@@ -164,8 +161,6 @@ def rbox_params(
164
161
  params["random_disk"] = random_disk
165
162
  if bounding_box is not None:
166
163
  params["bounding_box"] = bounding_box
167
- if bounding_box_1 is not None:
168
- params["bounding_box_1"] = bounding_box_1
169
164
  if offset is not None:
170
165
  params["offset"] = offset
171
166
  if user_seed is not None:
@@ -237,11 +232,6 @@ def rbox_cargs(
237
232
  cargs.append("t")
238
233
  if params.get("integer_coordinates"):
239
234
  cargs.append("z")
240
- if params.get("bounding_box_1") is not None:
241
- cargs.extend([
242
- "B",
243
- str(params.get("bounding_box_1"))
244
- ])
245
235
  if params.get("offset") is not None:
246
236
  cargs.extend([
247
237
  "O",
@@ -322,7 +312,6 @@ def rbox(
322
312
  remove_command_line: bool = False,
323
313
  time_seed: bool = False,
324
314
  integer_coordinates: bool = False,
325
- bounding_box_1: float | None = None,
326
315
  offset: float | None = None,
327
316
  user_seed: float | None = None,
328
317
  mesh_lattice: list[str] | None = None,
@@ -360,7 +349,6 @@ def rbox(
360
349
  remove_command_line: Remove command line from the first line of output.
361
350
  time_seed: Use time as the random number seed (default is command line).
362
351
  integer_coordinates: Print integer coordinates, default 'Bn' is 1e+06.
363
- bounding_box_1: Bounding box coordinates, default 0.5.
364
352
  offset: Offset coordinates by n.
365
353
  user_seed: Use n as the random number seed.
366
354
  mesh_lattice: Lattice (Mesh) rotated by [n,-m,0], [m,n,0], [0,0,r], ...
@@ -389,7 +377,6 @@ def rbox(
389
377
  remove_command_line=remove_command_line,
390
378
  time_seed=time_seed,
391
379
  integer_coordinates=integer_coordinates,
392
- bounding_box_1=bounding_box_1,
393
380
  offset=offset,
394
381
  user_seed=user_seed,
395
382
  mesh_lattice=mesh_lattice,
niwrap_afni/afni/read_matlab_files_py.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  READ_MATLAB_FILES_PY_METADATA = Metadata(
9
- id="228461aad9e4f1abdf8c4f6cdf4dda42da06fc96.boutiques",
9
+ id="d93c09c43aac0af7cf212aad65ea83ad160cf02e.boutiques",
10
10
  name="read_matlab_files.py",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/realtime_receiver.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  REALTIME_RECEIVER_METADATA = Metadata(
9
- id="558c634c7b6bcd0f07865ebb60363d7d2a9737a2.boutiques",
9
+ id="3861e74ecb1900a71d5f24f43aeca5e7e336549d.boutiques",
10
10
  name="realtime_receiver",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/retro_ts_py.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  RETRO_TS_PY_METADATA = Metadata(
9
- id="cc5cade6ed0e2d569151f1194c507bd0b645c37b.boutiques",
9
+ id="79fe337b0aef3f964a4c552f4dbbd2809f5b1792.boutiques",
10
10
  name="RetroTS.py",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/rmz.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  RMZ_METADATA = Metadata(
9
- id="22b10eb7b144fa126d7ddab3cdc645947980a96b.boutiques",
9
+ id="7b3623e5a5e9b6c5f11ff499f54a7ef56d132993.boutiques",
10
10
  name="rmz",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/roi2dataset.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  ROI2DATASET_METADATA = Metadata(
9
- id="5ce644f007ce2ecc979c958450e6f9ce7de594be.boutiques",
9
+ id="5d5ce9ca7d281ca079da489d9aa946cea52cf676.boutiques",
10
10
  name="ROI2dataset",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/roigrow.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  ROIGROW_METADATA = Metadata(
9
- id="12bb44f9721e85ea23d86fcfc727735d33f56b50.boutiques",
9
+ id="f4aa7a593eb763743bac7b66d6cbfc7d7a8e1e49.boutiques",
10
10
  name="ROIgrow",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/rotcom.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  ROTCOM_METADATA = Metadata(
9
- id="65366e1283781ddcf84d07b0c61d20c1cdbf07ba.boutiques",
9
+ id="fd59ff87f6727df1beafdf436f19aba6a53a3cea.boutiques",
10
10
  name="rotcom",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/rsfgen.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  RSFGEN_METADATA = Metadata(
9
- id="42de4c95300ddfa6a27f2ddbc5b6d9dc63cdd292.boutiques",
9
+ id="11b25a34307a16d17dd031e0865f508903b6754c.boutiques",
10
10
  name="RSFgen",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/rtfeedme.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  RTFEEDME_METADATA = Metadata(
9
- id="32964e0c08bfc25e6c4f6eca5347bfc95b91dd98.boutiques",
9
+ id="10a9c1f1dd1351e0a684111b51d759ea5478ae34.boutiques",
10
10
  name="rtfeedme",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/samp_bias.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SAMP_BIAS_METADATA = Metadata(
9
- id="e1325d010e905394733e9c7b189375c71f01d74b.boutiques",
9
+ id="73bcedebddacb73e50fa496ef2f4a5a44b29fdd5.boutiques",
10
10
  name="SampBias",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/scale_to_map.py CHANGED
@@ -6,13 +6,20 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SCALE_TO_MAP_METADATA = Metadata(
9
- id="2f7e7a834eba315bf3a7ddf886a5f54b169d9aeb.boutiques",
9
+ id="9a992db39f38d17e9c86690f3d2805363790bd24.boutiques",
10
10
  name="ScaleToMap",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
13
13
  )
14
14
 
15
15
 
16
+ ScaleToMapTraceParameters = typing.TypedDict('ScaleToMapTraceParameters', {
17
+ "__STYX_TYPE__": typing.Literal["trace"],
18
+ "trace": bool,
19
+ "TRACE": bool,
20
+ })
21
+
22
+
16
23
  ScaleToMapParameters = typing.TypedDict('ScaleToMapParameters', {
17
24
  "__STYX_TYPE__": typing.Literal["ScaleToMap"],
18
25
  "input_file": InputPathType,
@@ -41,8 +48,7 @@ ScaleToMapParameters = typing.TypedDict('ScaleToMapParameters', {
41
48
  "novolreg": bool,
42
49
  "noxform": bool,
43
50
  "setenv": typing.NotRequired[str | None],
44
- "TRACE": bool,
45
- "TRACE_1": bool,
51
+ "trace": typing.NotRequired[ScaleToMapTraceParameters | None],
46
52
  "nomall": bool,
47
53
  "yesmall": bool,
48
54
  })
@@ -61,6 +67,7 @@ def dyn_cargs(
61
67
  """
62
68
  return {
63
69
  "ScaleToMap": scale_to_map_cargs,
70
+ "trace": scale_to_map_trace_cargs,
64
71
  }.get(t)
65
72
 
66
73
 
@@ -79,6 +86,49 @@ def dyn_outputs(
79
86
  }.get(t)
80
87
 
81
88
 
89
+ def scale_to_map_trace_params(
90
+ trace_: bool = False,
91
+ trace_2: bool = False,
92
+ ) -> ScaleToMapTraceParameters:
93
+ """
94
+ Build parameters.
95
+
96
+ Args:
97
+ trace_: Turns on In/Out debug and Memory tracing. It's recommended to\
98
+ redirect stdout to a file when using this option.
99
+ trace_2: Turns on extreme tracing.
100
+ Returns:
101
+ Parameter dictionary
102
+ """
103
+ params = {
104
+ "__STYXTYPE__": "trace",
105
+ "trace": trace_,
106
+ "TRACE": trace_2,
107
+ }
108
+ return params
109
+
110
+
111
+ def scale_to_map_trace_cargs(
112
+ params: ScaleToMapTraceParameters,
113
+ execution: Execution,
114
+ ) -> list[str]:
115
+ """
116
+ Build command-line arguments from parameters.
117
+
118
+ Args:
119
+ params: The parameters.
120
+ execution: The execution object for resolving input paths.
121
+ Returns:
122
+ Command-line arguments.
123
+ """
124
+ cargs = []
125
+ if params.get("trace"):
126
+ cargs.append("-trace")
127
+ if params.get("TRACE"):
128
+ cargs.append("-TRACE")
129
+ return cargs
130
+
131
+
82
132
  class ScaleToMapOutputs(typing.NamedTuple):
83
133
  """
84
134
  Output object returned when calling `scale_to_map(...)`.
@@ -114,8 +164,7 @@ def scale_to_map_params(
114
164
  novolreg: bool = False,
115
165
  noxform: bool = False,
116
166
  setenv: str | None = None,
117
- trace_: bool = False,
118
- trace_1: bool = False,
167
+ trace_: ScaleToMapTraceParameters | None = None,
119
168
  nomall: bool = False,
120
169
  yesmall: bool = False,
121
170
  ) -> ScaleToMapParameters:
@@ -152,8 +201,8 @@ def scale_to_map_params(
152
201
  noxform: Same as -novolreg.
153
202
  setenv: Set environment variable ENVname to ENVvalue. Quotes are\
154
203
  necessary.
155
- trace_: Turn on extreme tracing.
156
- trace_1: Turn on extreme tracing.
204
+ trace_: Turns on In/Out debug and Memory tracing. It's recommended to\
205
+ redirect stdout to a file when using this option.
157
206
  nomall: Turn off memory tracing.
158
207
  yesmall: Turn on memory tracing (default).
159
208
  Returns:
@@ -176,8 +225,6 @@ def scale_to_map_params(
176
225
  "showdb": showdb,
177
226
  "novolreg": novolreg,
178
227
  "noxform": noxform,
179
- "TRACE": trace_,
180
- "TRACE_1": trace_1,
181
228
  "nomall": nomall,
182
229
  "yesmall": yesmall,
183
230
  }
@@ -203,6 +250,8 @@ def scale_to_map_params(
203
250
  params["br"] = br
204
251
  if setenv is not None:
205
252
  params["setenv"] = setenv
253
+ if trace_ is not None:
254
+ params["trace"] = trace_
206
255
  return params
207
256
 
208
257
 
@@ -303,10 +352,8 @@ def scale_to_map_cargs(
303
352
  "-setenv",
304
353
  params.get("setenv")
305
354
  ])
306
- if params.get("TRACE"):
307
- cargs.append("-TRACE")
308
- if params.get("TRACE_1"):
309
- cargs.append("-TRACE")
355
+ if params.get("trace") is not None:
356
+ cargs.extend(dyn_cargs(params.get("trace")["__STYXTYPE__"])(params.get("trace"), execution))
310
357
  if params.get("nomall"):
311
358
  cargs.append("-nomall")
312
359
  if params.get("yesmall"):
@@ -384,8 +431,7 @@ def scale_to_map(
384
431
  novolreg: bool = False,
385
432
  noxform: bool = False,
386
433
  setenv: str | None = None,
387
- trace_: bool = False,
388
- trace_1: bool = False,
434
+ trace_: ScaleToMapTraceParameters | None = None,
389
435
  nomall: bool = False,
390
436
  yesmall: bool = False,
391
437
  runner: Runner | None = None,
@@ -427,8 +473,8 @@ def scale_to_map(
427
473
  noxform: Same as -novolreg.
428
474
  setenv: Set environment variable ENVname to ENVvalue. Quotes are\
429
475
  necessary.
430
- trace_: Turn on extreme tracing.
431
- trace_1: Turn on extreme tracing.
476
+ trace_: Turns on In/Out debug and Memory tracing. It's recommended to\
477
+ redirect stdout to a file when using this option.
432
478
  nomall: Turn off memory tracing.
433
479
  yesmall: Turn on memory tracing (default).
434
480
  runner: Command runner.
@@ -465,7 +511,6 @@ def scale_to_map(
465
511
  noxform=noxform,
466
512
  setenv=setenv,
467
513
  trace_=trace_,
468
- trace_1=trace_1,
469
514
  nomall=nomall,
470
515
  yesmall=yesmall,
471
516
  )
@@ -476,6 +521,8 @@ __all__ = [
476
521
  "SCALE_TO_MAP_METADATA",
477
522
  "ScaleToMapOutputs",
478
523
  "ScaleToMapParameters",
524
+ "ScaleToMapTraceParameters",
479
525
  "scale_to_map",
480
526
  "scale_to_map_params",
527
+ "scale_to_map_trace_params",
481
528
  ]
niwrap_afni/afni/serial_helper.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SERIAL_HELPER_METADATA = Metadata(
9
- id="4df7ea7f38a6767c1aba72a89599b9e5c022108c.boutiques",
9
+ id="8178f88c2d781af8e9aeb5797401a6ba061486fd.boutiques",
10
10
  name="serial_helper",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/sfim.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SFIM_METADATA = Metadata(
9
- id="a13eb6a1647edd69950d6fbc3efb98691eeddce5.boutiques",
9
+ id="b0a8b5208cc61585402c5d268873f5a63b76a9e6.boutiques",
10
10
  name="sfim",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/slow_surf_clustsim_py.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SLOW_SURF_CLUSTSIM_PY_METADATA = Metadata(
9
- id="a7e11fd0c89e1ec778cc2b10b112e4d443b843ac.boutiques",
9
+ id="ddeecc1fb59992d9c9426870d78e92238ec8b21a.boutiques",
10
10
  name="slow_surf_clustsim.py",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/spharm_deco.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SPHARM_DECO_METADATA = Metadata(
9
- id="6c5408eda75c3fcbee3c137d9a99cb7b538fb149.boutiques",
9
+ id="17ed1e33cae4fff9df92d0adb8f450d2e0de7d46.boutiques",
10
10
  name="SpharmDeco",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/stimband.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  STIMBAND_METADATA = Metadata(
9
- id="ca5a92d5ac7d886044df23850ca6ef4054823866.boutiques",
9
+ id="0fd66dc3c918c574a8c27c7cb16b3f971f5ac250.boutiques",
10
10
  name="stimband",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/strblast.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  STRBLAST_METADATA = Metadata(
9
- id="a2cee2c629b430408b17d4c3a5b48c6d60070e17.boutiques",
9
+ id="f32f04cd48a95c18324b547f5e4333f3e6c5f926.boutiques",
10
10
  name="strblast",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/suma_change_spec.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SUMA_CHANGE_SPEC_METADATA = Metadata(
9
- id="4bf222ffae950010f81275acc0be3c92fdd2d01c.boutiques",
9
+ id="f13f0176c0f78fdf29d29c5c7899209d6deff415.boutiques",
10
10
  name="suma_change_spec",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/suma_glxdino.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SUMA_GLXDINO_METADATA = Metadata(
9
- id="010ab925596263ceb26cb004e13fc1698878aefc.boutiques",
9
+ id="db20e466e60a0e5e1fdf389e067115a796b337a4.boutiques",
10
10
  name="SUMA_glxdino",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf2_vol_coord.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF2_VOL_COORD_METADATA = Metadata(
9
- id="a33b1b240a4fa87f79ece3a7f2283645dc3cfa8c.boutiques",
9
+ id="6fe6474a33c8e23675d3aa29e680feb2c2b37bc1.boutiques",
10
10
  name="Surf2VolCoord",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_clust.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_CLUST_METADATA = Metadata(
9
- id="2346425eb197f04f33322dea847636dd74a3b8a3.boutiques",
9
+ id="7db6f82a57760f7846747e87ee25e2273bf54f9f.boutiques",
10
10
  name="SurfClust",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_dist.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_DIST_METADATA = Metadata(
9
- id="8b5c7176c66dac8d05149bdf650ac16471da45a7.boutiques",
9
+ id="1440f0671a85a23be73cba7aba7157807f5c4c6f.boutiques",
10
10
  name="SurfDist",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_dset_info.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_DSET_INFO_METADATA = Metadata(
9
- id="0eea0d47be8d446fa32a71638d9796998abd8047.boutiques",
9
+ id="9666989bfdfef6c61d4a14a8494e8f393de0b2fa.boutiques",
10
10
  name="SurfDsetInfo",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_extrema.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_EXTREMA_METADATA = Metadata(
9
- id="84b854a87242a5d67c86897020fb70cd6c8e1945.boutiques",
9
+ id="507b05ba58f203a73a716d406ccd14e862163ac3.boutiques",
10
10
  name="SurfExtrema",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_fwhm.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_FWHM_METADATA = Metadata(
9
- id="c0c295cfa2772a4d6c7970693902b2233ab45c11.boutiques",
9
+ id="5f3d67852b7237a8609f944b36387016b6ab2c24.boutiques",
10
10
  name="SurfFWHM",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_info.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_INFO_METADATA = Metadata(
9
- id="869be3f2fd4b338333ddb5e88a1f6d232910e89e.boutiques",
9
+ id="da9fc16e9b8222d19dae2ab29da591e8a5f4a0cf.boutiques",
10
10
  name="SurfInfo",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_layers.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_LAYERS_METADATA = Metadata(
9
- id="e966c2d7b51c012df1e75b107d18f44f83eac9a4.boutiques",
9
+ id="5e9aa050f045ea0f592f85e3b66ef116c3891cbb.boutiques",
10
10
  name="SurfLayers",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_localstat.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_LOCALSTAT_METADATA = Metadata(
9
- id="5a51275b28d3b9824220c99fed994126246f2f36.boutiques",
9
+ id="68d36b45710d5771191842721ee9dc58a7e2c6f9.boutiques",
10
10
  name="SurfLocalstat",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",
niwrap_afni/afni/surf_measures.py CHANGED
@@ -6,7 +6,7 @@ import pathlib
6
6
  from styxdefs import *
7
7
 
8
8
  SURF_MEASURES_METADATA = Metadata(
9
- id="21378ea7d8b0e920275d5e4fab477aa23c434ab4.boutiques",
9
+ id="081416cc50152fae2d98653e2c0c325389329860.boutiques",
10
10
  name="SurfMeasures",
11
11
  package="afni",
12
12
  container_image_tag="afni/afni_make_build:AFNI_24.2.06",