ngsolve 6.2.2404.post156.dev0__cp39-cp39-win_amd64.whl → 6.2.2406.post112.dev1__cp39-cp39-win_amd64.whl

ngsolve/demos/intro/cmagnet.py

@@ -0,0 +1,62 @@
+from netgen.csg import *
+from ngsolve import *
+
+
+def MakeGeometry():
+    geometry = CSGeometry()
+    box = OrthoBrick(Pnt(-1,-1,-1),Pnt(2,1,2)).bc("outer")
+
+    core = OrthoBrick(Pnt(0,-0.05,0),Pnt(0.8,0.05,1))- \
+           OrthoBrick(Pnt(0.1,-1,0.1),Pnt(0.7,1,0.9))- \
+           OrthoBrick(Pnt(0.5,-1,0.4),Pnt(1,1,0.6)).maxh(0.2).mat("core")
+    
+    coil = (Cylinder(Pnt(0.05,0,0), Pnt(0.05,0,1), 0.3) - \
+            Cylinder(Pnt(0.05,0,0), Pnt(0.05,0,1), 0.15)) * \
+            OrthoBrick (Pnt(-1,-1,0.3),Pnt(1,1,0.7)).maxh(0.2).mat("coil")
+    
+    geometry.Add ((box-core-coil).mat("air"))
+    geometry.Add (core)
+    geometry.Add (coil)
+    return geometry
+
+
+
+ngmesh = MakeGeometry().GenerateMesh(maxh=0.5)
+ngmesh.Save("coil.vol")
+mesh = Mesh(ngmesh)
+
+# curve elements for geometry approximation
+mesh.Curve(5)
+
+ngsglobals.msg_level = 5
+
+fes = HCurl(mesh, order=4, dirichlet="outer", nograds = True)
+
+# u and v refer to trial and test-functions in the definition of forms below
+u = fes.TrialFunction()
+v = fes.TestFunction()
+
+mur = mesh.MaterialCF({ "core" : 1000 }, default=1)
+mu0 = 1.257e-6
+nu = 1/(mu0*mur)
+
+a = BilinearForm(fes, symmetric=True)
+a += nu*curl(u)*curl(v)*dx + 1e-6*nu*u*v*dx
+
+c = Preconditioner(a, type="bddc")
+# c = Preconditioner(a, type="multigrid", flags = { "smoother" : "block" } )
+
+f = LinearForm(fes)
+f += CoefficientFunction((y,0.05-x,0)) * v * dx("coil")
+
+u = GridFunction(fes)
+
+
+with TaskManager():
+    a.Assemble()
+    f.Assemble()
+    solver = CGSolver(mat=a.mat, pre=c.mat)
+    u.vec.data = solver * f.vec
+
+
+Draw (u.Deriv(), mesh, "B-field", draw_surf=False)

ngsolve/demos/intro/elasticity.py

@@ -0,0 +1,76 @@
+#
+# geometric non-linear elasticity with Neo-Hooke hyperelastic material
+#
+# featuring automatic differentiation in SymbolicEnergy
+#
+
+import netgen.geom2d as geom2d
+from ngsolve import *
+
+geo = geom2d.SplineGeometry()
+pnums = [ geo.AddPoint (x,y,maxh=0.01) for x,y in [(0,0), (1,0), (1,0.1), (0,0.1)] ]
+for p1,p2,bc in [(0,1,"bot"), (1,2,"right"), (2,3,"top"), (3,0,"left")]:
+     geo.Append(["line", pnums[p1], pnums[p2]], bc=bc)
+mesh = Mesh(geo.GenerateMesh(maxh=0.05))
+
+
+E, nu = 210, 0.2
+mu  = E / 2 / (1+nu)
+lam = E * nu / ((1+nu)*(1-2*nu))
+
+fes = H1(mesh, order=2, dirichlet="left", dim=mesh.dim)
+# fes = VectorH1(mesh, order=2, dirichlet="left")
+
+u  = fes.TrialFunction()
+
+force = CoefficientFunction( (0,1/2) )
+
+I = Id(mesh.dim)
+F = I + Grad(u)
+C = F.trans * F
+E = 0.5 * (C-I)
+
+def Pow(a, b):
+    return a**b  # exp (log(a)*b)
+  
+def NeoHooke (C):
+    return 0.5 * mu * (Trace(C-I) + 2*mu/lam * Pow(Det(C),-lam/2/mu) - 1)
+
+
+
+factor = Parameter(1)
+
+a = BilinearForm(fes, symmetric=False)
+a += Variation (NeoHooke(C).Compile()*dx)
+a += Variation ((-factor * InnerProduct(force,u) ).Compile()*dx)
+
+
+u = GridFunction(fes)
+u.vec[:] = 0
+
+res = u.vec.CreateVector()
+w = u.vec.CreateVector()
+
+
+for loadstep in range(10):
+    
+    print ("loadstep", loadstep)
+    factor.Set (loadstep+1)
+    
+    for it in range(5):
+        print ("Newton iteration", it)
+        print ("energy = ", a.Energy(u.vec))
+        a.Apply(u.vec, res)
+        a.AssembleLinearization(u.vec)
+        inv = a.mat.Inverse(fes.FreeDofs() ) 
+        w.data = inv*res
+        print ("err^2 = ", InnerProduct (w,res))
+        u.vec.data -= w
+    
+    Draw (u, mesh, "displacement")
+    SetVisualization (deformation=True)
+    input ("<press a key>")
+
+
+
+    

ngsolve/demos/intro/navierstokes.py

@@ -0,0 +1,74 @@
+from ngsolve import *
+
+# viscosity
+nu = 0.001
+
+# timestepping parameters
+tau = 0.001
+tend = 10
+
+from netgen.geom2d import SplineGeometry
+geo = SplineGeometry()
+geo.AddRectangle( (0, 0), (2, 0.41), bcs = ("wall", "outlet", "wall", "inlet"))
+geo.AddCircle ( (0.2, 0.2), r=0.05, leftdomain=0, rightdomain=1, bc="cyl", maxh=0.02)
+mesh = Mesh( geo.GenerateMesh(maxh=0.07))
+
+mesh.Curve(3)
+
+V = VectorH1(mesh,order=3, dirichlet="wall|cyl|inlet")
+Q = H1(mesh,order=2)
+
+X = V*Q
+
+u,p = X.TrialFunction()
+v,q = X.TestFunction()
+
+stokes = nu*InnerProduct(grad(u), grad(v))+div(u)*q+div(v)*p - 1e-10*p*q
+a = BilinearForm(X, symmetric=True)
+a += stokes*dx
+a.Assemble()
+
+# nothing here ...
+f = LinearForm(X)   
+f.Assemble()
+
+# gridfunction for the solution
+gfu = GridFunction(X)
+
+# parabolic inflow at inlet:
+uin = CoefficientFunction( (1.5*4*y*(0.41-y)/(0.41*0.41), 0) )
+gfu.components[0].Set(uin, definedon=mesh.Boundaries("inlet"))
+
+# solve Stokes problem for initial conditions:
+inv_stokes = a.mat.Inverse(X.FreeDofs())
+
+res = f.vec.CreateVector()
+res.data = f.vec - a.mat*gfu.vec
+gfu.vec.data += inv_stokes * res
+
+
+# matrix for implicit Euler 
+mstar = BilinearForm(X, symmetric=True)
+mstar += (u*v + tau*stokes)*dx
+mstar.Assemble()
+inv = mstar.mat.Inverse(X.FreeDofs(), inverse="sparsecholesky")
+
+# the non-linear term 
+conv = BilinearForm(X, nonassemble = True)
+conv += (grad(u) * u) * v * dx
+
+# for visualization
+Draw (Norm(gfu.components[0]), mesh, "velocity", sd=3)
+
+# implicit Euler/explicit Euler splitting method:
+t = 0
+with TaskManager():
+    while t < tend:
+        print ("t=", t, end="\r")
+
+        conv.Apply (gfu.vec, res)
+        res.data += a.mat*gfu.vec
+        gfu.vec.data -= tau * inv * res    
+
+        t = t + tau
+        Redraw()

ngsolve/demos/intro/poisson.ipynb

@@ -0,0 +1,170 @@
+{
+ "cells": [
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Poisson Equation\n",
+    "==="
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Import Netgen/NGSolve Python modules:"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "from ngsolve import *\n",
+    "from netgen.geom2d import unit_square\n",
+    "import netgen.gui\n",
+    "%gui tk"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "The unit_square is a predefined domain, use Netgen to generate a mesh:"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "mesh = Mesh(unit_square.GenerateMesh(maxh=0.2))\n",
+    "Draw (mesh)"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Define a finite element space on that mesh. "
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "fes = H1(mesh, order=3, dirichlet=\"left|right|bottom|top\")\n",
+    "print (\"ndof =\", fes.ndof)"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Define linear and bilinear-forms. Forms are expressed in terms of trial and test-functions:"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "u = fes.TrialFunction()\n",
+    "v = fes.TestFunction()\n",
+    "\n",
+    "f = LinearForm(fes)\n",
+    "f += 32 * (y*(1-y)+x*(1-x)) * v * dx\n",
+    "\n",
+    "a = BilinearForm(fes)\n",
+    "a += grad(u)*grad(v)*dx\n",
+    "\n",
+    "a.Assemble()\n",
+    "f.Assemble()"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Solve the problem:"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "gfu = GridFunction(fes)\n",
+    "gfu.vec.data = a.mat.Inverse(fes.FreeDofs()) * f.vec"
+   ]
+  },
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "Plot the solution:"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "Draw (gfu)\n",
+    "Draw (-grad(gfu), mesh, \"Flux\")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "exact = 16*x*(1-x)*y*(1-y)\n",
+    "print (\"L2-error:\", sqrt (Integrate ( (gfu-exact)*(gfu-exact), mesh)))"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.8.5"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

ngsolve/demos/intro/poisson.py

@@ -0,0 +1,41 @@
+# solve the Poisson equation -Delta u = f
+# with Dirichlet boundary condition u = 0
+
+from ngsolve import *
+# from netgen.geom2d import unit_square
+
+ngsglobals.msg_level = 1
+
+# generate a triangular mesh of mesh-size 0.2
+mesh = Mesh(unit_square.GenerateMesh(maxh=0.2))
+
+# H1-conforming finite element space
+fes = H1(mesh, order=3, dirichlet=[1,2,3,4])
+
+# define trial- and test-functions
+u = fes.TrialFunction()
+v = fes.TestFunction()
+
+# the right hand side
+f = LinearForm(fes)
+f += 32 * (y*(1-y)+x*(1-x)) * v * dx
+
+# the bilinear-form 
+a = BilinearForm(fes, symmetric=True)
+a += grad(u)*grad(v)*dx
+
+a.Assemble()
+f.Assemble()
+
+# the solution field 
+gfu = GridFunction(fes)
+gfu.vec.data = a.mat.Inverse(fes.FreeDofs(), inverse="sparsecholesky") * f.vec
+# print (u.vec)
+
+
+# plot the solution (netgen-gui only)
+Draw (gfu)
+Draw (-grad(gfu), mesh, "Flux")
+
+exact = 16*x*(1-x)*y*(1-y)
+print ("L2-error:", sqrt (Integrate ( (gfu-exact)*(gfu-exact), mesh)))

ngsolve/demos/mpi/mpi_cmagnet.py

@@ -0,0 +1,87 @@
+from netgen.csg import *
+import netgen.meshing
+
+from ngsolve import *
+
+from mpi4py.MPI import COMM_WORLD as comm
+rank = comm.rank
+np = comm.size
+
+do_vtk = False
+
+def MakeGeometry():
+    geometry = CSGeometry()
+    box = OrthoBrick(Pnt(-1,-1,-1),Pnt(2,1,2)).bc("outer")
+
+    core = OrthoBrick(Pnt(0,-0.05,0),Pnt(0.8,0.05,1))- \
+           OrthoBrick(Pnt(0.1,-1,0.1),Pnt(0.7,1,0.9))- \
+           OrthoBrick(Pnt(0.5,-1,0.4),Pnt(1,1,0.6)).maxh(0.2).mat("core")
+    
+    coil = (Cylinder(Pnt(0.05,0,0), Pnt(0.05,0,1), 0.3) - \
+            Cylinder(Pnt(0.05,0,0), Pnt(0.05,0,1), 0.15)) * \
+            OrthoBrick (Pnt(-1,-1,0.3),Pnt(1,1,0.7)).maxh(0.2).mat("coil")
+    
+    geometry.Add ((box-core-coil).mat("air"))
+    geometry.Add (core)
+    geometry.Add (coil)
+    return geometry
+
+# For curving, we need the geometry. We have to
+# generate it everywhere and then set it.
+# It is not distributed automatically.
+geom = MakeGeometry()
+if rank==0:
+    # master proc generates and immediately distributes
+    ngmesh = geom.GenerateMesh(maxh=0.5)
+    ngmesh.Distribute(comm)
+else:
+    # worker procs receive mesh
+    ngmesh = netgen.meshing.Mesh.Receive(comm)
+    # and then manually set the geometry
+    ngmesh.SetGeometry(geom)
+mesh = Mesh(ngmesh)
+
+# now we can curve!
+mesh.Curve(5)
+
+ngsglobals.msg_level = 5
+
+fes = HCurl(mesh, order=4, dirichlet="outer", nograds = True)
+
+
+u = fes.TrialFunction()
+v = fes.TestFunction()
+
+mur = { "core" : 1000, "coil" : 1, "air" : 1 }
+mu0 = 1.257e-6
+
+nu_coef = [ 1/(mu0*mur[mat]) for mat in mesh.GetMaterials() ]
+
+nu = CoefficientFunction(nu_coef)
+a = BilinearForm(fes, symmetric=True)
+a += SymbolicBFI(nu*curl(u)*curl(v) + 1e-6*nu*u*v)
+
+c = Preconditioner(a, type="bddc", flags={"inverse":"masterinverse"})
+#c = Preconditioner(a, type="bddc", inverse = "mumps")
+
+f = LinearForm(fes)
+f += SymbolicLFI(CoefficientFunction((y,0.05-x,0)) * v, definedon=mesh.Materials("coil"))
+
+u = GridFunction(fes)
+
+
+a.Assemble()
+f.Assemble()
+solver = CGSolver(mat=a.mat, pre=c.mat)
+u.vec.data = solver * f.vec
+
+if do_vtk:
+    import os
+    output_path = os.path.dirname(os.path.realpath(__file__)) + "/cmagnet_output"
+    if rank==0 and not os.path.exists(output_path):
+        os.mkdir(output_path)
+    comm.Barrier() #wait until master has created the directory!!
+    vtk = VTKOutput(ma=mesh, coefs=[u.Deriv()], names=["sol"], filename=output_path+"/vtkout", subdivision=2)
+    vtk.Do()
+
+#Draw (u.Deriv(), mesh, "B-field", draw_surf=False)

ngsolve/demos/mpi/mpi_navierstokes.py

@@ -0,0 +1,117 @@
+import netgen.meshing
+from netgen.geom2d import SplineGeometry
+
+
+from ngsolve import *
+
+SetNumThreads(1)  
+
+from mpi4py.MPI import COMM_WORLD as comm
+rank = comm.rank
+np = comm.size
+
+do_vtk = False
+
+# viscosity
+nu = 0.001
+
+# timestepping parameters
+tau = 0.001
+tend = 3
+
+# mesh = Mesh("cylinder.vol")
+geo = SplineGeometry()
+geo.AddRectangle( (0, 0), (2, 0.41), bcs = ("wall", "outlet", "wall", "inlet"))
+geo.AddCircle ( (0.2, 0.2), r=0.05, leftdomain=0, rightdomain=1, bc="cyl")
+if rank==0:
+    ngmesh = geo.GenerateMesh(maxh=0.08)
+    ngmesh.Distribute(comm)
+else:
+    ngmesh = netgen.meshing.Mesh.Receive(comm)
+    ngmesh.SetGeometry(geo)
+    
+mesh = Mesh(ngmesh)
+
+#does not work with mpi yet...
+#mesh.Curve(3)
+
+V = H1(mesh,order=3, dirichlet="wall|cyl|inlet")
+Q = H1(mesh,order=2)
+
+X = FESpace([V,V,Q])
+
+ux,uy,p = X.TrialFunction()
+vx,vy,q = X.TestFunction()
+
+div_u = grad(ux)[0]+grad(uy)[1]
+div_v = grad(vx)[0]+grad(vy)[1]
+
+stokes = nu*grad(ux)*grad(vx)+nu*grad(uy)*grad(vy)+div_u*q+div_v*p - 1e-10*p*q
+a = BilinearForm(X)
+a += SymbolicBFI(stokes)
+a.Assemble()
+
+# nothing here ...
+f = LinearForm(X)   
+f.Assemble()
+
+# gridfunction for the solution
+gfu = GridFunction(X)
+
+# parabolic inflow at bc=1:
+uin = 1.5*4*y*(0.41-y)/(0.41*0.41)
+gfu.components[0].Set(uin, definedon=mesh.Boundaries("inlet"))
+
+velocity = CoefficientFunction(gfu.components[0:2])
+
+
+# solve Stokes problem for initial conditions:
+#inv_stokes = a.mat.Inverse(X.FreeDofs(), inverse="mumps")
+inv_stokes = a.mat.Inverse(X.FreeDofs(), inverse="masterinverse")
+res = f.vec.CreateVector()
+res.data = f.vec - a.mat*gfu.vec
+gfu.vec.data += inv_stokes * res
+
+# matrix for implicit Euler 
+mstar = BilinearForm(X)
+mstar += SymbolicBFI(ux*vx+uy*vy + tau*stokes)
+mstar.Assemble()
+
+# inv = mstar.mat.Inverse(X.FreeDofs(), inverse="masterinverse")
+inv = mstar.mat.Inverse(X.FreeDofs(), inverse="masterinverse")
+
+# the non-linear term 
+conv = BilinearForm(X, nonassemble = True)
+conv += SymbolicBFI( CoefficientFunction( (ux,uy) ) * (grad(ux)*vx+grad(uy)*vy) )
+
+t = 0
+vtk_interval = int(0.05/tau);
+
+import os
+#output_path = os.path.dirname(os.path.realpath(__file__)) + "/navierstokes_output"
+output_path = os.path.dirname(os.path.realpath(__file__)) + "/navierstokes_output"
+if rank==0 and not os.path.exists(output_path):
+    os.mkdir(output_path)
+comm.Barrier() #wait until master has created the directory!!
+
+if do_vtk:
+    vtk = VTKOutput(ma=mesh,coefs=[velocity],names=["u"],filename=output_path+"/vtkout",subdivision=2)
+    vtk.Do()
+
+count = 1;
+# implicit Euler/explicit Euler splitting method:
+with TaskManager():
+    while t < tend:
+        if rank==0:
+            print ("t=", t)
+            
+        conv.Apply (gfu.vec, res)
+        res.data += a.mat*gfu.vec
+        gfu.vec.data -= tau * inv * res
+
+        if count%vtk_interval==0 and do_vtk:
+            vtk.Do(time = t)
+        count = count+1;
+
+        t = t + tau
+        comm.Barrier()