ngio 0.4.7__py3-none-any.whl → 0.4.8__py3-none-any.whl

ngio/common/_masking_roi.py

@@ -168,6 +168,7 @@ def compute_masking_roi(
             z_length = None
         else:
             z_length = max_z - min_z
+
         roi = RoiPixels(
             name=str(label),
             x_length=max_x - min_x,
@@ -177,7 +178,6 @@ def compute_masking_roi(
             x=min_x,
             y=min_y,
             z=min_z,
-            t=min_t,
             label=label,
         )
 

ngio/images/_label.py

@@ -337,6 +337,6 @@ def derive_label(
 
 def build_masking_roi_table(label: Label) -> MaskingRoiTable:
     """Compute the masking ROI table for a label."""
-    array = label.get_as_dask()
+    array = label.get_as_dask(axes_order=["t", "z", "y", "x"])
     rois = compute_masking_roi(array, label.pixel_size)
     return MaskingRoiTable(rois, reference_label=label.meta.name)

ngio/utils/_datasets.py

@@ -155,5 +155,11 @@ def download_ome_zarr_dataset(
         path=download_dir,
         processor=processor,
         progressbar=progressbar,
+        # Add User-Agent to avoid 403 errors from Zenodo
+        downloader=pooch.HTTPDownloader(
+            headers={
+                "User-Agent": f"pooch/{pooch.__version__} (https://github.com/BioVisionCenter/ngio)"
+            }
+        ),
     )
     return processor.output_file()

{ngio-0.4.7.dist-info → ngio-0.4.8.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: ngio
-Version: 0.4.7
+Version: 0.4.8
 Summary: Next Generation file format IO
 Project-URL: homepage, https://github.com/BioVisionCenter/ngio
 Project-URL: repository, https://github.com/BioVisionCenter/ngio
@@ -22,7 +22,7 @@ Requires-Dist: dask[distributed]<2025.11.0
 Requires-Dist: filelock
 Requires-Dist: numpy
 Requires-Dist: ome-zarr-models
-Requires-Dist: pandas>=1.2.0
+Requires-Dist: pandas<3.0.0,>=1.2.0
 Requires-Dist: pillow
 Requires-Dist: polars
 Requires-Dist: pooch

{ngio-0.4.7.dist-info → ngio-0.4.8.dist-info}/RECORD

@@ -1,7 +1,7 @@
 ngio/__init__.py,sha256=rEgnXuU6TCejUUGsxt4eKmjMhxjYh0fYBxWF4o5YjbE,1435
 ngio/common/__init__.py,sha256=aPSuUbdGryrxbnlWrsVNe3LZoBAWC4GijR1BNH1UwuU,612
 ngio/common/_dimensions.py,sha256=w8PYgyWxA8hgJETjFbw5CXf7WrasCL5FbzgfL1in86M,11361
-ngio/common/_masking_roi.py,sha256=2XbfwdooOseXGxb48G4DDaBFEJ3YU1oHdemazpG668c,5717
+ngio/common/_masking_roi.py,sha256=ZZTXordEZoq_ADk0OzADvq-5dPOwUBSuNobzFR8fpTw,5697
 ngio/common/_pyramid.py,sha256=Wxj8RXSWWEPm5ILqvga484Hd2j3IQ4tGzHZsL5WSOuo,8446
 ngio/common/_roi.py,sha256=9fKFTHoUiP0xmxvQiFkNmIuwWg3bFuRaAx-froCSqvA,11487
 ngio/common/_synt_images_utils.py,sha256=B6uYOW1NyrM06YMR-csca3_YnAAkPRTbvnbLdy9tk9E,3188
@@ -21,7 +21,7 @@ ngio/images/_abstract_image.py,sha256=hrB9xn4MFRxnxE1d7HKnM8SXVPUGhMD9u32yBHTsFi
 ngio/images/_create.py,sha256=61cuco2jUK25WzOY-Sel9s931FtGPL2ut25L9W10bJ4,10171
 ngio/images/_create_synt_container.py,sha256=il_rr5_2KIQ5Xsskj2rb2fEm100ZErZq89aW06kn_7k,5444
 ngio/images/_image.py,sha256=aMJb-YDghbZIHfSzY8ZoTmScEOqNfWQzJFO2AoMCdF4,33053
-ngio/images/_label.py,sha256=nFwUthWj5L4QMvYKfqKjU03OY_oRedeU5Y4cSIVo0Z0,11768
+ngio/images/_label.py,sha256=Se3ZpgXDArtLHPlx9pw8Rnr5pZ_sEkmbeMh9sU63ncg,11799
 ngio/images/_masked_image.py,sha256=YhbBzgPZMav6rX0WYue1BaxAzEIsfaQrxUIOK6ZWZcw,18848
 ngio/images/_ome_zarr_container.py,sha256=UJERXEgBkwclpLaHzWqUIQc6P-TG4zYuKuxPukJGa4Y,38433
 ngio/images/_table_ops.py,sha256=jFv_AMqoB4JBpoWsMtZppZVW7dAOC_u-JpfNm8b33kY,15292
@@ -74,12 +74,12 @@ ngio/tables/v1/_roi_table.py,sha256=b7lwjsdCSUOCMT6Lx4hwAqGBKC25Q5bdzoK3DQWnAQM,
 ngio/transforms/__init__.py,sha256=JA0-Ui7skbXkm9ofN-AEhU1FTLutkMkwTdVD-310frQ,113
 ngio/transforms/_zoom.py,sha256=otyE-vxFnywUJ8U4mHjat-bNG_7_jv62ckTpqDMxyVQ,550
 ngio/utils/__init__.py,sha256=XPYh8ehC7uXNU2cFFXZAw-S3DpWpX1Yq2xGkffZv5vI,1142
-ngio/utils/_datasets.py,sha256=6GtxfPkjutNaeg5BHuJDBP0GudvQXHLU6mmHp_o0bGA,5650
+ngio/utils/_datasets.py,sha256=YOV367skFA8nbKAqbyK0EsUU7E9UId_u5ButuLesrzk,5896
 ngio/utils/_errors.py,sha256=pKQ12LUjQLYE1nUawemA5h7HsgznjaSvV1n2PQU33N0,759
 ngio/utils/_fractal_fsspec_store.py,sha256=RdcCFOgHexRKX9zZvJV5RI-5OPc7VOPS6q_IeRxm24I,1548
 ngio/utils/_logger.py,sha256=N5W0a_xwze4blS1MolidBkTMbjTbg8GPguJZNun3mAE,1392
 ngio/utils/_zarr_utils.py,sha256=GUOcAx02IcfrJ5tIdKu8ChtRUUaBbkkddW5jaCCYnS8,13797
-ngio-0.4.7.dist-info/METADATA,sha256=c1iZJEnZdbY9MjC2hnq7fm7lORSIjhz920Z7S-P7SAI,6137
-ngio-0.4.7.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
-ngio-0.4.7.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
-ngio-0.4.7.dist-info/RECORD,,
+ngio-0.4.8.dist-info/METADATA,sha256=Z01svPND2BsHMW6i-PYzEQNiSZI-YEgvWnVHmbEZHhk,6144
+ngio-0.4.8.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
+ngio-0.4.8.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
+ngio-0.4.8.dist-info/RECORD,,