ngio 0.3.3__py3-none-any.whl → 0.3.4__py3-none-any.whl

ngio/tables/backends/__init__.py

@@ -1,7 +1,7 @@
 """Ngio Tables backend implementations."""
 
 from ngio.tables.backends._abstract_backend import AbstractTableBackend, BackendMeta
-from ngio.tables.backends._anndata import AnnDataBackend
+from ngio.tables.backends._anndata import AnnDataBackend, AnnDataBackendV1
 from ngio.tables.backends._csv import CsvTableBackend
 from ngio.tables.backends._json import JsonTableBackend
 from ngio.tables.backends._parquet import ParquetTableBackend
@@ -31,6 +31,7 @@ from ngio.tables.backends._utils import (
 __all__ = [
     "AbstractTableBackend",
     "AnnDataBackend",
+    "AnnDataBackendV1",
     "BackendMeta",
     "CsvTableBackend",
     "DefaultTableBackend",

ngio/tables/backends/_anndata.py

@@ -75,3 +75,13 @@ class AnnDataBackend(AbstractTableBackend):
             index_key=self.index_key,
         )
         self.write_from_anndata(anndata)
+
+
+
+class AnnDataBackendV1(AnnDataBackend):
+    """A wrapper for the AnnData backend that for backwards compatibility."""
+
+    @staticmethod
+    def backend_name() -> str:
+        """Return the name of the backend."""
+        return "anndata_v1"

ngio/tables/backends/_table_backends.py

@@ -7,7 +7,7 @@ from pandas import DataFrame
 from polars import DataFrame as PolarsDataFrame
 from polars import LazyFrame
 
-from ngio.tables.backends._anndata import AnnDataBackend
+from ngio.tables.backends._anndata import AnnDataBackend, AnnDataBackendV1
 from ngio.tables.backends._csv import CsvTableBackend
 from ngio.tables.backends._json import JsonTableBackend
 from ngio.tables.backends._parquet import ParquetTableBackend
@@ -213,7 +213,8 @@ class ImplementedTableBackends:
                 )
 
 
-ImplementedTableBackends().add_backend(AnnDataBackend, aliases=["anndata_v1"])
+ImplementedTableBackends().add_backend(AnnDataBackend)
+ImplementedTableBackends().add_backend(AnnDataBackendV1)
 ImplementedTableBackends().add_backend(
     JsonTableBackend, aliases=["experimental_json_v1"]
 )

{ngio-0.3.3.dist-info → ngio-0.3.4.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: ngio
-Version: 0.3.3
+Version: 0.3.4
 Summary: Next Generation file format IO
 Project-URL: homepage, https://github.com/fractal-analytics-platform/ngio
 Project-URL: repository, https://github.com/fractal-analytics-platform/ngio

{ngio-0.3.3.dist-info → ngio-0.3.4.dist-info}/RECORD

@@ -34,15 +34,15 @@ ngio/ome_zarr_meta/v04/_v04_spec_utils.py,sha256=05tEr2eEP_XVIfBMOAWLT7lzJV4KS5e
 ngio/tables/__init__.py,sha256=_BV3sclNMLITu_J8_3DkkUrCB6Kro0HzeWLDCD1ivKM,877
 ngio/tables/_abstract_table.py,sha256=rwGa47TzbFmosucBWVfFq6JEXtgGvOdUVtU9DIelV88,8204
 ngio/tables/_tables_container.py,sha256=3xmpREaN671l40MPprnl1BD-VoOb6xfjECb5mNoMW0w,12173
-ngio/tables/backends/__init__.py,sha256=nQZVazwTL1IHU08gL-BZcFZd7Cehhbc_AsJ3t3XSps0,1577
+ngio/tables/backends/__init__.py,sha256=MwSRXNF1rWQBFOTDA_vT3oGoNZpviVgytsL5Txnu08I,1619
 ngio/tables/backends/_abstract_backend.py,sha256=tsbHzSPTX88fiCbVc8khXv5aN68ck6HKG8r5OHkY3S8,7457
-ngio/tables/backends/_anndata.py,sha256=8RX2NO15CLxys3p6gw54Nd-_0WATU4WBlNndX06wvzI,2587
+ngio/tables/backends/_anndata.py,sha256=EdzGH0Zr85GBjVVBy3OxnRoDGgsi5zZLWRWpSLF2GhQ,2832
 ngio/tables/backends/_anndata_utils.py,sha256=DBWIcR0btnH-DIvDvzlcnMXoYhhtXc9DstryiOP0Qsg,3122
 ngio/tables/backends/_csv.py,sha256=Ev61D-AUKo4LIhXRmWPJgYbHI7eQdxiajQR574DevEM,932
 ngio/tables/backends/_json.py,sha256=1ZsEuXDJm1rOZV_KjFm8CB0qhv7L1W7L2EGWPf4q_p0,3137
 ngio/tables/backends/_non_zarr_backends.py,sha256=SvPPhT6n5TrKUOyV1mNcdHQK49huZ5lwR8EVe9MdydM,7254
 ngio/tables/backends/_parquet.py,sha256=ic-p86h8lce8q9luBJGRzy6vxlWyJvA0-2l5cUD6OqY,1398
-ngio/tables/backends/_table_backends.py,sha256=QUS59VU395966AEul2SNJQAzklSitvISL0wnZTKWZa0,7267
+ngio/tables/backends/_table_backends.py,sha256=56lMLrkmRS8-NTwNF0wkMzrRwTmOFLk1g_LBDA2i6wg,7318
 ngio/tables/backends/_utils.py,sha256=tJBSWN6OhO_1ybxl4vT2l3ImB028Fb6h0vaitPRcr8A,19668
 ngio/tables/v1/__init__.py,sha256=Wr1_9RZFpaN8FYMTnxT9Yjkw4AS7y9FMWailmB_uj5g,617
 ngio/tables/v1/_condition_table.py,sha256=T0Uq5BKkmMoEspt_Rx0U99Ow6S9GAMZDHqvUO5obCAM,1780
@@ -55,7 +55,7 @@ ngio/utils/_errors.py,sha256=pKQ12LUjQLYE1nUawemA5h7HsgznjaSvV1n2PQU33N0,759
 ngio/utils/_fractal_fsspec_store.py,sha256=RdcCFOgHexRKX9zZvJV5RI-5OPc7VOPS6q_IeRxm24I,1548
 ngio/utils/_logger.py,sha256=HIuqD_2ShfFGDswBddcouStbKfL0Vz_ah8cAIFGhbS8,888
 ngio/utils/_zarr_utils.py,sha256=qOI-HL2HsfFLCj_yxsTR-aq4oHpSqS9KR13aEIvhGDY,13593
-ngio-0.3.3.dist-info/METADATA,sha256=R88An5Xll3DjctQyVOwJKH7Z0DaNpefeehYOqH79FoE,5868
-ngio-0.3.3.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-ngio-0.3.3.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
-ngio-0.3.3.dist-info/RECORD,,
+ngio-0.3.4.dist-info/METADATA,sha256=CejDvwMriZ2JvTO2bLW3AA0W3zlAGmWjU10Hw20thy8,5868
+ngio-0.3.4.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
+ngio-0.3.4.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
+ngio-0.3.4.dist-info/RECORD,,