ngio 0.2.5__py3-none-any.whl → 0.2.7__py3-none-any.whl

ngio/hcs/plate.py

@@ -399,7 +399,7 @@ class OmeZarrPlate:
         acquisition_id: int | None = None,
         acquisition_name: str | None = None,
         atomic: bool = False,
-    ) -> StoreOrGroup | None:
+    ) -> str:
         """Add an image to an ome-zarr plate."""
         if image_path is not None:
             image_path = path_in_well_validation(path=image_path)
@@ -450,8 +450,8 @@ class OmeZarrPlate:
             meta_handler._group_handler.clean_cache()
 
         if image_path is not None:
-            return group_handler.get_group(image_path, create_mode=True)
-        return None
+            return f"{well_path}/{image_path}"
+        return well_path
 
     def atomic_add_image(
         self,
@@ -460,14 +460,14 @@ class OmeZarrPlate:
         image_path: str,
         acquisition_id: int | None = None,
         acquisition_name: str | None = None,
-    ) -> StoreOrGroup:
+    ) -> str:
         """Parallel safe version of add_image."""
         if image_path is None:
             raise ValueError(
                 "Image path cannot be None for atomic add_image. "
                 "If your intent is to add a well, use add_well instead."
             )
-        group = self._add_image(
+        path = self._add_image(
             row=row,
             column=column,
             image_path=image_path,
@@ -475,12 +475,7 @@ class OmeZarrPlate:
             acquisition_name=acquisition_name,
             atomic=True,
         )
-        if group is None:
-            raise ValueError(
-                f"Some error occurred while adding image {image_path} "
-                f"to well {row}{column}."
-            )
-        return group
+        return path
 
     def add_image(
         self,
@@ -489,14 +484,14 @@ class OmeZarrPlate:
         image_path: str,
         acquisition_id: int | None = None,
         acquisition_name: str | None = None,
-    ) -> StoreOrGroup:
+    ) -> str:
         """Add an image to an ome-zarr plate."""
         if image_path is None:
             raise ValueError(
                 "Image path cannot be None for atomic add_image. "
                 "If your intent is to add a well, use add_well instead."
             )
-        group = self._add_image(
+        path = self._add_image(
             row=row,
             column=column,
             image_path=image_path,
@@ -504,12 +499,7 @@ class OmeZarrPlate:
             acquisition_name=acquisition_name,
             atomic=False,
         )
-        if group is None:
-            raise ValueError(
-                f"Some error occurred while adding image {image_path} "
-                f"to well {row}{column}."
-            )
-        return group
+        return path
 
     def add_well(
         self,

ngio/ome_zarr_meta/ngio_specs/_channels.py

@@ -344,7 +344,7 @@ class ChannelsMeta(BaseModel):
             _wavelength_id = _check_elements(wavelength_id, str)
             _wavelength_id = _check_unique(wavelength_id)
 
-        _colors: Collection[str | NgioColors] = ["random"] * len(labels)
+        _colors: Collection[str | NgioColors | None] = [None] * len(labels)
         if isinstance(colors, Collection):
             _colors = _check_elements(colors, str | NgioColors)
 

{ngio-0.2.5.dist-info → ngio-0.2.7.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: ngio
-Version: 0.2.5
+Version: 0.2.7
 Summary: Next Generation file format IO
 Project-URL: homepage, https://github.com/lorenzocerrone/ngio
 Project-URL: repository, https://github.com/lorenzocerrone/ngio

{ngio-0.2.5.dist-info → ngio-0.2.7.dist-info}/RECORD

@@ -10,7 +10,7 @@ ngio/common/_roi.py,sha256=dq1iVT8-G_zWuxcYWJeHfviBSbPgsyKUcDL3Vg6jx6I,5122
 ngio/common/_slicer.py,sha256=AKpwXRncOmF9nhjKYma0C_41WqAgSv860beKGx-aw-0,3075
 ngio/common/_zoom.py,sha256=KsURa5VuixmpbAAY5-6obmuQV8vfiHKZqBxZDXvchpM,5473
 ngio/hcs/__init__.py,sha256=5oAYT_454WGhms97kxo8gS4_rKHtFf_x-9uu8M_VeVM,356
-ngio/hcs/plate.py,sha256=zmhHXRsoc4s_-bPccYCH9rqoYg419j-T-NF-OojXRZM,30509
+ngio/hcs/plate.py,sha256=WmUw8qZgWUPBBTqtV8lh_7T0vtRzMkAmduM8b969Ni4,30082
 ngio/images/__init__.py,sha256=DYbXAdBgPxyjBRdJrWvU0UnBRI0gUMmx9KaJ-Bucvz4,533
 ngio/images/abstract_image.py,sha256=8PNQPZjiDz-pcTFXSJAVw7nUr4yL_iRwqDEUTKkAnp0,10266
 ngio/images/create.py,sha256=XYn30m_2OSZeHHASYHc3eK9u_gZIYy9wo6mGdRGaq5c,9473
@@ -22,7 +22,7 @@ ngio/ome_zarr_meta/__init__.py,sha256=oZ8PEsWM7U0KwzpsnvVfX9k4UfuTz5sZ8B6B9eY5hy
 ngio/ome_zarr_meta/_meta_handlers.py,sha256=BLvYt5PONYrWkEb2XgEiAXR_OX9rfeX_C0eEqen0jQA,25549
 ngio/ome_zarr_meta/ngio_specs/__init__.py,sha256=05NQukZG0nNvjzf8AKWGu7PhjhQcImGSAOK3D3Bg-Js,1786
 ngio/ome_zarr_meta/ngio_specs/_axes.py,sha256=Kqe9T7LWa_9o3UWS5uzALyyNluIhXxWhDGxWY4-GIo8,16707
-ngio/ome_zarr_meta/ngio_specs/_channels.py,sha256=ufZuYuTO5PJA1vcBrNAcuZCMgIEwF57buPloTHIzB1Q,14082
+ngio/ome_zarr_meta/ngio_specs/_channels.py,sha256=piK_SZ1Oay2_f2Sq4BFMOadMYc2yI1itfH075qxFznc,14085
 ngio/ome_zarr_meta/ngio_specs/_dataset.py,sha256=hY8ogPPxvCgVg6k02t3zUr24lasYrvnxBd1iPEigdG4,5892
 ngio/ome_zarr_meta/ngio_specs/_ngio_hcs.py,sha256=uh345KQmEQtslIyMmLK9sB-NbjPYxi0Y9FuYIFhd3Rc,17465
 ngio/ome_zarr_meta/ngio_specs/_ngio_image.py,sha256=8E38Mgw-l0Ff1nkmCJIzo64G_paAVhM8xktUS_V5egY,17960
@@ -51,7 +51,7 @@ ngio/utils/_errors.py,sha256=pKQ12LUjQLYE1nUawemA5h7HsgznjaSvV1n2PQU33N0,759
 ngio/utils/_fractal_fsspec_store.py,sha256=7qoGLiLi8JQFh9Ej_z5WNwQQuWrujb0f6p9nj8ocsS8,548
 ngio/utils/_logger.py,sha256=HIuqD_2ShfFGDswBddcouStbKfL0Vz_ah8cAIFGhbS8,888
 ngio/utils/_zarr_utils.py,sha256=qOI-HL2HsfFLCj_yxsTR-aq4oHpSqS9KR13aEIvhGDY,13593
-ngio-0.2.5.dist-info/METADATA,sha256=CfWGOhGP41xxTqsvNvwDeA4nT2hjeMS6yMJ4xHalXqo,5215
-ngio-0.2.5.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-ngio-0.2.5.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
-ngio-0.2.5.dist-info/RECORD,,
+ngio-0.2.7.dist-info/METADATA,sha256=DI47tFwc8OP-d0nuqNHv4pSUhg15pJiU2uUDmiq9Q-U,5215
+ngio-0.2.7.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
+ngio-0.2.7.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
+ngio-0.2.7.dist-info/RECORD,,