ngio 0.2.12__py3-none-any.whl → 0.2.13__py3-none-any.whl

ngio/tables/_validators.py

@@ -1,5 +1,6 @@
 from collections.abc import Iterable
 from typing import Protocol
+from warnings import warn
 
 import pandas as pd
 
@@ -78,8 +79,9 @@ def validate_columns(
     table_header = table_df.columns
     for column in required_columns:
         if column not in table_header:
-            raise NgioTableValidationError(
-                f"Could not find required column: {column} in the table"
+            warn(
+                f"Could not find required column: {column} in the table",
+                stacklevel=2,
             )
 
     if optional_columns is None:
@@ -88,9 +90,10 @@ def validate_columns(
     possible_columns = [*required_columns, *optional_columns]
     for column in table_header:
         if column not in possible_columns:
-            raise NgioTableValidationError(
-                f"Could not find column: {column} in the list of possible columns. ",
+            warn(
+                f"Could not find column: {column} in the list of possible columns. "
                 f"Possible columns are: {possible_columns}",
+                stacklevel=2,
             )
 
     return table_df

ngio/tables/tables_container.py

@@ -156,7 +156,7 @@ def _get_table_type(handler: ZarrGroupHandler) -> str:
 def _get_table_version(handler: ZarrGroupHandler) -> str:
     """Get the version of the table from the handler."""
     attrs = handler.load_attrs()
-    return attrs.get("fractal_table_version", "None")
+    return attrs.get("fractal_table_version", "1")
 
 
 class TablesContainer:

{ngio-0.2.12.dist-info → ngio-0.2.13.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: ngio
-Version: 0.2.12
+Version: 0.2.13
 Summary: Next Generation file format IO
 Project-URL: homepage, https://github.com/lorenzocerrone/ngio
 Project-URL: repository, https://github.com/lorenzocerrone/ngio

{ngio-0.2.12.dist-info → ngio-0.2.13.dist-info}/RECORD

@@ -31,8 +31,8 @@ ngio/ome_zarr_meta/v04/__init__.py,sha256=dJRzzxyYc81kf-0Hip_bqvbdManaM8XTdQX2me
 ngio/ome_zarr_meta/v04/_custom_models.py,sha256=5GxiDERvLuvq4QvApcA6EiKLS6hLFX1R0R_9rSaa85A,530
 ngio/ome_zarr_meta/v04/_v04_spec_utils.py,sha256=05tEr2eEP_XVIfBMOAWLT7lzJV4KS5eYrpK8l94tn3w,15876
 ngio/tables/__init__.py,sha256=gxvNvAgLePgrngOm06H5qU50Axc6boeIs5iCfrmqTi0,609
-ngio/tables/_validators.py,sha256=7Eqln9j1tWmNakSCnryy2q39SbTuk6V31O2iMByTWWw,3363
-ngio/tables/tables_container.py,sha256=DFlz_6ts5p0lHkm6NMBtKZget30OicCYHrLbiG4xU1s,10188
+ngio/tables/_validators.py,sha256=Y52BY4pfGh5EX3i3sdIYZofRDP4e8xyFMcHN_Cx-xHI,3397
+ngio/tables/tables_container.py,sha256=KaIxpp6Tehes4oLdmJk0LfbdM41j3P55J6BTbsH_P70,10185
 ngio/tables/backends/__init__.py,sha256=Y9MIFefwUaSmhhv5FDZFn7jBdYXDML2FovO-uK-vxgI,936
 ngio/tables/backends/_abstract_backend.py,sha256=--4qeVHs4YRo5i5XsREmDm6BxMsQ5tIqc6XZ810GJno,8776
 ngio/tables/backends/_anndata_utils.py,sha256=DBWIcR0btnH-DIvDvzlcnMXoYhhtXc9DstryiOP0Qsg,3122
@@ -51,7 +51,7 @@ ngio/utils/_errors.py,sha256=pKQ12LUjQLYE1nUawemA5h7HsgznjaSvV1n2PQU33N0,759
 ngio/utils/_fractal_fsspec_store.py,sha256=7qoGLiLi8JQFh9Ej_z5WNwQQuWrujb0f6p9nj8ocsS8,548
 ngio/utils/_logger.py,sha256=HIuqD_2ShfFGDswBddcouStbKfL0Vz_ah8cAIFGhbS8,888
 ngio/utils/_zarr_utils.py,sha256=qOI-HL2HsfFLCj_yxsTR-aq4oHpSqS9KR13aEIvhGDY,13593
-ngio-0.2.12.dist-info/METADATA,sha256=1W9i9Rp0-TfTiPhAvug4xk-xmm6f_oybt3-rXEdjNVU,5224
-ngio-0.2.12.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-ngio-0.2.12.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
-ngio-0.2.12.dist-info/RECORD,,
+ngio-0.2.13.dist-info/METADATA,sha256=yUl31cHVoJ1ILC1NrIjUq9XXlSt3r8CHLoGotUlpCt0,5224
+ngio-0.2.13.dist-info/WHEEL,sha256=WLgqFyCfm_KASv4WHyYy0P3pM_m7J5L9k2skdKLirC8,87
+ngio-0.2.13.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
+ngio-0.2.13.dist-info/RECORD,,

{ngio-0.2.12.dist-info → ngio-0.2.13.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: hatchling 1.27.0
+Generator: hatchling 1.28.0
 Root-Is-Purelib: true
 Tag: py3-none-any