ngio 0.2.0b1__py3-none-any.whl → 0.2.0b2__py3-none-any.whl

ngio/tables/backends/_anndata_utils.py

@@ -41,6 +41,9 @@ def custom_read_zarr(
     """
     group, _ = open_group_wrapper(store=store, mode="r")
 
+    if not isinstance(group.store, zarr.DirectoryStore):
+        elem_to_read = ["X", "obs", "var"]
+
     if elem_to_read is None:
         elem_to_read = [
             "X",

{ngio-0.2.0b1.dist-info → ngio-0.2.0b2.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: ngio
-Version: 0.2.0b1
+Version: 0.2.0b2
 Summary: Next Generation file format IO
 Project-URL: homepage, https://github.com/lorenzocerrone/ngio
 Project-URL: repository, https://github.com/lorenzocerrone/ngio
@@ -41,6 +41,7 @@ Requires-Dist: rich; extra == 'dev'
 Requires-Dist: ruff; extra == 'dev'
 Requires-Dist: scikit-image; extra == 'dev'
 Provides-Extra: docs
+Requires-Dist: mike; extra == 'docs'
 Requires-Dist: mkdocs; extra == 'docs'
 Requires-Dist: mkdocs-autorefs; extra == 'docs'
 Requires-Dist: mkdocs-git-committers-plugin-2; extra == 'docs'
@@ -60,7 +61,7 @@ Description-Content-Type: text/markdown
 [![License](https://img.shields.io/pypi/l/ngio.svg?color=green)](https://github.com/lorenzocerrone/ngio/raw/main/LICENSE)
 [![PyPI](https://img.shields.io/pypi/v/ngio.svg?color=green)](https://pypi.org/project/ngio)
 [![Python Version](https://img.shields.io/pypi/pyversions/ngio.svg?color=green)](https://python.org)
-[![CI](https://github.com/lorenzocerrone/ngio/actions/workflows/ci.yml/badge.svg)](https://github.com/lorenzocerrone/ngio/actions/workflows/ci.yml)
+[![CI](https://github.com/lorenzocerrone/ngio/actions/workflows/ci.yml/badge.svg)](https://github.com/fractal-analytics-platform/ngio/actions/workflows/ci.yml)
 [![codecov](https://codecov.io/gh/fractal-analytics-platform/ngio/graph/badge.svg?token=FkmF26FZki)](https://codecov.io/gh/fractal-analytics-platform/ngio)
 
 NGIO is a Python library to streamline OME-Zarr image analysis workflows.

{ngio-0.2.0b1.dist-info → ngio-0.2.0b2.dist-info}/RECORD

@@ -34,7 +34,7 @@ ngio/tables/_validators.py,sha256=RzF09YrlUSb-xdVlosuU-_BaLswtvhpduHfzLaWu2mY,64
 ngio/tables/tables_container.py,sha256=FXp-s_zKqbMcBFh4515kbSdxYaFK1ULE2Pf0pzlnpEE,9845
 ngio/tables/backends/__init__.py,sha256=NlOXmZXDA1kOCVONUyo_aqSjdMHmfqk-3xuKBLXpaUM,217
 ngio/tables/backends/_abstract_backend.py,sha256=JlaHqLjDm2uVnXFWxsHMojNeKo3leg6uauzoFMSF5O4,2256
-ngio/tables/backends/_anndata_utils.py,sha256=TnrjOI70tSRl0bYJvVzvMSMojD61GDK3Uo8wS6EOXZg,6816
+ngio/tables/backends/_anndata_utils.py,sha256=zo85K0bwgyQKBj8hQASfOSWugdd4BPUTyT6_tRO58fI,6917
 ngio/tables/backends/_anndata_v1.py,sha256=hhEwoBybWFDHqajOk_JEazniYmhAlCehOYTtmcYJfyY,2615
 ngio/tables/backends/_json_v1.py,sha256=9ZC0d_tMiiugm-VXDL3sRFfESzSnnY9kAtSxoXYV-dY,1910
 ngio/tables/backends/_table_backends.py,sha256=XXtnZqVDbMqFkbUkHbf9IBNz4teCouLpa5fWgEgVtfg,3269
@@ -48,7 +48,7 @@ ngio/utils/_errors.py,sha256=pKQ12LUjQLYE1nUawemA5h7HsgznjaSvV1n2PQU33N0,759
 ngio/utils/_fractal_fsspec_store.py,sha256=7qoGLiLi8JQFh9Ej_z5WNwQQuWrujb0f6p9nj8ocsS8,548
 ngio/utils/_logger.py,sha256=HIuqD_2ShfFGDswBddcouStbKfL0Vz_ah8cAIFGhbS8,888
 ngio/utils/_zarr_utils.py,sha256=r075cNpr-JHZ1PaDHX1KlENIGMvLf-WTTYwpODACWm4,12924
-ngio-0.2.0b1.dist-info/METADATA,sha256=J-tCuj8BXolhGSU57DFUkgm3dvFkyQq9JQy5MrXznTs,4933
-ngio-0.2.0b1.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-ngio-0.2.0b1.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
-ngio-0.2.0b1.dist-info/RECORD,,
+ngio-0.2.0b2.dist-info/METADATA,sha256=SodMO8zwsdyChCR4SG_Om5K2LkxGGEt9Ud14pMzVGQI,4982
+ngio-0.2.0b2.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
+ngio-0.2.0b2.dist-info/licenses/LICENSE,sha256=UgN_a1QCeNh9rZWfz-wORQFxE3elQzLWPQaoK6N6fxQ,1502
+ngio-0.2.0b2.dist-info/RECORD,,