nettracer3d 1.0.7__py3-none-any.whl → 1.0.9__py3-none-any.whl
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- nettracer3d/morphology.py +108 -17
- nettracer3d/nettracer.py +64 -14
- nettracer3d/nettracer_gui.py +480 -180
- nettracer3d/segmenter.py +67 -25
- nettracer3d/segmenter_GPU.py +67 -29
- nettracer3d/stats.py +861 -0
- {nettracer3d-1.0.7.dist-info → nettracer3d-1.0.9.dist-info}/METADATA +6 -4
- {nettracer3d-1.0.7.dist-info → nettracer3d-1.0.9.dist-info}/RECORD +12 -11
- {nettracer3d-1.0.7.dist-info → nettracer3d-1.0.9.dist-info}/WHEEL +0 -0
- {nettracer3d-1.0.7.dist-info → nettracer3d-1.0.9.dist-info}/entry_points.txt +0 -0
- {nettracer3d-1.0.7.dist-info → nettracer3d-1.0.9.dist-info}/licenses/LICENSE +0 -0
- {nettracer3d-1.0.7.dist-info → nettracer3d-1.0.9.dist-info}/top_level.txt +0 -0
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Metadata-Version: 2.4
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Name: nettracer3d
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Version: 1.0.
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Version: 1.0.9
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Summary: Scripts for intializing and analyzing networks from segmentations of three dimensional images.
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Author-email: Liam McLaughlin <liamm@wustl.edu>
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Project-URL: Documentation, https://nettracer3d.readthedocs.io/en/latest/
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@@ -110,7 +110,9 @@ McLaughlin, L., Zhang, B., Sharma, S. et al. Three dimensional multiscalar neuro
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NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
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-- Version 1.0.
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-- Version 1.0.9 Updates --
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*
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* Added
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* Some bug fixes
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* Added ability to load a full sized highlight overlay from the file menu (in case you need it for a picture - on big images the highlight overlay is computed by slice so if you reload the channel its trying to highlight, it will alter the highlight overlay, but loading in the entire highlight overlay directly will stop this behavior until a new highlight is generated).
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* For the 'calculate edge < > node interaction' method - now can compute the length of nearby edges as an alternative option to just the volumes.
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* Added ability to select all nodes/edges participating in the network.
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@@ -3,23 +3,24 @@ nettracer3d/cellpose_manager.py,sha256=NfRqW6Zl7yRU4qHCS_KjmR0R6QANSSgCO0_dr-eiv
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nettracer3d/community_extractor.py,sha256=rPXXWwMX05mfD_ogULEouLy8CST-aOaoSw45NhloKVg,31754
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nettracer3d/excelotron.py,sha256=aNof6k-DgMxVyFgsl3ltSCxG4vZW49cuvCBzfzhYhUY,75072
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nettracer3d/modularity.py,sha256=pborVcDBvICB2-g8lNoSVZbIReIBlfeBmjFbPYmtq7Y,22443
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nettracer3d/morphology.py,sha256=
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nettracer3d/morphology.py,sha256=yYMeV8DRZXJhFSm4bI3VYA562AG2dlp2sqqnnNazqtQ,23128
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nettracer3d/neighborhoods.py,sha256=lh4_zuTwgTq-u8VHy72buBfZf58FEJo9sH3IIBuZr68,52735
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nettracer3d/nettracer.py,sha256=
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nettracer3d/nettracer_gui.py,sha256=
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nettracer3d/nettracer.py,sha256=GM5laE2pgxCLWxj4MOEMv2ItWoUWGTzxoGWzxn1hQ-U,277673
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nettracer3d/nettracer_gui.py,sha256=MZYaCuf5dX_Zv4H-A5CE-O60uc2z2_jmgwMMxvw680E,683698
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nettracer3d/network_analysis.py,sha256=kBzsVaq4dZkMe0k-VGvQIUvM-tK0ZZ8bvb-wtsugZRQ,46150
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nettracer3d/network_draw.py,sha256=F7fw6Pcf4qWOhdKwLmhwqWdschbDlHzwCVolQC9imeU,14117
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nettracer3d/node_draw.py,sha256=kZcR1PekLg0riioNeGcALIXQyZ5PtHA_9MT6z7Zovdk,10401
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nettracer3d/painting.py,sha256=K_dwngivw80r-Yyg4btKMsWGn566ZE9PnrQl986uxJE,23497
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nettracer3d/proximity.py,sha256=WaHPwE6ypeInFO_LnMT0zaVE53jX3TJx6h7nmtYtr8U,41824
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nettracer3d/run.py,sha256=xYeaAc8FCx8MuzTGyL3NR3mK7WZzffAYAH23bNRZYO4,127
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nettracer3d/segmenter.py,sha256=
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nettracer3d/segmenter_GPU.py,sha256=
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nettracer3d/segmenter.py,sha256=20ch_uLqedV9srwT1eL5eFs88ojkb2gELWJKgtYk2qk,72791
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nettracer3d/segmenter_GPU.py,sha256=FwzevixleTUoRmwVa8jPPzW82RZoC6nL2eEeZ4-2ZR8,80015
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nettracer3d/simple_network.py,sha256=dkG4jpc4zzdeuoaQobgGfL3PNo6N8dGKQ5hEEubFIvA,9947
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nettracer3d/smart_dilate.py,sha256=TvRUh6B4q4zIdCO1BWH-xgTdND5OUNmo99eyxG9oIAU,27145
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nettracer3d
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nettracer3d-1.0.
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nettracer3d-1.0.
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nettracer3d-1.0.
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nettracer3d-1.0.
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nettracer3d-1.0.
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nettracer3d/stats.py,sha256=0YwrVLeEvll3PlbL5-0_9dstldr48PvxJrQm-PiC8jY,36607
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nettracer3d-1.0.9.dist-info/licenses/LICENSE,sha256=jnNT-yBeIAKAHpYthPvLeqCzJ6nSurgnKmloVnfsjCI,764
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nettracer3d-1.0.9.dist-info/METADATA,sha256=fIu4scBXcOaG4VO_OEfbPFAHyJmug8cunf4L3LYGGsY,7588
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nettracer3d-1.0.9.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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nettracer3d-1.0.9.dist-info/entry_points.txt,sha256=Nx1rr_0QhJXDBHAQg2vcqCzLMKBzSHfwy3xwGkueVyc,53
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nettracer3d-1.0.9.dist-info/top_level.txt,sha256=zsYy9rZwirfCEOubolhee4TyzqBAL5gSUeFMzhFTX8c,12
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nettracer3d-1.0.9.dist-info/RECORD,,
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File without changes
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File without changes
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File without changes
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File without changes
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