nettracer3d 0.8.9__py3-none-any.whl → 0.9.1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: nettracer3d
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- Version: 0.8.9
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+ Version: 0.9.1
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  Summary: Scripts for intializing and analyzing networks from segmentations of three dimensional images.
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  Author-email: Liam McLaughlin <liamm@wustl.edu>
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  Project-URL: Documentation, https://nettracer3d.readthedocs.io/en/latest/
@@ -110,6 +110,9 @@ McLaughlin, L., Zhang, B., Sharma, S. et al. Three dimensional multiscalar neuro
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  NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
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- -- Version 0.8.9 Updates --
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-
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- * See Documentation Once Updated
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+ -- Version 0.9.1 Updates --
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+ * Adjusted the segment by 3D function to now show the 3D chunks in the preview mode. Previously it showed 2D segmentations in the preview which finished the current plane faster but didn't show accurate training data.
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+ * Adjusted the neighborhood heatmap predicted range value to now just simulate a uniform distribution rather than trying to use a mathematical algorithm.
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+ * The image display window now uses image pyramids and cropping for zoom ins so it should run a lot faster on bigger images.
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+ * The community UMAP can now color them by neighborhood.
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+ * No longer zooms all the way out by default with right click in zoom mode. Now user needs to Shift + Right Click.
@@ -0,0 +1,25 @@
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+ nettracer3d/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ nettracer3d/cellpose_manager.py,sha256=NfRqW6Zl7yRU4qHCS_KjmR0R6QANSSgCO0_dr-eivxg,6694
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+ nettracer3d/community_extractor.py,sha256=QG2v2y9lKb07LRU0zXCAlA_z-96BNqLHh5xP17KLmYA,28147
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+ nettracer3d/excelotron.py,sha256=X9v_mte8gJBPNGdj6NJNUYja0Z6eorVoKAFx4nHiMnU,72058
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+ nettracer3d/modularity.py,sha256=pborVcDBvICB2-g8lNoSVZbIReIBlfeBmjFbPYmtq7Y,22443
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+ nettracer3d/morphology.py,sha256=jyDjYzrZ4LvI5jOyw8DLsxmo-i5lpqHsejYpW7Tq7Mo,19786
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+ nettracer3d/neighborhoods.py,sha256=iIaHU1COIdRtzRpAuIQKfLGLNKYFK3dL8Vb_EeJIlEA,46459
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+ nettracer3d/nettracer.py,sha256=PBlvgCI65pwhMjTBuDl5CnHtv7unU8PMkyGt3Mz_a30,264443
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+ nettracer3d/nettracer_gui.py,sha256=FAujKFBa9ukldWTxnnLjnIeK7mEBAKkKaN0Plu_zmJM,581332
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+ nettracer3d/network_analysis.py,sha256=kBzsVaq4dZkMe0k-VGvQIUvM-tK0ZZ8bvb-wtsugZRQ,46150
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+ nettracer3d/network_draw.py,sha256=F7fw6Pcf4qWOhdKwLmhwqWdschbDlHzwCVolQC9imeU,14117
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+ nettracer3d/node_draw.py,sha256=kZcR1PekLg0riioNeGcALIXQyZ5PtHA_9MT6z7Zovdk,10401
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+ nettracer3d/painting.py,sha256=K_dwngivw80r-Yyg4btKMsWGn566ZE9PnrQl986uxJE,23497
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+ nettracer3d/proximity.py,sha256=ZCfthYpQbDBwXBcVioxyzgO9PZACu6mQ8pSXdldP1TM,38592
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+ nettracer3d/run.py,sha256=xYeaAc8FCx8MuzTGyL3NR3mK7WZzffAYAH23bNRZYO4,127
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+ nettracer3d/segmenter.py,sha256=-Llkhp3TlAIBXZNhcfMFQRdg0vec1xtlOm0c4_bSU9U,75761
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+ nettracer3d/segmenter_GPU.py,sha256=optCZ_zLIfe99rgqmyKWUZlWW5TF5jEC_C3keu1m7VQ,77771
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+ nettracer3d/simple_network.py,sha256=dkG4jpc4zzdeuoaQobgGfL3PNo6N8dGKQ5hEEubFIvA,9947
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+ nettracer3d/smart_dilate.py,sha256=TvRUh6B4q4zIdCO1BWH-xgTdND5OUNmo99eyxG9oIAU,27145
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+ nettracer3d-0.9.1.dist-info/licenses/LICENSE,sha256=jnNT-yBeIAKAHpYthPvLeqCzJ6nSurgnKmloVnfsjCI,764
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+ nettracer3d-0.9.1.dist-info/METADATA,sha256=hxlpW2z8rEEpXQvCUtW2VwVniPfxLoH1XmJhAy6ZkKw,7650
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+ nettracer3d-0.9.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ nettracer3d-0.9.1.dist-info/entry_points.txt,sha256=Nx1rr_0QhJXDBHAQg2vcqCzLMKBzSHfwy3xwGkueVyc,53
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+ nettracer3d-0.9.1.dist-info/top_level.txt,sha256=zsYy9rZwirfCEOubolhee4TyzqBAL5gSUeFMzhFTX8c,12
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+ nettracer3d-0.9.1.dist-info/RECORD,,
@@ -1,25 +0,0 @@
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- nettracer3d/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- nettracer3d/cellpose_manager.py,sha256=qZpTxSkmPb38Pru8TmjJ88xxcD_wM02EfJB5Mw9Xx4Y,6021
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- nettracer3d/community_extractor.py,sha256=QG2v2y9lKb07LRU0zXCAlA_z-96BNqLHh5xP17KLmYA,28147
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- nettracer3d/excelotron.py,sha256=X9v_mte8gJBPNGdj6NJNUYja0Z6eorVoKAFx4nHiMnU,72058
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- nettracer3d/modularity.py,sha256=O9OeKbjD3v6gSFz9K2GzP6LsxlpQaPfeJbM1pyIEigw,21788
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- nettracer3d/morphology.py,sha256=jyDjYzrZ4LvI5jOyw8DLsxmo-i5lpqHsejYpW7Tq7Mo,19786
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- nettracer3d/neighborhoods.py,sha256=VWubD5CBu9aNPhUea7FbAk9aTOq0FLKR9y-1VT7YkAc,39677
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- nettracer3d/nettracer.py,sha256=TEV-nDmkcGP3UjWEor1LtEwm5mFBQu2nB0VRyz9Lt08,253649
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- nettracer3d/nettracer_gui.py,sha256=aYU4r8HLLNiKPOpQIjdvRu2BRtvx18Z6OXa8N7g27Xg,546298
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- nettracer3d/network_analysis.py,sha256=kBzsVaq4dZkMe0k-VGvQIUvM-tK0ZZ8bvb-wtsugZRQ,46150
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- nettracer3d/network_draw.py,sha256=F7fw6Pcf4qWOhdKwLmhwqWdschbDlHzwCVolQC9imeU,14117
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- nettracer3d/node_draw.py,sha256=kZcR1PekLg0riioNeGcALIXQyZ5PtHA_9MT6z7Zovdk,10401
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- nettracer3d/painting.py,sha256=K_dwngivw80r-Yyg4btKMsWGn566ZE9PnrQl986uxJE,23497
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- nettracer3d/proximity.py,sha256=bTaucn_InQ-v1GIk8ug-dXvDhIO59rnBMl5nIwAmNyw,35335
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- nettracer3d/run.py,sha256=xYeaAc8FCx8MuzTGyL3NR3mK7WZzffAYAH23bNRZYO4,127
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- nettracer3d/segmenter.py,sha256=_ZBLe2eqV9c5yxuyfN69XR5mBoc_OD-CZjwdTCUV0YQ,67045
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- nettracer3d/segmenter_GPU.py,sha256=SGOsy8tSRlxAnD1OrJmjhiQ3k6CWiUFZZdrN6pkkgeU,69057
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- nettracer3d/simple_network.py,sha256=dkG4jpc4zzdeuoaQobgGfL3PNo6N8dGKQ5hEEubFIvA,9947
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- nettracer3d/smart_dilate.py,sha256=TvRUh6B4q4zIdCO1BWH-xgTdND5OUNmo99eyxG9oIAU,27145
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- nettracer3d-0.8.9.dist-info/licenses/LICENSE,sha256=jnNT-yBeIAKAHpYthPvLeqCzJ6nSurgnKmloVnfsjCI,764
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- nettracer3d-0.8.9.dist-info/METADATA,sha256=3aV3Pcj-2AmQzzRkI5crBVw_ZbsLW8I_kV5WiebYKws,7008
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- nettracer3d-0.8.9.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- nettracer3d-0.8.9.dist-info/entry_points.txt,sha256=Nx1rr_0QhJXDBHAQg2vcqCzLMKBzSHfwy3xwGkueVyc,53
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- nettracer3d-0.8.9.dist-info/top_level.txt,sha256=zsYy9rZwirfCEOubolhee4TyzqBAL5gSUeFMzhFTX8c,12
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- nettracer3d-0.8.9.dist-info/RECORD,,