neo4j-viz 0.3.1__py3-none-any.whl → 0.4.0__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
neo4j_viz/__init__.py CHANGED
@@ -1,6 +1,25 @@
1
1
  from .node import Node
2
- from .options import CaptionAlignment, Layout, Renderer
2
+ from .options import (
3
+ CaptionAlignment,
4
+ Direction,
5
+ ForceDirectedLayoutOptions,
6
+ HierarchicalLayoutOptions,
7
+ Layout,
8
+ Packing,
9
+ Renderer,
10
+ )
3
11
  from .relationship import Relationship
4
12
  from .visualization_graph import VisualizationGraph
5
13
 
6
- __all__ = ["VisualizationGraph", "Node", "Relationship", "CaptionAlignment", "Layout", "Renderer"]
14
+ __all__ = [
15
+ "VisualizationGraph",
16
+ "Node",
17
+ "Relationship",
18
+ "CaptionAlignment",
19
+ "Layout",
20
+ "Renderer",
21
+ "ForceDirectedLayoutOptions",
22
+ "HierarchicalLayoutOptions",
23
+ "Direction",
24
+ "Packing",
25
+ ]
neo4j_viz/gds.py CHANGED
@@ -2,15 +2,17 @@ from __future__ import annotations
2
2
 
3
3
  from itertools import chain
4
4
  from typing import Optional
5
+ from uuid import uuid4
5
6
 
6
7
  import pandas as pd
7
8
  from graphdatascience import Graph, GraphDataScience
9
+ from pandas import Series
8
10
 
9
11
  from .pandas import _from_dfs
10
12
  from .visualization_graph import VisualizationGraph
11
13
 
12
14
 
13
- def _node_dfs(
15
+ def _fetch_node_dfs(
14
16
  gds: GraphDataScience, G: Graph, node_properties: list[str], node_labels: list[str]
15
17
  ) -> dict[str, pd.DataFrame]:
16
18
  return {
@@ -21,7 +23,21 @@ def _node_dfs(
21
23
  }
22
24
 
23
25
 
24
- def _rel_df(gds: GraphDataScience, G: Graph) -> pd.DataFrame:
26
+ def _fetch_rel_df(gds: GraphDataScience, G: Graph) -> pd.DataFrame:
27
+ relationship_properties = G.relationship_properties()
28
+ assert isinstance(relationship_properties, Series)
29
+
30
+ relationship_properties_per_type = relationship_properties.tolist()
31
+ property_set: set[str] = set()
32
+ for props in relationship_properties_per_type:
33
+ if props:
34
+ property_set.update(props)
35
+
36
+ if len(property_set) > 0:
37
+ return gds.graph.relationshipProperties.stream(
38
+ G, relationship_properties=list(property_set), separate_property_columns=True
39
+ )
40
+
25
41
  return gds.graph.relationships.stream(G)
26
42
 
27
43
 
@@ -31,6 +47,7 @@ def from_gds(
31
47
  size_property: Optional[str] = None,
32
48
  additional_node_properties: Optional[list[str]] = None,
33
49
  node_radius_min_max: Optional[tuple[float, float]] = (3, 60),
50
+ max_node_count: int = 10_000,
34
51
  ) -> VisualizationGraph:
35
52
  """
36
53
  Create a VisualizationGraph from a GraphDataScience object and a Graph object.
@@ -49,10 +66,14 @@ def from_gds(
49
66
  size_property : str, optional
50
67
  Property to use for node size, by default None.
51
68
  additional_node_properties : list[str], optional
52
- Additional properties to include in the visualization node, by default None. They can be used later for modifying the node appearance.
69
+ Additional properties to include in the visualization node, by default None which means that all node
70
+ properties will be fetched.
53
71
  node_radius_min_max : tuple[float, float], optional
54
72
  Minimum and maximum node radius, by default (3, 60).
55
73
  To avoid tiny or huge nodes in the visualization, the node sizes are scaled to fit in the given range.
74
+ max_node_count : int, optional
75
+ The maximum number of nodes to fetch from the graph. The graph will be sampled using random walk with restarts
76
+ if its node count exceeds this number.
56
77
  """
57
78
  node_properties_from_gds = G.node_properties()
58
79
  assert isinstance(node_properties_from_gds, pd.Series)
@@ -61,7 +82,9 @@ def from_gds(
61
82
  if size_property is not None and size_property not in actual_node_properties:
62
83
  raise ValueError(f"There is no node property '{size_property}' in graph '{G.name()}'")
63
84
 
64
- if additional_node_properties is not None:
85
+ if additional_node_properties is None:
86
+ additional_node_properties = actual_node_properties
87
+ else:
65
88
  for prop in additional_node_properties:
66
89
  if prop not in actual_node_properties:
67
90
  raise ValueError(f"There is no node property '{prop}' in graph '{G.name()}'")
@@ -69,14 +92,40 @@ def from_gds(
69
92
  node_properties = set()
70
93
  if additional_node_properties is not None:
71
94
  node_properties.update(additional_node_properties)
72
-
73
95
  if size_property is not None:
74
96
  node_properties.add(size_property)
75
-
76
97
  node_properties = list(node_properties)
77
- node_dfs = _node_dfs(gds, G, node_properties, G.node_labels())
98
+
99
+ node_count = G.node_count()
100
+ if node_count > max_node_count:
101
+ sampling_ratio = float(max_node_count) / node_count
102
+ sample_name = f"neo4j-viz_sample_{uuid4()}"
103
+ G_fetched, _ = gds.graph.sample.rwr(sample_name, G, samplingRatio=sampling_ratio, nodeLabelStratification=True)
104
+ else:
105
+ G_fetched = G
106
+
107
+ property_name = None
108
+ try:
109
+ # Since GDS does not allow us to only fetch node IDs, we add the degree property
110
+ # as a temporary property to ensure that we have at least one property to fetch
111
+ if len(actual_node_properties) == 0:
112
+ property_name = f"neo4j-viz_property_{uuid4()}"
113
+ gds.degree.mutate(G_fetched, mutateProperty=property_name)
114
+ node_properties = [property_name]
115
+
116
+ node_dfs = _fetch_node_dfs(gds, G_fetched, node_properties, G_fetched.node_labels())
117
+ rel_df = _fetch_rel_df(gds, G_fetched)
118
+ finally:
119
+ if G_fetched.name() != G.name():
120
+ G_fetched.drop()
121
+ elif property_name is not None:
122
+ gds.graph.nodeProperties.drop(G_fetched, node_properties=[property_name])
123
+
78
124
  for df in node_dfs.values():
79
125
  df.rename(columns={"nodeId": "id"}, inplace=True)
126
+ if property_name is not None and property_name in df.columns:
127
+ df.drop(columns=[property_name], inplace=True)
128
+ rel_df.rename(columns={"sourceNodeId": "source", "targetNodeId": "target"}, inplace=True)
80
129
 
81
130
  node_props_df = pd.concat(node_dfs.values(), ignore_index=True, axis=0).drop_duplicates()
82
131
  if size_property is not None:
@@ -89,12 +138,21 @@ def from_gds(
89
138
  df.rename(columns={"labels": "__labels"}, inplace=True)
90
139
  df["labels"] = lbl
91
140
 
92
- node_lbls_df = pd.concat([df[["id", "labels"]] for df in node_dfs.values()], ignore_index=True, axis=0)
93
- node_lbls_df = node_lbls_df.groupby("id").agg({"labels": list})
141
+ node_labels_df = pd.concat([df[["id", "labels"]] for df in node_dfs.values()], ignore_index=True, axis=0)
142
+ node_labels_df = node_labels_df.groupby("id").agg({"labels": list})
94
143
 
95
- node_df = node_props_df.merge(node_lbls_df, on="id")
144
+ node_df = node_props_df.merge(node_labels_df, on="id")
96
145
 
97
- rel_df = _rel_df(gds, G)
98
- rel_df.rename(columns={"sourceNodeId": "source", "targetNodeId": "target"}, inplace=True)
146
+ if "caption" not in actual_node_properties:
147
+ node_df["caption"] = node_df["labels"].astype(str)
99
148
 
100
- return _from_dfs(node_df, rel_df, node_radius_min_max=node_radius_min_max, rename_properties={"__size": "size"})
149
+ try:
150
+ return _from_dfs(node_df, rel_df, node_radius_min_max=node_radius_min_max, rename_properties={"__size": "size"})
151
+ except ValueError as e:
152
+ err_msg = str(e)
153
+ if "column" in err_msg:
154
+ err_msg = err_msg.replace("column", "property")
155
+ if ("'size'" in err_msg) and (size_property is not None):
156
+ err_msg = err_msg.replace("'size'", f"'{size_property}'")
157
+ raise ValueError(err_msg)
158
+ raise e
neo4j_viz/gql_create.py CHANGED
@@ -2,6 +2,8 @@ import re
2
2
  import uuid
3
3
  from typing import Any, Optional
4
4
 
5
+ from pydantic import BaseModel, ValidationError
6
+
5
7
  from neo4j_viz import Node, Relationship, VisualizationGraph
6
8
 
7
9
 
@@ -252,6 +254,20 @@ def from_gql_create(
252
254
  node_top_level_keys = Node.all_validation_aliases(exempted_fields=["id"])
253
255
  rel_top_level_keys = Relationship.all_validation_aliases(exempted_fields=["id", "source", "target"])
254
256
 
257
+ def _parse_validation_error(e: ValidationError, entity_type: type[BaseModel]) -> None:
258
+ for err in e.errors():
259
+ loc = err["loc"][0]
260
+ if (loc == "size") and size_property is not None:
261
+ loc = size_property
262
+ if loc == "caption":
263
+ if (entity_type == Node) and (node_caption is not None):
264
+ loc = node_caption
265
+ elif (entity_type == Relationship) and (relationship_caption is not None):
266
+ loc = relationship_caption
267
+ raise ValueError(
268
+ f"Error for {entity_type.__name__.lower()} property '{loc}' with provided input '{err['input']}'. Reason: {err['msg']}"
269
+ )
270
+
255
271
  nodes = []
256
272
  relationships = []
257
273
  alias_to_id = {}
@@ -267,7 +283,10 @@ def from_gql_create(
267
283
  anonymous_count += 1
268
284
  if alias not in alias_to_id:
269
285
  alias_to_id[alias] = str(uuid.uuid4())
270
- nodes.append(Node(id=alias_to_id[alias], **top_level, properties=props))
286
+ try:
287
+ nodes.append(Node(id=alias_to_id[alias], **top_level, properties=props))
288
+ except ValidationError as e:
289
+ _parse_validation_error(e, Node)
271
290
 
272
291
  continue
273
292
 
@@ -283,7 +302,10 @@ def from_gql_create(
283
302
  anonymous_count += 1
284
303
  if left_alias not in alias_to_id:
285
304
  alias_to_id[left_alias] = str(uuid.uuid4())
286
- nodes.append(Node(id=alias_to_id[left_alias], **left_top_level, properties=left_props))
305
+ try:
306
+ nodes.append(Node(id=alias_to_id[left_alias], **left_top_level, properties=left_props))
307
+ except ValidationError as e:
308
+ _parse_validation_error(e, Node)
287
309
  elif left_alias not in alias_to_id:
288
310
  snippet = _get_snippet(query, query.index(left_node))
289
311
  raise ValueError(f"Relationship references unknown node alias: '{left_alias}' near: `{snippet}`.")
@@ -295,7 +317,10 @@ def from_gql_create(
295
317
  anonymous_count += 1
296
318
  if right_alias not in alias_to_id:
297
319
  alias_to_id[right_alias] = str(uuid.uuid4())
298
- nodes.append(Node(id=alias_to_id[right_alias], **right_top_level, properties=right_props))
320
+ try:
321
+ nodes.append(Node(id=alias_to_id[right_alias], **right_top_level, properties=right_props))
322
+ except ValidationError as e:
323
+ _parse_validation_error(e, Node)
299
324
  elif right_alias not in alias_to_id:
300
325
  snippet = _get_snippet(query, query.index(right_node))
301
326
  raise ValueError(f"Relationship references unknown node alias: '{right_alias}' near: `{snippet}`.")
@@ -313,15 +338,20 @@ def from_gql_create(
313
338
  if "type" in props:
314
339
  props["__type"] = props["type"]
315
340
  props["type"] = rel_type
316
- relationships.append(
317
- Relationship(
318
- id=rel_id,
319
- source=alias_to_id[left_alias],
320
- target=alias_to_id[right_alias],
321
- **top_level,
322
- properties=props,
341
+
342
+ try:
343
+ relationships.append(
344
+ Relationship(
345
+ id=rel_id,
346
+ source=alias_to_id[left_alias],
347
+ target=alias_to_id[right_alias],
348
+ **top_level,
349
+ properties=props,
350
+ )
323
351
  )
324
- )
352
+ except ValidationError as e:
353
+ _parse_validation_error(e, Relationship)
354
+
325
355
  continue
326
356
 
327
357
  snippet = part[:30]
@@ -346,6 +376,10 @@ def from_gql_create(
346
376
 
347
377
  VG = VisualizationGraph(nodes=nodes, relationships=relationships)
348
378
  if (node_radius_min_max is not None) and (size_property is not None):
349
- VG.resize_nodes(node_radius_min_max=node_radius_min_max)
379
+ try:
380
+ VG.resize_nodes(node_radius_min_max=node_radius_min_max)
381
+ except TypeError:
382
+ loc = "size" if size_property is None else size_property
383
+ raise ValueError(f"Error for node property '{loc}'. Reason: must be a numerical value")
350
384
 
351
385
  return VG
neo4j_viz/neo4j.py CHANGED
@@ -4,12 +4,21 @@ from typing import Optional, Union
4
4
 
5
5
  import neo4j.graph
6
6
  from neo4j import Result
7
+ from pydantic import BaseModel, ValidationError
7
8
 
8
9
  from neo4j_viz.node import Node
9
10
  from neo4j_viz.relationship import Relationship
10
11
  from neo4j_viz.visualization_graph import VisualizationGraph
11
12
 
12
13
 
14
+ def _parse_validation_error(e: ValidationError, entity_type: type[BaseModel]) -> None:
15
+ for err in e.errors():
16
+ loc = err["loc"][0]
17
+ raise ValueError(
18
+ f"Error for {entity_type.__name__.lower()} property '{loc}' with provided input '{err['input']}'. Reason: {err['msg']}"
19
+ )
20
+
21
+
13
22
  def from_neo4j(
14
23
  result: Union[neo4j.graph.Graph, Result],
15
24
  size_property: Optional[str] = None,
@@ -50,14 +59,30 @@ def from_neo4j(
50
59
  all_node_field_aliases = Node.all_validation_aliases()
51
60
  all_rel_field_aliases = Relationship.all_validation_aliases()
52
61
 
53
- nodes = [
54
- _map_node(node, all_node_field_aliases, size_property, caption_property=node_caption) for node in graph.nodes
55
- ]
62
+ try:
63
+ nodes = [
64
+ _map_node(node, all_node_field_aliases, size_property, caption_property=node_caption)
65
+ for node in graph.nodes
66
+ ]
67
+ except ValueError as e:
68
+ err_msg = str(e)
69
+ if ("'size'" in err_msg) and (size_property is not None):
70
+ err_msg = err_msg.replace("'size'", f"'{size_property}'")
71
+ elif ("'caption'" in err_msg) and (node_caption is not None):
72
+ err_msg = err_msg.replace("'caption'", f"'{node_caption}'")
73
+ raise ValueError(err_msg)
74
+
56
75
  relationships = []
57
- for rel in graph.relationships:
58
- mapped_rel = _map_relationship(rel, all_rel_field_aliases, caption_property=relationship_caption)
59
- if mapped_rel:
60
- relationships.append(mapped_rel)
76
+ try:
77
+ for rel in graph.relationships:
78
+ mapped_rel = _map_relationship(rel, all_rel_field_aliases, caption_property=relationship_caption)
79
+ if mapped_rel:
80
+ relationships.append(mapped_rel)
81
+ except ValueError as e:
82
+ err_msg = str(e)
83
+ if ("'caption'" in err_msg) and (relationship_caption is not None):
84
+ err_msg = err_msg.replace("'caption'", f"'{relationship_caption}'")
85
+ raise ValueError(err_msg)
61
86
 
62
87
  VG = VisualizationGraph(nodes, relationships)
63
88
 
@@ -102,7 +127,12 @@ def _map_node(
102
127
  properties["__labels"] = properties["labels"]
103
128
  properties["labels"] = labels
104
129
 
105
- return Node(**top_level_fields, properties=properties)
130
+ try:
131
+ viz_node = Node(**top_level_fields, properties=properties)
132
+ except ValidationError as e:
133
+ _parse_validation_error(e, Node)
134
+
135
+ return viz_node
106
136
 
107
137
 
108
138
  def _map_relationship(
@@ -135,4 +165,9 @@ def _map_relationship(
135
165
  properties["__type"] = properties["type"]
136
166
  properties["type"] = rel.type
137
167
 
138
- return Relationship(**top_level_fields, properties=properties)
168
+ try:
169
+ viz_rel = Relationship(**top_level_fields, properties=properties)
170
+ except ValidationError as e:
171
+ _parse_validation_error(e, Relationship)
172
+
173
+ return viz_rel
neo4j_viz/options.py CHANGED
@@ -2,10 +2,10 @@ from __future__ import annotations
2
2
 
3
3
  import warnings
4
4
  from enum import Enum
5
- from typing import Any, Optional
5
+ from typing import Any, Optional, Union
6
6
 
7
7
  import enum_tools.documentation
8
- from pydantic import BaseModel, Field
8
+ from pydantic import BaseModel, Field, ValidationError, model_validator
9
9
 
10
10
 
11
11
  @enum_tools.documentation.document_enum
@@ -33,6 +33,69 @@ class Layout(str, Enum):
33
33
  GRID = "grid"
34
34
 
35
35
 
36
+ @enum_tools.documentation.document_enum
37
+ class Direction(str, Enum):
38
+ """
39
+ The direction in which the layout should be oriented
40
+ """
41
+
42
+ LEFT = "left"
43
+ RIGHT = "right"
44
+ UP = "up"
45
+ DOWN = "down"
46
+
47
+
48
+ @enum_tools.documentation.document_enum
49
+ class Packing(str, Enum):
50
+ """
51
+ The packing method to be used
52
+ """
53
+
54
+ BIN = "bin"
55
+ STACK = "stack"
56
+
57
+
58
+ class HierarchicalLayoutOptions(BaseModel, extra="forbid"):
59
+ """
60
+ The options for the hierarchical layout.
61
+ """
62
+
63
+ direction: Optional[Direction] = None
64
+ packaging: Optional[Packing] = None
65
+
66
+
67
+ class ForceDirectedLayoutOptions(BaseModel, extra="forbid"):
68
+ """
69
+ The options for the force-directed layout.
70
+ """
71
+
72
+ gravity: Optional[float] = None
73
+ simulationStopVelocity: Optional[float] = None
74
+
75
+
76
+ LayoutOptions = Union[HierarchicalLayoutOptions, ForceDirectedLayoutOptions]
77
+
78
+
79
+ def construct_layout_options(layout: Layout, options: dict[str, Any]) -> Optional[LayoutOptions]:
80
+ if not options:
81
+ return None
82
+
83
+ if layout == Layout.FORCE_DIRECTED:
84
+ try:
85
+ return ForceDirectedLayoutOptions(**options)
86
+ except ValidationError as e:
87
+ _parse_validation_error(e, ForceDirectedLayoutOptions)
88
+ elif layout == Layout.HIERARCHICAL:
89
+ try:
90
+ return HierarchicalLayoutOptions(**options)
91
+ except ValidationError as e:
92
+ _parse_validation_error(e, ForceDirectedLayoutOptions)
93
+
94
+ raise ValueError(
95
+ f"Layout options only supported for layouts `{Layout.FORCE_DIRECTED}` and `{Layout.HIERARCHICAL}`, but was `{layout}`"
96
+ )
97
+
98
+
36
99
  @enum_tools.documentation.document_enum
37
100
  class Renderer(str, Enum):
38
101
  """
@@ -72,6 +135,9 @@ class RenderOptions(BaseModel, extra="allow"):
72
135
  """
73
136
 
74
137
  layout: Optional[Layout] = None
138
+ layout_options: Optional[Union[HierarchicalLayoutOptions, ForceDirectedLayoutOptions]] = Field(
139
+ None, serialization_alias="layoutOptions"
140
+ )
75
141
  renderer: Optional[Renderer] = None
76
142
 
77
143
  pan_X: Optional[float] = Field(None, serialization_alias="panX")
@@ -84,5 +150,34 @@ class RenderOptions(BaseModel, extra="allow"):
84
150
  min_zoom: Optional[float] = Field(None, serialization_alias="minZoom", description="The minimum zoom level allowed")
85
151
  allow_dynamic_min_zoom: Optional[bool] = Field(None, serialization_alias="allowDynamicMinZoom")
86
152
 
153
+ @model_validator(mode="after")
154
+ def check_layout_options_match(self) -> RenderOptions:
155
+ if self.layout_options is None:
156
+ return self
157
+
158
+ if self.layout == Layout.HIERARCHICAL and not isinstance(self.layout_options, HierarchicalLayoutOptions):
159
+ raise ValueError("layout_options must be of type HierarchicalLayoutOptions for hierarchical layout")
160
+ if self.layout == Layout.FORCE_DIRECTED and not isinstance(self.layout_options, ForceDirectedLayoutOptions):
161
+ raise ValueError("layout_options must be of type ForceDirectedLayoutOptions for force-directed layout")
162
+ return self
163
+
87
164
  def to_dict(self) -> dict[str, Any]:
88
165
  return self.model_dump(exclude_none=True, by_alias=True)
166
+
167
+
168
+ def _parse_validation_error(e: ValidationError, entity_type: type[BaseModel]) -> None:
169
+ for err in e.errors():
170
+ loc = err["loc"][0]
171
+ if err["type"] == "missing":
172
+ raise ValueError(
173
+ f"Mandatory `{entity_type.__name__}` parameter '{loc}' is missing. Expected one of {entity_type.model_fields[loc].validation_alias.choices} to be present" # type: ignore
174
+ )
175
+ elif err["type"] == "extra_forbidden":
176
+ raise ValueError(
177
+ f"Unexpected `{entity_type.__name__}` parameter '{loc}' with provided input '{err['input']}'. "
178
+ f"Allowed parameters are: {', '.join(entity_type.model_fields.keys())}"
179
+ )
180
+ else:
181
+ raise ValueError(
182
+ f"Error for `{entity_type.__name__}` parameter '{loc}' with provided input '{err['input']}'. Reason: {err['msg']}"
183
+ )
neo4j_viz/pandas.py CHANGED
@@ -4,6 +4,7 @@ from collections.abc import Iterable
4
4
  from typing import Optional, Union
5
5
 
6
6
  from pandas import DataFrame
7
+ from pydantic import BaseModel, ValidationError
7
8
 
8
9
  from .node import Node
9
10
  from .relationship import Relationship
@@ -12,19 +13,54 @@ from .visualization_graph import VisualizationGraph
12
13
  DFS_TYPE = Union[DataFrame, Iterable[DataFrame]]
13
14
 
14
15
 
16
+ def _parse_validation_error(e: ValidationError, entity_type: type[BaseModel]) -> None:
17
+ for err in e.errors():
18
+ loc = err["loc"][0]
19
+ if err["type"] == "missing":
20
+ raise ValueError(
21
+ f"Mandatory {entity_type.__name__.lower()} column '{loc}' is missing. Expected one of {entity_type.model_fields[loc].validation_alias.choices} to be present" # type: ignore
22
+ )
23
+ else:
24
+ raise ValueError(
25
+ f"Error for {entity_type.__name__.lower()} column '{loc}' with provided input '{err['input']}'. Reason: {err['msg']}"
26
+ )
27
+
28
+
15
29
  def _from_dfs(
16
- node_dfs: DFS_TYPE,
30
+ node_dfs: Optional[DFS_TYPE],
17
31
  rel_dfs: DFS_TYPE,
18
32
  node_radius_min_max: Optional[tuple[float, float]] = (3, 60),
19
33
  rename_properties: Optional[dict[str, str]] = None,
20
34
  ) -> VisualizationGraph:
35
+ relationships = _parse_relationships(rel_dfs, rename_properties=rename_properties)
36
+
37
+ if node_dfs is None:
38
+ has_size = False
39
+ node_ids = set()
40
+ for rel in relationships:
41
+ node_ids.add(rel.source)
42
+ node_ids.add(rel.target)
43
+ nodes = [Node(id=id) for id in node_ids]
44
+ else:
45
+ nodes, has_size = _parse_nodes(node_dfs, rename_properties=rename_properties)
46
+
47
+ VG = VisualizationGraph(nodes=nodes, relationships=relationships)
48
+
49
+ if node_radius_min_max is not None and has_size:
50
+ VG.resize_nodes(node_radius_min_max=node_radius_min_max)
51
+
52
+ return VG
53
+
54
+
55
+ def _parse_nodes(node_dfs: DFS_TYPE, rename_properties: Optional[dict[str, str]]) -> tuple[list[Node], bool]:
21
56
  if isinstance(node_dfs, DataFrame):
22
57
  node_dfs_iter: Iterable[DataFrame] = [node_dfs]
58
+ elif node_dfs is None:
59
+ node_dfs_iter = []
23
60
  else:
24
61
  node_dfs_iter = node_dfs
25
62
 
26
63
  all_node_field_aliases = Node.all_validation_aliases()
27
- all_rel_field_aliases = Relationship.all_validation_aliases()
28
64
 
29
65
  has_size = True
30
66
  nodes = []
@@ -41,14 +77,23 @@ def _from_dfs(
41
77
  key = rename_properties[key]
42
78
  properties[key] = value
43
79
 
44
- nodes.append(Node(**top_level, properties=properties))
80
+ try:
81
+ nodes.append(Node(**top_level, properties=properties))
82
+ except ValidationError as e:
83
+ _parse_validation_error(e, Node)
84
+
85
+ return nodes, has_size
86
+
87
+
88
+ def _parse_relationships(rel_dfs: DFS_TYPE, rename_properties: Optional[dict[str, str]]) -> list[Relationship]:
89
+ all_rel_field_aliases = Relationship.all_validation_aliases()
45
90
 
46
91
  if isinstance(rel_dfs, DataFrame):
47
92
  rel_dfs_iter: Iterable[DataFrame] = [rel_dfs]
48
93
  else:
49
94
  rel_dfs_iter = rel_dfs
95
+ relationships: list[Relationship] = []
50
96
 
51
- relationships = []
52
97
  for rel_df in rel_dfs_iter:
53
98
  for _, row in rel_df.iterrows():
54
99
  top_level = {}
@@ -61,18 +106,16 @@ def _from_dfs(
61
106
  key = rename_properties[key]
62
107
  properties[key] = value
63
108
 
64
- relationships.append(Relationship(**top_level, properties=properties))
109
+ try:
110
+ relationships.append(Relationship(**top_level, properties=properties))
111
+ except ValidationError as e:
112
+ _parse_validation_error(e, Relationship)
65
113
 
66
- VG = VisualizationGraph(nodes=nodes, relationships=relationships)
67
-
68
- if node_radius_min_max is not None and has_size:
69
- VG.resize_nodes(node_radius_min_max=node_radius_min_max)
70
-
71
- return VG
114
+ return relationships
72
115
 
73
116
 
74
117
  def from_dfs(
75
- node_dfs: DFS_TYPE,
118
+ node_dfs: Optional[DFS_TYPE],
76
119
  rel_dfs: DFS_TYPE,
77
120
  node_radius_min_max: Optional[tuple[float, float]] = (3, 60),
78
121
  ) -> VisualizationGraph:
@@ -85,8 +128,9 @@ def from_dfs(
85
128
 
86
129
  Parameters
87
130
  ----------
88
- node_dfs: Union[DataFrame, Iterable[DataFrame]]
131
+ node_dfs: Optional[Union[DataFrame, Iterable[DataFrame]]]
89
132
  DataFrame or iterable of DataFrames containing node data.
133
+ If None, the nodes will be created from the source and target node ids in the rel_dfs.
90
134
  rel_dfs: Union[DataFrame, Iterable[DataFrame]]
91
135
  DataFrame or iterable of DataFrames containing relationship data.
92
136
  node_radius_min_max : tuple[float, float], optional
@@ -2,7 +2,7 @@ from __future__ import annotations
2
2
 
3
3
  import warnings
4
4
  from collections.abc import Iterable
5
- from typing import Any, Callable, Hashable, Optional
5
+ from typing import Any, Callable, Hashable, Optional, Union
6
6
 
7
7
  from IPython.display import HTML
8
8
  from pydantic_extra_types.color import Color, ColorType
@@ -11,7 +11,13 @@ from .colors import NEO4J_COLORS_CONTINUOUS, NEO4J_COLORS_DISCRETE, ColorSpace,
11
11
  from .node import Node, NodeIdType
12
12
  from .node_size import RealNumber, verify_radii
13
13
  from .nvl import NVL
14
- from .options import Layout, Renderer, RenderOptions
14
+ from .options import (
15
+ Layout,
16
+ LayoutOptions,
17
+ Renderer,
18
+ RenderOptions,
19
+ construct_layout_options,
20
+ )
15
21
  from .relationship import Relationship
16
22
 
17
23
 
@@ -42,6 +48,7 @@ class VisualizationGraph:
42
48
  def render(
43
49
  self,
44
50
  layout: Optional[Layout] = None,
51
+ layout_options: Union[dict[str, Any], LayoutOptions, None] = None,
45
52
  renderer: Renderer = Renderer.CANVAS,
46
53
  width: str = "100%",
47
54
  height: str = "600px",
@@ -60,6 +67,8 @@ class VisualizationGraph:
60
67
  ----------
61
68
  layout:
62
69
  The `Layout` to use.
70
+ layout_options:
71
+ The `LayoutOptions` to use.
63
72
  renderer:
64
73
  The `Renderer` to use.
65
74
  width:
@@ -92,8 +101,19 @@ class VisualizationGraph:
92
101
 
93
102
  Renderer.check(renderer, num_nodes)
94
103
 
104
+ if not layout:
105
+ layout = Layout.FORCE_DIRECTED
106
+ if not layout_options:
107
+ layout_options = {}
108
+
109
+ if isinstance(layout_options, dict):
110
+ layout_options_typed = construct_layout_options(layout, layout_options)
111
+ else:
112
+ layout_options_typed = layout_options
113
+
95
114
  render_options = RenderOptions(
96
115
  layout=layout,
116
+ layout_options=layout_options_typed,
97
117
  renderer=renderer,
98
118
  pan_X=pan_position[0] if pan_position is not None else None,
99
119
  pan_Y=pan_position[1] if pan_position is not None else None,
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: neo4j-viz
3
- Version: 0.3.1
3
+ Version: 0.4.0
4
4
  Summary: A simple graph visualization tool
5
5
  Author-email: Neo4j <team-gds@neo4j.org>
6
6
  Project-URL: Homepage, https://neo4j.com/
@@ -1,22 +1,22 @@
1
- neo4j_viz/__init__.py,sha256=ATDPdaupFWIWaOWtJtfCGVRVuuwXKNe1hNdENofgRLk,270
1
+ neo4j_viz/__init__.py,sha256=Q-VZlJe3_kAow_-F_-9RsHCQfbOfv5on26YD9ihw27o,504
2
2
  neo4j_viz/colors.py,sha256=IvOCTmCu7WTMna_wNLZ3GrThTwFyIoKtNkmZYDLdYac,6694
3
- neo4j_viz/gds.py,sha256=v6b3XdSoWSoOu-U2MWQM-5QXLiPT3_9gGOv7haxuozE,4135
4
- neo4j_viz/gql_create.py,sha256=YH9mZUx-b86h714wCIbikGoxZD7IEuOmhKDdrp5fhXk,13264
5
- neo4j_viz/neo4j.py,sha256=UTrLZRlDgkw2w8Ov4P1oP8w-25Kf0sMCkLFDq3qD-Q8,4855
3
+ neo4j_viz/gds.py,sha256=Cu-0RDi6YtWiuWP1N06h5P0zd5mQx0z5cafr0fs2K24,6637
4
+ neo4j_viz/gql_create.py,sha256=K33cT6dOj8eJPGNNJXiXlCfLIzNxTwcW4n_2AG3_zaY,14751
5
+ neo4j_viz/neo4j.py,sha256=_bZkj1XQKazueRM7Ti0pIPdSI8fVd432mZbQsxFO2yw,6112
6
6
  neo4j_viz/node.py,sha256=MiLoghsn2NLs_iV65NuW7u3iaxP8MTKoNy6La9TdreY,3886
7
7
  neo4j_viz/node_size.py,sha256=c_sMtQSD8eJ_6Y0Kr6ku0LOs9VoEDxfYCUUzUWZ-1Xo,1197
8
8
  neo4j_viz/nvl.py,sha256=ZN3tyWar9ugR88r5N6txW3ThfNEWOt5A1KzrrRnLKwk,5262
9
- neo4j_viz/options.py,sha256=QBeHLqHOJFtSCjzHvv-2A9TzTbnIaC6_onQq9fUlT_4,3079
10
- neo4j_viz/pandas.py,sha256=bju4Pcoe-d_MFG6XOpVPPkD_p3cF-gWuXqfA9oxyvSU,3382
9
+ neo4j_viz/options.py,sha256=eOpiLcIfFvUiPoozyT44F9MHGRkqCfBZFmh0u_6DfwY,6400
10
+ neo4j_viz/pandas.py,sha256=Ajn77VRcen4lqrVQp0O9yUG5bZ7QkjiCIpjj0UFCD0w,5162
11
11
  neo4j_viz/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
12
12
  neo4j_viz/relationship.py,sha256=sRgGjNzlqt6wPmiB3WXBTxR_W_5Z40VofpHUZvkRS1I,4143
13
- neo4j_viz/visualization_graph.py,sha256=ogYhxAyPzqOcSogYSesGAV6iRQDLIA-YhBImEShuCPM,13175
13
+ neo4j_viz/visualization_graph.py,sha256=Fizmzm8p4p3Fbd3gsiTymkXgI3crpdmr5ipv4gFv3SY,13760
14
14
  neo4j_viz/resources/icons/screenshot.svg,sha256=Ns9Yi2Iq4lIaiFvzc0pXBmjxt4fcmBO-I4cI8Xiu1HE,311
15
15
  neo4j_viz/resources/icons/zoom-in.svg,sha256=PsO5yFkA1JnGM2QV_qxHKG13qmoR-RrlWARpaXNp5qU,415
16
16
  neo4j_viz/resources/icons/zoom-out.svg,sha256=OQRADAoe2bxbCeFufg6W22nR41q5NlI8QspT9l5pXUw,400
17
17
  neo4j_viz/resources/nvl_entrypoint/base.js,sha256=QfFjqd7Uo2F-plgFlPfLzUcjqzTzqUh533VaBemJhLI,1816247
18
18
  neo4j_viz/resources/nvl_entrypoint/styles.css,sha256=JjeTSB9OJT2KMfb8yFUUMLMG7Rzrf3o60hSCD547zTk,1123
19
- neo4j_viz-0.3.1.dist-info/METADATA,sha256=p8n2aK9ELDWZX75mUyDCh1pLR22TdWrQarXTXmXYcAU,7074
20
- neo4j_viz-0.3.1.dist-info/WHEEL,sha256=zaaOINJESkSfm_4HQVc5ssNzHCPXhJm0kEUakpsEHaU,91
21
- neo4j_viz-0.3.1.dist-info/top_level.txt,sha256=jPUM3z8MOtxqDanc2VzqkxG4HJn8aaq4S7rnCFNk_Vs,10
22
- neo4j_viz-0.3.1.dist-info/RECORD,,
19
+ neo4j_viz-0.4.0.dist-info/METADATA,sha256=J3KTYHc4S8w50RqS4VbTaOQ4EaAWjGqyzVQn9zfU7OY,7074
20
+ neo4j_viz-0.4.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
21
+ neo4j_viz-0.4.0.dist-info/top_level.txt,sha256=jPUM3z8MOtxqDanc2VzqkxG4HJn8aaq4S7rnCFNk_Vs,10
22
+ neo4j_viz-0.4.0.dist-info/RECORD,,
@@ -1,5 +1,5 @@
1
1
  Wheel-Version: 1.0
2
- Generator: setuptools (80.8.0)
2
+ Generator: setuptools (80.9.0)
3
3
  Root-Is-Purelib: true
4
4
  Tag: py3-none-any
5
5