nci-cidc-schemas 0.27.21__py2.py3-none-any.whl → 0.27.22__py2.py3-none-any.whl

cidc_schemas/__init__.py

@@ -2,4 +2,4 @@
 
 __author__ = """NCI"""
 __email__ = "nci-cidc-tools-admin@mail.nih.gov"
-__version__ = "0.27.21"
+__version__ = "0.27.22"

cidc_schemas/schemas/sample.json

@@ -6,7 +6,7 @@
 
 	"$comment": "description used in docs/index.html and docs/sample.html",
     "description": "Any material sample taken from a biological entity for testing, diagnostic, propagation, treatment or research purposes, including a sample obtained from a living organism or taken from the biological object after halting of all its life functions. Biospecimen can contain one or more components including but not limited to cellular molecules, cells, tissues, organs, body fluids, embryos, and body excretory products.",
-    
+
     "properties": {
         "cimac_id": {
             "description": "Specimen identifier assigned by the CIMAC-CIDC Network. Formatted as CTTTPPPSS.AA for trial code TTT, participant PPP, sample SS, and aliquot AA.",

cidc_schemas/schemas/templates/manifests/normal_blood_dna_template.json

@@ -219,7 +219,8 @@
                         },
                         "type of tumor sample": {
                             "merge_pointer": "/type_of_tumor_sample",
-                            "type_ref": "sample.json#properties/type_of_tumor_sample"
+                            "type_ref": "sample.json#properties/type_of_tumor_sample",
+                            "allow_empty": true
                         },
                         "sample collection procedure": {
                             "merge_pointer": "/sample_collection_procedure",

{nci_cidc_schemas-0.27.21.dist-info → nci_cidc_schemas-0.27.22.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nci_cidc_schemas
-Version: 0.27.21
+Version: 0.27.22
 Summary: The CIDC data model and tools for working with it.
 Home-page: https://github.com/NCI-CIDC/cidc-schemas
 Author: NCI

{nci_cidc_schemas-0.27.21.dist-info → nci_cidc_schemas-0.27.22.dist-info}/RECORD

@@ -1,4 +1,4 @@
-cidc_schemas/__init__.py,sha256=VCp_9EcG-4L8tZOfe9noiPFJoIcB7WIS2dQZJzj7wLo,136
+cidc_schemas/__init__.py,sha256=COii5dEs7h55Xtjv-Tn6FFlgtxB8TrzZLQlVnQXVgwo,136
 cidc_schemas/cli.py,sha256=gWiktRlraNH8Q0zNUae9dohKjPwBmcY0BJwdcQ_fIic,4099
 cidc_schemas/constants.py,sha256=RULs7pGuBAVq1teXymrfbVsK23ZowJvLuZlv0KcjL-Y,698
 cidc_schemas/json_validation.py,sha256=spmPsqinib7Ns5GvWOKKa1rc7IrN_s2bqifpTKdaLVU,23288
@@ -20,7 +20,7 @@ cidc_schemas/schemas/aliquot.json,sha256=F24s6xGTeJl-VT6s6wvV8YtMA4O-0BsUCwtD2OE
 cidc_schemas/schemas/clinical_data.json,sha256=ubt2dqTLCbDuxuOXrBObT_xLHVSArMBx4oASFOAYEas,1474
 cidc_schemas/schemas/clinical_trial.json,sha256=aUjYgdtlRWDfULk0-apralt4-KrtjriUqt3qNTdL2Rc,4442
 cidc_schemas/schemas/participant.json,sha256=X72GQSdLqhZl_Vg8OHPqRotblIluNSmiw8N5UeM-di8,2843
-cidc_schemas/schemas/sample.json,sha256=ljUzhe7J2WKHpLcz5XZTxIx7oRQa8uEYO-OQse5L-HA,22227
+cidc_schemas/schemas/sample.json,sha256=pZeMT-Mn_Y8Lq12Ozl72bvxBnh-hiFUegWhopRxMIbQ,22223
 cidc_schemas/schemas/shipping_core.json,sha256=HXuAmmuQS8xzi-2G1yUCXsi8TYAIS9-Oylbidjgh3sM,4618
 cidc_schemas/schemas/artifacts/artifact_bam.json,sha256=nPy3qx07--arLyb9VgfdVK6OJoMPhr6rnp-3AF6o82Q,1653
 cidc_schemas/schemas/artifacts/artifact_bam_bai.json,sha256=S1LxCZVyN3v-Hxhs7TEDbGcV-y7LVdAoLzGblT9IhEk,1671
@@ -154,7 +154,7 @@ cidc_schemas/schemas/templates/assays/wes_bam_template.json,sha256=nxbb_lNPi-5cd
 cidc_schemas/schemas/templates/assays/wes_fastq_template.json,sha256=vuwuIpqXyqpGxCunpjbHKaBQhfKFnr2R-wMkXDiJdKM,3143
 cidc_schemas/schemas/templates/manifests/h_and_e_template.json,sha256=8fbhWxKWhITds1KkbEdQxHHoeoKB2Tm40plzsxz3_FE,18009
 cidc_schemas/schemas/templates/manifests/microbiome_dna_template.json,sha256=POucJzR6ac_ndXgttL8Pm6s7BKtu5tqJz4Y49U8zLj0,17848
-cidc_schemas/schemas/templates/manifests/normal_blood_dna_template.json,sha256=13FceWQ4DR09N0hJgBwcN6aO6q94Ru-ys1JZcd_Iefk,18931
+cidc_schemas/schemas/templates/manifests/normal_blood_dna_template.json,sha256=emT2mC8vwKU4rjBNm-NMS5JYxDelDNH2YL5QESOXm-s,18980
 cidc_schemas/schemas/templates/manifests/normal_tissue_dna_template.json,sha256=yAKMW5KIbQ14O8wXUTRdMM1QFg-hxLNz0y4XncxPpRI,18669
 cidc_schemas/schemas/templates/manifests/pbmc_template.json,sha256=esGW9nVQ6Elgf0LeELowwpxlP7EOgSgnF6Jka0AnsPA,18778
 cidc_schemas/schemas/templates/manifests/plasma_template.json,sha256=VNraMcIdpxvPJC5SH4nnUeqOCz5HUuiGiMcKC20Ctso,16138
@@ -162,9 +162,9 @@ cidc_schemas/schemas/templates/manifests/tissue_slide_template.json,sha256=q2GmO
 cidc_schemas/schemas/templates/manifests/tumor_normal_pairing_template.json,sha256=lVJrGb28n-vyfjGBzhrzjn1lMKw1b4HXXmWtwA603v0,2797
 cidc_schemas/schemas/templates/manifests/tumor_tissue_dna_template.json,sha256=LpaoDXDS11NCa-Dv37N-tzEGomswQrx5fypkUcG7xJk,18956
 cidc_schemas/schemas/templates/manifests/tumor_tissue_rna_template.json,sha256=-gww6NCHbtbI5z7UmNSmKyPK3IqKCE8F6n4XwTAb_gk,18101
-nci_cidc_schemas-0.27.21.dist-info/licenses/LICENSE,sha256=zK77-w4rYCZBHAYJEGkcFuPXwKIsP7jMPZ2iQOXjzko,1072
-nci_cidc_schemas-0.27.21.dist-info/METADATA,sha256=haii5X0q96KRjTe_PXdR1-oyBp4PdHQ1r-y20sfh9d0,4554
-nci_cidc_schemas-0.27.21.dist-info/WHEEL,sha256=JNWh1Fm1UdwIQV075glCn4MVuCRs0sotJIq-J6rbxCU,109
-nci_cidc_schemas-0.27.21.dist-info/entry_points.txt,sha256=kSyTzXeJQrJp_2ZX0GS_NnbJR8ceQKLBSgER46PM0hs,55
-nci_cidc_schemas-0.27.21.dist-info/top_level.txt,sha256=Wwb5Cu7QrnbmSJxI2d00e3-Mir36t0jTRnSulmfhi30,13
-nci_cidc_schemas-0.27.21.dist-info/RECORD,,
+nci_cidc_schemas-0.27.22.dist-info/licenses/LICENSE,sha256=zK77-w4rYCZBHAYJEGkcFuPXwKIsP7jMPZ2iQOXjzko,1072
+nci_cidc_schemas-0.27.22.dist-info/METADATA,sha256=qDRkei6yKpzptau2M8tO7EYtx7KQOOQ24t6bzTrbzeU,4554
+nci_cidc_schemas-0.27.22.dist-info/WHEEL,sha256=JNWh1Fm1UdwIQV075glCn4MVuCRs0sotJIq-J6rbxCU,109
+nci_cidc_schemas-0.27.22.dist-info/entry_points.txt,sha256=kSyTzXeJQrJp_2ZX0GS_NnbJR8ceQKLBSgER46PM0hs,55
+nci_cidc_schemas-0.27.22.dist-info/top_level.txt,sha256=Wwb5Cu7QrnbmSJxI2d00e3-Mir36t0jTRnSulmfhi30,13
+nci_cidc_schemas-0.27.22.dist-info/RECORD,,