nci-cidc-api-modules 1.2.52__py3-none-any.whl → 1.2.54__py3-none-any.whl

cidc_api/__init__.py

@@ -1 +1 @@
-__version__ = "1.2.52"
+__version__ = "1.2.54"

cidc_api/models/code_systems.py

@@ -0,0 +1,29 @@
+from typing import Optional
+
+from sqlalchemy import MetaData, String
+from sqlalchemy.orm import declarative_base, mapped_column, Mapped
+
+SCHEMA = "code_systems"
+
+metadata_obj = MetaData(schema=SCHEMA)
+Base = declarative_base(metadata=metadata_obj)
+
+
+class Ctcae60(Base):
+    __tablename__ = "ctcae_60"
+
+    code: Mapped[str] = mapped_column(String(8), primary_key=True)
+    term: Mapped[Optional[str]] = mapped_column(String(255), nullable=True)
+
+    def __repr__(self) -> str:
+        return f"Ctcae60(code={self.code!r}, term={self.term!r})"
+
+
+class Icdo3(Base):
+    __tablename__ = "icdo_3"
+
+    morphological_code: Mapped[str] = mapped_column(String(6), primary_key=True)
+    morphological_term: Mapped[Optional[str]] = mapped_column(String(255), nullable=True)
+
+    def __repr__(self) -> str:
+        return f"Icdo3(morphological_code={self.morphological_code!r}, morphological_term={self.morphological_term!r})"

cidc_api/models/db/stage1/adverse_event_orm.py

@@ -13,6 +13,7 @@ from cidc_api.models.types import (
     SystemOrganClass,
     AttributionCause,
     AttributionLikelihood,
+    YN,
     YNU,
 )
 
@@ -33,7 +34,7 @@ class AdverseEventORM(BaseORM):
     severity_grade: Mapped[SeverityGrade]
     event_other_specify: Mapped[str | None]
     system_organ_class: Mapped[SystemOrganClass | None]
-    discontinuation_due_to_event: Mapped[bool]
+    discontinuation_due_to_event: Mapped[YN]
     days_to_onset_of_event: Mapped[NonNegativeInt]
     days_to_resolution_of_event: Mapped[NonNegativeInt | None]
     serious_adverse_event: Mapped[YNU]

cidc_api/models/db/stage1/demographic_orm.py

@@ -17,6 +17,7 @@ from cidc_api.models.types import (
     Occupation,
     Education,
     AgeAtEnrollmentUnits,
+    YN,
 )
 
 
@@ -29,7 +30,7 @@ class DemographicORM(BaseORM):
     participant_id: Mapped[int] = mapped_column(ForeignKey("stage1.participant.participant_id", ondelete="CASCADE"))
     age_at_enrollment: Mapped[PositiveInt | None]
     age_at_enrollment_units: Mapped[AgeAtEnrollmentUnits | None]
-    age_90_or_over: Mapped[bool]
+    age_90_or_over: Mapped[YN]
     sex: Mapped[Sex]
     race: Mapped[List[Race]] = mapped_column(JSON)
     ethnicity: Mapped[Ethnicity]

cidc_api/models/db/stage1/radiotherapy_dose_orm.py

@@ -9,8 +9,9 @@ from cidc_api.models.types import (
     RadiotherapyProcedure,
     UberonAnatomicalTerm,
     RadiotherapyDoseUnits,
-    YNU,
     RadiationExtent,
+    YN,
+    YNU,
 )
 
 
@@ -26,7 +27,7 @@ class RadiotherapyDoseORM(BaseORM):
     days_to_end: Mapped[NonNegativeInt]
     procedure: Mapped[RadiotherapyProcedure]
     anatomical_location: Mapped[UberonAnatomicalTerm | None]
-    is_total_dose: Mapped[bool]
+    is_total_dose: Mapped[YN]
     number_of_fractions: Mapped[NonNegativeInt | None]
     received_dose: Mapped[NonNegativeFloat]
     received_dose_units: Mapped[RadiotherapyDoseUnits]

cidc_api/models/db/stage1/response_by_system_orm.py

@@ -4,7 +4,7 @@ from sqlalchemy import ForeignKey, String
 from sqlalchemy.orm import Mapped, mapped_column, relationship
 
 from cidc_api.models.db.stage1.base_orm import BaseORM
-from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA
+from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA, YN
 
 
 class ResponseBySystemORM(BaseORM):
@@ -19,7 +19,7 @@ class ResponseBySystemORM(BaseORM):
     best_overall_response: Mapped[BestOverallResponse] = mapped_column(String)
     response_duration: Mapped[PositiveInt | None]
     duration_of_stable_disease: Mapped[PositiveInt | None]
-    durable_clinical_benefit: Mapped[bool | None]
+    durable_clinical_benefit: Mapped[YN | None]
     days_to_first_response: Mapped[PositiveInt | None]
     days_to_best_response: Mapped[PositiveInt | None]
     progression: Mapped[YNUNA]

cidc_api/models/db/stage1/response_orm.py

@@ -5,7 +5,7 @@ from sqlalchemy import ForeignKey
 from sqlalchemy.orm import Mapped, mapped_column, relationship
 
 from cidc_api.models.db.stage1.base_orm import BaseORM
-from cidc_api.models.types import SurvivalStatus, YNUNA, CauseOfDeath
+from cidc_api.models.types import SurvivalStatus, YNUNA, CauseOfDeath, YN
 
 
 class ResponseORM(BaseORM):
@@ -21,8 +21,8 @@ class ResponseORM(BaseORM):
     pathological_complete_response: Mapped[YNUNA | None]
     days_to_death: Mapped[NonNegativeInt | None]
     cause_of_death: Mapped[CauseOfDeath | None]
-    evaluable_for_toxicity: Mapped[bool]
-    evaluable_for_efficacy: Mapped[bool]
+    evaluable_for_toxicity: Mapped[YN]
+    evaluable_for_efficacy: Mapped[YN]
     days_to_last_vital_status: Mapped[NonNegativeInt | None]
 
     participant: Mapped[ParticipantORM] = relationship(back_populates="response", cascade="all, delete")

cidc_api/models/db/stage2/adverse_event_orm.py

@@ -13,6 +13,7 @@ from cidc_api.models.types import (
     SystemOrganClass,
     AttributionCause,
     AttributionLikelihood,
+    YN,
     YNU,
 )
 
@@ -33,7 +34,7 @@ class AdverseEventORM(BaseORM):
     severity_grade: Mapped[SeverityGrade]
     event_other_specify: Mapped[str | None]
     system_organ_class: Mapped[SystemOrganClass | None]
-    discontinuation_due_to_event: Mapped[bool]
+    discontinuation_due_to_event: Mapped[YN]
     days_to_onset_of_event: Mapped[NonNegativeInt]
     days_to_resolution_of_event: Mapped[NonNegativeInt | None]
     serious_adverse_event: Mapped[YNU]

cidc_api/models/db/stage2/demographic_orm.py

@@ -17,6 +17,7 @@ from cidc_api.models.types import (
     Occupation,
     Education,
     AgeAtEnrollmentUnits,
+    YN,
 )
 
 
@@ -29,7 +30,7 @@ class DemographicORM(BaseORM):
     participant_id: Mapped[int] = mapped_column(ForeignKey("stage2.participant.participant_id", ondelete="CASCADE"))
     age_at_enrollment: Mapped[PositiveInt | None]
     age_at_enrollment_units: Mapped[AgeAtEnrollmentUnits | None]
-    age_90_or_over: Mapped[bool]
+    age_90_or_over: Mapped[YN]
     sex: Mapped[Sex]
     race: Mapped[List[Race]] = mapped_column(JSON)
     ethnicity: Mapped[Ethnicity]

cidc_api/models/db/stage2/radiotherapy_dose_orm.py

@@ -9,6 +9,7 @@ from cidc_api.models.types import (
     RadiotherapyProcedure,
     UberonAnatomicalTerm,
     RadiotherapyDoseUnits,
+    YN,
     YNU,
     RadiationExtent,
 )
@@ -26,7 +27,7 @@ class RadiotherapyDoseORM(BaseORM):
     days_to_end: Mapped[NonNegativeInt]
     procedure: Mapped[RadiotherapyProcedure]
     anatomical_location: Mapped[UberonAnatomicalTerm | None]
-    is_total_dose: Mapped[bool]
+    is_total_dose: Mapped[YN]
     number_of_fractions: Mapped[NonNegativeInt | None]
     received_dose: Mapped[NonNegativeFloat]
     received_dose_units: Mapped[RadiotherapyDoseUnits]

cidc_api/models/db/stage2/response_by_system_orm.py

@@ -4,7 +4,7 @@ from sqlalchemy import ForeignKey, String
 from sqlalchemy.orm import Mapped, mapped_column, relationship
 
 from cidc_api.models.db.stage2.base_orm import BaseORM
-from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA
+from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA, YN
 
 
 class ResponseBySystemORM(BaseORM):
@@ -19,7 +19,7 @@ class ResponseBySystemORM(BaseORM):
     best_overall_response: Mapped[BestOverallResponse] = mapped_column(String)
     response_duration: Mapped[PositiveInt | None]
     duration_of_stable_disease: Mapped[PositiveInt | None]
-    durable_clinical_benefit: Mapped[bool | None]
+    durable_clinical_benefit: Mapped[YN | None]
     days_to_first_response: Mapped[PositiveInt | None]
     days_to_best_response: Mapped[PositiveInt | None]
     progression: Mapped[YNUNA]

cidc_api/models/db/stage2/response_orm.py

@@ -5,7 +5,7 @@ from sqlalchemy import ForeignKey
 from sqlalchemy.orm import Mapped, mapped_column, relationship
 
 from cidc_api.models.db.stage2.base_orm import BaseORM
-from cidc_api.models.types import SurvivalStatus, YNUNA, CauseOfDeath
+from cidc_api.models.types import SurvivalStatus, YNUNA, YN, CauseOfDeath
 
 
 class ResponseORM(BaseORM):
@@ -21,8 +21,8 @@ class ResponseORM(BaseORM):
     pathological_complete_response: Mapped[YNUNA | None]
     days_to_death: Mapped[NonNegativeInt | None]
     cause_of_death: Mapped[CauseOfDeath | None]
-    evaluable_for_toxicity: Mapped[bool]
-    evaluable_for_efficacy: Mapped[bool]
+    evaluable_for_toxicity: Mapped[YN]
+    evaluable_for_efficacy: Mapped[YN]
     days_to_last_vital_status: Mapped[NonNegativeInt | None]
 
     participant: Mapped[ParticipantORM] = relationship(back_populates="response", cascade="all, delete")

cidc_api/models/pydantic/stage1/adverse_event.py

@@ -1,7 +1,7 @@
 from pydantic import NonNegativeInt
 
 from cidc_api.models.pydantic.base import Base
-from cidc_api.reference.ctcae import is_ctcae_other_term
+from cidc_api.code_systems.ctcae import is_ctcae_other_term
 from cidc_api.models.pydantic.base import forced_validator, forced_validators
 from cidc_api.models.errors import ValueLocError
 from cidc_api.models.types import (
@@ -13,6 +13,7 @@ from cidc_api.models.types import (
     SystemOrganClass,
     AttributionCause,
     AttributionLikelihood,
+    YN,
     YNU,
 )
 
@@ -53,7 +54,7 @@ class AdverseEvent(Base):
     system_organ_class: SystemOrganClass | None = None
 
     # Indicator to identify whether a participant exited the study prematurely due to the adverse event being described.
-    discontinuation_due_to_event: bool
+    discontinuation_due_to_event: YN
 
     # Days from enrollment date to date of onset of the adverse event.
     days_to_onset_of_event: NonNegativeInt

cidc_api/models/pydantic/stage1/demographic.py

@@ -15,6 +15,7 @@ from cidc_api.models.types import (
     Occupation,
     Education,
     AgeAtEnrollmentUnits,
+    YN,
 )
 
 
@@ -39,7 +40,7 @@ class Demographic(Base):
 
     # Indicates whether the participant is 90 years old or over. (for PHI purposes)
     # CDE: https://cadsr.cancer.gov/onedata/dmdirect/NIH/NCI/CO/CDEDD?filter=CDEDD.ITEM_ID=15354920%20and%20ver_nr=1
-    age_90_or_over: bool
+    age_90_or_over: YN
 
     # A textual description of a person's sex at birth. e.g. "Male"
     # CDE: https://cadsr.cancer.gov/onedata/dmdirect/NIH/NCI/CO/CDEDD?filter=CDEDD.ITEM_ID=7572817%20and%20ver_nr=3
@@ -100,13 +101,13 @@ class Demographic(Base):
         age_90_or_over = data.get("age_90_or_over", None)
         age_at_enrollment = int(data.get("age_at_enrollment", None) or 0)
 
-        if age_90_or_over:
+        if age_90_or_over == "Yes":
             if age_at_enrollment or age_at_enrollment_units:
                 raise ValueLocError(
                     'If "age_90_or_over" is "Yes" then "age_at_enrollment" and "age_at_enrollment_units" must be blank.',
                     loc="age_at_enrollment",
                 )
-        else:
+        elif age_90_or_over == "No":
             if not age_at_enrollment or not age_at_enrollment_units:
                 raise ValueLocError(
                     'If "age_90_or_over" is "No" then "age_at_enrollment" and "age_at_enrollment_units" are required.',
@@ -120,7 +121,7 @@ class Demographic(Base):
         age_90_or_over = data.get("age_90_or_over", None)
         age_at_enrollment = int(data.get("age_at_enrollment", None) or 0)
 
-        if not age_90_or_over:
+        if age_90_or_over == "No":
             age_in_years = age_at_enrollment if age_at_enrollment_units == "Years" else age_at_enrollment / 365.25
             if age_in_years >= 90:
                 raise ValueLocError(

cidc_api/models/pydantic/stage1/radiotherapy_dose.py

@@ -4,6 +4,7 @@ from cidc_api.models.pydantic.base import forced_validator, forced_validators
 from cidc_api.models.errors import ValueLocError
 from cidc_api.models.pydantic.base import Base
 from cidc_api.models.types import (
+    YN,
     YNU,
     RadiotherapyProcedure,
     UberonAnatomicalTerm,
@@ -38,7 +39,7 @@ class RadiotherapyDose(Base):
 
     # Indicates whether the record represents the total dose for a radiotherapy treatment course (which may be either
     # a multi-fractionated or a single-fraction dose).
-    is_total_dose: bool
+    is_total_dose: YN
 
     # The number of fractions a participant received to deliver the radiation dose.
     number_of_fractions: NonNegativeInt | None = None

cidc_api/models/pydantic/stage1/response.py

@@ -3,7 +3,7 @@ from cidc_api.models.pydantic.base import forced_validator, forced_validators
 
 from cidc_api.models.errors import ValueLocError
 from cidc_api.models.pydantic.base import Base
-from cidc_api.models.types import SurvivalStatus, YNUNA, CauseOfDeath
+from cidc_api.models.types import SurvivalStatus, YNUNA, YN, CauseOfDeath
 
 
 @forced_validators
@@ -39,10 +39,10 @@ class Response(Base):
     cause_of_death: CauseOfDeath | None = None
 
     # Indicates whether participant was evaluable for toxicity (adverse events, DLT, etc.) overall.
-    evaluable_for_toxicity: bool
+    evaluable_for_toxicity: YN
 
     # Indicates whether participant was evaluable for efficacy (for example, response, PFS, OS, etc.) overall.
-    evaluable_for_efficacy: bool
+    evaluable_for_efficacy: YN
 
     # Days from enrollment date to the last time the patient's vital status was verified.
     days_to_last_vital_status: NonNegativeInt | None = None

cidc_api/models/pydantic/stage1/response_by_system.py

@@ -6,7 +6,7 @@ from cidc_api.models.pydantic.base import forced_validator, forced_validators
 from cidc_api.models.errors import ValueLocError
 from cidc_api.models.pydantic.base import Base
 from cidc_api.models.pydantic.stage1.response import Response
-from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA
+from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA, YN
 
 
 negative_response_values = [
@@ -52,7 +52,7 @@ class ResponseBySystem(Base):
     duration_of_stable_disease: NonNegativeInt | None = None
 
     # Indicates whether a patient achieved a durable clinical benefit.
-    durable_clinical_benefit: bool | None = None
+    durable_clinical_benefit: YN | None = None
 
     # Number of days between enrollment date and the date of first response to trial treatment.
     days_to_first_response: PositiveInt | None = None

cidc_api/models/pydantic/stage2/adverse_event.py

@@ -3,7 +3,7 @@ from typing import Self
 from pydantic import NonNegativeInt, model_validator
 
 from cidc_api.models.pydantic.base import Base
-from cidc_api.reference.ctcae import is_ctcae_other_term
+from cidc_api.code_systems.ctcae import is_ctcae_other_term
 from cidc_api.models.types import (
     CTCAEEventTerm,
     CTCAEEventCode,
@@ -14,6 +14,7 @@ from cidc_api.models.types import (
     AttributionCause,
     AttributionLikelihood,
     YNU,
+    YN,
 )
 
 
@@ -52,7 +53,7 @@ class AdverseEvent(Base):
     system_organ_class: SystemOrganClass | None = None
 
     # Indicator to identify whether a participant exited the study prematurely due to the adverse event being described.
-    discontinuation_due_to_event: bool
+    discontinuation_due_to_event: YN
 
     # Days from enrollment date to date of onset of the adverse event.
     days_to_onset_of_event: NonNegativeInt

cidc_api/models/pydantic/stage2/demographic.py

@@ -13,6 +13,7 @@ from cidc_api.models.types import (
     Occupation,
     Education,
     AgeAtEnrollmentUnits,
+    YN,
 )
 
 
@@ -36,7 +37,7 @@ class Demographic(Base):
 
     # Indicates whether the participant is 90 years old or over. (for PHI purposes)
     # CDE: https://cadsr.cancer.gov/onedata/dmdirect/NIH/NCI/CO/CDEDD?filter=CDEDD.ITEM_ID=15354920%20and%20ver_nr=1
-    age_90_or_over: bool
+    age_90_or_over: YN
 
     # A textual description of a person's sex at birth. e.g. "Male"
     # CDE: https://cadsr.cancer.gov/onedata/dmdirect/NIH/NCI/CO/CDEDD?filter=CDEDD.ITEM_ID=7572817%20and%20ver_nr=3
@@ -92,12 +93,12 @@ class Demographic(Base):
 
     @model_validator(mode="after")
     def validate_age_at_enrollment_cr(self) -> Self:
-        if self.age_90_or_over:
+        if self.age_90_or_over == "Yes":
             if self.age_at_enrollment or self.age_at_enrollment_units:
                 raise ValueError(
                     'If "age_90_or_over" is "Yes" then "age_at_enrollment" and "age_at_enrollment_units" must be blank.'
                 )
-        else:
+        elif self.age_90_or_over == "No":
             if not self.age_at_enrollment or not self.age_at_enrollment_units:
                 raise ValueError(
                     'If "age_90_or_over" is "No" then "age_at_enrollment" and "age_at_enrollment_units" are required.'
@@ -106,7 +107,7 @@ class Demographic(Base):
 
     @model_validator(mode="after")
     def validate_age_at_enrollment_value(self) -> Self:
-        if not self.age_90_or_over:
+        if self.age_90_or_over == "No":
             age_in_years = (
                 self.age_at_enrollment if self.age_at_enrollment_units == "Years" else self.age_at_enrollment / 365.25
             )

cidc_api/models/pydantic/stage2/radiotherapy_dose.py

@@ -4,6 +4,7 @@ from pydantic import NonNegativeInt, NonNegativeFloat, model_validator
 
 from cidc_api.models.pydantic.base import Base
 from cidc_api.models.types import (
+    YN,
     YNU,
     RadiotherapyProcedure,
     UberonAnatomicalTerm,
@@ -37,7 +38,7 @@ class RadiotherapyDose(Base):
 
     # Indicates whether the record represents the total dose for a radiotherapy treatment course (which may be either
     # a multi-fractionated or a single-fraction dose).
-    is_total_dose: bool
+    is_total_dose: YN
 
     # The number of fractions a participant received to deliver the radiation dose.
     number_of_fractions: NonNegativeInt | None = None

cidc_api/models/pydantic/stage2/response.py

@@ -3,7 +3,7 @@ from typing import Self
 from pydantic import NonNegativeInt, model_validator
 
 from cidc_api.models.pydantic.base import Base
-from cidc_api.models.types import SurvivalStatus, YNUNA, CauseOfDeath
+from cidc_api.models.types import SurvivalStatus, YN, YNUNA, CauseOfDeath
 
 
 class Response(Base):
@@ -38,10 +38,10 @@ class Response(Base):
     cause_of_death: CauseOfDeath | None = None
 
     # Indicates whether participant was evaluable for toxicity (adverse events, DLT, etc.) overall.
-    evaluable_for_toxicity: bool
+    evaluable_for_toxicity: YN
 
     # Indicates whether participant was evaluable for efficacy (for example, response, PFS, OS, etc.) overall.
-    evaluable_for_efficacy: bool
+    evaluable_for_efficacy: YN
 
     # Days from enrollment date to the last time the patient's vital status was verified.
     days_to_last_vital_status: NonNegativeInt | None = None  # TODO: Needs CR check

cidc_api/models/pydantic/stage2/response_by_system.py

@@ -3,7 +3,7 @@ from typing import Self
 from pydantic import PositiveInt, model_validator, NonNegativeInt
 
 from cidc_api.models.pydantic.base import Base
-from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA
+from cidc_api.models.types import ResponseSystem, ResponseSystemVersion, BestOverallResponse, YNUNA, YN
 
 
 negative_response_values = [
@@ -45,7 +45,7 @@ class ResponseBySystem(Base):
     duration_of_stable_disease: NonNegativeInt | None = None
 
     # Indicates whether a patient achieved a durable clinical benefit.
-    durable_clinical_benefit: bool | None = None
+    durable_clinical_benefit: YN | None = None
 
     # Number of days between enrollment date and the date of first response to trial treatment.
     days_to_first_response: PositiveInt | None = None

cidc_api/models/types.py

@@ -3,19 +3,19 @@ from typing import Annotated, Literal
 from pydantic import AfterValidator
 from sqlalchemy.types import TypeDecorator, Unicode
 
-from cidc_api.reference.icdo3 import is_ICDO3_code, is_ICDO3_term
-from cidc_api.reference.uberon import is_uberon_term
-from cidc_api.reference.ctcae import (
+from cidc_api.code_systems.icdo3 import is_ICDO3_code, is_ICDO3_term
+from cidc_api.code_systems.uberon import is_uberon_term
+from cidc_api.code_systems.ctcae import (
     is_ctcae_event_term,
     is_ctcae_event_code,
     is_ctcae_severity_grade,
     is_ctcae_system_organ_class,
 )
-from cidc_api.reference.icd10cm import (
+from cidc_api.code_systems.icd10cm import (
     is_ICD10CM_code,
     is_ICD10CM_term,
 )
-from cidc_api.reference.gvhd import is_gvhd_organ
+from cidc_api.code_systems.gvhd import is_gvhd_organ
 
 # As python Enums are rather cumbersome when we only want a list of permissible values for a string, use Literal instead
 
@@ -468,6 +468,12 @@ MCategory = Literal[
 ]
 
 
+YN = Literal[
+    "Yes",
+    "No",
+]
+
+
 YNU = Literal[
     "Yes",
     "No",

{nci_cidc_api_modules-1.2.52.dist-info → nci_cidc_api_modules-1.2.54.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.52
+Version: 1.2.54
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license

{nci_cidc_api_modules-1.2.52.dist-info → nci_cidc_api_modules-1.2.54.dist-info}/RECORD

@@ -1,5 +1,5 @@
 boot.py,sha256=oS_16OgU34iDxyFNpJl5rb5KbfbsCXroUCNLwVPxPNg,416
-cidc_api/__init__.py,sha256=jf5CtcUq4OTsCQcG2e0HUKeI9KD06OUpOQioBuO1h-Y,23
+cidc_api/__init__.py,sha256=odKPoW2Uo_GtuB_RtRePNSus8XWCbeAFRoczr8nT784,23
 cidc_api/telemetry.py,sha256=LuZWkG8CKCn23O41RTNxEOQwMmfpp-fQ6zSInZhVJg8,3333
 cidc_api/config/__init__.py,sha256=5mX8GAPxUKV84iS-aGOoE-4m68LsOCGCDptXNdlgvj0,148
 cidc_api/config/db.py,sha256=mEz8ugjvRNGylCqDYHaaMqaZfDh7sbd76BowmfBvq5c,2428
@@ -7,20 +7,21 @@ cidc_api/config/logging.py,sha256=abhVYtn8lfhIt0tyV2WHFgSmp_s2eeJh7kodB6LH4J0,11
 cidc_api/config/secrets.py,sha256=jRFj7W43pWuPf9DZQLCKF7WPXf5cUv-BAaS3ASqhV_Q,1481
 cidc_api/config/settings.py,sha256=IlOSJhSyYYK4XQQ4uBdD58kXO-a2AHPWTSN1AT95b9Y,4545
 cidc_api/models/__init__.py,sha256=bl445G8Zic9YbhZ8ZBni07wtBMhLJRMBA-JqjLxx2bw,66
+cidc_api/models/code_systems.py,sha256=YR-SGg1UnCElHjibUauAFAs9ENLd7tT28V3sc-NQ4xk,918
 cidc_api/models/data.py,sha256=TyVXk5jJO1NN05CLqejLf5BPp6yLSNNxPmFOgXUnA1M,1313
 cidc_api/models/errors.py,sha256=UncRrh-4v0CR5mpLO0erWD1y9ctus3Nk6XOSvrTjfco,338
 cidc_api/models/migrations.py,sha256=UlS5How3J4ryaRuZT6F5VQtAKikkl0LTv9MgMO_ltiQ,11161
 cidc_api/models/models.py,sha256=RycbGNQHIud9mqCyIH_yrnN7PVSFwbUCjP6pe6sX5VA,154106
 cidc_api/models/schemas.py,sha256=6IE2dJoEMcMbi0Vr1V3cYKnPKU0hv9vRKBixOZHe88s,2766
-cidc_api/models/types.py,sha256=WVOTEH61FH5aGVwRbEcfNOce8NLjiEnl1ixtPWav2OA,30058
+cidc_api/models/types.py,sha256=V0N3RrrnP5bgj44bv3Aet1Mw424KgkcAOfv3QJRyRQI,30112
 cidc_api/models/db/stage1/__init__.py,sha256=zsxOSoogzL_xZ8B5OwcwLXvAmm6g2GYx1Zf6LLw8dq8,1917
 cidc_api/models/db/stage1/additional_treatment_orm.py,sha256=GCMzsYZl_B-7-TWYDBUXbt_Gri6YDv8XkYRheDLh3pc,926
-cidc_api/models/db/stage1/adverse_event_orm.py,sha256=32Kjpg6fvByp4gEVy6K28MlgMWQryG6GPh3un1F8x64,1914
+cidc_api/models/db/stage1/adverse_event_orm.py,sha256=fYFuO7_KnmozwF3D9JGIPloJy8-J0jBXnEMrg41p_bI,1920
 cidc_api/models/db/stage1/base_orm.py,sha256=izKizTf2W1fCK2CRUeyuErJbOaxNp6d299n4gqKWHDQ,246
 cidc_api/models/db/stage1/baseline_clinical_assessment_orm.py,sha256=pGanJlwnAm38LPVTu6XF4qP_mw-SqYP8AC3O8w8XPnw,911
 cidc_api/models/db/stage1/comorbidity_orm.py,sha256=C4P3kcpNpnt1ICgU2Xm5S-ou6Xhx6yr690g6F_hBoZ0,881
 cidc_api/models/db/stage1/consent_group_orm.py,sha256=O7oZr7-Rvmzn8o4kS_40e270sF2e-KX85VkXemsa2MM,1111
-cidc_api/models/db/stage1/demographic_orm.py,sha256=JR6CXCVLEvFTgElQazuNEgopIuf5Ik1w0m1kSkxp4Q0,1693
+cidc_api/models/db/stage1/demographic_orm.py,sha256=tCpqN7HTif5RUhvIuekFT-PVtzl4SD5Z5J_ArtOyHyk,1699
 cidc_api/models/db/stage1/disease_orm.py,sha256=Ni1kxQxgVi0MKUlovcsnmpR9v1TwKWcO6tpEr1oZcsE,1965
 cidc_api/models/db/stage1/exposure_orm.py,sha256=u6YKhAAX_0uYHMOYf8sQQFy3l9KluRykaIiggn9v_EY,811
 cidc_api/models/db/stage1/gvhd_diagnosis_acute_orm.py,sha256=0ItEmNE2H2Xmh4W3t0DNg3W764Uk00d5gni6maMQ3N0,1470
@@ -31,9 +32,9 @@ cidc_api/models/db/stage1/medical_history_orm.py,sha256=nyNOG_odEvPWqgu2DmiHT3K-
 cidc_api/models/db/stage1/other_malignancy_orm.py,sha256=wfoSCPUIzfw4anDi6FeqyhTzYrwTNlpDRCvL608zmXM,1303
 cidc_api/models/db/stage1/participant_orm.py,sha256=3-s6F0yTFzBYFZrDKv2xJMv5p3VBt5EL1Quu9cK4sd8,3541
 cidc_api/models/db/stage1/prior_treatment_orm.py,sha256=SNa_JOIF5gS61N0HFEfM7BHv3JYsflt6LQz03WLb8Lo,1325
-cidc_api/models/db/stage1/radiotherapy_dose_orm.py,sha256=dLp_ENJAq-_f6MAspaGK-6R6ngHceFKpsrjoBM8yviI,1500
-cidc_api/models/db/stage1/response_by_system_orm.py,sha256=pOQSE5g-EFUApgEDOXwxyQCmvoC6M9atSfBDsF9f3KI,1524
-cidc_api/models/db/stage1/response_orm.py,sha256=P9a0ZVq_hJ3dipRgJTFcdjuWi9ueyGd0oQYHRiACNpc,1163
+cidc_api/models/db/stage1/radiotherapy_dose_orm.py,sha256=fKHW6fKgv9cZhHNshwLl1pVotYhv9We5s4Nd3Jk6lDw,1506
+cidc_api/models/db/stage1/response_by_system_orm.py,sha256=J1-OBScj6mQVeDOKFaBh260aUJg-fUOqRwvad0E71Vw,1526
+cidc_api/models/db/stage1/response_orm.py,sha256=B3y1ryJ0RH3XiMYfuCVaUcsIM6_E0cHNTYMPQdsPDmU,1163
 cidc_api/models/db/stage1/specimen_orm.py,sha256=m1cq5SfkUETk6dk4s3uYLyXohpZgE8iU1Rzh0xVRTmw,1354
 cidc_api/models/db/stage1/stem_cell_transplant_orm.py,sha256=CqOAo-Pnj11XqR9a0CeaIGyLn5Ar42Hl_10tqEllnO0,1097
 cidc_api/models/db/stage1/surgery_orm.py,sha256=DCggc6xbjGhm-G93bueY5u43t896aBPTvRFTk3Gq8ys,1018
@@ -44,7 +45,7 @@ cidc_api/models/db/stage2/__init__.py,sha256=R33BM1VDKJya5uuyYnPoGFVfhSViclIOklS
 cidc_api/models/db/stage2/additional_treatment_orm.py,sha256=G8_3EgGWH0vf3Rt5hTmM9xFids4NPcEBkQSS7hsrIdI,924
 cidc_api/models/db/stage2/administrative_person_orm.py,sha256=yjBktBwIjzHwqIbs1BAqJhh3y8f6swmEJRGs-XDQ_OI,1016
 cidc_api/models/db/stage2/administrative_role_assignment_orm.py,sha256=9X3Fkecj8_pxui99LpvA7WIMuWcagYW-QiRcvI7gAHg,1291
-cidc_api/models/db/stage2/adverse_event_orm.py,sha256=lsou-Ej7F_LW7D4pZbgAoR3BLPkW-KJkNjPPv2RtlY0,1914
+cidc_api/models/db/stage2/adverse_event_orm.py,sha256=pveFKti63qAFBFjdWRu8dsn41DLtsC9Z2G3lp5oSpzI,1920
 cidc_api/models/db/stage2/arm_orm.py,sha256=5jSoHENJXpqW36UrECmBphz_MRQUcYIXGF0fvhMDMWY,707
 cidc_api/models/db/stage2/base_orm.py,sha256=nk9q0wlHxbuC7vzMtPCsnqeIRQufh3MCniMxu-h7__w,246
 cidc_api/models/db/stage2/baseline_clinical_assessment_orm.py,sha256=4V8RuiWGNf2c8Plzeikusslk8pZGhedDm_oXMMDcRbc,911
@@ -52,7 +53,7 @@ cidc_api/models/db/stage2/cohort_orm.py,sha256=ag3Epvnr8__3yfmyUjR7n9fBfMnBlpU1w
 cidc_api/models/db/stage2/comorbidity_orm.py,sha256=EbjqUj9vsFEL0KJFqsc04I-KFGjILje2H71WD2uP3ZQ,881
 cidc_api/models/db/stage2/consent_group_orm.py,sha256=d6r00XxWf7wHwYDAhBsEjSq3Ma2jixAa5l5mNDePNFk,1111
 cidc_api/models/db/stage2/contact_orm.py,sha256=__YFzOrYnMs_TNC1IAI1EL-Xx2stRJTUkcru5GDYleY,1267
-cidc_api/models/db/stage2/demographic_orm.py,sha256=qTO8w0AVTP7NpryfeinaR2X22ll6qA_jxCVGXmAjN60,1693
+cidc_api/models/db/stage2/demographic_orm.py,sha256=d1EI6mh69w_Zg3goYw6QFUeUdxZfnJ5z2jKmdjk2O_Q,1699
 cidc_api/models/db/stage2/disease_orm.py,sha256=-PVtbDHFI9PmlYTOsry8LFbuR2YVMq_NrVNkDSZMbLo,1965
 cidc_api/models/db/stage2/exposure_orm.py,sha256=LLuGsaW-dA8B5e__LP9LGAaU7QH5fo5-4Btx28mpE3A,811
 cidc_api/models/db/stage2/file_orm.py,sha256=Zn6HzTz_UcsZRAJUi3OvcASMMtYNh4AFLQTcq_NuG3A,1253
@@ -67,9 +68,9 @@ cidc_api/models/db/stage2/other_malignancy_orm.py,sha256=qcPL29e8RwAGquMWEp2-ZGS
 cidc_api/models/db/stage2/participant_orm.py,sha256=U2OICb5OUPpMuh7SPeQJ9GsX4uq5MDc2UYMt52BJYb4,3695
 cidc_api/models/db/stage2/prior_treatment_orm.py,sha256=pvtB3DD6UPtS7GQpAinvJi64mlZjEwWVcp0bFaHpASo,1305
 cidc_api/models/db/stage2/publication_orm.py,sha256=EMAq83WtgFYy5yBESgaajruB6fzYfMTLNyZDZiIJBLM,1040
-cidc_api/models/db/stage2/radiotherapy_dose_orm.py,sha256=QBNmehh5VsKzkc59u_CHsFIgWYKsEp4lFyxp5HPMysM,1500
-cidc_api/models/db/stage2/response_by_system_orm.py,sha256=FzbxFkcIt-IGzwejVITHVFZ5qYA5Oece3yEBqhzjPHw,1524
-cidc_api/models/db/stage2/response_orm.py,sha256=p4xtydLvuZovVwcMvq3-WdLsKeKtIl6KTklGlWGVBSA,1163
+cidc_api/models/db/stage2/radiotherapy_dose_orm.py,sha256=Ep_pL5BlVV-0BivYqD0pfT72ejzh0N4Y24hbmsDJ07o,1506
+cidc_api/models/db/stage2/response_by_system_orm.py,sha256=PsGIbA2nQo76ZwXc96pK53-La1P1d2ewrFFTwOyApVA,1526
+cidc_api/models/db/stage2/response_orm.py,sha256=iDz_qILvUC9lnDs_Pa1wT4hG_DveGVnGnsKT_YcPZog,1163
 cidc_api/models/db/stage2/shipment_orm.py,sha256=dDmj_PK2yAq23oh60sAcT2dkw5PjWmBoqO55YtFtExc,2007
 cidc_api/models/db/stage2/shipment_specimen_orm.py,sha256=0ufXOQPDjgucu5qXQWDAKnRXajvuldsZezj5ez6hsgg,909
 cidc_api/models/db/stage2/specimen_orm.py,sha256=-UDfQ0IlbmCs6GxCwVIF2eiFPgsjdgq_OAV-X58lH_U,4165
@@ -84,11 +85,11 @@ cidc_api/models/files/facets.py,sha256=vieZ3z_tYB29NqtvNzvKqajVwxM5ZLLZKeyQTq5lh
 cidc_api/models/pydantic/base.py,sha256=sL_0PwEH2vS8BMT_w-zL7CPeaU-R7ih5afRigX6k2DM,4069
 cidc_api/models/pydantic/stage1/__init__.py,sha256=H-NDjCd8isHTgZ7sqz-MIbzC-PpW1kEtR-x-Dyc8r6Q,1667
 cidc_api/models/pydantic/stage1/additional_treatment.py,sha256=TFVzjd1NPLSfH9UnL2W3aZhpZSzDsg97j9IK8t882YA,1050
-cidc_api/models/pydantic/stage1/adverse_event.py,sha256=ZW5iVnMmX7NtZcsgDAjzPorWPZDSJSmTXGK1EsU9AaQ,5167
+cidc_api/models/pydantic/stage1/adverse_event.py,sha256=PanE03MgP70M_i3glCeBCtScuG4zIpyKiJZfeNAOOBc,5176
 cidc_api/models/pydantic/stage1/baseline_clinical_assessment.py,sha256=5FYvtOVf_nIK1h3xTs3vQgJe2ivQSVHt_wfrTSDgVxU,1119
 cidc_api/models/pydantic/stage1/comorbidity.py,sha256=IfxFb0dZAdCY--Ze5kiZ3CrzVKJtuknpcpvrQ3ki-gI,1769
 cidc_api/models/pydantic/stage1/consent_group.py,sha256=aP_nd0GKK6K7VH-6IZRSDDX2RxFM_j9B36FIRGwysOU,1216
-cidc_api/models/pydantic/stage1/demographic.py,sha256=S2riNy6njMSamgupFAsbM656TDamQExRzUGKNYaBaOo,6752
+cidc_api/models/pydantic/stage1/demographic.py,sha256=UY3I6nJXsTVPNubQOsF6lQuciLioZl7gKk_Oo6AyoSA,6794
 cidc_api/models/pydantic/stage1/disease.py,sha256=G8d2iqsMhmDA3uxjOitxzmlFKIRxyUMp-o-H7eUfZFg,9250
 cidc_api/models/pydantic/stage1/exposure.py,sha256=bd9gUmOQ7ge-xvoxD17pX95MKxfHKD2xNaFEJAMAkn4,1571
 cidc_api/models/pydantic/stage1/gvhd_diagnosis_acute.py,sha256=jVMoWuLfspOZtOpC7rg1EzdvEAg8qEabcTaS6RRobZ8,1395
@@ -99,9 +100,9 @@ cidc_api/models/pydantic/stage1/medical_history.py,sha256=z-cE_ChyWUKTvWjVhKMUAY
 cidc_api/models/pydantic/stage1/other_malignancy.py,sha256=VIzhbkauaDfZdPxhTYpqNtwYBxE_4osE9wyZ67LQJx4,2622
 cidc_api/models/pydantic/stage1/participant.py,sha256=QfRkK2okY7nM84y9QMK12kZLURBGk-HNWWHL4pQZjec,2655
 cidc_api/models/pydantic/stage1/prior_treatment.py,sha256=axhyPHwYCoIvcIonjyPJ95HUyaAXqIuOd6hhoDM3LJU,2101
-cidc_api/models/pydantic/stage1/radiotherapy_dose.py,sha256=gDaL1OQuSuTauml6HafBiVvBn8gcynS3G1fa9KNhEPA,3833
-cidc_api/models/pydantic/stage1/response.py,sha256=TJlKmUz9SypbbDnv6iSmLb4KPEuFUPe9Q8iNSGsLbfI,3491
-cidc_api/models/pydantic/stage1/response_by_system.py,sha256=gjyo_jDyc2xHNNrUwoFqH3Fz51v2eSr3JRHkH0xwVqI,9851
+cidc_api/models/pydantic/stage1/radiotherapy_dose.py,sha256=8TbBqx_BYzwygQE-LxlSEK2ntIAFlTpAq_GS479TabI,3839
+cidc_api/models/pydantic/stage1/response.py,sha256=hq5_eJ2BEaVH8pdU444p3AKHuZMdLsoDZcMA3XQa8Rw,3491
+cidc_api/models/pydantic/stage1/response_by_system.py,sha256=vW0Xj_hYRa3W-JbqJgvty559_B9x5UIySaAOhIDVMOs,9853
 cidc_api/models/pydantic/stage1/specimen.py,sha256=scDekZ-RtXOQTTLburhqT3RF4KM34iY9NAV1wYi_HSg,1281
 cidc_api/models/pydantic/stage1/stem_cell_transplant.py,sha256=XsDVUksqbIprPxHwLlwHGyji4jsIFNMcIk-S0H4rDnQ,1228
 cidc_api/models/pydantic/stage1/surgery.py,sha256=sHPzYMNusYIQrC6gjWopwxo0j9BNOq_Tcl6HKAMvuAQ,2421
@@ -112,14 +113,14 @@ cidc_api/models/pydantic/stage2/__init__.py,sha256=OQRG5wFkNsyAU_0KI1W5PDn8pBDe1
 cidc_api/models/pydantic/stage2/additional_treatment.py,sha256=TFVzjd1NPLSfH9UnL2W3aZhpZSzDsg97j9IK8t882YA,1050
 cidc_api/models/pydantic/stage2/administrative_person.py,sha256=3UYRgGLP7RukwZYTvQEnviDxBvWXj1uqditsoLJOw0s,1552
 cidc_api/models/pydantic/stage2/administrative_role_assignment.py,sha256=kWUciVSnczjejdBSlynsVxSQ4dytDdgw9OxSvgzParg,536
-cidc_api/models/pydantic/stage2/adverse_event.py,sha256=zPy02xoRQeyaXBSmqDdQt4BaRTD6OHBjycVHVtBaAow,3880
+cidc_api/models/pydantic/stage2/adverse_event.py,sha256=OqGMbHu8IgLhYy8wrNSCrCx9pLLFs06KKxveEnP-X3M,3889
 cidc_api/models/pydantic/stage2/arm.py,sha256=I_gyRUkjyA-Eds3BOu-PUlBGdeGeKiG92ERM8WqA2n8,481
 cidc_api/models/pydantic/stage2/baseline_clinical_assessment.py,sha256=5FYvtOVf_nIK1h3xTs3vQgJe2ivQSVHt_wfrTSDgVxU,1119
 cidc_api/models/pydantic/stage2/cohort.py,sha256=NVlgp8D93nXGPDMSyrAJe-QbmrQfudyuTsc400WyOpg,493
 cidc_api/models/pydantic/stage2/comorbidity.py,sha256=dk4SJnkaaju-boexf2SW_rNNGXl-Os2LR5lnIxCb-dA,1413
 cidc_api/models/pydantic/stage2/consent_group.py,sha256=aP_nd0GKK6K7VH-6IZRSDDX2RxFM_j9B36FIRGwysOU,1216
 cidc_api/models/pydantic/stage2/contact.py,sha256=Nfyy5Zn-n9_LiXG-CzC7OsQo7JrzdPcYjZIielpZiM0,883
-cidc_api/models/pydantic/stage2/demographic.py,sha256=X0YoFdK7S8JQ9p_Jm3l-R5HgEl9sZnZVFXrECA2i_zw,6007
+cidc_api/models/pydantic/stage2/demographic.py,sha256=e0iwOFlzeJdBjaFYfruiRMsVhVDSr9BKDh3iJzqnPEw,6054
 cidc_api/models/pydantic/stage2/disease.py,sha256=fwK1FSxTm33BzViGTNsb6AahoDc2BTTXMitCGY3KyDk,7650
 cidc_api/models/pydantic/stage2/exposure.py,sha256=ERoVQLuNWynw2zugh5bVdUT0NzNbJ6fIUmKhPSCQfqk,1306
 cidc_api/models/pydantic/stage2/file.py,sha256=MjZQAII_QqakLBhyfP1bq_Mn6au4yvVuwY0p0A5c664,1336
@@ -134,9 +135,9 @@ cidc_api/models/pydantic/stage2/other_malignancy.py,sha256=V-Jru6uukipocKs7lDbmk
 cidc_api/models/pydantic/stage2/participant.py,sha256=x7gKHaw46-BbqNCgKWPLnp7U8L2pnAkh7hdByKvG_Kk,2185
 cidc_api/models/pydantic/stage2/prior_treatment.py,sha256=G5Cd8PSYRe3gdeApjQWn15QAErB4nDahMKcVRsr88_c,2011
 cidc_api/models/pydantic/stage2/publication.py,sha256=GBuvqBf0lyOoopN1S-3qX310xFxhixk7oDJLuGzLuiw,1817
-cidc_api/models/pydantic/stage2/radiotherapy_dose.py,sha256=c5q0TxPOrYHX9KTd9he5B01zirKgcCxMnvW_7adzCrI,3327
-cidc_api/models/pydantic/stage2/response.py,sha256=rPqfYZhaZRcA1E7dkGOaHe9f2_YIcIg9-KtIPSTh1s8,2886
-cidc_api/models/pydantic/stage2/response_by_system.py,sha256=f8ZnLfNXGJLCfFL1X2jxlSUJPGvJKnOCf6PYbJVMXW8,4909
+cidc_api/models/pydantic/stage2/radiotherapy_dose.py,sha256=784FpvyLA2IY5DQ5ZBnL2EQ_kBihnlmJaXp4zP6g_1o,3333
+cidc_api/models/pydantic/stage2/response.py,sha256=qW8qLVhAA-b_45cIRGyfI6IxYmzbUVh-BDmm-AWdAOg,2886
+cidc_api/models/pydantic/stage2/response_by_system.py,sha256=lRejQ-Gr-AM3czLhQOFOngNOI13QkNPcytQPKRGF3kU,4911
 cidc_api/models/pydantic/stage2/shipment.py,sha256=dsZcDPikCRS3cjr58EGHHJ2gjir78J4cdHh_1SwFyrQ,1595
 cidc_api/models/pydantic/stage2/shipment_specimen.py,sha256=exR7joXsH3Xd-o5vJV_Z-az33Edr8BBm5LCDv01iMI4,488
 cidc_api/models/pydantic/stage2/specimen.py,sha256=JchTeb4QSyPplZmP_gMxEsaIXVDlGI_z85xR5JG4JYY,8524
@@ -145,11 +146,6 @@ cidc_api/models/pydantic/stage2/surgery.py,sha256=53NrET_kNOlXXPP-mH5ecIPrNqDpDQ
 cidc_api/models/pydantic/stage2/therapy_agent_dose.py,sha256=Y2L0vAqkfA5eI2qg7iQrqzCORwbkjyVEsthc6f5HKas,3021
 cidc_api/models/pydantic/stage2/treatment.py,sha256=dr23yeK5x0dKYZV32hgECFe_Y-GkSvdf4P3FdVn6F1Q,2039
 cidc_api/models/pydantic/stage2/trial.py,sha256=PftvFY27s3quVBg1Sau1JdskUSMM0huIeGP-018fi5o,4020
-cidc_api/reference/ctcae.py,sha256=H5JvDQ5R5kYbK37UxjhmXMnKD3d40HmG0DONxfhNxnE,871
-cidc_api/reference/gvhd.py,sha256=r5jbHEa5yos0tmghjiruAeXI-r-4lU81JKCUpMHtO14,194
-cidc_api/reference/icd10cm.py,sha256=K1vbTQB75uAQeKgj0U9izhtMKVb2vqp69_hyx3z_jro,300
-cidc_api/reference/icdo3.py,sha256=A19yNX5-9Gs3X83kXcTlGgsXDTTJ9yR2dxEIoBVmpmU,296
-cidc_api/reference/uberon.py,sha256=BO2mYNDvPzZyLdhL_ZjCyEgHSLHuVifnTJvfktUfVWA,148
 cidc_api/shared/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 cidc_api/shared/assay_handling.py,sha256=zzWSqQ-ddLVzX5IuHvsaSib2H1lnjXpo9LbxaoqaHHs,2897
 cidc_api/shared/auth.py,sha256=EIP9AKokLNrI79Fkpv3P7WdzaddJIsuGGICc1W494X0,9110
@@ -160,8 +156,8 @@ cidc_api/shared/gcloud_client.py,sha256=EJ2ZzZ0gwDOZx18PEzXil4F-jpruacShkVIoecw8
 cidc_api/shared/jose.py,sha256=-qzGzEDAlokEp9E7WtBtQkXyyfPWTYXlwYpCqVJWmqM,1830
 cidc_api/shared/rest_utils.py,sha256=RwR30WOUAYCxL7V-i2totEyeriG30GbBDvBcpLXhM9w,6594
 cidc_api/shared/utils.py,sha256=-gLnzxCR9E6h0plt2xrNisUG5_Y6GhhVwz3DgDIzpvs,367
-nci_cidc_api_modules-1.2.52.dist-info/licenses/LICENSE,sha256=pNYWVTHaYonnmJyplmeAp7tQAjosmDpAWjb34jjv7Xs,1102
-nci_cidc_api_modules-1.2.52.dist-info/METADATA,sha256=LmysKc5tWnhHucOWIA2ZesTGvnWy63VG7a6zw8bRtXQ,40301
-nci_cidc_api_modules-1.2.52.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
-nci_cidc_api_modules-1.2.52.dist-info/top_level.txt,sha256=BSJqF6ura8-bWCKZvarvQEKvidMM05lH0bLQsNOrI0o,14
-nci_cidc_api_modules-1.2.52.dist-info/RECORD,,
+nci_cidc_api_modules-1.2.54.dist-info/licenses/LICENSE,sha256=pNYWVTHaYonnmJyplmeAp7tQAjosmDpAWjb34jjv7Xs,1102
+nci_cidc_api_modules-1.2.54.dist-info/METADATA,sha256=JgFTcBp59nnlVHDexSik2R9bPYPpoeR03NpBKQ1EdP0,40301
+nci_cidc_api_modules-1.2.54.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
+nci_cidc_api_modules-1.2.54.dist-info/top_level.txt,sha256=BSJqF6ura8-bWCKZvarvQEKvidMM05lH0bLQsNOrI0o,14
+nci_cidc_api_modules-1.2.54.dist-info/RECORD,,

cidc_api/reference/ctcae.py

@@ -1,34 +0,0 @@
-# Stubbed to accept any string
-def is_ctcae_event_term(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v
-
-
-# Stubbed to accept any string
-def is_ctcae_event_code(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v
-
-
-# Stubbed to accept any string
-def is_ctcae_severity_grade(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v
-
-
-# Stubbed to accept any string
-def is_ctcae_system_organ_class(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v
-
-
-# Determines if the CTCAE term is one of the "Other, specify" types of terms for which we include
-# additional data about the AE.
-def is_ctcae_other_term(v):
-    if isinstance(v, str):
-        return "Other, specify" in v
-    return False

cidc_api/reference/gvhd.py

@@ -1,6 +0,0 @@
-# Stubbed to accept any string
-# Should support MAGIC and Modified Glucksberg
-def is_gvhd_organ(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v

cidc_api/reference/icd10cm.py

@@ -1,12 +0,0 @@
-# Stubbed to accept any string
-def is_ICD10CM_code(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v
-
-
-# Stubbed to accept any string
-def is_ICD10CM_term(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v

cidc_api/reference/icdo3.py

@@ -1,12 +0,0 @@
-# Stubbed to accept any string
-def is_ICDO3_code(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v
-
-
-# Stubbed to accept any string
-def is_ICDO3_term(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v

cidc_api/reference/uberon.py

@@ -1,5 +0,0 @@
-# Stubbed to accept any string
-def is_uberon_term(v):
-    if not isinstance(v, str):
-        raise TypeError("Value must be a string")
-    return v