nci-cidc-api-modules 1.2.26__py3-none-any.whl → 1.2.29__py3-none-any.whl

cidc_api/reference/ctcae.py

@@ -0,0 +1,34 @@
+# Stubbed to accept any string
+def is_ctcae_event_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ctcae_event_code(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ctcae_severity_grade(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ctcae_system_organ_class(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Determines if the CTCAE term is one of the "Other, specify" types of terms for which we include
+# additional data about the AE.
+def is_ctcae_other_term(v):
+    if isinstance(v, str):
+        return "Other, specify" in v
+    return False

cidc_api/reference/gvhd.py

@@ -0,0 +1,6 @@
+# Stubbed to accept any string
+# Should support MAGIC and Modified Glucksberg
+def is_gvhd_organ(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

cidc_api/reference/icd10cm.py

@@ -0,0 +1,12 @@
+# Stubbed to accept any string
+def is_ICD10CM_code(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ICD10CM_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

cidc_api/reference/icdo3.py

@@ -0,0 +1,12 @@
+# Stubbed to accept any string
+def is_ICDO3_code(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ICDO3_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

cidc_api/reference/uberon.py

@@ -0,0 +1,5 @@
+# Stubbed to accept any string
+def is_uberon_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

{nci_cidc_api_modules-1.2.26.dist-info → nci_cidc_api_modules-1.2.29.dist-info}/METADATA

@@ -1,31 +1,31 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.26
+Version: 1.2.29
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license
 Requires-Python: >=3.13
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: certifi>=2025.10.5
+Requires-Dist: certifi>=2025.11.12
 Requires-Dist: cloud-sql-python-connector[pg8000]>=1.18.5
 Requires-Dist: flask>=3.1.2
 Requires-Dist: flask-migrate>=4.1.0
 Requires-Dist: flask-sqlalchemy>=3.1.1
-Requires-Dist: google-auth==2.41.1
+Requires-Dist: google-auth==2.43.0
 Requires-Dist: google-api-python-client>=2.185.0
 Requires-Dist: google-cloud-bigquery>=3.38.0
-Requires-Dist: google-cloud-pubsub>=2.32.0
+Requires-Dist: google-cloud-pubsub>=2.33.0
 Requires-Dist: google-cloud-secret-manager>=2.25.0
-Requires-Dist: google-cloud-storage>=3.4.1
+Requires-Dist: google-cloud-storage>=3.6.0
 Requires-Dist: jinja2>=3.1.6
-Requires-Dist: marshmallow>=4.0.1
+Requires-Dist: marshmallow>=4.1.0
 Requires-Dist: marshmallow-sqlalchemy>=1.4.2
-Requires-Dist: numpy>=2.3.4
+Requires-Dist: numpy>=2.3.5
 Requires-Dist: packaging>=25.0
 Requires-Dist: pandas>=2.3.3
 Requires-Dist: pyarrow>=22.0.0
-Requires-Dist: pydantic~=2.11.7
+Requires-Dist: pydantic~=2.12.4
 Requires-Dist: python-dotenv>=1.2.1
 Requires-Dist: requests>=2.32.5
 Requires-Dist: sqlalchemy>=2.0.44

{nci_cidc_api_modules-1.2.26.dist-info → nci_cidc_api_modules-1.2.29.dist-info}/RECORD

@@ -88,6 +88,11 @@ cidc_api/models/pydantic/stage2/surgery.py,sha256=OOMDGIt0XA4HHXiQjGTVb0zIsQR9uK
 cidc_api/models/pydantic/stage2/therapy_agent_dose.py,sha256=LgmDXBpDVIR3BxZDHZs4ruX5tSotfan-pU2CUPzddf0,2997
 cidc_api/models/pydantic/stage2/treatment.py,sha256=q8WORTyHSbU7yZvZLvag1dhDc-OAYnY8LPGUbpTzIcw,2015
 cidc_api/models/pydantic/stage2/trial.py,sha256=dYXq-psXUiWVJC2seOndtpMYA1TdIQVbVG8lC9t-oAM,3653
+cidc_api/reference/ctcae.py,sha256=H5JvDQ5R5kYbK37UxjhmXMnKD3d40HmG0DONxfhNxnE,871
+cidc_api/reference/gvhd.py,sha256=r5jbHEa5yos0tmghjiruAeXI-r-4lU81JKCUpMHtO14,194
+cidc_api/reference/icd10cm.py,sha256=K1vbTQB75uAQeKgj0U9izhtMKVb2vqp69_hyx3z_jro,300
+cidc_api/reference/icdo3.py,sha256=A19yNX5-9Gs3X83kXcTlGgsXDTTJ9yR2dxEIoBVmpmU,296
+cidc_api/reference/uberon.py,sha256=BO2mYNDvPzZyLdhL_ZjCyEgHSLHuVifnTJvfktUfVWA,148
 cidc_api/shared/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 cidc_api/shared/auth.py,sha256=PHqmVGkqDjbmUofytVFwD_9ssgUomESl3fFtFHPwZYQ,9062
 cidc_api/shared/email_layout.html,sha256=pBoTNw3ACHH-ncZFaNvcy5bXMqPwizR78usb0uCYtIc,7670
@@ -97,8 +102,8 @@ cidc_api/shared/gcloud_client.py,sha256=ovXGS2ynaBgB_23prj23H10GNN4fectiVF7Hj4LJ
 cidc_api/shared/jose.py,sha256=-qzGzEDAlokEp9E7WtBtQkXyyfPWTYXlwYpCqVJWmqM,1830
 cidc_api/shared/rest_utils.py,sha256=RwR30WOUAYCxL7V-i2totEyeriG30GbBDvBcpLXhM9w,6594
 cidc_api/shared/utils.py,sha256=FdZJiynmh6BIzWyCTcUAcUMKCAtzEyp_HLdXEticNcI,237
-nci_cidc_api_modules-1.2.26.dist-info/licenses/LICENSE,sha256=pNYWVTHaYonnmJyplmeAp7tQAjosmDpAWjb34jjv7Xs,1102
-nci_cidc_api_modules-1.2.26.dist-info/METADATA,sha256=27WvUlfFUiLHQKtFPdFu2DKBiTrgZxmFRKIhup73WG4,39724
-nci_cidc_api_modules-1.2.26.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-nci_cidc_api_modules-1.2.26.dist-info/top_level.txt,sha256=rNiRzL0lJGi5Q9tY9uSoMdTbJ-7u5c_D2E86KA94yRA,9
-nci_cidc_api_modules-1.2.26.dist-info/RECORD,,
+nci_cidc_api_modules-1.2.29.dist-info/licenses/LICENSE,sha256=pNYWVTHaYonnmJyplmeAp7tQAjosmDpAWjb34jjv7Xs,1102
+nci_cidc_api_modules-1.2.29.dist-info/METADATA,sha256=6sIZFWY_C3G2QtlmxjFGqMuOcbjmuyBxXr0FI3IR9Uw,39725
+nci_cidc_api_modules-1.2.29.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+nci_cidc_api_modules-1.2.29.dist-info/top_level.txt,sha256=rNiRzL0lJGi5Q9tY9uSoMdTbJ-7u5c_D2E86KA94yRA,9
+nci_cidc_api_modules-1.2.29.dist-info/RECORD,,