napistu 0.3.1__py3-none-any.whl → 0.3.1.dev1__py3-none-any.whl

napistu/__init__.py

@@ -3,10 +3,8 @@ from __future__ import annotations
 from importlib.metadata import PackageNotFoundError
 from importlib.metadata import version
 
-__version__ = "0.2.2"
-
 try:
-    __version__ = version("calicolabs-cpr")
+    __version__ = version("napistu")
 except PackageNotFoundError:
     # package is not installed
     pass

napistu/mcp/constants.py

@@ -104,7 +104,7 @@ REPOS_WITH_WIKI = [PACKAGE_DEFS.GITHUB_PROJECT_REPO]
 TUTORIAL_URLS = {
     "adding_data_to_graphs": "https://raw.githubusercontent.com/napistu/napistu/refs/heads/main/tutorials/adding_data_to_graphs.ipynb",
     "downloading_pathway_data": "https://raw.githubusercontent.com/napistu/napistu/refs/heads/main/tutorials/downloading_pathway_data.ipynb",
-    "formatting_sbml_dfs_as_napistu_graphs": "https://raw.githubusercontent.com/napistu/napistu/refs/heads/main/tutorials/formatting_sbml_dfs_as_napistu_graphs.ipynb",
+    "creating_a_napistu_graph": "https://raw.githubusercontent.com/napistu/napistu/refs/heads/main/tutorials/creating_a_napistu_graph.ipynb",
     "merging_models_into_a_consensus": "https://raw.githubusercontent.com/napistu/napistu/refs/heads/main/tutorials/merging_models_into_a_consensus.ipynb",
     "r_based_network_visualization": "https://raw.githubusercontent.com/napistu/napistu/refs/heads/main/tutorials/r_based_network_visualization.ipynb",
     "suggesting_mechanisms_with_networks": "https://raw.githubusercontent.com/napistu/napistu/refs/heads/main/tutorials/suggesting_mechanisms_with_networks.ipynb",

{napistu-0.3.1.dist-info → napistu-0.3.1.dev1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: napistu
-Version: 0.3.1
+Version: 0.3.1.dev1
 Summary: Connecting high-dimensional data to curated pathways
 Home-page: https://github.com/napistu/napistu-py
 Author: Sean Hackett

{napistu-0.3.1.dist-info → napistu-0.3.1.dev1.dist-info}/RECORD

@@ -1,4 +1,4 @@
-napistu/__init__.py,sha256=HEXcB6w8PCTD-tm4rq7AoFi7ufZNDuoG3EoM0kz9aPY,269
+napistu/__init__.py,sha256=dFXAhIqlTLJMwowS4BUDT08-Vy3Q0u1L0CMCErSZT1Y,239
 napistu/__main__.py,sha256=1O_ZyCqNeHcyuL4rbbz6R7_jnPOAamKtTNXZ68gSA7U,28624
 napistu/consensus.py,sha256=UbKKSLP1O46e3Rk8d_aqNlhRHeR3sZRztAgIm7-XK6Y,69960
 napistu/constants.py,sha256=Wb1eir8DKSAjukNPknNkKTS4kQSqZjTcTjFaOYNyrC8,15317
@@ -41,7 +41,7 @@ napistu/mcp/codebase.py,sha256=q3L76xzpIalcw1ZBy2Zt59G22rX1knila__QdQMh-OA,7950
 napistu/mcp/codebase_utils.py,sha256=r1nbDmGzq-NaH9cT11jC53mEjszQpwQ0uZUJkMHvgVs,10567
 napistu/mcp/component_base.py,sha256=nTa8RMW2rRBpFXfhUSHMgaA0sUS2Vy-ERZe__OB-R6Y,4461
 napistu/mcp/config.py,sha256=2CMUlcYhS0TMziAHFfmwQXpR1jx1qxSnZoP7UcNKYBk,7149
-napistu/mcp/constants.py,sha256=XlU5P9uY3LfRPjpSbe9xU35LkcBShP-oRNk_iQ2CqQk,3945
+napistu/mcp/constants.py,sha256=XJuWS-ORCOFU0xi80lRfWo0-MO4CIWYvmrUM7UwwGCs,3919
 napistu/mcp/documentation.py,sha256=BduopA2YiJQ43Gz_EtK3JGAE2HvFhuknj_pB1KaLBnQ,10738
 napistu/mcp/documentation_utils.py,sha256=dxzyu2pNxqlvCWJ2Au87_Q1BlmKrVnOo3qyTctoSogc,5873
 napistu/mcp/execution.py,sha256=ATwMNhrZTZHQCvWPAwmC95B-Yj9QjMyVR_1kqop5dak,16049
@@ -81,7 +81,7 @@ napistu/rpy2/rids.py,sha256=AfXLTfTdonfspgAHYO0Ph7jSUWv8YuyT8x3fyLfAqc8,3413
 napistu/scverse/__init__.py,sha256=Lgxr3iMQAkTzXE9BNz93CndNP5djzerLvmHM-D0PU3I,357
 napistu/scverse/constants.py,sha256=0iAkhyJUIeFGHdLLU3fCaEU1O3Oix4qAsxr3CxGTjVs,653
 napistu/scverse/loading.py,sha256=jqiE71XB-wdV50GyZrauFNY0Lai4bX9Fm2Gv80VR8t8,27016
-napistu-0.3.1.dist-info/licenses/LICENSE,sha256=kW8wVT__JWoHjl2BbbJDAZInWa9AxzJeR_uv6-i5x1g,1063
+napistu-0.3.1.dev1.dist-info/licenses/LICENSE,sha256=kW8wVT__JWoHjl2BbbJDAZInWa9AxzJeR_uv6-i5x1g,1063
 tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 tests/conftest.py,sha256=XVkd0tQywhnf2cgab7fIjBo3NlaTVX3cO8HaRS2jIwM,3190
 tests/test_consensus.py,sha256=3dJvvPsPG7bHbw_FY4Pm647N_Gt_Ud9157OKYfPCUd4,9502
@@ -126,8 +126,8 @@ tests/test_uncompartmentalize.py,sha256=nAk5kfAVLU9a2VWe2x2HYVcKqj-EnwmwddERIPRa
 tests/test_utils.py,sha256=JRJFmjDNZpjG59a-73JkTyGqa_a7Z8d0fE2cZt0CRII,22580
 tests/utils.py,sha256=SoWQ_5roJteFGcMaOeEiQ5ucwq3Z2Fa3AAs9iXHTsJY,749
 tests/test_data/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-napistu-0.3.1.dist-info/METADATA,sha256=Dy28usEPYFT-rbmyJSn2lvcNhc7tU2kcCZsj8oTlRWQ,3413
-napistu-0.3.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-napistu-0.3.1.dist-info/entry_points.txt,sha256=_QnaPOvJNA3IltxmZgWIiBoen-L1bPYX18YQfC7oJgQ,41
-napistu-0.3.1.dist-info/top_level.txt,sha256=Gpvk0a_PjrtqhYcQ9IDr3zR5LqpZ-uIHidQMIpjlvhY,14
-napistu-0.3.1.dist-info/RECORD,,
+napistu-0.3.1.dev1.dist-info/METADATA,sha256=xBdE_PoEkP5RZVbK_GFot3AW7gnZZDFLAcD7F9rdKfc,3418
+napistu-0.3.1.dev1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+napistu-0.3.1.dev1.dist-info/entry_points.txt,sha256=_QnaPOvJNA3IltxmZgWIiBoen-L1bPYX18YQfC7oJgQ,41
+napistu-0.3.1.dev1.dist-info/top_level.txt,sha256=Gpvk0a_PjrtqhYcQ9IDr3zR5LqpZ-uIHidQMIpjlvhY,14
+napistu-0.3.1.dev1.dist-info/RECORD,,