napistu 0.2.5.dev7__py3-none-any.whl → 0.3.1__py3-none-any.whl

napistu/scverse/__init__.py

@@ -0,0 +1,15 @@
+from __future__ import annotations
+
+from importlib.metadata import PackageNotFoundError
+from importlib.metadata import version
+
+import mudata
+
+# Configure mudata to use new behavior and suppress warnings
+mudata.set_options(pull_on_update=False)
+
+try:
+    __version__ = version("napistu")
+except PackageNotFoundError:
+    # package is not installed
+    pass

napistu/scverse/constants.py

@@ -0,0 +1,28 @@
+from types import SimpleNamespace
+
+ADATA = SimpleNamespace(
+    LAYERS="layers",
+    OBS="obs",
+    OBSM="obsm",
+    OBSP="obsp",
+    VAR="var",
+    VARM="varm",
+    VARP="varp",
+    X="X",
+)
+
+ADATA_DICTLIKE_ATTRS = {ADATA.LAYERS, ADATA.OBSM, ADATA.OBSP, ADATA.VARM, ADATA.VARP}
+ADATA_IDENTITY_ATTRS = {ADATA.OBS, ADATA.VAR, ADATA.X}
+ADATA_FEATURELEVEL_ATTRS = {ADATA.LAYERS, ADATA.VAR, ADATA.VARM, ADATA.X}
+ADATA_ARRAY_ATTRS = {
+    ADATA.LAYERS,
+    ADATA.OBSM,
+    ADATA.OBSP,
+    ADATA.VARM,
+    ADATA.VARP,
+    ADATA.X,
+}
+
+SCVERSE_DEFS = SimpleNamespace(ADATA="adata", MDATA="mdata")
+
+VALID_MUDATA_LEVELS = {SCVERSE_DEFS.ADATA, SCVERSE_DEFS.MDATA}