napari-memmap-tiff 1.0.0__py3-none-any.whl → 1.1.0__py3-none-any.whl

napari_memmap_tiff/_version.py

@@ -17,5 +17,5 @@ __version__: str
 __version_tuple__: VERSION_TUPLE
 version_tuple: VERSION_TUPLE
 
-__version__ = version = '1.0.0'
-__version_tuple__ = version_tuple = (1, 0, 0)
+__version__ = version = '1.1.0'
+__version_tuple__ = version_tuple = (1, 1, 0)

napari_memmap_tiff/_widget.py

@@ -1,6 +1,7 @@
 from typing import TYPE_CHECKING
 
 import numpy as np
+import tifffile
 from imageio.config.extensions import extension_list
 from imageio.config.plugins import PluginConfig, known_plugins
 from imageio.plugins.tifffile_v3 import TifffilePlugin
@@ -12,8 +13,12 @@ if TYPE_CHECKING:
 
 class MemmapTifffilePlugin(TifffilePlugin):
 
-    def read(self, *args, **kwargs) -> np.ndarray:
-        return super().read(*args, **kwargs, out="memmap")
+    def read(
+        self, *, index: int = None, page: int = None, **kwargs
+    ) -> np.ndarray:
+        if index in (Ellipsis, None) and page is None:
+            return tifffile.memmap(self.request.get_local_filename())
+        return super().read(index=index, page=page, out="memmap", **kwargs)
 
 
 @magic_factory(auto_call=True, persist=False)
@@ -26,6 +31,11 @@ def memmap_config_widget(
     :param enable_memory_map: If enabled, tiff or tif files will be loaded as
         memory mapped data directly from disk, instead of loading it fully into
         memory at once.
+
+        Closing and re-opening the plugin removes the checkmark, but it stays
+        set to the last value until napari is re-opened when it's reset. So
+        check and then uncheck the box to disable, after hiding / showing the
+        plugin.
     """
     if enable_memory_map:
         if "tifffile_memmap" in known_plugins:

{napari_memmap_tiff-1.0.0.dist-info → napari_memmap_tiff-1.1.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: napari-memmap-tiff
-Version: 1.0.0
+Version: 1.1.0
 Summary: When installed and enabled in the options, it adds an option that when enabled will make napari load tiffs via memory mapping instead of fully into RAM.
 Author: Matthew Einhorn
 Author-email: matt@einhorn.dev

napari_memmap_tiff-1.1.0.dist-info/RECORD

@@ -0,0 +1,12 @@
+napari_memmap_tiff/__init__.py,sha256=QjsJIUwEYceKGbOvURi2pHFOa2XFhBXiHyzzPsgnM4I,181
+napari_memmap_tiff/_version.py,sha256=UNO7UaKPam6Zugzw6NMt_RQBnRzrv9GVeKUjWt-tl6I,511
+napari_memmap_tiff/_widget.py,sha256=4MZCzAXnbOq-FNQP_h80TaAFqJQFT2oD0K518HRkKKk,2164
+napari_memmap_tiff/napari.yaml,sha256=WW43IHcG3Hi_8LEgUVopoUrsQsXd-ZteKOcWj3fKYn8,612
+napari_memmap_tiff/_tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+napari_memmap_tiff/_tests/test_widget.py,sha256=rltLZlP8bLvyRK4WVpX4I8fAjSRTQzBpgcXxTviz8A0,317
+napari_memmap_tiff-1.1.0.dist-info/licenses/LICENSE,sha256=AKMeoFqPgD4lKUkLDHO1Hj5-Noqm2LFV8_qK6VlposU,1083
+napari_memmap_tiff-1.1.0.dist-info/METADATA,sha256=7PBN99YSDpW5vIiIEAa4up4sa1SvxtPOCnFqEz8G4U0,6339
+napari_memmap_tiff-1.1.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+napari_memmap_tiff-1.1.0.dist-info/entry_points.txt,sha256=F2ggm_mIQqjB0RzmAKAAWYA6Ut2NKT25xlUz0i5nvLo,70
+napari_memmap_tiff-1.1.0.dist-info/top_level.txt,sha256=xgp7Jn5_5Cyj_qhu67lx2Wz176Gp4aecnmVF95jB_K4,19
+napari_memmap_tiff-1.1.0.dist-info/RECORD,,

napari_memmap_tiff-1.0.0.dist-info/RECORD

@@ -1,12 +0,0 @@
-napari_memmap_tiff/__init__.py,sha256=QjsJIUwEYceKGbOvURi2pHFOa2XFhBXiHyzzPsgnM4I,181
-napari_memmap_tiff/_version.py,sha256=fo5PXsZuloQZu3LdpIFTUAXvJmY2L9N5sNGe2tvdU98,511
-napari_memmap_tiff/_widget.py,sha256=hEotDzhU3CmwV-gdB9SpZ1824b7v2rtyW4rgWWUORDA,1710
-napari_memmap_tiff/napari.yaml,sha256=WW43IHcG3Hi_8LEgUVopoUrsQsXd-ZteKOcWj3fKYn8,612
-napari_memmap_tiff/_tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-napari_memmap_tiff/_tests/test_widget.py,sha256=rltLZlP8bLvyRK4WVpX4I8fAjSRTQzBpgcXxTviz8A0,317
-napari_memmap_tiff-1.0.0.dist-info/licenses/LICENSE,sha256=AKMeoFqPgD4lKUkLDHO1Hj5-Noqm2LFV8_qK6VlposU,1083
-napari_memmap_tiff-1.0.0.dist-info/METADATA,sha256=WEeWqtbFQKaRFOI-qSwtSSNoW7HSGEfpieGmRcjer-E,6339
-napari_memmap_tiff-1.0.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-napari_memmap_tiff-1.0.0.dist-info/entry_points.txt,sha256=F2ggm_mIQqjB0RzmAKAAWYA6Ut2NKT25xlUz0i5nvLo,70
-napari_memmap_tiff-1.0.0.dist-info/top_level.txt,sha256=xgp7Jn5_5Cyj_qhu67lx2Wz176Gp4aecnmVF95jB_K4,19
-napari_memmap_tiff-1.0.0.dist-info/RECORD,,