nabu 2024.1.8__py3-none-any.whl → 2024.1.8.post1__py3-none-any.whl

nabu/__init__.py

@@ -1,4 +1,4 @@
-__version__ = "2024.1.8"
+__version__ = "2024.1.8.post1"
 __nabu_modules__ = [
     "app",
     "cuda",

nabu/pipeline/fullfield/chunked.py

@@ -577,7 +577,7 @@ class ChunkedPipeline:
                 sample_detector_dist,
                 angles=-options["angles"],
                 rot_center=options["rotation_axis_position"],
-                axis_correction=-options["axis_correction"],
+                axis_correction=(-options["axis_correction"] if options["axis_correction"] is not None else None),
                 pixel_size=1,
                 scale_factor=1.0 / options["voxel_size_cm"][0],
             )

nabu/reconstruction/tests/test_cone.py

@@ -281,7 +281,7 @@ class TestCone:
             # Reconstruct with horizontal shifts
             cone_reconstructor_with_correction = ConebeamReconstructor(
                 *reconstructor_args,
-                axis_corrections=shifts,
+                axis_correction=shifts,
                 **reconstructor_kwargs,
             )
 

nabu/stitching/overlap.py

@@ -301,7 +301,7 @@ def check_overlaps(frames: Union[tuple, numpy.ndarray], positions: tuple, axis:
         if raise_error:
             raise ValueError(error_msg)
         else:
-            _logger.error(raise_error)
+            _logger.error(error_msg)
 
     # convert each frame to appropriate bounding box according to the axis
     def convert_to_bb(frame: numpy.ndarray, position: tuple, axis: int):

{nabu-2024.1.8.dist-info → nabu-2024.1.8.post1.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: nabu
-Version: 2024.1.8
+Version: 2024.1.8.post1
 Summary: Nabu - Tomography software
 Author-email: Pierre Paleo <pierre.paleo@esrf.fr>, Henri Payno <henri.payno@esrf.fr>, Alessandro Mirone <mirone@esrf.fr>, Jérôme Lesaint <jerome.lesaint@esrf.fr>
 Maintainer-email: Pierre Paleo <pierre.paleo@esrf.fr>

{nabu-2024.1.8.dist-info → nabu-2024.1.8.post1.dist-info}/RECORD

@@ -1,8 +1,7 @@
 doc/conf.py,sha256=3xtCarCHrXPr50GbeRDuH-o3Jzojw7mpr7vpGfZPLAE,3787
 doc/create_conf_doc.py,sha256=IVOdP70KvbW9WS_UQu3Iyd0YfS60E2fJ5IDtQ_s4cDw,1143
-doc/doc_config.py,sha256=anqeOVjqE2e7eVzg7yuh9dvIneTkrA5doGl1cVBqT7Q,730
 doc/get_mathjax.py,sha256=VIvKRCdDuF2VoY8JD3mSey9XX13AZMmwTJBHdt1tUs4,1012
-nabu/__init__.py,sha256=DO4fHjlr5q2r3IDpkSpuzsOIMuHK5R3I2w91UQaUEdY,270
+nabu/__init__.py,sha256=a500qUas56fWNfHAyhTfYfk9_vKjLbDgkoE1a-bLz_E,276
 nabu/tests.py,sha256=cew9OY2uTyncHI_HM32W8CP6B1GTGKaOW65XtMEqs7o,1417
 nabu/testutils.py,sha256=qqtGgkIhpOpXhgeoXlqCb91Rx-JlI4ALaDF6nt8YRRk,13298
 nabu/utils.py,sha256=w-xfRb6TFQpS-tao6nlvfmr962pmeec-WH1GltSUCrk,23767
@@ -32,6 +31,7 @@ nabu/app/shrink_dataset.py,sha256=P9dorO0Q-gPAWgSHyZi3XQp4jkMTJacDYzNvJY4oh98,35
 nabu/app/stitching.py,sha256=Ibp1oVokLVMz-VX762j1C0E88Di0YJvRt-b8NjGoe7g,3310
 nabu/app/utils.py,sha256=XUBRWDmth4i3BZHd27rfarFAUP7OEcsMeVmDJ6T4EXA,1178
 nabu/app/validator.py,sha256=IR-DcUV5h1Fc5CChBfBIaglrGpfKNICX7tGirAroMiw,3368
+nabu/app/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/app/tests/test_reduce_dark_flat.py,sha256=T-_zyzD0-f2c5Z-tlzmRF5p3vPtyL2RFb-D5fIYYEoM,2641
 nabu/cuda/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/cuda/convolution.py,sha256=n8KsJ7IZdPOs_K5QZC6qblnOvIKYwxtdt03oNa0GiMU,241
@@ -136,7 +136,7 @@ nabu/pipeline/processconfig.py,sha256=O0phgvfWtL9bg3_GE3cw9MZXS8PUy8z2rzhpoqP9U8
 nabu/pipeline/utils.py,sha256=NONAgBfTfUYvBNfoTqD33MAYaPZyCJL10SnR6B0lLec,3462
 nabu/pipeline/writer.py,sha256=0ts40VNN3RiRURvZ2gNqsigsAJuwcjnYF4RJ15qaMpI,7558
 nabu/pipeline/fullfield/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-nabu/pipeline/fullfield/chunked.py,sha256=IElD8g_KtYS7VOXuIEsRbdb9fMmtpB_AK7mAyejbEs0,37125
+nabu/pipeline/fullfield/chunked.py,sha256=2kDbDtg86H8edLjNp-TYwQMiTZvMx0UJ_3Wbkaet4Fo,37179
 nabu/pipeline/fullfield/chunked_cuda.py,sha256=aGzjY8MX6OL8auEj6Y0RfOGCmFnczsdfj6-8Net5AbQ,5645
 nabu/pipeline/fullfield/computations.py,sha256=VpIURVXh8EpNSfait_AIFM4Ci-GK_546Wkb-Wn9r31Y,9935
 nabu/pipeline/fullfield/dataset_validator.py,sha256=8B2lB9j7elF_NmOOOyr8UADVfC15Oofzy2AyWoPufQM,3265
@@ -239,7 +239,7 @@ nabu/reconstruction/sinogram.py,sha256=KTSGP_JJABf4Yr9l628HPbyWsBnpbnyGKyPEq3ZrP
 nabu/reconstruction/sinogram_cuda.py,sha256=wS84AIy3T00d1kTtuJOQmA3hktbDVs4ybwB9haiBcoY,10623
 nabu/reconstruction/sinogram_opencl.py,sha256=p793N26VknU8KIZLtDgFY6HNx0TylemZ1YL4WKD3fHs,1403
 nabu/reconstruction/tests/__init__.py,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
-nabu/reconstruction/tests/test_cone.py,sha256=xrFsIFGmpE9txpR3d93upF2S4yS_53IjZdZEKaaYspg,14313
+nabu/reconstruction/tests/test_cone.py,sha256=oik4A75iJlvEACj63wpcxX1BfihHChMa1KAi_KbeRK0,14312
 nabu/reconstruction/tests/test_deringer.py,sha256=C5wj6RNzmpt_Cry4fonC8KXWvgPpcXfRbG8Bex_30S4,8380
 nabu/reconstruction/tests/test_fbp.py,sha256=p80zPCZkgJpERpqG5HHfbtbHBeqJUT8WY-q6FXOJJ7M,10053
 nabu/reconstruction/tests/test_filtering.py,sha256=PFJLQMDBQo-UuS_CfKrWZ_DdHarmVlcbsiZ_kmToWXY,4782
@@ -268,7 +268,7 @@ nabu/stitching/alignment.py,sha256=MSj-6npGfUnD3C5R5rqKwTogVRUDPmJuEZkPG9hMiUY,6
 nabu/stitching/config.py,sha256=t7mkRrkdHKMz0x-lg0f5-IOAO829A6BvKH8WUAuSAps,51333
 nabu/stitching/definitions.py,sha256=RyqzZY3KLwN4j0SkOFA-T1aicPbO2jBrqfWdz-1djxk,130
 nabu/stitching/frame_composition.py,sha256=OGM9cLrLfEP5_hvhDbNq_zr2wdMeAuTTNlVqZk-qVBU,5889
-nabu/stitching/overlap.py,sha256=eXAKsILS5jwqFY62JhDijeNW8H50rP-yjdUUGqjj0aY,15700
+nabu/stitching/overlap.py,sha256=YbPon4_n4lT678F1aFSHx-ButcSYYqlBFjDqfNA77T4,15698
 nabu/stitching/sample_normalization.py,sha256=_radin_wxnuD3MMmZNAOKA__aPa2z3ss4TFbZeocpXc,2069
 nabu/stitching/slurm_utils.py,sha256=sZ-VQPh_YlJ1Lkh7ap8qxII0rBpZryMyoxE5Xn557t8,8906
 nabu/stitching/utils.py,sha256=kMn2JEMDhcBQMweSlM0rUd-037H7iNUURTFMhXOTzC8,23651
@@ -288,9 +288,9 @@ nabu/thirdparty/pore3d_deringer_munch.py,sha256=o4bisnFc-wMjuohWBT8wgWmfNehPQGtC
 nabu/thirdparty/tomocupy_remove_stripe.py,sha256=VgXHr2tzTAAGZix5pwhFfbPxj4tt3yXBcjCPNQSLPAg,22810
 nabu/thirdparty/tomopy_phase.py,sha256=hK4oPpkogLOhv23XzzEXQY2u3r8fJvASY_bINVs6ERE,8634
 nabu/thirdparty/tomwer_load_flats_darks.py,sha256=ZNoVAinUb_wGYbfvs_4BVnWsjsQmNxSvCh1bWhR2WWg,5611
-nabu-2024.1.8.dist-info/LICENSE,sha256=1eAIPSnEsnSFNUODnLtNtQTs76exG3ZxJ1DJR6zoUBA,1066
-nabu-2024.1.8.dist-info/METADATA,sha256=qlqJl5Qy-ajxs4_j-PfKcIvwds6vYOT9j8V21egtvQs,5237
-nabu-2024.1.8.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
-nabu-2024.1.8.dist-info/entry_points.txt,sha256=cJKGkBeykVL7uK3E4R0RLRqMXifTL2qdO573syPAvJc,1288
-nabu-2024.1.8.dist-info/top_level.txt,sha256=fsm_N3eXLRZk2QXF9OSKPNDPFXOz8FAQjHh5avT3dok,9
-nabu-2024.1.8.dist-info/RECORD,,
+nabu-2024.1.8.post1.dist-info/LICENSE,sha256=1eAIPSnEsnSFNUODnLtNtQTs76exG3ZxJ1DJR6zoUBA,1066
+nabu-2024.1.8.post1.dist-info/METADATA,sha256=ucBXicrROOJGGiOF06Zau08R8rykepXbor0Jg6YGaGY,5243
+nabu-2024.1.8.post1.dist-info/WHEEL,sha256=5sUXSg9e4bi7lTLOHcm6QEYwO5TIF1TNbTSVFVjcJcc,92
+nabu-2024.1.8.post1.dist-info/entry_points.txt,sha256=cJKGkBeykVL7uK3E4R0RLRqMXifTL2qdO573syPAvJc,1288
+nabu-2024.1.8.post1.dist-info/top_level.txt,sha256=fsm_N3eXLRZk2QXF9OSKPNDPFXOz8FAQjHh5avT3dok,9
+nabu-2024.1.8.post1.dist-info/RECORD,,

{nabu-2024.1.8.dist-info → nabu-2024.1.8.post1.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.42.0)
+Generator: bdist_wheel (0.41.1)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

doc/doc_config.py

@@ -1,32 +0,0 @@
-#!/usr/bin/env python
-
-from nabu.resources.nabu_config import nabu_config
-
-
-def generate(file_):
-    def write(content):
-        print(content, file=file_)
-    for section, values in nabu_config.items():
-        if section == "about":
-            continue
-        write("## %s\n" % section)
-        for key, val in values.items():
-            if val["type"] == "unsupported":
-                continue
-            write(val["help"] + "\n")
-            write(
-                "```ini\n%s = %s\n```"
-                % (key, val["default"])
-            )
-
-
-
-if __name__ == "__main__":
-
-    import sys, os
-    print(os.path.abspath(__file__))
-    exit(0)
-
-    fname = "/tmp/test.md"
-    with open(fname, "w") as f:
-        generate(f)