nabu 2022.3.0a1__py3-none-any.whl → 2023.1.0a2__py3-none-any.whl

nabu/resources/templates/bm05_pag.conf

@@ -0,0 +1,34 @@
+#
+# ESRF BM05 phase contrast
+#
+
+#
+# Write here your custom configuration as a python dictionary.
+# Any parameter not present will take the default value.
+#
+
+[preproc]
+
+flatfield = 1
+take_logarithm = 1
+
+
+
+[phase]
+
+method = paganin
+delta_beta = 100
+
+
+
+[reconstruction]
+
+rotation_axis_position = sliding-window
+enable_halftomo = auto
+clip_outer_circle = 1
+centered_axis = 1
+
+
+[output]
+
+location =

nabu/resources/templates/id16_ctf.conf

@@ -13,7 +13,8 @@ flatfield = 1
 flat_distortion_correction_enabled = 0
 flat_distortion_params = tile_size=100; interpolation_kind='linear'; padding_mode='edge'; correction_spike_threshold=None
 take_logarithm = 0
-
+ccd_filter_enabled = 1
+ccd_filter_threshold = 0.04
 
 
 [phase]

nabu/resources/tests/test_nxflatfield.py

@@ -47,7 +47,6 @@ def bootstrap(request):
 
 @pytest.mark.usefixtures("bootstrap")
 class TestNXFlatField:
-
     _reduction_func = {"flats": np.median, "darks": np.mean}
 
     def get_nx_filename(self):

nabu/resources/tests/test_units.py

@@ -4,7 +4,6 @@ from nabu.resources.utils import get_quantities_and_units
 
 
 class TestUnits:
-
     expected_results = {
         "distance = 1 m ; pixel_size = 2.0 um": {"distance": 1.0, "pixel_size": 2e-6},
         "distance = 1 m ; pixel_size = 2.6 micrometer": {"distance": 1.0, "pixel_size": 2.6e-6},

nabu/stitching/frame_composition.py

@@ -36,7 +36,13 @@ class ZFrameComposition(_FrameCompositionBase):
     def compose(self, output_frame: numpy.ndarray, input_frames: tuple):
         if not output_frame.ndim == 2:
             raise TypeError(f"output_frame is expected to be 2D and not {output_frame.ndim}")
-        for (global_start_y, global_end_y, local_start_y, local_end_y, input_frame,) in zip(
+        for (
+            global_start_y,
+            global_end_y,
+            local_start_y,
+            local_end_y,
+            input_frame,
+        ) in zip(
             self.global_start_y,
             self.global_end_y,
             self.local_start_y,

{nabu-2022.3.0a1.dist-info → nabu-2023.1.0a2.dist-info}/METADATA

@@ -1,14 +1,11 @@
 Metadata-Version: 2.1
 Name: nabu
-Version: 2022.3.0a1
+Version: 2023.1.0a2
 Summary: Nabu - Tomography software
-Home-page: UNKNOWN
 Author: Pierre Paleo
 Author-email: pierre.paleo@esrf.fr
 Maintainer: Pierre Paleo
 Maintainer-email: pierre.paleo@esrf.fr
-License: UNKNOWN
-Platform: UNKNOWN
 License-File: LICENSE
 Requires-Dist: psutil
 Requires-Dist: pytest
@@ -16,7 +13,7 @@ Requires-Dist: numpy (>1.9.0)
 Requires-Dist: scipy
 Requires-Dist: silx (>=0.15.0)
 Requires-Dist: h5py (>=3.0)
-Requires-Dist: tomoscan (>=1.0.6)
+Requires-Dist: tomoscan (>=1.2.1)
 Requires-Dist: tifffile
 Provides-Extra: doc
 Requires-Dist: sphinx ; extra == 'doc'
@@ -32,5 +29,3 @@ Requires-Dist: pycuda ; extra == 'full'
 Requires-Dist: scikit-cuda ; extra == 'full'
 Requires-Dist: pycudwt ; extra == 'full'
 
-UNKNOWN
-

{nabu-2022.3.0a1.dist-info → nabu-2023.1.0a2.dist-info}/RECORD

@@ -1,13 +1,15 @@
-nabu/__init__.py,sha256=RwhIPsNAc1zkcrDD0sUuP_zImBDd0M2YLz5-60T2L4g,238
+nabu/__init__.py,sha256=k6HChLxiTiiWaNSvV3_-R7lUf36ntgZfWbjjQg4WVj4,242
 nabu/tests.py,sha256=hzdcjA8MvW_Uxtc5onQ1IpwQotdVPt1KJNEH25uh9JY,1400
 nabu/testutils.py,sha256=nOzearGltWG2fPcJt4JyI_Y4_wzGt2dg_ssaLrH9bHA,10857
 nabu/utils.py,sha256=3o3Xk40xG1ghI6oAuNHJBCXjWcqxAacYijnAD52VDMg,21956
 nabu/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-nabu/app/bootstrap.py,sha256=sIE0cI1CdWcFYckHaN16nk_sL0d85-D5ngGNMSbQrQ8,3040
+nabu/app/bootstrap.py,sha256=kufLeIHgFuDH8S5I9nEodwujNWm7hoTMmPYngXqsXts,3233
 nabu/app/bootstrap_stitching.py,sha256=VxXrgwP7E_k1BhBQ94bEdnxWTQFs-cE5LewlHFr4JI8,733
-nabu/app/cast_volume.py,sha256=LEHbYosfzYEFSr-CemnAWvvldAPqt2ZN1LVE9AT84B4,8652
-nabu/app/cli_configs.py,sha256=J_3vHdsXcH-Ww8EXlSBuioPOVeZO9pVpRufhNMV_kx0,11163
+nabu/app/cast_volume.py,sha256=kreoo5VIOIYoXRHl5cDBO6t_gBL3PP86nAP1Md0xUkU,8921
+nabu/app/cli_configs.py,sha256=BRMW8G7SCLKR_hVy1gxYuBwJy_xdEhMvQ3wh9kzRQB0,14128
 nabu/app/compare_volumes.py,sha256=z9GpnFgcS260Ti8o-DgyUtQgPFrO2CNGhY5aHT7dze8,3327
+nabu/app/composite_cor.py,sha256=MRQqlPziX_ICp5d19OK_6dEJlk8EjZZ-sX7V5tNh_sM,3369
+nabu/app/create_distortion_map_from_poly.py,sha256=okGvVAZQhspyNnYwoG9D20ih_mn1t4frBn2WzvF-yiE,4665
 nabu/app/double_flatfield.py,sha256=uGLWleArcWLSRE6LgQJgI548BlT0W8ruIl-P_nrtdvg,5437
 nabu/app/fullfield.py,sha256=O7dDqsiNKST7Wl9Hx7TH34DPUVLhK0yFXgkEvzCNGdg,258
 nabu/app/fullfield_cuda.py,sha256=3uViXsnj6Yh_yGs3uSkjDMdFZMqW8HehXreQj47HFhI,358
@@ -15,22 +17,22 @@ nabu/app/fullfield_mixed.py,sha256=pg7NWapaI7zMJQhOIEbAz2i7j4RQddhtJPwSSdA9mX0,2
 nabu/app/generate_header.py,sha256=ApCAWv-Qgcohz6e5xybS94lHv9RF_QrWlNheVtmkfBE,8879
 nabu/app/histogram.py,sha256=PitW6ecFphMZnWXZ0ilc-YFkpeREjsBdNNDu1hpsl9Y,7905
 nabu/app/local_reconstruction.py,sha256=klVA7EIhdPkGNySLSU15AQICydRjqsjXVWNeAH-awyI,462
-nabu/app/nx_z_splitter.py,sha256=EPAoo1yRdu8xO-_1LM0sqPPl08tFZf3fNtr_qssQSHk,4963
-nabu/app/prepare_weights_double.py,sha256=ukSlL0aS7EvNR6NvBBLr2-HhptRdIkX-9hcrodDVVwE,2928
+nabu/app/nx_z_splitter.py,sha256=20lOGSq_vJKrAZA4Jxhrt-SvcZ73My4X_cYurZUFwPA,4963
+nabu/app/prepare_weights_double.py,sha256=skUqQidHv6kZM_uE8pLKsZw18RyTldT9nTvpbNK3xp8,3276
 nabu/app/reconstruct.py,sha256=zXtARd4Qj5z4joXUSrgjRjpcYScSY5IQ-9w5Z9AFNL0,3773
-nabu/app/reconstruct_helical.py,sha256=ds0hy5vH1UxoCDeJSGUdJhAIprt9IQBUBSCNDR2amUc,3860
+nabu/app/reconstruct_helical.py,sha256=JeTotf10UMfiJLR5YQUWVnG7bLpccIIwJuh76mbyCOM,3859
 nabu/app/rotate.py,sha256=aQzOYkxlElZZva0NVoIUTy_bmT5zl8GjFao1SVJ0GQQ,6422
 nabu/app/shrink_dataset.py,sha256=-3NgWf0qJ9cHfk39oqaJLf-1kR4K4fSAZ3FNubh_-pM,3494
 nabu/app/stitching.py,sha256=6dMXdqvStRwxxWPcUS6NDodNjD87HT_czVJY_oxYfWo,789
-nabu/app/utils.py,sha256=kfqRVT8KEZPAPPOULNCKDLAqde2y7GIUlH7cKcSB8wc,778
+nabu/app/utils.py,sha256=3fnhQsMkwq3YzgGpem2Ifh7A9KtB_MWYQt1eO1YDp34,984
 nabu/app/validator.py,sha256=kSd9-SbWKUeF2nqMcWs970lU8h2Wev-Rq0rh58NbGfQ,3360
 nabu/cuda/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/cuda/convolution.py,sha256=GnSJVAgAH22GDqSVuqulplfMHKTvtRaqrBCs7tHIgGc,15326
 nabu/cuda/kernel.py,sha256=fbqN_k_FhCB_PZ4USfpPrZxDZx_NG8KzxC332ZFQ8Q0,6552
 nabu/cuda/medfilt.py,sha256=Mb2EsY2UIPQXS3uPuUiY4D6VQJpP9MEbdAQHqK4xPMQ,5787
 nabu/cuda/padding.py,sha256=bwIdkBJILSUpMOSQ1iKc1idXkVE2_WC31scS_ZMZmw8,4784
-nabu/cuda/processing.py,sha256=CP3ElFB-bvT01-PLpUdDOEuj9norAQd4zCZhR63zz8Y,5499
-nabu/cuda/utils.py,sha256=1fapyx1hGMxg0aC-Qb-7prP7OuTsy68Pzze2jIZpSIs,8383
+nabu/cuda/processing.py,sha256=ktXNWdHw2b2Pl2NbHLror0_EJWdUazkSAi3zOrlyg5k,5500
+nabu/cuda/utils.py,sha256=Lo6ZyVUdxtc1KbCt7XLxvY-HKrilEyFLvV1cVO6qN1M,8384
 nabu/cuda/src/ElementOp.cu,sha256=na6J_-HyZoL96sn1kZmlHxl72oMaT_xo9ll-Er1jm3k,4770
 nabu/cuda/src/backproj.cu,sha256=xoYoQUReGKjShQeBsyK9y-8T5xwqQPvlNY0XtAMYZPE,5154
 nabu/cuda/src/backproj_polar.cu,sha256=sZbtw3KMfN69XyubJQSSLC87d5IPOyzbPBoRSNC1Cek,1851
@@ -50,12 +52,15 @@ nabu/cuda/src/padding.cu,sha256=SBfJV6aKPRdNaloGTL07BWDikxLMyrE_C4EeAedL-10,4424
 nabu/cuda/src/rotation.cu,sha256=inatw44lT0Qn4D2xguLi_YZsjzP96zfGGLiCc9vLhQw,657
 nabu/cuda/tests/__init__.py,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
 nabu/cuda/tests/test_medfilt.py,sha256=xJuO4ukv8Mv2D8xeVQ0172ubp17blmsRw1TjRaMg-fw,2721
-nabu/cuda/tests/test_padding.py,sha256=vbDke_0DK6SdKFkCuu7PExDv2nuxUarLREKVKIcS5Ys,7100
+nabu/cuda/tests/test_padding.py,sha256=DXNN632tJlfKzOCNRHdoQhYFxbxmPzIbB1tGmboD1d0,7101
+nabu/distributed/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+nabu/distributed/utils.py,sha256=bPGhnWBmLI4ME4vAe0_GcASFvLSi1fLDikh2jTZ0u4U,1578
+nabu/distributed/worker.py,sha256=KGC5uTCdT9zRzwLRAt4WLEg45TYq2GuRMpGhUiT6hB4,18739
 nabu/estimation/__init__.py,sha256=HWE3ivArjlJx4FjFh2Q73VmpIyzod80KTmXvFo1AP1s,379
 nabu/estimation/alignment.py,sha256=uMCLorAvzcBW0MmXf8RKrMcC2adOL50TobcIKSges84,20914
-nabu/estimation/cor.py,sha256=6L7dxJJ7qpqWgu1WaMYBV6aAG8q8-h13NLWvvheEwWk,36957
-nabu/estimation/cor_sino.py,sha256=1clrobuHboMBCZ3n5DzP-2co8mVb7PBosYXBhig-q6Q,6371
-nabu/estimation/distortion.py,sha256=-dEs0Ijmw6GqdRkDUedbjUpvCHhm6Lu_A-l5OrGiDck,4554
+nabu/estimation/cor.py,sha256=l2az-1jN5lYooO5VoJz1_XQwQ7ygaIeX0z7A8R26zpk,36802
+nabu/estimation/cor_sino.py,sha256=ZSDYwEvPkusf8OpfaZkqdta34nUOauzrlmUf9BSpYQ0,6494
+nabu/estimation/distortion.py,sha256=DEXizQpgHBXmrhbQ0kuEchicxmiDgmU2qrh8bCgSezg,4701
 nabu/estimation/focus.py,sha256=5Ot97-SfhdoaZaske3J_ZdPLIPGswovmGxmPM6ir2BU,15765
 nabu/estimation/tilt.py,sha256=pQZ-ieXbTvscIJIyP2nyMORxBMCm5XzDywmE98RoyRw,8596
 nabu/estimation/translation.py,sha256=g2Ob7gLSZVH8i1Xg4Ct0UgaMunDkLqUHXXadSIISVvQ,8301
@@ -67,23 +72,33 @@ nabu/estimation/tests/test_focus.py,sha256=deaVGbIFSzHDAReoeAy-1HLsnKWpJQsC2SL9W
 nabu/estimation/tests/test_tilt.py,sha256=PN4tnV3-XU2nNA608kQShaHugWn_-wbHzWCTnLIaCTk,1658
 nabu/estimation/tests/test_translation.py,sha256=RkOnCYgk9DZGKlIka1snqTv4wbIz_nG7-EHAxnBHsJU,2999
 nabu/io/__init__.py,sha256=Mx0HRIENk0dJbN3b9tzPZhiOnPMxBItgVNQn_QLLrlI,176
-nabu/io/cast_volume.py,sha256=1n6py13yRng2YRnl3bZFRPfIZNcxYKz93ZDGJWXVQuI,14761
-nabu/io/reader.py,sha256=NzwAwFplICjr13yNxPJ6EMlpRn8i9MBib915D9YDz3Q,21175
-nabu/io/reader_helical.py,sha256=n0ZDXYFcW3Ekc_j0FbFCYpS6EZcnGcs3Rsf375WsnPQ,4480
-nabu/io/tiffwriter_zmm.py,sha256=aaM8ByyH9KfIWqIbz8pusbAA8F01P8zdYtwlazI3K3I,3842
+nabu/io/cast_volume.py,sha256=J0UcvfPlR47wdn_uvzhWYivmhSyS2DOGZo98-nsy91U,15085
+nabu/io/detector_distortion.py,sha256=Or4icugi0fGRKWIG0I9hCuR1UZA5Cel25ZGY7cR2j4I,11744
+nabu/io/reader.py,sha256=nff5uva6HT254HodUNIvIkZECf-F1Kn__ApIqp3kRmM,22555
+nabu/io/reader_helical.py,sha256=_6vZBH-US_VT7oOGJUtYXqPwFws7xZKcmdOthpwvlIQ,4477
+nabu/io/tiffwriter_zmm.py,sha256=EiOW-LLGBYViGv_n6ytmV52DjGWSEhiQlPcPzL6OJnM,3841
 nabu/io/utils.py,sha256=9ntdqm-4P7Bgk4S5PreHTPPa9AHtzteuoJQrmetZd7w,8867
-nabu/io/writer.py,sha256=hsbLeuoB-0W-ST_aYXvhvNUH7UGSQg8vGc5aud46N5Y,25743
+nabu/io/writer.py,sha256=k30KI4jWJxgslH_VLGoQ0SZ-FrWXmnsf9MfmUmhLHQc,28503
+nabu/io/writer_BACKUP_193259.py,sha256=jFVWvI31OV4w5t5BwhnVlV3oTFKtZA6qHRxrk5RG1fk,19146
+nabu/io/writer_BACKUP_193381.py,sha256=jFVWvI31OV4w5t5BwhnVlV3oTFKtZA6qHRxrk5RG1fk,19146
+nabu/io/writer_BASE_193259.py,sha256=nBtxD8Enabofdt84arjKxSuarixW1QSjUz2JKmSA3j0,20029
+nabu/io/writer_BASE_193381.py,sha256=nBtxD8Enabofdt84arjKxSuarixW1QSjUz2JKmSA3j0,20029
+nabu/io/writer_LOCAL_193259.py,sha256=76mzvLjZ1twO-1nfqzhO-uGPL82jYEiB9AH6dmujgSs,19974
+nabu/io/writer_LOCAL_193381.py,sha256=76mzvLjZ1twO-1nfqzhO-uGPL82jYEiB9AH6dmujgSs,19974
+nabu/io/writer_REMOTE_193259.py,sha256=NLCnaynRufGrcKKqBp0ThkZuKq15eWA83GVoyn8Rmho,19167
+nabu/io/writer_REMOTE_193381.py,sha256=NLCnaynRufGrcKKqBp0ThkZuKq15eWA83GVoyn8Rmho,19167
 nabu/io/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-nabu/io/tests/test_cast_volume.py,sha256=nUivtLi0sNLxwiFrPYm2DIimxVRwGr2MXSWtoJz3KLg,8795
-nabu/io/tests/test_writers.py,sha256=1D59VHvI235aimpjctMjl2bxuyNZZY_BRsZxQuOBNsg,7188
+nabu/io/tests/test_cast_volume.py,sha256=Vb4KMEksRTIlDMsU7LnYmURCpnCNI95mVETqhmXO1KA,8883
+nabu/io/tests/test_detector_distortion.py,sha256=OlQVDlZV7A4VkqBrgRZrlonU0HZXb1R2_JmnXVI5nKs,6335
+nabu/io/tests/test_writers.py,sha256=PjHRI8euuRnejwE_LNMSdwqUq18V0V3VJwmRhi8xvyk,7188
 nabu/misc/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/misc/binning.py,sha256=x7mbKTfEKF8ZaZoPq2LJl9hfUsQ0qMNGMxaHE98PcNc,2920
 nabu/misc/filters.py,sha256=8aoO7-g94PJ8zDUSKD0pV4knozsmZIGTDiiGgO3Fzhg,604
-nabu/misc/fourier_filters.py,sha256=5ka3jw1DALbTgKSxOebb-3fdiB78OW_tSShPVJHYoTc,5636
+nabu/misc/fourier_filters.py,sha256=kGIOYTQtAMMvCgPz7PHTr38EiCKphM6X_16iBDbjwrQ,5691
 nabu/misc/histogram.py,sha256=Edl3PfJkj0lbj1gSBHfuylm1oJFenNwtGsJJ8Z3-UWw,11316
 nabu/misc/histogram_cuda.py,sha256=UnI4IwxlTVzl3tmjXsrMafEe_WsPwB5Ff_dboEy9AfY,3243
 nabu/misc/padding.py,sha256=NUTNDsafUnI1pgy-YtemKINGUUufCb7w2EV-UrznCsM,2713
-nabu/misc/rotation.py,sha256=Rnt_dMIgvIiQJlaM75_Dk-VZ1svQCzv-8xs59hc3MJ8,1857
+nabu/misc/rotation.py,sha256=ciRP6Zdf3tsoEe6Pr3ClfnWSBkSp9369iSHZohrSQg4,1856
 nabu/misc/rotation_cuda.py,sha256=oIlW-U3JTS5zg--5Xrg9iNij4VEZB97762BaWdkvRAs,2783
 nabu/misc/unsharp.py,sha256=XqoieKlX5sEHalxObi5JBOjauRUSbiHc6rqYT_buTa4,2682
 nabu/misc/unsharp_cuda.py,sha256=Vhx9Hkn-w3llvBR3_Xzc1IA3L2YLVDl8NZP2tIg58-c,2119
@@ -93,50 +108,55 @@ nabu/misc/tests/__init__.py,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
 nabu/misc/tests/test_binning.py,sha256=0TqnJrDhfqSeWF6ZJsMqFUQ0M2SJ1AHPpD1sWA0hBfE,1884
 nabu/misc/tests/test_histogram.py,sha256=tRruVCKeDWuvuOPfZgXCYkidoyq5AWVrQAxa50dF8Ow,2320
 nabu/misc/tests/test_interpolation.py,sha256=lXSsGWAQvj6Be3gyhHkb242Ec9DDLHlRF_mZklgbPaw,2392
-nabu/misc/tests/test_rotation.py,sha256=W-v_Pz42xUJIVddq1Q48Z12J3stssQRYQBdZNAFvfVI,2609
+nabu/misc/tests/test_rotation.py,sha256=hcA-VASUHLiENpFVFEzMH86KLyadfyL7_qGw7J8rjZE,2684
 nabu/misc/tests/test_unsharp.py,sha256=4ZSAB78dopifpUUomxoWT9AOdGs3hrDyMNiBJASj_oQ,2897
 nabu/opencl/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/opencl/utils.py,sha256=vg2QFEA1AMZ2Ky9-iHbk-hKwfDJXGTI0b7Y6h6qYI58,5168
 nabu/pipeline/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/pipeline/config.py,sha256=aA_DashVEHIaVMCmD2efrezSO6RHw6DO4ZYczKHZr-g,9301
-nabu/pipeline/config_validators.py,sha256=1kEMlAFohtGjtVaRUHIw_BcidMv-HCuN9WXyth_RHPc,13738
-nabu/pipeline/datadump.py,sha256=Okrhk5fSLeQZWgo2QBbBwitMcr68blyEBtoj7449zCY,6517
-nabu/pipeline/dataset_validator.py,sha256=4b_wi-G6WQTyLT3xKbBZqStKUEerTJa5C-0hGwvyXhY,9208
-nabu/pipeline/estimators.py,sha256=gIj92_YvyP6h0_YN0WrqskZ_7jzBBRq5CoW8m9BPDCo,31195
-nabu/pipeline/fallback_utils.py,sha256=Z5VCQhY6T94f5BY_Ge3Dr58zgu6PdgNcZI9BcY-DsVw,6086
-nabu/pipeline/params.py,sha256=xuaL82etQbw04HejqKopcOeIhhO8xoguz5u9G3jzo00,2648
-nabu/pipeline/processconfig.py,sha256=gyDVS0Et1VslTyn31Aqg_f12XSfbfFONlxkuBJ00-GA,8290
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 nabu/pipeline/fullfield/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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 nabu/pipeline/fullfield/grouped.py,sha256=kVeiyVefAH33InahIgUrEwvI4GE_ERlTVVEDxscesB0,21993
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 nabu/pipeline/fullfield/local_reconstruction.py,sha256=qDyzBvHJoGyXKq_XL5w99LDLT-KJf4lp6loOQ3Mlo2Q,36173
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 nabu/pipeline/helical/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/pipeline/helical/dataset_validator.py,sha256=PUrieVgQJ7FseA6DpAvMn5Q6nQIVbAoz32e9BA9s1SY,382
 nabu/pipeline/helical/fbp.py,sha256=tL-aVCXtMEyD0gDmx2YMjaBQw8EDogWdAHTMCN0HJyg,5580
 nabu/pipeline/helical/filtering.py,sha256=A5X1_Iwc5Z2X15UfSkejCoDUnmgzrCeWAlqLeKmIOjo,10353
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 nabu/pipeline/helical/helical_chunked_regridded_cuda.py,sha256=tl5qIzYmqWOauFmW46WQoHdU9t9mGDr45m-uOIrYzRk,4013
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 nabu/pipeline/helical/helical_utils.py,sha256=uFAQHDqENHqQWUpu1n99dnBCCKOlkgjDjvYORY6XFY0,1439
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 nabu/pipeline/helical/processconfig.py,sha256=NMo97gb_uv35EDvfMAi1Emhau8Vua-8eyAzrdk0Ub3E,2571
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 nabu/pipeline/helical/utils.py,sha256=51Qbh8db6-DX0iB9B9Kb07uwIG6_upAJg_8nhyzbB7o,1555
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 nabu/pipeline/helical/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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-nabu/pipeline/helical/tests/test_strategy.py,sha256=qTbFVEq0Hosi-FDrSGaiLSValz9N9bAW69WWCqHFgZA,2722
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+nabu/pipeline/helical/tests/test_strategy.py,sha256=rt8SsUHBMMcVFl48kRGcOyf1y4bYqaA2xDznQxE7wFs,2721
 nabu/pipeline/xrdct/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/preproc/__init__.py,sha256=dKxvZvWZXjKS3iPRaSXiUeM2dNGIOyTlirq5pdAWY0Y,284
 nabu/preproc/alignment.py,sha256=WDSPIlogwPfQDTqEyRH_ovaQ7vCpnR6XE_Ycif1wP0I,379
@@ -144,15 +164,15 @@ nabu/preproc/ccd.py,sha256=McFEI8ojQzCWXu7EpACyLdjG8mByw-dVx7fDAVoAMv4,5144
 nabu/preproc/ccd_cuda.py,sha256=yCZAhNpBHSA_8Sse1UYe6Vn-z0PTE_xwWIVOt__WePs,6062
 nabu/preproc/ctf.py,sha256=1gDbfXNGW9UA8ojEnEGMpsi1KsRoUASPi33PHvmbpD8,14891
 nabu/preproc/ctf_cuda.py,sha256=dYqfmkrkldj6HI8K0GUj7TGdOnIwHB8PRMBUdfDyR6w,4972
-nabu/preproc/distortion.py,sha256=T5-jB0RvR3PJbmqIhdqLsMAoVZo0quNlMZIWkCebmbc,3246
-nabu/preproc/double_flatfield.py,sha256=GuXTz0Bikg_789TKoF3ZjegvrDbcbr5u5MPB7_8nP_0,7255
-nabu/preproc/double_flatfield_cuda.py,sha256=F5L1J5DlfgamDjeIAKfitKzckOztldZSs96vc3jJEhc,6085
-nabu/preproc/double_flatfield_variable_region.py,sha256=fVDXHn4Ol1WIQH02TurTwUnLYCi0xFcMjc4BbKEtbIQ,1999
-nabu/preproc/flatfield.py,sha256=tZIJH_ddtMwkyCbqjgNdRivLIHutWbH2WBjx49c1sy8,18226
-nabu/preproc/flatfield_cuda.py,sha256=JO60rBNDB3CBZrjscuD7JLJ6y4NJoQzHLPPPoyEOwVI,5439
-nabu/preproc/flatfield_variable_region.py,sha256=laqwPKk5gkHXWkok6iscEETFz_jWz5p4VV72rCthOt4,2928
-nabu/preproc/phase.py,sha256=MED-OcmiWKXaz5hfK4E0wCFjzdszHJny8y9VQ2ptVEo,16573
-nabu/preproc/phase_cuda.py,sha256=ly7kf8B1Xd15Riq4KrrqUhaksGXnhbbhOvv6ytF42VU,4864
+nabu/preproc/distortion.py,sha256=XksQNrrSBfZS7mlvIdVEMZjw839ppQWP6AitTLcgfb0,3309
+nabu/preproc/double_flatfield.py,sha256=BwC8w5JWg06AZvsXxz355ByJfnwq87IwNfDlVWjw-Wc,7864
+nabu/preproc/double_flatfield_cuda.py,sha256=_ZfVNi17u0f3GEQKIyjLPMSiX-akzIr2ipT6qOtDJic,6132
+nabu/preproc/double_flatfield_variable_region.py,sha256=9NnI_MoY2mhjp1ifpfhTq5slkDhgoK-bMznkW6xRU_4,2279
+nabu/preproc/flatfield.py,sha256=KCZvIqxKB9eizI6nc0ez831ImHoDuQ9StSSvCNXIGZA,19202
+nabu/preproc/flatfield_cuda.py,sha256=qKhGujh76fl0YNgnhQbZeWx5x9fb-ytENGBNmS1dd0w,5438
+nabu/preproc/flatfield_variable_region.py,sha256=JnIn_hkt2YQdREIkEnMSF4B16JcrmtS6jLfUiBS97B4,3155
+nabu/preproc/phase.py,sha256=jiYlSXgYsjXFBPQ_gM-w4D5ecDfWUhBk5hpDAK4qJTo,16572
+nabu/preproc/phase_cuda.py,sha256=Xshi-OpRQ-UMj6f-Tx1br7hvugtPwSkaZ2kjuNkA0j0,4863
 nabu/preproc/rings.py,sha256=HxhAK96X2_CBc5YweNF2Re5RpjZgJFO8TPXBSjeW-O4,410
 nabu/preproc/rings_cuda.py,sha256=ZSZfptJSVRFHN4F4zKcy8fACCptpOQaI1TLhoJas4XM,261
 nabu/preproc/shift.py,sha256=UVa962Gj4b1CRAsez57glvBGXXFSDVnquB3Zd0JgquQ,3424
@@ -161,16 +181,16 @@ nabu/preproc/sinogram.py,sha256=dlNHOCzyqua4sgvDqDvHTaPIpj2gKYIJo1m1tKC2b18,208
 nabu/preproc/sinogram_cuda.py,sha256=E044Ae5Uz3uh5NWp8Sq92Hx8XRFHAjpbxe-1hs2VSWw,223
 nabu/preproc/tests/__init__.py,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
 nabu/preproc/tests/test_ccd_corr.py,sha256=KIpwaWYWT_6OPVXyVuLxXIIWreBkYF0rOnDMiegiLMU,2249
-nabu/preproc/tests/test_ctf.py,sha256=CQ6dP7tFmQ9HK32w1NyEcOecdu-1rtVgRWBN9380kro,9868
+nabu/preproc/tests/test_ctf.py,sha256=-TH5SWbSk82eSwhqzBdbZVv1lTKXyeUSBtkgpvzzyZs,9853
 nabu/preproc/tests/test_double_flatfield.py,sha256=CPGNAareBKukC-ek8dFgEdawEz0-RJWgihqbov6hvoI,2601
-nabu/preproc/tests/test_flatfield.py,sha256=B-6OuYQJAKFbtCEmbCHK_jb2ai9BC3AJomg8uytyETw,23499
+nabu/preproc/tests/test_flatfield.py,sha256=CnK8pFnCmBdwjDSEi9S0FwYIo_zXuHzlEIiIpWjYFf4,23498
 nabu/preproc/tests/test_paganin.py,sha256=e7ksHwTsg06aomLxQ-bMNxZjzAx_5pqpp9nvbwuz7iY,2182
 nabu/preproc/tests/test_vshift.py,sha256=roJKzC6DDBNdnwzWZ1cJzcc3Ly7a7iAXaUJhdO0Bw8I,2284
 nabu/reconstruction/__init__.py,sha256=EmKVvx_-FJvzJngG4ielIC7FhMCpI1Waaflg_lF44tk,163
 nabu/reconstruction/cone.py,sha256=agIkM14TcWk2Nv6y5797pMPBL8JZe2uznrjuWWQXTNI,11057
 nabu/reconstruction/fbp.py,sha256=eHD_E7j9rwSK9csmPSHeRk6NJWKTwYMjIeeBmzzpGfs,15436
-nabu/reconstruction/fbp_opencl.py,sha256=AbLPnttWKcATJv7hOzovUTDPfhTDIa5Q-Ju2vWe4pGc,3644
-nabu/reconstruction/filtering.py,sha256=MxnBRbM9s_c6-R7dCYvN2CMneo-Ov5rnPy3WV90WeVw,8005
+nabu/reconstruction/fbp_opencl.py,sha256=mJ4pVj_A8J64SsPbk3pIm5BGTZKlB7QvA6EU_8Fg5H8,3644
+nabu/reconstruction/filtering.py,sha256=crPFI5FbB7hnER2bFAzxKTRYlPJ6jno0u1bc4xZj8Ho,8004
 nabu/reconstruction/reconstructor.py,sha256=wSva2EK-NTJi8N_ubzJWIZ4sv2ksfrA9YcA2ioEtISo,7299
 nabu/reconstruction/reconstructor_cuda.py,sha256=wqWKU4D25pY2UAl5jgLBl0ROIPVIOLbf9a077NkGGdI,1759
 nabu/reconstruction/rings.py,sha256=_9KgnX1VVfeJVKQkpDIuLFnxE5pfDWrss1Z9uwUZSrI,2405
@@ -180,13 +200,13 @@ nabu/reconstruction/sinogram_cuda.py,sha256=16b-2QyboVu310SyJ3iqQ57XIL1klxKR0Iwq
 nabu/reconstruction/tests/__init__.py,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
 nabu/reconstruction/tests/test_cone.py,sha256=R9Q-o9jz5ZBRwpGRRDwWr4owrrI3bJow5f_x_toq_lw,11813
 nabu/reconstruction/tests/test_deringer.py,sha256=wNeNexCLWp4ZIayE5IEEAx2rMALEB8f2fbPa34pLKbQ,3221
-nabu/reconstruction/tests/test_fbp.py,sha256=cIp0O-RVMhZiO3d9_ZbAILiLrlcPBiS-XUGWVRopF5M,6470
+nabu/reconstruction/tests/test_fbp.py,sha256=cf-UWDAgJDcsz9MWCbLyGuUScOeSxDVIdI3AIiZRvWI,6471
 nabu/reconstruction/tests/test_halftomo.py,sha256=yL-QZil5WU_sKrObOsYXBhC4qKd4JjFWLs68UJOLpNw,6995
 nabu/reconstruction/tests/test_reconstructor.py,sha256=dEGqlQHfFwX_V2Ybnq5AAM5tprXn_2OuCSrC6cW4S0A,3221
 nabu/reconstruction/tests/test_sino_normalization.py,sha256=fGv5Dlidxgm8ZC70Nk6oqVgpY2jzOW9NJaGlo44IJOo,3692
 nabu/resources/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/resources/cor.py,sha256=-mcrTbj3G7o4PP5E_gIRo2j6_-ADmMkkOc_0CyQv84c,170
-nabu/resources/dataset_analyzer.py,sha256=Bg5EEEhdO-ulkds5ZowSx_gqSV6T0FLgx2ljkBs3ZWY,12761
+nabu/resources/dataset_analyzer.py,sha256=Gj-uTJ3a5jyh9P2p0Ug97U7AfM41PObQQxgzYv1Gykc,12760
 nabu/resources/gpu.py,sha256=rwCFHJ8DGvVP1bnd1bFJKs6dO55ZuONcfxXEEpuIez0,5701
 nabu/resources/logger.py,sha256=-lOzhN_sU4R3BIfC69aMj2O8S_ocsvXsmwkhWlcxVEc,3758
 nabu/resources/machinesdb.py,sha256=n66OfRkD91QQfs3aOFBnqLyGwcpt7XmfUO6Xoo-8Gz0,3217
@@ -194,15 +214,16 @@ nabu/resources/nxflatfield.py,sha256=LrweDWWHT_X8C4WfDrB8u69NC3BPVy9cXl0oqqvlONg
 nabu/resources/utils.py,sha256=f4ToYFtHCwM1bogREEQOJb2Pz_jNWHVkPBUnns8cfLQ,5485
 nabu/resources/cli/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/resources/templates/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-nabu/resources/templates/id16_ctf.conf,sha256=i3eG6vQhjDoTzDtRm0HgQIpn3JTZWQfL9yUELD8CVUw,792
+nabu/resources/templates/bm05_pag.conf,sha256=3-Zny2_QlQuZKge53N1vFLZ8yzq-y2cmpAAkByUdHX8,394
+nabu/resources/templates/id16_ctf.conf,sha256=PJt_hvBlAweZSo6INnsmozHfBJvJ64b28x1mFfAOD6s,842
 nabu/resources/templates/id16_holo.conf,sha256=sDd_rEJGZjOGVAsGub5sT2arfXDnc_sxyDBAcfKHNpw,773
 nabu/resources/templates/id19_pag.conf,sha256=u4fFPEBprzOW9_5_ChkIgowQcYpLhjmA8Gwm5XgC4Jc,384
 nabu/resources/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-nabu/resources/tests/test_nxflatfield.py,sha256=NYUHbhTqxq5JCnLfum2ogV0U8n7z13441j7AiGTY_xk,4299
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+nabu/resources/tests/test_units.py,sha256=F2jFTck-1UwYET1MwTtX6ntzYUosfwOJkugSencGgz8,2155
 nabu/stitching/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/stitching/config.py,sha256=bgf7EHS7doLDUibOOHH9PcuWp4n4McrQI_8I3edmmzc,18413
-nabu/stitching/frame_composition.py,sha256=05i4pqG6JpTQdzl-6noymrUahapnUaJg-vnFAQY8bLY,7315
+nabu/stitching/frame_composition.py,sha256=eDAOhHkhehLJUTdEpBqmRBGiRF8DzINsIpviCoEYJu8,7385
 nabu/stitching/overlap.py,sha256=zCMhOTpslFpx0xNfXhdQAhmRrWPd37n6o0pLQfD2eKM,6178
 nabu/stitching/utils.py,sha256=p1Sb3z63GhhjifYjeuKMf6DDJPhGE3YdKnMKlhucM2I,7909
 nabu/stitching/z_stitching.py,sha256=VcIiNVADgvz8h-VOOWbamSYNp2b35i2eQ5WPAUTrgeg,43070
@@ -210,10 +231,10 @@ nabu/thirdparty/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 nabu/thirdparty/pore3d_deringer_munch.py,sha256=o4bisnFc-wMjuohWBT8wgWmfNehPQGtCl6G2NebJlbg,4500
 nabu/thirdparty/tomopy_phase.py,sha256=hK4oPpkogLOhv23XzzEXQY2u3r8fJvASY_bINVs6ERE,8634
 nabu/thirdparty/tomwer_load_flats_darks.py,sha256=ZNoVAinUb_wGYbfvs_4BVnWsjsQmNxSvCh1bWhR2WWg,5611
-nabu-2022.3.0a1.dist-info/LICENSE,sha256=5Brn2Fb7bFq1aWEGt9Nft51PqVDT8xQmVtQ1kin9nTo,1061
-nabu-2022.3.0a1.dist-info/METADATA,sha256=LmHl6qMemaU4oD0OnLGVjFLgZWHzuyphUr2eXAIMW8Q,1014
-nabu-2022.3.0a1.dist-info/WHEEL,sha256=ewwEueio1C2XeHTvT17n8dZUJgOvyCWCt0WVNLClP9o,92
-nabu-2022.3.0a1.dist-info/entry_points.txt,sha256=IefsuLr4YOGwzfqrrLUTCrrakLyYjBK7xXZun5hhD9Y,843
-nabu-2022.3.0a1.dist-info/top_level.txt,sha256=4gZBSqkJpZfhO0TPuvtIFnODQGk4j0XQlOsHM9idIv8,5
-nabu-2022.3.0a1.dist-info/zip-safe,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
-nabu-2022.3.0a1.dist-info/RECORD,,
+nabu-2023.1.0a2.dist-info/LICENSE,sha256=5Brn2Fb7bFq1aWEGt9Nft51PqVDT8xQmVtQ1kin9nTo,1061
+nabu-2023.1.0a2.dist-info/METADATA,sha256=SVsaCDC8I6pBboLOjgGFVuZacyIwnefob4piuqVmfvc,951
+nabu-2023.1.0a2.dist-info/WHEEL,sha256=2wepM1nk4DS4eFpYrW1TTqPcoGNfHhhO_i5m4cOimbo,92
+nabu-2023.1.0a2.dist-info/entry_points.txt,sha256=BEl17rpRKrE3v964P_CCe_Xnd-JgBVBWEp1xySNwm5A,965
+nabu-2023.1.0a2.dist-info/top_level.txt,sha256=4gZBSqkJpZfhO0TPuvtIFnODQGk4j0XQlOsHM9idIv8,5
+nabu-2023.1.0a2.dist-info/zip-safe,sha256=AbpHGcgLb-kRsJGnwFEktk7uzpZOCcBY74-YBdrKVGs,1
+nabu-2023.1.0a2.dist-info/RECORD,,

{nabu-2022.3.0a1.dist-info → nabu-2023.1.0a2.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.37.0)
+Generator: bdist_wheel (0.38.4)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

{nabu-2022.3.0a1.dist-info → nabu-2023.1.0a2.dist-info}/entry_points.txt

@@ -2,12 +2,14 @@
 nabu = nabu.app.reconstruct:main
 nabu-cast = nabu.app.cast_volume:main
 nabu-compare-volumes = nabu.app.compare_volumes:compare_volumes_cli
+nabu-composite-cor = nabu.app.composite_cor:main
 nabu-config = nabu.app.bootstrap:bootstrap
 nabu-double-flatfield = nabu.app.double_flatfield:dff_cli
 nabu-generate-info = nabu.app.generate_header:generate_merged_info_file
 nabu-helical = nabu.app.reconstruct_helical:main_helical
 nabu-helical-prepare-weights-double = nabu.app.prepare_weights_double:main
 nabu-histogram = nabu.app.histogram:histogram_cli
+nabu-poly2map = nabu.app.create_distortion_map_from_poly:horizontal_match
 nabu-rotate = nabu.app.rotate:rotate_cli
 nabu-shrink-dataset = nabu.app.shrink_dataset:shrink_cli
 nabu-stitching = nabu.app.stitching:main
@@ -15,4 +17,3 @@ nabu-stitching-config = nabu.app.bootstrap_stitching:bootstrap_stitching
 nabu-test = nabu.tests:nabu_test
 nabu-validator = nabu.app.validator:main
 nabu-zsplit = nabu.app.nx_z_splitter:zsplit
-