mystmd 1.3.19__py3-none-any.whl → 1.3.21__py3-none-any.whl

mystmd_py/myst.cjs

@@ -1344,13 +1344,13 @@ var require_object_create = __commonJS({
       return temp;
     };
     var NullProtoObjectViaIFrame = function() {
-      var iframe3 = documentCreateElement("iframe");
+      var iframe4 = documentCreateElement("iframe");
       var JS = "java" + SCRIPT + ":";
       var iframeDocument;
-      iframe3.style.display = "none";
-      html7.appendChild(iframe3);
-      iframe3.src = String(JS);
-      iframeDocument = iframe3.contentWindow.document;
+      iframe4.style.display = "none";
+      html7.appendChild(iframe4);
+      iframe4.src = String(JS);
+      iframeDocument = iframe4.contentWindow.document;
       iframeDocument.open();
       iframeDocument.write(scriptTag("document.F=Object"));
       iframeDocument.close();
@@ -45547,13 +45547,13 @@ var require_css_syntax_error = __commonJS({
         let css = this.source;
         if (color2 == null)
           color2 = pico.isColorSupported;
-        let aside = (text7) => text7;
+        let aside2 = (text7) => text7;
         let mark2 = (text7) => text7;
         let highlight = (text7) => text7;
         if (color2) {
           let { bold, gray, red } = pico.createColors(true);
           mark2 = (text7) => bold(red(text7));
-          aside = (text7) => gray(text7);
+          aside2 = (text7) => gray(text7);
           if (terminalHighlight) {
             highlight = (text7) => terminalHighlight(text7);
           }
@@ -45574,13 +45574,13 @@ var require_css_syntax_error = __commonJS({
                 this.endColumn + padding2
               );
               let subLine = line2.slice(subLineStart, subLineEnd);
-              let spacing3 = aside(gutter.replace(/\d/g, " ")) + line2.slice(0, Math.min(this.column - 1, padding2 - 1)).replace(/[^\t]/g, " ");
-              return mark2(">") + aside(gutter) + highlight(subLine) + "\n " + spacing3 + mark2("^");
+              let spacing3 = aside2(gutter.replace(/\d/g, " ")) + line2.slice(0, Math.min(this.column - 1, padding2 - 1)).replace(/[^\t]/g, " ");
+              return mark2(">") + aside2(gutter) + highlight(subLine) + "\n " + spacing3 + mark2("^");
             }
-            let spacing2 = aside(gutter.replace(/\d/g, " ")) + line2.slice(0, this.column - 1).replace(/[^\t]/g, " ");
-            return mark2(">") + aside(gutter) + highlight(line2) + "\n " + spacing2 + mark2("^");
+            let spacing2 = aside2(gutter.replace(/\d/g, " ")) + line2.slice(0, this.column - 1).replace(/[^\t]/g, " ");
+            return mark2(">") + aside2(gutter) + highlight(line2) + "\n " + spacing2 + mark2("^");
           }
-          return " " + aside(gutter) + highlight(line2);
+          return " " + aside2(gutter) + highlight(line2);
         }).join("\n");
       }
       toString() {
@@ -91757,7 +91757,7 @@ var require_lib15 = __commonJS({
       const prefix2 = !pathPart && rRel.test(cmd) ? cmd.slice(0, 2) : "";
       return prefix2 + join20(pathPart, cmd);
     };
-    var which7 = async (cmd, opt = {}) => {
+    var which8 = async (cmd, opt = {}) => {
       const { pathEnv, pathExt, pathExtExe } = getPathInfo(cmd, opt);
       const found2 = [];
       for (const envPart of pathEnv) {
@@ -91805,8 +91805,8 @@ var require_lib15 = __commonJS({
       }
       throw getNotFoundError(cmd);
     };
-    module2.exports = which7;
-    which7.sync = whichSync;
+    module2.exports = which8;
+    which8.sync = whichSync;
   }
 });
 
@@ -99095,7 +99095,7 @@ var require_p_limit = __commonJS({
   "../myst-cli/node_modules/p-limit/index.js"(exports2, module2) {
     "use strict";
     var Queue = require_yocto_queue();
-    var pLimit3 = (concurrency) => {
+    var pLimit4 = (concurrency) => {
       if (!((Number.isInteger(concurrency) || concurrency === Infinity) && concurrency > 0)) {
         throw new TypeError("Expected `concurrency` to be a number from 1 and up");
       }
@@ -99144,7 +99144,7 @@ var require_p_limit = __commonJS({
       });
       return generator;
     };
-    module2.exports = pLimit3;
+    module2.exports = pLimit4;
   }
 });
 
@@ -99351,7 +99351,7 @@ var require_lib16 = __commonJS({
       const prefix2 = !pathPart && rRel.test(cmd) ? cmd.slice(0, 2) : "";
       return prefix2 + join20(pathPart, cmd);
     };
-    var which7 = async (cmd, opt = {}) => {
+    var which8 = async (cmd, opt = {}) => {
       const { pathEnv, pathExt, pathExtExe } = getPathInfo(cmd, opt);
       const found2 = [];
       for (const envPart of pathEnv) {
@@ -99399,8 +99399,8 @@ var require_lib16 = __commonJS({
       }
       throw getNotFoundError(cmd);
     };
-    module2.exports = which7;
-    which7.sync = whichSync;
+    module2.exports = which8;
+    which8.sync = whichSync;
   }
 });
 
@@ -165994,7 +165994,7 @@ var require_bl = __commonJS({
 var require_ora = __commonJS({
   "../../node_modules/ora/index.js"(exports2, module2) {
     "use strict";
-    var readline3 = require("readline");
+    var readline2 = require("readline");
     var chalk7 = require_source();
     var cliCursor3 = require_cli_cursor();
     var cliSpinners = require_cli_spinners();
@@ -166047,7 +166047,7 @@ var require_ora = __commonJS({
         if (process.platform === "win32") {
           return;
         }
-        this.rl = readline3.createInterface({
+        this.rl = readline2.createInterface({
           input: process.stdin,
           output: this.mutedStream
         });
@@ -193891,7 +193891,7 @@ var {
 } = import_index.default;
 
 // src/version.ts
-var version = "1.3.19";
+var version = "1.3.21";
 var version_default = version;
 
 // ../myst-cli/dist/build/build.js
@@ -194751,7 +194751,7 @@ function validateAndStashObject(input3, stash, kind, validateFn, opts) {
 }
 
 // ../../node_modules/doi-utils/dist/validatePart.js
-var DOI_VALIDATION_PATTERN = /^10.\d{4,9}\/[-._;()/:A-Z0-9]+$/i;
+var DOI_VALIDATION_PATTERN = /^10\.\d{4,9}\/[-._;()/:A-Z0-9]+$/i;
 function validatePart(possibleDOI) {
   if (!possibleDOI)
     return false;
@@ -195576,6 +195576,7 @@ var PROJECT_AND_PAGE_FRONTMATTER_KEYS = [
   "downloads",
   "settings",
   // We maybe want to move this into site frontmatter in the future
+  "edit_url",
   ...KNOWN_EXTERNAL_IDENTIFIERS,
   // Do not add any project specific keys here!
   ...SITE_FRONTMATTER_KEYS
@@ -195599,8 +195600,9 @@ var PAGE_FRONTMATTER_KEYS = [
   "kernelspec",
   "jupytext",
   "tags",
-  "content_includes_title",
-  "site"
+  "site",
+  "enumerator",
+  "content_includes_title"
 ];
 
 // ../myst-frontmatter/dist/exports/types.js
@@ -196304,6 +196306,9 @@ var licenses = {
   "any-OSI": {
     name: "Any OSI License"
   },
+  "any-OSI-perl-modules": {
+    name: "Any OSI License - Perl Modules"
+  },
   "Apache-1.0": {
     name: "Apache License 1.0",
     free: true
@@ -196409,6 +196414,9 @@ var licenses = {
   "Boehm-GC": {
     name: "Boehm-Demers-Weiser GC License"
   },
+  "Boehm-GC-without-fee": {
+    name: "Boehm-Demers-Weiser GC License (without fee)"
+  },
   Borceux: {
     name: "Borceux license"
   },
@@ -196771,6 +196779,14 @@ var licenses = {
     name: "Creative Commons Public Domain Dedication and Certification",
     CC: true
   },
+  "CC-PDM-1.0": {
+    name: "Creative    Commons Public Domain Mark 1.0 Universal",
+    CC: true
+  },
+  "CC-SA-1.0": {
+    name: "Creative Commons Share Alike 1.0 Generic",
+    CC: true
+  },
   "CC0-1.0": {
     name: "Creative Commons Zero v1.0 Universal",
     free: true,
@@ -196943,6 +196959,9 @@ var licenses = {
   "DocBook-Schema": {
     name: "DocBook Schema License"
   },
+  "DocBook-Stylesheet": {
+    name: "DocBook Stylesheet License"
+  },
   "DocBook-XML": {
     name: "DocBook XML License"
   },
@@ -197087,6 +197106,9 @@ var licenses = {
   GD: {
     name: "GD License"
   },
+  "generic-xts": {
+    name: "Generic XTS License"
+  },
   "GFDL-1.1-invariants-only": {
     name: "GNU Free Documentation License v1.1 only - invariants"
   },
@@ -197333,6 +197355,9 @@ var licenses = {
   "Inner-Net-2.0": {
     name: "Inner Net License v2.0"
   },
+  InnoSetup: {
+    name: "Inno Setup License"
+  },
   Intel: {
     name: "Intel Open Source License",
     osi: true,
@@ -197547,6 +197572,9 @@ var licenses = {
   Minpack: {
     name: "Minpack License"
   },
+  MIPS: {
+    name: "MIPS License"
+  },
   MirOS: {
     name: "The MirOS Licence",
     osi: true
@@ -197563,6 +197591,9 @@ var licenses = {
   "MIT-advertising": {
     name: "Enlightenment License (e16)"
   },
+  "MIT-Click": {
+    name: "MIT Click License"
+  },
   "MIT-CMU": {
     name: "CMU License"
   },
@@ -198064,6 +198095,9 @@ var licenses = {
   "Sendmail-8.23": {
     name: "Sendmail License 8.23"
   },
+  "Sendmail-Open-Source-1.1": {
+    name: "Sendmail Open Source License v1.1"
+  },
   "SGI-B-1.0": {
     name: "SGI Free Software License B v1.0"
   },
@@ -198106,6 +198140,9 @@ var licenses = {
     osi: true,
     free: true
   },
+  "SMAIL-GPL": {
+    name: "SMAIL General Public License"
+  },
   SMLNJ: {
     name: "Standard ML of New Jersey License",
     free: true
@@ -198190,6 +198227,9 @@ var licenses = {
   "TGPPL-1.0": {
     name: "Transitive Grace Period Public Licence 1.0"
   },
+  ThirdEye: {
+    name: "ThirdEye License"
+  },
   threeparttable: {
     name: "threeparttable License"
   },
@@ -198208,6 +198248,9 @@ var licenses = {
   "TPL-1.0": {
     name: "THOR Public License 1.0"
   },
+  TrustedQSL: {
+    name: "TrustedQSL License"
+  },
   TTWL: {
     name: "Text-Tabs+Wrap License"
   },
@@ -198306,6 +198349,9 @@ var licenses = {
     name: "Do What The F*ck You Want To Public License",
     free: true
   },
+  wwl: {
+    name: "WWL License"
+  },
   X11: {
     name: "X11 License",
     free: true
@@ -198415,7 +198461,7 @@ function correctLicense(license) {
 function createURL(id, cc, osi) {
   var _a6, _b;
   if (cc) {
-    const match3 = /^([CBYSAND0ZEROPD-]+)(?:(?:-)([0-9].[0-9]))?(?:(?:-)([A-Z]{2,3}))?$/.exec(id);
+    const match3 = /^([CBYSAND0ZEROPDM-]+)(?:(?:-)([0-9].[0-9]))?(?:(?:-)([A-Z]{2,3}))?$/.exec(id);
     if (!match3) {
       throw new Error("Creative Commons license not found");
     }
@@ -198450,6 +198496,9 @@ function createURL(id, cc, osi) {
       case "CC-PDDC":
         link4 = "/publicdomain/";
         break;
+      case "CC-PDM":
+        link4 = "/publicdomain/mark/1.0/";
+        break;
       default:
         break;
     }
@@ -198663,7 +198712,7 @@ function simplifyLicenses(licenses2) {
 }
 
 // ../myst-frontmatter/dist/numbering/validators.js
-var NUMBERING_OPTIONS = ["enumerator", "all", "headings"];
+var NUMBERING_OPTIONS = ["enumerator", "all", "headings", "title"];
 var HEADING_KEYS = ["heading_1", "heading_2", "heading_3", "heading_4", "heading_5", "heading_6"];
 var NUMBERING_KEYS = [
   "figure",
@@ -198674,7 +198723,8 @@ var NUMBERING_KEYS = [
   "code",
   ...HEADING_KEYS
 ];
-var NUMBERING_ITEM_KEYS = ["enabled", "start", "template"];
+var NUMBERING_ITEM_KEYS = ["enabled", "start", "enumerator", "template", "continue"];
+var CONTINUE_STRINGS = ["continue", "next"];
 var NUMBERING_ALIAS = {
   sections: "headings",
   h1: "heading_1",
@@ -198688,7 +198738,13 @@ var NUMBERING_ALIAS = {
   heading3: "heading_3",
   heading4: "heading_4",
   heading5: "heading_5",
-  heading6: "heading_6"
+  heading6: "heading_6",
+  figures: "figure",
+  subfigures: "subfigure",
+  equations: "equation",
+  subequations: "subequation",
+  tables: "table",
+  titles: "title"
 };
 function isBoolean(input3) {
   if (typeof input3 === "string") {
@@ -198697,11 +198753,13 @@ function isBoolean(input3) {
   return typeof input3 === "boolean";
 }
 function validateNumberingItem(input3, opts) {
-  var _a6, _b;
+  var _a6, _b, _c, _d2, _e;
   if (isBoolean(input3)) {
     input3 = { enabled: input3 };
   } else if (typeof input3 === "number") {
     input3 = { start: input3 };
+  } else if (CONTINUE_STRINGS.includes(input3)) {
+    input3 = { continue: true };
   } else if (typeof input3 === "string") {
     input3 = { template: input3 };
   }
@@ -198715,20 +198773,78 @@ function validateNumberingItem(input3, opts) {
       output2.enabled = enabled;
   }
   if (defined(value.start)) {
-    const start = validateNumber(value.start, {
-      ...incrementOptions("start", opts),
-      integer: true,
-      min: 1
-    });
-    if (start) {
-      output2.start = start;
+    if (CONTINUE_STRINGS.includes(value.start) && !defined(value.continue)) {
+      output2.continue = true;
       output2.enabled = (_a6 = output2.enabled) !== null && _a6 !== void 0 ? _a6 : true;
+    } else {
+      const start = validateNumber(value.start, {
+        ...incrementOptions("start", opts),
+        integer: true,
+        min: 1
+      });
+      if (start) {
+        output2.start = start;
+        output2.enabled = (_b = output2.enabled) !== null && _b !== void 0 ? _b : true;
+      }
     }
   }
   if (defined(value.template)) {
     const template = validateString(value.template, incrementOptions("template", opts));
     if (defined(template)) {
       output2.template = template;
+      output2.enabled = (_c = output2.enabled) !== null && _c !== void 0 ? _c : true;
+    }
+  }
+  if (defined(value.enumerator)) {
+    const enumerator = validateString(value.enumerator, incrementOptions("enumerator", opts));
+    if (defined(enumerator)) {
+      output2.enumerator = enumerator;
+      output2.enabled = (_d2 = output2.enabled) !== null && _d2 !== void 0 ? _d2 : true;
+    }
+  }
+  if (defined(value.continue)) {
+    const cont = validateBoolean(value.continue, incrementOptions("continue", opts));
+    if (defined(cont)) {
+      output2.continue = cont;
+      output2.enabled = (_e = output2.enabled) !== null && _e !== void 0 ? _e : true;
+    }
+  }
+  if (Object.keys(output2).length === 0)
+    return void 0;
+  return output2;
+}
+function validateTitleItem(input3, opts) {
+  var _a6, _b;
+  if (isBoolean(input3)) {
+    input3 = { enabled: input3 };
+  } else if (typeof input3 === "number") {
+    input3 = { offset: input3 };
+  }
+  const value = validateObjectKeys(input3, { optional: ["enabled", "offset", "enumerator"] }, opts);
+  if (value === void 0)
+    return void 0;
+  const output2 = {};
+  if (defined(value.enabled)) {
+    const enabled = validateBoolean(value.enabled, incrementOptions("enabled", opts));
+    if (defined(enabled))
+      output2.enabled = enabled;
+  }
+  if (defined(value.offset)) {
+    const offset = validateNumber(value.offset, {
+      integer: true,
+      min: 0,
+      max: 5,
+      ...incrementOptions("offset", opts)
+    });
+    if (defined(offset)) {
+      output2.offset = offset;
+      output2.enabled = (_a6 = output2.enabled) !== null && _a6 !== void 0 ? _a6 : true;
+    }
+  }
+  if (defined(value.enumerator)) {
+    const enumerator = validateString(value.enumerator, incrementOptions("enumerator", opts));
+    if (defined(enumerator)) {
+      output2.enumerator = enumerator;
       output2.enabled = (_b = output2.enabled) !== null && _b !== void 0 ? _b : true;
     }
   }
@@ -198737,7 +198853,7 @@ function validateNumberingItem(input3, opts) {
   return output2;
 }
 function validateNumbering(input3, opts) {
-  var _a6, _b, _c, _d2;
+  var _a6, _b, _c, _d2, _e;
   if (isBoolean(input3)) {
     input3 = { all: input3 };
   }
@@ -198748,6 +198864,9 @@ function validateNumbering(input3, opts) {
   let headings;
   if (defined(value.enumerator)) {
     const enumeratorOpts = incrementOptions("enumerator", opts);
+    if (typeof value.enumerator === "string") {
+      value.enumerator = { enumerator: value.enumerator };
+    }
     output2.enumerator = validateNumberingItem(value.enumerator, enumeratorOpts);
     if (((_a6 = output2.enumerator) === null || _a6 === void 0 ? void 0 : _a6.enabled) != null) {
       if (output2.enumerator.enabled !== true) {
@@ -198759,18 +198878,31 @@ function validateNumbering(input3, opts) {
       validationWarning("value for 'start' is ignored", enumeratorOpts);
       delete output2.enumerator.start;
     }
+    if (((_c = output2.enumerator) === null || _c === void 0 ? void 0 : _c.continue) != null) {
+      validationWarning("value for 'continue' is ignored", enumeratorOpts);
+      delete output2.enumerator.continue;
+    }
+    if (!output2.enumerator || Object.keys(output2.enumerator).length === 0) {
+      delete output2.enumerator;
+    }
   }
   if (defined(value.all)) {
     const allOpts = incrementOptions("all", opts);
     output2.all = validateNumberingItem(value.all, allOpts);
-    if (((_c = output2.all) === null || _c === void 0 ? void 0 : _c.template) != null) {
+    if (((_d2 = output2.all) === null || _d2 === void 0 ? void 0 : _d2.template) != null) {
       validationWarning("value for 'template' is ignored", allOpts);
       delete output2.all.template;
     }
-    if (((_d2 = output2.all) === null || _d2 === void 0 ? void 0 : _d2.start) != null) {
+    if (((_e = output2.all) === null || _e === void 0 ? void 0 : _e.start) != null) {
       validationWarning("value for 'start' is ignored", allOpts);
       delete output2.all.start;
     }
+    if (!output2.all || Object.keys(output2.all).length === 0) {
+      delete output2.all;
+    }
+  }
+  if (defined(value.title)) {
+    output2.title = validateTitleItem(value.title, incrementOptions("title", opts));
   }
   if (defined(value.headings)) {
     headings = validateNumberingItem(value.headings, incrementOptions("headings", opts));
@@ -198799,11 +198931,15 @@ function validateNumbering(input3, opts) {
 function fillNumbering(base5, filler) {
   const output2 = { ...filler, ...base5 };
   Object.entries(filler !== null && filler !== void 0 ? filler : {}).filter(([key2]) => !NUMBERING_OPTIONS.includes(key2)).forEach(([key2, val]) => {
-    var _a6, _b, _c;
+    var _a6, _b, _c, _d2, _e;
     output2[key2] = fillMissingKeys(
       (_a6 = base5 === null || base5 === void 0 ? void 0 : base5[key2]) !== null && _a6 !== void 0 ? _a6 : {},
       // Enabling/disabling all in base overrides filler
-      { ...val, enabled: (_c = (_b = base5 === null || base5 === void 0 ? void 0 : base5.all) === null || _b === void 0 ? void 0 : _b.enabled) !== null && _c !== void 0 ? _c : val.enabled },
+      {
+        ...val,
+        enabled: (_c = (_b = base5 === null || base5 === void 0 ? void 0 : base5.all) === null || _b === void 0 ? void 0 : _b.enabled) !== null && _c !== void 0 ? _c : val.enabled,
+        continue: (_e = (_d2 = base5 === null || base5 === void 0 ? void 0 : base5.all) === null || _d2 === void 0 ? void 0 : _d2.continue) !== null && _e !== void 0 ? _e : val.continue
+      },
       NUMBERING_ITEM_KEYS
     );
   });
@@ -199474,6 +199610,11 @@ function validateProjectAndPageFrontmatterKeys(value, opts) {
     if (settings)
       output2.settings = settings;
   }
+  if (value.edit_url === null) {
+    output2.edit_url = null;
+  } else if (defined(value.edit_url)) {
+    output2.edit_url = validateUrl(value.edit_url, incrementOptions("edit_url", opts));
+  }
   return output2;
 }
 function validateProjectFrontmatterKeys(value, opts) {
@@ -199550,6 +199691,9 @@ function validatePageFrontmatterKeys(value, opts) {
   if (defined(value.jupytext)) {
     output2.jupytext = validateJupytext(value.jupytext, incrementOptions("jupytext", opts));
   }
+  if (defined(value.enumerator)) {
+    output2.enumerator = validateString(value.enumerator, incrementOptions("enumerator", opts));
+  }
   if (defined(value.content_includes_title)) {
     output2.content_includes_title = validateBoolean(value.content_includes_title, incrementOptions("content_includes_title", opts));
   }
@@ -203271,11 +203415,16 @@ function createHtmlId(identifier) {
 }
 function transferTargetAttrs(sourceNode, destNode, vfile2) {
   if (sourceNode.label) {
-    if (destNode.label && vfile2) {
+    if (destNode.label && vfile2 && destNode.label !== sourceNode.label) {
       fileWarn(vfile2, `label "${destNode.label}" replaced with "${sourceNode.label}"`, {
         node: destNode
       });
     }
+    if (destNode.label && vfile2 && destNode.label === sourceNode.label) {
+      fileWarn(vfile2, `duplicate label "${destNode.label}" replacement`, {
+        node: destNode
+      });
+    }
     destNode.label = sourceNode.label;
     delete sourceNode.label;
   }
@@ -204503,7 +204652,14 @@ var visit = (
 
 // ../myst-common/dist/selectNodes.js
 function isTargetIdentifierNode(node3) {
-  const nonTargetTypes = ["crossReference", "cite", "footnoteDefinition", "footnoteReference"];
+  const nonTargetTypes = [
+    "crossReference",
+    "cite",
+    "footnoteDefinition",
+    "footnoteReference",
+    "captionNumber",
+    "link"
+  ];
   return !nonTargetTypes.includes(node3.type);
 }
 var hiddenNodes = /* @__PURE__ */ new Set(["comment", "mystComment"]);
@@ -204602,6 +204758,8 @@ var NotebookCellTags;
   NotebookCellTags2["removeCell"] = "remove-cell";
   NotebookCellTags2["removeInput"] = "remove-input";
   NotebookCellTags2["removeOutput"] = "remove-output";
+  NotebookCellTags2["skipExecution"] = "skip-execution";
+  NotebookCellTags2["raisesException"] = "raises-exception";
 })(NotebookCellTags || (NotebookCellTags = {}));
 var ParseTypesEnum;
 (function(ParseTypesEnum2) {
@@ -222168,6 +222326,12 @@ var defaultHtmlToMdastOptions = {
         attrs.alt = node3.properties.alt;
       return h4(node3, "image", attrs);
     },
+    iframe(h4, node3) {
+      const attrs = addClassAndIdentifier(node3);
+      attrs.src = String(node3.properties.src || "");
+      attrs.width = "100%";
+      return h4(node3, "iframe", attrs);
+    },
     figure(h4, node3) {
       const attrs = addClassAndIdentifier(node3);
       return h4(node3, "container", attrs, all5(h4, node3));
@@ -236886,6 +237050,8 @@ function tryRender(file, node3, value, opts) {
       output: (opts === null || opts === void 0 ? void 0 : opts.mathML) ? "mathml" : void 0,
       macros: { ...builtInMacros, ...simplifiedMacros },
       strict: (f3, m2) => {
+        if (f3 === "newLineInDisplayMode")
+          return;
         warnings2.push(`${f3}, ${m2}`);
       }
     });
@@ -237262,7 +237428,7 @@ function blockToFigureTransform(mdast2, opts) {
     const caption3 = (_d2 = (_b = (_a7 = block5.data) === null || _a7 === void 0 ? void 0 : _a7.caption) !== null && _b !== void 0 ? _b : (_c = block5.data) === null || _c === void 0 ? void 0 : _c["fig-cap"]) !== null && _d2 !== void 0 ? _d2 : (_e = block5.data) === null || _e === void 0 ? void 0 : _e["tbl-cap"];
     if (caption3) {
       const kind = (_g = (_f = block5.data) === null || _f === void 0 ? void 0 : _f.kind) !== null && _g !== void 0 ? _g : ((_h = block5.data) === null || _h === void 0 ? void 0 : _h["tbl-cap"]) ? "table" : "figure";
-      const children = (_j = parser3(caption3).children) !== null && _j !== void 0 ? _j : [];
+      const children = typeof caption3 === "string" ? (_j = parser3(caption3).children) !== null && _j !== void 0 ? _j : [] : caption3;
       children.push(...block5.children);
       const container4 = {
         type: "container",
@@ -238278,9 +238444,6 @@ function joinGatesTransform(tree, file) {
     return node3;
   });
 }
-var joinGatesPlugin = () => (tree, file) => {
-  joinGatesTransform(tree, file);
-};
 
 // ../myst-transforms/dist/glossary.js
 function glossaryTransform(mdast2, file) {
@@ -238762,12 +238925,12 @@ var DEFAULT_NUMBERING = {
   subfigure: { enabled: true, template: "Figure\xA0%s" },
   table: { enabled: true, template: "Table\xA0%s" },
   code: { enabled: true, template: "Program\xA0%s" },
-  heading_1: { enabled: false, template: "Section\xA0%s" },
-  heading_2: { enabled: false, template: "Section\xA0%s" },
-  heading_3: { enabled: false, template: "Section\xA0%s" },
-  heading_4: { enabled: false, template: "Section\xA0%s" },
-  heading_5: { enabled: false, template: "Section\xA0%s" },
-  heading_6: { enabled: false, template: "Section\xA0%s" }
+  heading_1: { template: "Section\xA0%s" },
+  heading_2: { template: "Section\xA0%s" },
+  heading_3: { template: "Section\xA0%s" },
+  heading_4: { template: "Section\xA0%s" },
+  heading_5: { template: "Section\xA0%s" },
+  heading_6: { template: "Section\xA0%s" }
 };
 function getDefaultNumberedReferenceTemplate(kind) {
   if (kind === "code")
@@ -238788,17 +238951,17 @@ function getDefaultNamedReferenceTemplate(kind = "unknown", hasTitle) {
       return name3;
   }
 }
-function getReferenceTemplate(target, numbering, numbered2, hasTitle) {
-  var _a6, _b, _c;
+function getReferenceTemplate(target, numbering, numbered2, hasTitle, offset) {
+  var _a6, _b, _c, _d2;
   const { kind, node: node3 } = target;
   let template;
   if (numbered2) {
     if (kind === TargetKind.heading && node3.type === "heading") {
-      template = (_a6 = numbering[`heading_${node3.depth}`]) === null || _a6 === void 0 ? void 0 : _a6.template;
+      template = (_b = numbering[`heading_${node3.depth - (((_a6 = numbering === null || numbering === void 0 ? void 0 : numbering.title) === null || _a6 === void 0 ? void 0 : _a6.enabled) ? 0 : 1) + (offset !== null && offset !== void 0 ? offset : 0)}`]) === null || _b === void 0 ? void 0 : _b.template;
     } else if (node3.subcontainer) {
-      template = (_b = numbering.subfigure) === null || _b === void 0 ? void 0 : _b.template;
+      template = (_c = numbering.subfigure) === null || _c === void 0 ? void 0 : _c.template;
     } else {
-      template = (_c = numbering[kind]) === null || _c === void 0 ? void 0 : _c.template;
+      template = (_d2 = numbering[kind]) === null || _d2 === void 0 ? void 0 : _d2.template;
     }
     return template !== null && template !== void 0 ? template : getDefaultNumberedReferenceTemplate(kind);
   }
@@ -238867,17 +239030,17 @@ function kindFromNode2(node3) {
     return `${node3.type}:${node3.kind}`;
   return node3.type;
 }
-function shouldEnumerate(node3, kind, numbering) {
-  var _a6, _b, _c, _d2, _e, _f, _g, _h;
+function shouldEnumerateNode(node3, kind, numbering, offset) {
+  var _a6, _b, _c, _d2, _e, _f, _g, _h, _j;
   if (node3.enumerated != null)
     return node3.enumerated;
   const enabledDefault = (_b = (_a6 = numbering.all) === null || _a6 === void 0 ? void 0 : _a6.enabled) !== null && _b !== void 0 ? _b : false;
   if (kind === "heading" && node3.type === "heading") {
-    return (_d2 = (_c = numbering[`heading_${node3.depth}`]) === null || _c === void 0 ? void 0 : _c.enabled) !== null && _d2 !== void 0 ? _d2 : enabledDefault;
+    return (_e = (_d2 = numbering[`heading_${node3.depth - (((_c = numbering === null || numbering === void 0 ? void 0 : numbering.title) === null || _c === void 0 ? void 0 : _c.enabled) ? 0 : 1) + (offset !== null && offset !== void 0 ? offset : 0)}`]) === null || _d2 === void 0 ? void 0 : _d2.enabled) !== null && _e !== void 0 ? _e : enabledDefault;
   }
   if (node3.subcontainer)
-    return (_f = (_e = numbering.subfigure) === null || _e === void 0 ? void 0 : _e.enabled) !== null && _f !== void 0 ? _f : enabledDefault;
-  return (_h = (_g = numbering[kind]) === null || _g === void 0 ? void 0 : _g.enabled) !== null && _h !== void 0 ? _h : enabledDefault;
+    return (_g = (_f = numbering.subfigure) === null || _f === void 0 ? void 0 : _f.enabled) !== null && _g !== void 0 ? _g : enabledDefault;
+  return (_j = (_h = numbering[kind]) === null || _h === void 0 ? void 0 : _h.enabled) !== null && _j !== void 0 ? _j : enabledDefault;
 }
 function incrementHeadingCounts2(depth, counts) {
   const incrementIndex = depth - 1;
@@ -238898,19 +239061,28 @@ function formatHeadingEnumerator2(counts, prefix2) {
   const out = prefix2 ? prefix2.replace(/%s/g, String(enumerator)) : String(enumerator);
   return out;
 }
-function initializeTargetCounts(numbering, initialCounts, tree) {
-  let heading6;
-  if (initialCounts === null || initialCounts === void 0 ? void 0 : initialCounts.heading) {
-    heading6 = [...initialCounts.heading];
-  } else if (tree) {
-    const headingNodes = selectAll("heading", tree).filter((node3) => node3.enumerated !== false);
-    const headingDepths = new Set(headingNodes.map((node3) => node3.depth));
-    heading6 = [1, 2, 3, 4, 5, 6].map((depth) => headingDepths.has(depth) ? 0 : null);
-  } else {
-    heading6 = [0, 0, 0, 0, 0, 0];
-  }
+function initializeTargetCounts(numbering, previousCounts, offset) {
+  const heading6 = [1, 2, 3, 4, 5, 6].map((depth, ind) => {
+    var _a6, _b, _c, _d2, _e, _f, _g, _h, _j, _k, _l;
+    const cont = (_d2 = (_b = (_a6 = numbering[`heading_${depth}`]) === null || _a6 === void 0 ? void 0 : _a6.continue) !== null && _b !== void 0 ? _b : (_c = numbering.all) === null || _c === void 0 ? void 0 : _c.continue) !== null && _d2 !== void 0 ? _d2 : false;
+    const enabled = (_h = (_f = (_e = numbering[`heading_${depth}`]) === null || _e === void 0 ? void 0 : _e.enabled) !== null && _f !== void 0 ? _f : (_g = numbering.all) === null || _g === void 0 ? void 0 : _g.enabled) !== null && _h !== void 0 ? _h : true;
+    const prevCount = (_j = previousCounts === null || previousCounts === void 0 ? void 0 : previousCounts.heading) === null || _j === void 0 ? void 0 : _j[ind];
+    if (cont && enabled && prevCount !== void 0) {
+      return prevCount;
+    }
+    if (((_k = numbering.title) === null || _k === void 0 ? void 0 : _k.enabled) && depth - 1 <= (offset !== null && offset !== void 0 ? offset : 0) && prevCount != null) {
+      return prevCount;
+    }
+    if (!((_l = numbering.title) === null || _l === void 0 ? void 0 : _l.enabled) && depth <= (offset !== null && offset !== void 0 ? offset : 0)) {
+      return null;
+    }
+    return 0;
+  });
   const targetCounts = { heading: heading6 };
-  Object.entries(initialCounts !== null && initialCounts !== void 0 ? initialCounts : {}).filter(([key2]) => key2 !== "heading").forEach(([key2, val]) => {
+  Object.entries(previousCounts !== null && previousCounts !== void 0 ? previousCounts : {}).filter(([key2]) => key2 !== "heading").filter(([key2]) => {
+    var _a6, _b;
+    return !numbering[key2] || ((_a6 = numbering[key2]) === null || _a6 === void 0 ? void 0 : _a6.continue) || ((_b = numbering.all) === null || _b === void 0 ? void 0 : _b.continue);
+  }).forEach(([key2, val]) => {
     targetCounts[key2] = { ...val };
   });
   Object.entries(numbering).forEach(([key2, val]) => {
@@ -238929,24 +239101,28 @@ function initializeTargetCounts(numbering, initialCounts, tree) {
 }
 var ReferenceState = class {
   constructor(filePath, opts) {
-    var _a6, _b;
-    this.numbering = fillNumbering(opts === null || opts === void 0 ? void 0 : opts.numbering, DEFAULT_NUMBERING);
-    this.initialCounts = opts === null || opts === void 0 ? void 0 : opts.targetCounts;
-    this.targetCounts = initializeTargetCounts(this.numbering, this.initialCounts);
-    this.identifiers = (_a6 = opts === null || opts === void 0 ? void 0 : opts.identifiers) !== null && _a6 !== void 0 ? _a6 : [];
+    var _a6, _b, _c, _d2, _e, _f, _g, _h, _j, _k, _l, _m, _o, _p;
+    this.numbering = fillNumbering((_a6 = opts === null || opts === void 0 ? void 0 : opts.frontmatter) === null || _a6 === void 0 ? void 0 : _a6.numbering, DEFAULT_NUMBERING);
+    this.offset = (_d2 = (_c = (_b = this.numbering) === null || _b === void 0 ? void 0 : _b.title) === null || _c === void 0 ? void 0 : _c.offset) !== null && _d2 !== void 0 ? _d2 : 0;
+    this.targetCounts = initializeTargetCounts(this.numbering, opts === null || opts === void 0 ? void 0 : opts.previousCounts, this.offset);
+    if ((((_e = this.numbering.title) === null || _e === void 0 ? void 0 : _e.enabled) || ((_f = this.numbering.all) === null || _f === void 0 ? void 0 : _f.enabled)) && !((_g = opts === null || opts === void 0 ? void 0 : opts.frontmatter) === null || _g === void 0 ? void 0 : _g.content_includes_title) && ((_h = this.numbering[`heading_${this.offset + 1}`]) === null || _h === void 0 ? void 0 : _h.enabled) !== false) {
+      this.targetCounts.heading = incrementHeadingCounts2(this.offset + 1, this.targetCounts.heading);
+      this.enumerator = formatHeadingEnumerator2(this.targetCounts.heading, (_k = (_j = this.numbering.title) === null || _j === void 0 ? void 0 : _j.enumerator) !== null && _k !== void 0 ? _k : (_l = this.numbering.enumerator) === null || _l === void 0 ? void 0 : _l.enumerator);
+    }
+    this.identifiers = (_m = opts === null || opts === void 0 ? void 0 : opts.identifiers) !== null && _m !== void 0 ? _m : [];
     this.targets = {};
-    this.vfile = (_b = opts === null || opts === void 0 ? void 0 : opts.vfile) !== null && _b !== void 0 ? _b : new VFile();
+    this.vfile = (_o = opts === null || opts === void 0 ? void 0 : opts.vfile) !== null && _o !== void 0 ? _o : new VFile();
     this.filePath = filePath;
     this.url = opts === null || opts === void 0 ? void 0 : opts.url;
     this.dataUrl = opts === null || opts === void 0 ? void 0 : opts.dataUrl;
-    this.title = opts === null || opts === void 0 ? void 0 : opts.title;
+    this.title = (_p = opts === null || opts === void 0 ? void 0 : opts.frontmatter) === null || _p === void 0 ? void 0 : _p.title;
   }
   addTarget(node3) {
     if (!isTargetIdentifierNode(node3))
       return;
     const kind = kindFromNode2(node3);
-    const numberNode = shouldEnumerate(node3, kind, this.numbering);
-    if (numberNode && !node3.enumerator) {
+    const numberNode = shouldEnumerateNode(node3, kind, this.numbering, this.offset);
+    if (numberNode) {
       this.incrementCount(node3, kind);
     }
     if (!node3.html_id) {
@@ -238971,8 +239147,10 @@ var ReferenceState = class {
       kind
     };
   }
-  initializeNumberedTargetCounts(tree) {
-    this.targetCounts = initializeTargetCounts(this.numbering, this.initialCounts, tree);
+  resolveEnumerator(val, enumerator) {
+    var _a6;
+    const prefix2 = enumerator !== null && enumerator !== void 0 ? enumerator : (_a6 = this.numbering.enumerator) === null || _a6 === void 0 ? void 0 : _a6.enumerator;
+    return prefix2 ? prefix2.replace(/%s/g, String(val)) : String(val);
   }
   /**
    * Increment target count state for container/equation nodes
@@ -238982,38 +239160,33 @@ var ReferenceState = class {
    * If node is subcontainer/subequation, a sub-count is incremented
    */
   incrementCount(node3, kind) {
-    var _a6, _b;
-    var _c;
+    var _a6, _b, _c, _d2, _e, _f, _g, _h, _j, _k, _l;
+    var _m;
     if (node3.enumerator) {
       return node3.enumerator;
     }
     let enumerator;
     if (kind === TargetKind.heading && node3.type === "heading") {
-      this.targetCounts.heading = incrementHeadingCounts2(node3.depth, this.targetCounts.heading);
-      enumerator = formatHeadingEnumerator2(this.targetCounts.heading, (_a6 = this.numbering.enumerator) === null || _a6 === void 0 ? void 0 : _a6.template);
+      this.targetCounts.heading = incrementHeadingCounts2(node3.depth - (((_b = (_a6 = this.numbering) === null || _a6 === void 0 ? void 0 : _a6.title) === null || _b === void 0 ? void 0 : _b.enabled) ? 0 : 1) + this.offset, this.targetCounts.heading);
+      enumerator = formatHeadingEnumerator2(this.targetCounts.heading, (_f = (_e = this.numbering[`heading_${node3.depth - (((_d2 = (_c = this.numbering) === null || _c === void 0 ? void 0 : _c.title) === null || _d2 === void 0 ? void 0 : _d2.enabled) ? 0 : 1) + this.offset}`]) === null || _e === void 0 ? void 0 : _e.enumerator) !== null && _f !== void 0 ? _f : (_g = this.numbering.enumerator) === null || _g === void 0 ? void 0 : _g.enumerator);
       node3.enumerator = enumerator;
       return enumerator;
     }
-    const resolveEnumerator = (val) => {
-      var _a7;
-      const prefix2 = (_a7 = this.numbering.enumerator) === null || _a7 === void 0 ? void 0 : _a7.template;
-      return prefix2 ? prefix2.replace(/%s/g, String(val)) : String(val);
-    };
     const countKind = kind === TargetKind.subequation ? TargetKind.equation : kind;
-    (_b = (_c = this.targetCounts)[countKind]) !== null && _b !== void 0 ? _b : _c[countKind] = { main: 0, sub: 0 };
+    (_h = (_m = this.targetCounts)[countKind]) !== null && _h !== void 0 ? _h : _m[countKind] = { main: 0, sub: 0 };
     if (node3.subcontainer || kind === TargetKind.subequation) {
       this.targetCounts[countKind].sub += 1;
       const letter = String.fromCharCode((this.targetCounts[countKind].sub - 1) % 26 + "a".charCodeAt(0));
       if (node3.subcontainer) {
-        node3.parentEnumerator = resolveEnumerator(this.targetCounts[countKind].main);
+        node3.parentEnumerator = this.resolveEnumerator(this.targetCounts[countKind].main, (_j = this.numbering[countKind]) === null || _j === void 0 ? void 0 : _j.enumerator);
         enumerator = letter;
       } else {
-        enumerator = resolveEnumerator(this.targetCounts[countKind].main + letter);
+        enumerator = this.resolveEnumerator(this.targetCounts[countKind].main + letter, (_k = this.numbering[countKind]) === null || _k === void 0 ? void 0 : _k.enumerator);
       }
     } else {
       this.targetCounts[kind].main += 1;
       this.targetCounts[kind].sub = 0;
-      enumerator = resolveEnumerator(this.targetCounts[kind].main);
+      enumerator = this.resolveEnumerator(this.targetCounts[kind].main, (_l = this.numbering[kind]) === null || _l === void 0 ? void 0 : _l.enumerator);
     }
     node3.enumerator = enumerator;
     return enumerator;
@@ -239062,17 +239235,17 @@ var ReferenceState = class {
       return;
     }
     node3.kind = target.kind;
-    addChildrenFromTargetNode(node3, target.node, this.numbering, this.vfile);
+    addChildrenFromTargetNode(node3, target.node, this.numbering, this.vfile, this.offset);
   }
 };
-function addChildrenFromTargetNode(node3, targetNode, numbering, vfile2) {
+function addChildrenFromTargetNode(node3, targetNode, numbering, vfile2, offset) {
   var _a6, _b, _c, _d2, _e;
   numbering = fillNumbering(numbering, DEFAULT_NUMBERING);
   const kind = kindFromNode2(targetNode);
   const noNodeChildren = !((_a6 = node3.children) === null || _a6 === void 0 ? void 0 : _a6.length);
   if (kind === TargetKind.heading) {
-    const numberHeading = shouldEnumerate(targetNode, TargetKind.heading, numbering);
-    const template = getReferenceTemplate({ node: targetNode, kind }, numbering, numberHeading, true);
+    const numberHeading = shouldEnumerateNode(targetNode, TargetKind.heading, numbering);
+    const template = getReferenceTemplate({ node: targetNode, kind }, numbering, numberHeading, true, offset);
     fillReferenceEnumerators2(vfile2, node3, template, targetNode, copyNode(targetNode).children);
   } else {
     const caption3 = select("caption", targetNode) || select("admonitionTitle", targetNode) || select("definitionTerm", targetNode);
@@ -239081,7 +239254,7 @@ function addChildrenFromTargetNode(node3, targetNode, numbering, vfile2) {
     if (title && node3.kind === ReferenceKind2.ref && noNodeChildren) {
       node3.children = title;
     }
-    const template = getReferenceTemplate({ node: targetNode, kind }, numbering, !!targetNode.enumerator, !!title);
+    const template = getReferenceTemplate({ node: targetNode, kind }, numbering, !!targetNode.enumerator, !!title, offset);
     fillReferenceEnumerators2(vfile2, node3, template, targetNode, title);
   }
   node3.resolved = true;
@@ -239143,8 +239316,9 @@ var MultiPageReferenceResolver = class {
   }
 };
 var enumerateTargetsTransform = (tree, opts) => {
-  opts.state.initializeNumberedTargetCounts(tree);
   visit(tree, (node3) => {
+    if (!isTargetIdentifierNode(node3))
+      return;
     if (node3.identifier || node3.enumerated || ["container", "mathGroup", "math", "heading", "proof"].includes(node3.type)) {
       opts.state.addTarget(node3);
     }
@@ -239164,9 +239338,6 @@ var enumerateTargetsTransform = (tree, opts) => {
   });
   return tree;
 };
-var enumerateTargetsPlugin = (opts) => (tree) => {
-  enumerateTargetsTransform(tree, opts);
-};
 function getCaptionLabel(kind, subcontainer) {
   if (subcontainer && (kind === "equation" || kind === "subequation"))
     return `(%s)`;
@@ -239189,7 +239360,10 @@ function addContainerCaptionNumbersTransform(tree, file, opts) {
       para = { type: "paragraph", children: [] };
       container4.children.push({ type: "caption", children: [para] });
     }
-    if (para && ((_b = para.children[0]) === null || _b === void 0 ? void 0 : _b.type) !== "captionNumber") {
+    if (para && ((_b = para.children[0]) === null || _b === void 0 ? void 0 : _b.type) === "captionNumber") {
+      para.children = para.children.slice(1);
+    }
+    if (para) {
       const captionNumber3 = {
         type: "captionNumber",
         kind: container4.kind,
@@ -239346,6 +239520,7 @@ function basicTransformations(tree, file, opts) {
   headingLabelTransform(tree);
   admonitionBlockquoteTransform(tree);
   admonitionHeadersTransform(tree);
+  joinGatesTransform(tree, file);
   blockNestingTransform(tree);
   blockMetadataTransform(tree, file);
   blockToFigureTransform(tree, opts);
@@ -241959,8 +242134,6 @@ function castSession(session) {
     cache.$citationRenderers = {};
   if (!cache.$doiRenderers)
     cache.$doiRenderers = {};
-  if (!cache.$internalReferences)
-    cache.$internalReferences = {};
   if (!cache.$externalReferences)
     cache.$externalReferences = {};
   if (!cache.$mdast)
@@ -281868,6 +282041,10 @@ var codeCellDirective = {
   },
   options: {
     ...commonDirectiveOptions("code-cell"),
+    caption: {
+      type: "myst",
+      doc: "A parsed caption for the code output."
+    },
     tags: {
       type: String,
       alias: ["tag"],
@@ -281879,7 +282056,7 @@ var codeCellDirective = {
     doc: "The code to be executed and displayed."
   },
   run(data, vfile2) {
-    var _a6, _b;
+    var _a6, _b, _c;
     const code7 = {
       type: "code",
       lang: data.arg,
@@ -281898,7 +282075,10 @@ var codeCellDirective = {
       data: {}
     };
     addCommonDirectiveOptions(data, block5);
-    const tags = parseTags((_b = data.options) === null || _b === void 0 ? void 0 : _b.tags, vfile2, data.node);
+    if ((_b = data.options) === null || _b === void 0 ? void 0 : _b.caption) {
+      block5.data.caption = [{ type: "paragraph", children: data.options.caption }];
+    }
+    const tags = parseTags((_c = data.options) === null || _c === void 0 ? void 0 : _c.tags, vfile2, data.node);
     if (tags)
       block5.data.tags = tags;
     return [block5];
@@ -282127,14 +282307,14 @@ var iframeDirective = {
   body: { type: "myst", doc: "If provided, this will be the iframe caption." },
   run(data) {
     var _a6, _b, _c, _d2, _e, _f, _g;
-    const iframe3 = {
+    const iframe4 = {
       type: "iframe",
       src: data.arg,
       width: (_a6 = data.options) === null || _a6 === void 0 ? void 0 : _a6.width,
       align: (_b = data.options) === null || _b === void 0 ? void 0 : _b.align
     };
     if ((_c = data.options) === null || _c === void 0 ? void 0 : _c.placeholder) {
-      iframe3.children = [
+      iframe4.children = [
         {
           type: "image",
           placeholder: true,
@@ -282147,13 +282327,13 @@ var iframeDirective = {
       ];
     }
     if (!data.body) {
-      addCommonDirectiveOptions(data, iframe3);
-      return [iframe3];
+      addCommonDirectiveOptions(data, iframe4);
+      return [iframe4];
     }
     const container4 = {
       type: "container",
       kind: "figure",
-      children: [iframe3, { type: "caption", children: data.body }]
+      children: [iframe4, { type: "caption", children: data.body }]
     };
     addCommonDirectiveOptions(data, container4);
     return [container4];
@@ -285701,13 +285881,13 @@ var asideDirective = {
         children: data.arg
       });
     }
-    const aside = {
+    const aside2 = {
       type: "aside",
       kind: data.name == "aside" || data.name == "margin" ? void 0 : data.name,
       children
     };
-    addCommonDirectiveOptions(data, aside);
-    return [aside];
+    addCommonDirectiveOptions(data, aside2);
+    return [aside2];
   }
 };
 
@@ -287777,7 +287957,7 @@ var MARKDOWN_IT_CONFIG = {
     }
   }
 };
-var EXCLUDE_TLDS = ["py", "md", "dot", "next", "so"];
+var EXCLUDE_TLDS = ["py", "md", "dot", "next", "so", "es"];
 
 // ../myst-parser/dist/tokensToMyst.js
 var import_he = __toESM(require_he(), 1);
@@ -288161,10 +288341,11 @@ var defaultMdast = {
   math_inline_double: {
     type: "math",
     noCloseToken: true,
-    isText: true,
+    isLeaf: true,
     getAttrs(t2) {
       var _a6;
       return {
+        value: t2.content.trim(),
         enumerated: (_a6 = t2.meta) === null || _a6 === void 0 ? void 0 : _a6.enumerated
       };
     }
@@ -288172,11 +288353,12 @@ var defaultMdast = {
   math_block: {
     type: "math",
     noCloseToken: true,
-    isText: true,
+    isLeaf: true,
     getAttrs(t2) {
       var _a6;
       const name3 = t2.info || void 0;
       return {
+        value: t2.content.trim(),
         ...normalizeLabel(name3),
         enumerated: (_a6 = t2.meta) === null || _a6 === void 0 ? void 0 : _a6.enumerated
       };
@@ -288185,11 +288367,12 @@ var defaultMdast = {
   math_block_label: {
     type: "math",
     noCloseToken: true,
-    isText: true,
+    isLeaf: true,
     getAttrs(t2) {
       var _a6;
       const name3 = t2.info || void 0;
       return {
+        value: t2.content.trim(),
         ...normalizeLabel(name3),
         enumerated: (_a6 = t2.meta) === null || _a6 === void 0 ? void 0 : _a6.enumerated
       };
@@ -288198,11 +288381,12 @@ var defaultMdast = {
   amsmath: {
     type: "math",
     noCloseToken: true,
-    isText: true,
+    isLeaf: true,
     getAttrs(t2, tokens, index4, state) {
       var _a6;
       const tight = computeAmsmathTightness(state.src, t2.map);
       const attrs = {
+        value: t2.content.trim(),
         enumerated: (_a6 = t2.meta) === null || _a6 === void 0 ? void 0 : _a6.enumerated
       };
       if (tight)
@@ -289247,63 +289431,6 @@ var exerciseDirectives = [
   solutionEndDirective
 ];
 
-// ../myst-ext-reactive/dist/index.js
-var reactiveRole = {
-  name: "r:range",
-  alias: ["r:dynamic", "r:display"],
-  body: {
-    type: String,
-    required: true
-  },
-  run(data) {
-    const parsedContent = Object.fromEntries(data.body.split('", ').map((part) => {
-      const [name3, value] = part.replace(/",?\s?$/, "").split('="');
-      if (name3.startsWith("r")) {
-        const transformed = `${name3.slice(1).toLowerCase()}Function`;
-        return [transformed, value];
-      }
-      return [name3, value];
-    }));
-    return [
-      {
-        type: data.name,
-        ...parsedContent
-      }
-    ];
-  }
-};
-var reactiveDirective = {
-  name: "r:var",
-  options: {
-    name: {
-      type: String,
-      required: true
-    },
-    value: {
-      type: String
-    },
-    rValue: {
-      type: String
-    },
-    format: {
-      type: String
-    }
-  },
-  run(data) {
-    var _a6;
-    const { name: name3, value, rValue, format } = (_a6 = data.options) !== null && _a6 !== void 0 ? _a6 : {};
-    return [
-      {
-        type: "r:var",
-        name: name3,
-        value,
-        valueFunction: rValue,
-        format
-      }
-    ];
-  }
-};
-
 // ../myst-ext-tabs/dist/index.js
 var tabSetDirective = {
   name: "tab-set",
@@ -289367,7 +289494,6 @@ function parseMyst(session, content3, file, opts) {
     directives: [
       cardDirective,
       ...gridDirectives,
-      reactiveDirective,
       proofDirective,
       ...exerciseDirectives,
       ...tabDirectives,
@@ -289376,7 +289502,7 @@ function parseMyst(session, content3, file, opts) {
     extensions: {
       frontmatter: !(opts === null || opts === void 0 ? void 0 : opts.ignoreFrontmatter)
     },
-    roles: [reactiveRole, ...(_d2 = (_c = session.plugins) === null || _c === void 0 ? void 0 : _c.roles) !== null && _d2 !== void 0 ? _d2 : []],
+    roles: [...(_d2 = (_c = session.plugins) === null || _c === void 0 ? void 0 : _c.roles) !== null && _d2 !== void 0 ? _d2 : []],
     vfile: vfile2
   });
   logMessagesFromVFile(session, vfile2);
@@ -289393,7 +289519,7 @@ var import_node_path16 = __toESM(require("path"), 1);
 var import_nbtx = __toESM(require_cjs2(), 1);
 
 // ../myst-cli/dist/version.js
-var version2 = "1.3.19";
+var version2 = "1.3.21";
 var version_default2 = version2;
 
 // ../myst-cli/dist/utils/headers.js
@@ -289712,6 +289838,26 @@ function isWhiteLabelled() {
   return ["MYSTMD_READABLE_NAME", "MYSTMD_BINARY_NAME"].some((name3) => name3 in process.env);
 }
 
+// ../myst-cli/dist/utils/fetchWithRetry.js
+async function fetchWithRetry(session, url, options, maxRetries = 3, attempt = 1, backoff = 250) {
+  try {
+    const resp = await session.fetch(url, options);
+    if (resp.ok) {
+      return resp;
+    } else {
+      session.log.warn(`Fetch of ${url} failed with HTTP status ${resp.status} for URL: ${url} (Attempt #${attempt})`);
+    }
+  } catch (error) {
+    session.log.warn(`Fetch of ${url} threw an error (Attempt #${attempt})`, error);
+  }
+  if (attempt < maxRetries) {
+    session.log.debug(`Waiting ${backoff}ms before retry #${attempt + 1}...`);
+    await new Promise((resolve9) => setTimeout(resolve9, backoff));
+    return fetchWithRetry(session, url, options, maxRetries, attempt + 1, backoff * 2);
+  }
+  throw new Error(`Failed to fetch ${url} after ${maxRetries} attempts.`);
+}
+
 // ../myst-cli/dist/utils/ffmpeg.js
 var ffmpeg_exports = {};
 __export(ffmpeg_exports, {
@@ -292500,10 +292646,10 @@ var Minimatch = class {
     let ai = 0;
     let bi = 0;
     let result = [];
-    let which7 = "";
+    let which8 = "";
     while (ai < a2.length && bi < b.length) {
       if (a2[ai] === b[bi]) {
-        result.push(which7 === "b" ? b[bi] : a2[ai]);
+        result.push(which8 === "b" ? b[bi] : a2[ai]);
         ai++;
         bi++;
       } else if (emptyGSMatch && a2[ai] === "**" && b[bi] === a2[ai + 1]) {
@@ -292513,16 +292659,16 @@ var Minimatch = class {
         result.push(b[bi]);
         bi++;
       } else if (a2[ai] === "*" && b[bi] && (this.options.dot || !b[bi].startsWith(".")) && b[bi] !== "**") {
-        if (which7 === "b")
+        if (which8 === "b")
           return false;
-        which7 = "a";
+        which8 = "a";
         result.push(a2[ai]);
         ai++;
         bi++;
       } else if (b[bi] === "*" && a2[ai] && (this.options.dot || !a2[ai].startsWith(".")) && a2[ai] !== "**") {
-        if (which7 === "a")
+        if (which8 === "a")
           return false;
-        which7 = "b";
+        which8 = "b";
         result.push(b[bi]);
         ai++;
         bi++;
@@ -301295,6 +301441,7 @@ async function resolvePageDownloads(session, file, projectPath) {
   return resolvedDownloads;
 }
 async function localToManifestProject(session, projectPath, projectSlug) {
+  var _a6, _b;
   if (!projectPath)
     return null;
   const state = session.store.getState();
@@ -301302,23 +301449,25 @@ async function localToManifestProject(session, projectPath, projectSlug) {
   const proj = selectors_exports.selectLocalProject(state, projectPath);
   if (!proj)
     return null;
-  const { index: index4 } = proj;
+  const { index: index4, file: indexFile } = proj;
   const projectFileInfo = selectors_exports.selectFileInfo(state, proj.file);
   const projectTitle = (projConfig === null || projConfig === void 0 ? void 0 : projConfig.title) || projectFileInfo.title || proj.index;
+  const cache = castSession(session);
   const pages = await Promise.all(proj.pages.map(async (page) => {
-    var _a6, _b, _c, _d2, _e, _f, _g, _h;
+    var _a7, _b2, _c, _d2, _e, _f, _g, _h, _j, _k;
     if ("file" in page) {
       const fileInfo3 = selectors_exports.selectFileInfo(state, page.file);
       const title = fileInfo3.title || fileTitle(page.file);
-      const short_title = (_a6 = fileInfo3.short_title) !== null && _a6 !== void 0 ? _a6 : void 0;
-      const description = (_b = fileInfo3.description) !== null && _b !== void 0 ? _b : "";
+      const short_title = (_a7 = fileInfo3.short_title) !== null && _a7 !== void 0 ? _a7 : void 0;
+      const description = (_b2 = fileInfo3.description) !== null && _b2 !== void 0 ? _b2 : "";
       const thumbnail2 = (_c = fileInfo3.thumbnail) !== null && _c !== void 0 ? _c : "";
       const thumbnailOptimized = (_d2 = fileInfo3.thumbnailOptimized) !== null && _d2 !== void 0 ? _d2 : "";
       const banner2 = (_e = fileInfo3.banner) !== null && _e !== void 0 ? _e : "";
       const bannerOptimized = (_f = fileInfo3.bannerOptimized) !== null && _f !== void 0 ? _f : "";
       const date = (_g = fileInfo3.date) !== null && _g !== void 0 ? _g : "";
       const tags = (_h = fileInfo3.tags) !== null && _h !== void 0 ? _h : [];
-      const { slug, level } = page;
+      const { slug, level, file } = page;
+      const { frontmatter: frontmatter2 } = (_k = (_j = cache.$getMdast(file)) === null || _j === void 0 ? void 0 : _j.post) !== null && _k !== void 0 ? _k : {};
       const projectPage = {
         slug,
         title,
@@ -301330,7 +301479,8 @@ async function localToManifestProject(session, projectPath, projectSlug) {
         banner: banner2,
         bannerOptimized,
         tags,
-        level
+        level,
+        enumerator: frontmatter2 === null || frontmatter2 === void 0 ? void 0 : frontmatter2.enumerator
       };
       return projectPage;
     }
@@ -301343,6 +301493,7 @@ async function localToManifestProject(session, projectPath, projectSlug) {
   const parts = resolveFrontmatterParts(session, projFrontmatter);
   const banner = await transformBanner(session, import_node_path29.default.join(projectPath, "myst.yml"), projFrontmatter, session.publicPath(), { altOutputFolder: "/", webp: true });
   const thumbnail = await transformThumbnail(session, null, import_node_path29.default.join(projectPath, "myst.yml"), projFrontmatter, session.publicPath(), { altOutputFolder: "/", webp: true });
+  const { frontmatter } = (_b = (_a6 = cache.$getMdast(indexFile)) === null || _a6 === void 0 ? void 0 : _a6.post) !== null && _b !== void 0 ? _b : {};
   return {
     ...projFrontmatter,
     // TODO: a null in the project frontmatter should not fall back to index page
@@ -301358,6 +301509,7 @@ async function localToManifestProject(session, projectPath, projectSlug) {
     title: projectTitle || "Untitled",
     slug: projectSlug,
     index: index4,
+    enumerator: frontmatter === null || frontmatter === void 0 ? void 0 : frontmatter.enumerator,
     pages
   };
 }
@@ -301720,7 +301872,7 @@ async function transformMystXRefs(session, vfile2, mdast2, frontmatter) {
   let number2 = 0;
   await Promise.all([
     ...nodes.map(async (node3) => {
-      var _a6, _b, _c;
+      var _a6, _b, _c, _d2, _e;
       if (!node3.identifier) {
         const data = await fetchMystLinkData(session, node3, vfile2);
         if (!data)
@@ -301735,7 +301887,7 @@ async function transformMystXRefs(session, vfile2, mdast2, frontmatter) {
           maxNodes: 1
         });
         if (targets === null || targets === void 0 ? void 0 : targets.length) {
-          addChildrenFromTargetNode(node3, targets[0], frontmatter.numbering, vfile2);
+          addChildrenFromTargetNode(node3, targets[0], frontmatter.numbering, vfile2, (_e = (_d2 = frontmatter.numbering) === null || _d2 === void 0 ? void 0 : _d2.title) === null || _e === void 0 ? void 0 : _e.offset);
         }
       }
       number2 += 1;
@@ -303127,6 +303279,10 @@ function reduceOutputs(session, mdast2, file, writeFolder, opts) {
   const cache = castSession(session);
   outputs.forEach((node3) => {
     var _a6, _b, _c;
+    if (node3.visibility === "remove" || node3.visibility === "hide") {
+      node3.type = "__delete__";
+      return;
+    }
     if (!((_a6 = node3.data) === null || _a6 === void 0 ? void 0 : _a6.length) && !((_b = node3.children) === null || _b === void 0 ? void 0 : _b.length)) {
       node3.type = "__delete__";
       return;
@@ -303169,6 +303325,9 @@ function reduceOutputs(session, mdast2, file, writeFolder, opts) {
           ]
         };
         htmlTransform(htmlTree);
+        if (selectAll("image", htmlTree).find((htmlImage) => !htmlImage.url)) {
+          return void 0;
+        }
         return htmlTree.children;
       } else if (content_type.startsWith("image/")) {
         const path44 = writeCachedOutputToFile(session, hash, cache.$outputs[hash], writeFolder, {
@@ -303287,11 +303446,11 @@ function isCellBlock(node3) {
 }
 function codeBlockRaisesException(node3) {
   var _a6, _b, _c;
-  return !!((_c = (_b = (_a6 = node3.data) === null || _a6 === void 0 ? void 0 : _a6.tags) === null || _b === void 0 ? void 0 : _b.includes) === null || _c === void 0 ? void 0 : _c.call(_b, "raises-exception"));
+  return !!((_c = (_b = (_a6 = node3.data) === null || _a6 === void 0 ? void 0 : _a6.tags) === null || _b === void 0 ? void 0 : _b.includes) === null || _c === void 0 ? void 0 : _c.call(_b, NotebookCellTags.raisesException));
 }
 function codeBlockSkipsExecution(node3) {
   var _a6, _b, _c;
-  return !!((_c = (_b = (_a6 = node3.data) === null || _a6 === void 0 ? void 0 : _a6.tags) === null || _b === void 0 ? void 0 : _b.includes) === null || _c === void 0 ? void 0 : _c.call(_b, "skip-execution"));
+  return !!((_c = (_b = (_a6 = node3.data) === null || _a6 === void 0 ? void 0 : _a6.tags) === null || _b === void 0 ? void 0 : _b.includes) === null || _c === void 0 ? void 0 : _c.call(_b, NotebookCellTags.skipExecution));
 }
 function isInlineExpression(node3) {
   return node3.type === "inlineExpression";
@@ -303402,7 +303561,6 @@ async function kernelExecutionTransform(tree, vfile2, opts) {
 // ../myst-execute/dist/manager.js
 var import_which4 = __toESM(require_lib16(), 1);
 var import_node_child_process = require("child_process");
-var readline = __toESM(require("readline"), 1);
 
 // ../myst-execute/node_modules/chalk/source/vendor/ansi-styles/index.js
 var ANSI_BACKGROUND_OFFSET3 = 10;
@@ -303894,36 +304052,6 @@ var chalkStderr3 = createChalk3({ level: stderrColor3 ? stderrColor3.level : 0 }
 var source_default3 = chalk3;
 
 // ../myst-execute/dist/manager.js
-async function findExistingJupyterServer(session) {
-  const pythonPath = import_which4.default.sync("python");
-  const listProc = (0, import_node_child_process.spawn)(pythonPath, ["-m", "jupyter_server", "list", "--json"]);
-  const reader = readline.createInterface({ input: listProc.stdout });
-  const servers = [];
-  for await (const line2 of reader) {
-    let server;
-    try {
-      server = JSON.parse(line2);
-    } catch {
-    }
-    if ((server === null || server === void 0 ? void 0 : server.base_url) !== void 0) {
-      servers.push(server);
-    }
-  }
-  if (!servers.length) {
-    return void 0;
-  }
-  servers.sort((a2, b) => a2.pid - b.pid);
-  for (const entry of servers) {
-    const response = await session.fetch(`${entry.url}?token=${entry.token}`);
-    if (response.ok) {
-      return {
-        baseUrl: entry.url,
-        token: entry.token
-      };
-    }
-  }
-  return void 0;
-}
 async function launchJupyterServer(contentPath, log) {
   log.info(`\u{1F680} ${source_default3.yellowBright("Starting new Jupyter server")}`);
   const pythonPath = import_which4.default.sync("python");
@@ -304019,6 +304147,33 @@ async function rawDirectiveTransform(tree, vfile2) {
   });
 }
 
+// ../myst-cli/dist/utils/addEditUrl.js
+var import_which5 = __toESM(require_lib15(), 1);
+function gitCommandAvailable() {
+  return !!import_which5.default.sync("git", { nothrow: true });
+}
+async function addEditUrl(session, frontmatter, file) {
+  if (!frontmatter.github)
+    return;
+  if (frontmatter.edit_url || frontmatter.edit_url === null)
+    return;
+  if (!gitCommandAvailable())
+    return;
+  try {
+    const gitLog = silentLogger();
+    const getGitBranch = makeExecutable("git rev-parse --abbrev-ref HEAD", gitLog);
+    const gitBranch = (await getGitBranch()).trim();
+    const getGitRoot = makeExecutable("git rev-parse --show-toplevel", gitLog);
+    const gitRoot = (await getGitRoot()).trim();
+    if (gitBranch && gitRoot && file.startsWith(gitRoot)) {
+      frontmatter.edit_url = `${frontmatter.github}/blob/${gitBranch}${file.replace(gitRoot, "")}`;
+      session.log.debug(`Added edit URL ${frontmatter.edit_url} to ${file}`);
+    }
+  } catch {
+    session.log.debug(`Unable to add edit URL to ${file}`);
+  }
+}
+
 // ../myst-cli/dist/process/mdast.js
 var LINKS_SELECTOR = "link,card,linkBlock";
 var pluginUtils = { select, selectAll };
@@ -304029,17 +304184,24 @@ var htmlHandlers = {
     return result;
   }
 };
-function referenceFileFromPartFile(session, partFile) {
-  const state = session.store.getState();
-  const partDeps = selectors_exports.selectDependentFiles(state, partFile);
-  if (partDeps.length > 0)
-    return partDeps[0];
-  const file = selectors_exports.selectFileFromPart(state, partFile);
-  return file !== null && file !== void 0 ? file : partFile;
-}
 async function transformMdast(session, opts) {
   var _a6, _b, _c, _d2;
-  const { file, projectPath, pageSlug, projectSlug, imageExtensions, extraTransforms, watchMode = false, minifyMaxCharacters, index: index4, titleDepth, execute } = opts;
+  const {
+    file,
+    projectPath,
+    pageSlug,
+    projectSlug,
+    imageExtensions,
+    extraTransforms,
+    watchMode = false,
+    minifyMaxCharacters,
+    index: index4,
+    titleDepth,
+    // Related to title set in markdown, rather than frontmatter
+    offset,
+    // Related to multi-page nesting
+    execute
+  } = opts;
   const toc = tic();
   const { store, log } = session;
   const cache = castSession(session);
@@ -304063,16 +304225,18 @@ async function transformMdast(session, opts) {
       fileWarn(vfile2, message, { ruleId: RuleId.validPageFrontmatter });
     }
   }, projectPath);
+  if (offset) {
+    if (!frontmatter.numbering)
+      frontmatter.numbering = {};
+    if (!frontmatter.numbering.title)
+      frontmatter.numbering.title = {};
+    if (frontmatter.numbering.title.offset == null)
+      frontmatter.numbering.title.offset = offset;
+  }
+  await addEditUrl(session, frontmatter, file);
   const references = {
     cite: { order: [], data: {} }
   };
-  const refFile = kind === SourceFileKind.Part ? referenceFileFromPartFile(session, file) : file;
-  const state = new ReferenceState(refFile, {
-    numbering: frontmatter.numbering,
-    identifiers,
-    vfile: vfile2
-  });
-  cache.$internalReferences[file] = state;
   importMdastFromJson(session, file, mdast2);
   await includeFilesTransform(session, file, mdast2, frontmatter, vfile2);
   rawDirectiveTransform(mdast2, vfile2);
@@ -304080,12 +304244,13 @@ async function transformMdast(session, opts) {
   const pipe = unified().use(reconstructHtmlPlugin).use(htmlPlugin, { htmlHandlers }).use(basicTransformationsPlugin, {
     parser: (content3) => parseMyst(session, content3, file),
     firstDepth: (titleDepth !== null && titleDepth !== void 0 ? titleDepth : 1) + (frontmatter.content_includes_title ? 0 : 1)
-  }).use(inlineMathSimplificationPlugin).use(mathPlugin, { macros: frontmatter.math }).use(glossaryPlugin).use(abbreviationPlugin, { abbreviations: frontmatter.abbreviations }).use(indexIdentifierPlugin).use(enumerateTargetsPlugin, { state }).use(joinGatesPlugin);
+  }).use(inlineMathSimplificationPlugin).use(mathPlugin, { macros: frontmatter.math });
   (_c = session.plugins) === null || _c === void 0 ? void 0 : _c.transforms.forEach((t2) => {
     if (t2.stage !== "document")
       return;
     pipe.use(t2.plugin, void 0, pluginUtils);
   });
+  pipe.use(glossaryPlugin).use(abbreviationPlugin, { abbreviations: frontmatter.abbreviations }).use(indexIdentifierPlugin);
   await pipe.run(mdast2, vfile2);
   propagateBlockDataToCode(session, vfile2, mdast2);
   cache.$citationRenderers[file] = await transformLinkedDOIs(session, vfile2, mdast2, cache.$doiRenderers, file);
@@ -304142,6 +304307,7 @@ async function transformMdast(session, opts) {
     frontmatter,
     mdast: mdast2,
     references,
+    identifiers,
     widgets
   };
   const cachedMdast = cache.$getMdast(file);
@@ -304167,8 +304333,7 @@ async function postProcessMdast(session, { file, checkLinks, pageReferenceStates
   const vfile2 = new VFile();
   vfile2.path = file;
   const { mdast: mdast2, dependencies, frontmatter } = mdastPost;
-  const fileState = cache.$internalReferences[file];
-  const state = pageReferenceStates ? new MultiPageReferenceResolver(pageReferenceStates, file, vfile2) : fileState;
+  const state = new MultiPageReferenceResolver(pageReferenceStates, file, vfile2);
   const externalReferences = Object.values(cache.$externalReferences);
   const transformers = [
     ...extraLinkTransformers || [],
@@ -304184,12 +304349,12 @@ async function postProcessMdast(session, { file, checkLinks, pageReferenceStates
     // Links static files and internally linked files
   ];
   resolveLinksAndCitationsTransform(mdast2, { state, transformers });
-  linksTransform(mdast2, state.vfile, {
+  linksTransform(mdast2, vfile2, {
     transformers,
     selector: LINKS_SELECTOR
   });
   await transformLinkedRORs(session, vfile2, mdast2, file);
-  resolveReferencesTransform(mdast2, state.vfile, { state, transformers });
+  resolveReferencesTransform(mdast2, vfile2, { state, transformers });
   await transformMystXRefs(session, vfile2, mdast2, frontmatter);
   await embedTransform(session, mdast2, file, dependencies, state);
   const pipe = unified();
@@ -304201,7 +304366,6 @@ async function postProcessMdast(session, { file, checkLinks, pageReferenceStates
   await pipe.run(mdast2, vfile2);
   keysTransform(mdast2);
   checkLinkTextTransform(mdast2, externalReferences, vfile2);
-  logMessagesFromVFile(session, fileState.vfile);
   logMessagesFromVFile(session, vfile2);
   log.debug(toc(`Transformed mdast cross references and links for "${file}" in %s`));
   if (checkLinks)
@@ -304529,10 +304693,36 @@ function warnOnDuplicateIdentifiers(session, states) {
     });
   });
 }
+function referenceFileFromPartFile(session, partFile) {
+  const state = session.store.getState();
+  const partDeps = selectors_exports.selectDependentFiles(state, partFile);
+  if (partDeps.length > 0)
+    return partDeps[0];
+  const file = selectors_exports.selectFileFromPart(state, partFile);
+  return file !== null && file !== void 0 ? file : partFile;
+}
 function selectPageReferenceStates(session, pages, opts) {
   const cache = castSession(session);
-  const pageReferenceStates = pages.map((page) => {
-    const state = cache.$internalReferences[page.file];
+  let previousCounts;
+  const pageReferenceStates = pages.map(({ file }) => {
+    var _a6, _b;
+    const { frontmatter, identifiers, mdast: mdast2, kind } = (_b = (_a6 = cache.$getMdast(file)) === null || _a6 === void 0 ? void 0 : _a6.post) !== null && _b !== void 0 ? _b : {};
+    const vfile2 = new VFile();
+    vfile2.path = file;
+    const refFile = kind === SourceFileKind.Part ? referenceFileFromPartFile(session, file) : file;
+    const state = new ReferenceState(refFile, {
+      frontmatter,
+      identifiers,
+      previousCounts,
+      vfile: vfile2
+    });
+    if (frontmatter && !frontmatter.enumerator) {
+      frontmatter.enumerator = state.enumerator;
+    }
+    if (mdast2)
+      enumerateTargetsTransform(mdast2, { state });
+    previousCounts = state.targetCounts;
+    logMessagesFromVFile(session, vfile2);
     if (state) {
       const selectedFile = selectors_exports.selectFileInfo(session.store.getState(), state.filePath);
       if (selectedFile === null || selectedFile === void 0 ? void 0 : selectedFile.url)
@@ -304547,18 +304737,13 @@ function selectPageReferenceStates(session, pages, opts) {
   }).filter((state) => !!state);
   if (!(opts === null || opts === void 0 ? void 0 : opts.suppressWarnings))
     warnOnDuplicateIdentifiers(session, pageReferenceStates);
-  pages.forEach((page) => {
+  pageReferenceStates.forEach((state) => {
     var _a6, _b;
-    const state = cache.$internalReferences[page.file];
-    if (!state)
-      return;
-    const { mdast: mdast2 } = (_b = (_a6 = cache.$getMdast(page.file)) === null || _a6 === void 0 ? void 0 : _a6.post) !== null && _b !== void 0 ? _b : {};
+    const { mdast: mdast2 } = (_b = (_a6 = cache.$getMdast(state.filePath)) === null || _a6 === void 0 ? void 0 : _a6.post) !== null && _b !== void 0 ? _b : {};
     if (!mdast2)
       return;
-    const vfile2 = new VFile();
-    vfile2.path = page.file;
-    buildIndexTransform(mdast2, vfile2, state, new MultiPageReferenceResolver(pageReferenceStates, state.filePath));
-    logMessagesFromVFile(session, vfile2);
+    buildIndexTransform(mdast2, state.vfile, state, new MultiPageReferenceResolver(pageReferenceStates, state.filePath));
+    logMessagesFromVFile(session, state.vfile);
   });
   return pageReferenceStates;
 }
@@ -304609,6 +304794,8 @@ async function fastProcessFile(session, { file, pageSlug, projectPath, projectSl
   const fileParts = selectors_exports.selectFileParts(state, file);
   const projectParts = selectors_exports.selectProjectParts(state, projectPath);
   await Promise.all([file, ...fileParts].map(async (f3) => {
+    var _a6;
+    const level = (_a6 = pages.find((page) => page.file === file)) === null || _a6 === void 0 ? void 0 : _a6.level;
     return transformMdast(session, {
       file: f3,
       imageExtensions: imageExtensions !== null && imageExtensions !== void 0 ? imageExtensions : WEB_IMAGE_EXTENSIONS,
@@ -304618,7 +304805,8 @@ async function fastProcessFile(session, { file, pageSlug, projectPath, projectSl
       watchMode: true,
       extraTransforms,
       index: project.index,
-      execute
+      execute,
+      offset: level ? level - 1 : void 0
     });
   }));
   const pageReferenceStates = selectPageReferenceStates(session, [
@@ -304627,18 +304815,18 @@ async function fastProcessFile(session, { file, pageSlug, projectPath, projectSl
       return { file: part };
     })
   ]);
-  await Promise.all([file, ...fileParts].map(async (f3) => {
+  await Promise.all([...pages.map((p5) => p5.file), ...fileParts].map(async (f3) => {
     return postProcessMdast(session, {
       file: f3,
       pageReferenceStates,
       extraLinkTransformers
     });
   }));
-  await Promise.all([file, ...fileParts].map(async (f3) => {
+  await Promise.all([...pages.map((p5) => p5.file), ...fileParts].map(async (f3) => {
     var _a6, _b;
     const { mdast: mdast2, frontmatter } = (_b = (_a6 = castSession(session).$getMdast(f3)) === null || _a6 === void 0 ? void 0 : _a6.post) !== null && _b !== void 0 ? _b : {};
-    if (mdast2) {
-      await finalizeMdast(session, mdast2, frontmatter !== null && frontmatter !== void 0 ? frontmatter : {}, f3, {
+    if (mdast2 && frontmatter) {
+      await finalizeMdast(session, mdast2, frontmatter, f3, {
         imageWriteFolder: imageWriteFolder !== null && imageWriteFolder !== void 0 ? imageWriteFolder : session.publicPath(),
         imageAltOutputFolder: imageAltOutputFolder !== null && imageAltOutputFolder !== void 0 ? imageAltOutputFolder : "/",
         imageExtensions: imageExtensions !== null && imageExtensions !== void 0 ? imageExtensions : WEB_IMAGE_EXTENSIONS,
@@ -304648,9 +304836,14 @@ async function fastProcessFile(session, { file, pageSlug, projectPath, projectSl
       });
     }
   }));
-  if (pageSlug) {
-    await writeFile(session, { file, pageSlug, projectSlug, projectPath });
-  }
+  await Promise.all(pages.map(async (page) => {
+    return writeFile(session, {
+      file: page.file,
+      projectSlug,
+      projectPath,
+      pageSlug: page.slug
+    });
+  }));
   session.log.info(toc(`\u{1F4D6} Built ${file} in %s.`));
   await writeSiteManifest(session, { defaultTemplate });
 }
@@ -304684,7 +304877,10 @@ async function processProject(session, siteProject, opts) {
   const projectParts = selectors_exports.selectProjectParts(session.store.getState(), siteProject.path).map((part) => {
     return { file: part };
   });
-  const pagesToTransform = [...pages, ...projectParts];
+  const pagesToTransform = [
+    ...pages,
+    ...projectParts
+  ];
   const usedImageExtensions = imageExtensions !== null && imageExtensions !== void 0 ? imageExtensions : WEB_IMAGE_EXTENSIONS;
   await Promise.all(pagesToTransform.map((page) => transformMdast(session, {
     file: page.file,
@@ -304695,7 +304891,8 @@ async function processProject(session, siteProject, opts) {
     watchMode,
     execute,
     extraTransforms,
-    index: project.index
+    index: project.index,
+    offset: page.level ? page.level - 1 : void 0
   })));
   const pageReferenceStates = selectPageReferenceStates(session, pagesToTransform);
   await Promise.all(pagesToTransform.map((page) => postProcessMdast(session, {
@@ -306058,7 +306255,7 @@ var handlers3 = {
       state.write("\\end{frame}\n\n");
       return;
     }
-    if (node3.visibility === "remove")
+    if (node3.visibility === "remove" || node3.visibility === "hide")
       return;
     if (metadataTags.includes("no-tex"))
       return;
@@ -306100,9 +306297,8 @@ var handlers3 = {
   },
   code(node3, state) {
     var _a6;
-    if (node3.visibility === "remove") {
+    if (node3.visibility === "remove" || node3.visibility === "hide")
       return;
-    }
     addIndexEntries(node3, state);
     let start = "\\begin{verbatim}\n";
     let end = "\n\\end{verbatim}";
@@ -306808,7 +307004,7 @@ function hasGlossary(mdast2) {
 var import_adm_zip3 = __toESM(require_adm_zip(), 1);
 var import_node_fs36 = __toESM(require("fs"), 1);
 var import_node_path46 = __toESM(require("path"), 1);
-var import_which5 = __toESM(require_lib15(), 1);
+var import_which6 = __toESM(require_lib15(), 1);
 
 // ../myst-to-typst/dist/container.js
 var CaptionKind2;
@@ -306819,7 +307015,9 @@ var CaptionKind2;
   CaptionKind3["table"] = "table";
 })(CaptionKind2 || (CaptionKind2 = {}));
 function renderFigureChild(node3, state) {
-  const useBrackets = node3.type !== "image" && node3.type !== "table";
+  var _a6;
+  const bracketNode = node3.type === "div" && ((_a6 = node3.children) === null || _a6 === void 0 ? void 0 : _a6.length) === 1 ? node3.children[0] : node3;
+  const useBrackets = bracketNode.type !== "image" && bracketNode.type !== "table";
   if (node3.type === "legend") {
     state.useMacro('#let legendStyle = (fill: black.lighten(20%), size: 8pt, style: "italic")');
     state.write("text(..legendStyle)");
@@ -306840,7 +307038,7 @@ function getDefaultCaptionSupplement(kind) {
   return `${domain.slice(0, 1).toUpperCase()}${domain.slice(1)}`;
 }
 var containerHandler2 = (node3, state) => {
-  var _a6, _b;
+  var _a6, _b, _c;
   if (state.data.isInTable) {
     fileError(state.file, "Unable to render typst figure inside table", {
       node: node3,
@@ -306887,6 +307085,13 @@ var containerHandler2 = (node3, state) => {
     state.data.isInBlockquote = prevIsInBlockquote;
     return;
   }
+  if ((_c = node3.enumerator) === null || _c === void 0 ? void 0 : _c.endsWith(".1")) {
+    state.write(`#set figure(numbering: "${node3.enumerator}")
+`);
+    state.write(`#counter(figure.where(kind: "${kind}")).update(0)
+
+`);
+  }
   if (nonCaptions && nonCaptions.length > 1) {
     const allSubFigs = nonCaptions.filter((item) => item.type === "container").length === nonCaptions.length;
     state.useMacro('#import "@preview/subpar:0.1.1"');
@@ -306998,8 +307203,8 @@ var textOnlyReplacements3 = {
   "\xA9": "#emoji.copyright ",
   "\xAE": "#emoji.reg ",
   "\u2122": "#emoji.tm ",
-  "<": "\\< ",
-  ">": "\\> ",
+  "<": "\\<",
+  ">": "\\>",
   "\xA0": "~",
   "\u202F": "~"
   // eslint-disable-next-line no-irregular-whitespace
@@ -307055,9 +307260,11 @@ var mathReplacements2 = {
   "\xD7": "times",
   \u0391: "A",
   \u03B1: "alpha",
+  "\u{1D736}": "alpha",
   \u0392: "B",
   \u03B2: "beta",
   \u00DF: "beta",
+  "\u{1D737}": "beta",
   \u0393: "Gamma",
   \u03B3: "gamma",
   \u0394: "Delta",
@@ -307065,6 +307272,7 @@ var mathReplacements2 = {
   \u03B4: "delta",
   \u0395: "E",
   \u03B5: "epsilon",
+  "\u{1D774}": "epsilon",
   \u0396: "Z",
   \u03B6: "zeta",
   \u0397: "H",
@@ -307189,6 +307397,43 @@ function getLatexImageWidth2(width) {
   return `${lineWidth}%`;
 }
 
+// ../../node_modules/tex-to-typst/dist/utils.js
+var BRACKETS = {
+  "[": "bracket.l",
+  "]": "bracket.r",
+  "{": "brace.l",
+  "}": "brace.r",
+  "(": "paren.l",
+  ")": "paren.r",
+  "|": "bar.v",
+  lfloor: "floor.l",
+  "\u230A": "floor.l",
+  rfloor: "floor.r",
+  "\u230B": "floor.r",
+  rceil: "ceil.r",
+  "\u2309": "ceil.r",
+  lceil: "ceil.l",
+  "\u2308": "ceil.l"
+};
+function areBracketsBalanced(input3) {
+  const stack = [];
+  const bracketMap = {
+    ")": "(",
+    "]": "[",
+    "}": "{"
+  };
+  for (const char of input3) {
+    if (char === "(" || char === "[" || char === "{") {
+      stack.push(char);
+    } else if (char === ")" || char === "]" || char === "}") {
+      if (!stack.length || bracketMap[char] !== stack.pop()) {
+        return false;
+      }
+    }
+  }
+  return stack.length === 0;
+}
+
 // ../../node_modules/tex-to-typst/dist/macros.js
 function isEmptyNode(node3) {
   if (!(node3 === null || node3 === void 0 ? void 0 : node3.content) || node3.content.length === 0)
@@ -307196,12 +307441,25 @@ function isEmptyNode(node3) {
   return false;
 }
 var typstStrings = {
-  ",": (state) => state.data.inFunction ? "comma" : ",",
+  ",": (state) => state.data.inFunction && state._currentFunctions.slice(-1)[0] !== "text" ? "comma" : ",",
   "&": (state) => state.data.inArray ? "," : "&",
   "/": "\\/",
   ";": "\\;",
-  "~": "med"
+  "~": "med",
+  '"': '\\"'
 };
+function createBrackets(scale) {
+  return (state, node3) => {
+    var _a6;
+    const args = node3.args;
+    node3.args = [];
+    const b = ((_a6 = args === null || args === void 0 ? void 0 : args[0].content) === null || _a6 === void 0 ? void 0 : _a6[0]).content;
+    const typstB = BRACKETS[b];
+    if (!typstB)
+      throw new Error(`Undefined left bracket: ${b}`);
+    return `#scale(x: ${scale}, y: ${scale})[$${typstB}$]`;
+  };
+}
 function splitStrings(node3) {
   var _a6, _b, _c;
   if (((_b = (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6[0].content) === null || _b === void 0 ? void 0 : _b.length) === 1 && ((_c = node3.args) === null || _c === void 0 ? void 0 : _c[0].content)[0].type === "string") {
@@ -307209,14 +307467,23 @@ function splitStrings(node3) {
   }
 }
 var typstMacros = {
+  $: "\\$",
   cdot: "dot.op",
   to: "arrow.r",
   rightarrow: "arrow.r",
+  Rightarrow: "arrow.r.double",
   leftarrow: "arrow.l",
+  Leftarrow: "arrow.l.double",
   leftrightarrow: "arrow.l.r",
   gets: "arrow.l",
+  rightharpoonup: "harpoon.rt",
+  rightharpoondown: "harpoon.rb",
+  leftharpoonup: "harpoon.lt",
+  leftharpoondown: "harpoon.lb",
   infin: "infinity",
+  // This is a mathjax only thing, https://docs.mathjax.org/en/v2.7-latest/tex.html#i
   infty: "infinity",
+  // oo
   nonumber: "",
   int: "integral",
   iint: "integral.double",
@@ -307227,11 +307494,25 @@ var typstMacros = {
     return "root";
   },
   vec: "arrow",
+  check: "caron",
+  bar: "macron",
   mathbf: "bold",
   boldsymbol: "bold",
+  bf: "bold",
   mathrm: "upright",
   textrm: "upright",
   rm: "upright",
+  mbox: (state, node3) => {
+    var _a6;
+    const arg2 = (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6[0];
+    node3.args = [];
+    state.openFunction("upright");
+    state.openFunction("text");
+    state.writeChildren(arg2);
+    state.closeFunction();
+    state.closeFunction();
+    return "";
+  },
   mathcal: "cal",
   mathfrak: "frak",
   pm: "plus.minus",
@@ -307244,6 +307525,18 @@ var typstMacros = {
     splitStrings(node3);
     return "^";
   },
+  big: createBrackets("120%"),
+  bigl: createBrackets("120%"),
+  bigr: createBrackets("120%"),
+  Big: createBrackets("180%"),
+  Bigl: createBrackets("180%"),
+  Bigr: createBrackets("180%"),
+  bigg: createBrackets("240%"),
+  biggr: createBrackets("240%"),
+  biggl: createBrackets("240%"),
+  Bigg: createBrackets("300%"),
+  Biggl: createBrackets("300%"),
+  Biggr: createBrackets("300%"),
   left: (state, node3) => {
     var _a6;
     const args = node3.args;
@@ -307259,8 +307552,11 @@ var typstMacros = {
       return "|";
     if (left2 === ".")
       return "";
+    if (left2 === "lbrack")
+      return "[";
     throw new Error(`Undefined left bracket: ${left2}`);
   },
+  lbrack: "[",
   right: (state, node3) => {
     var _a6;
     const args = node3.args;
@@ -307276,18 +307572,38 @@ var typstMacros = {
       return "|";
     if (right2 === ".")
       return "";
+    if (right2 === "rbrack")
+      return "]";
     throw new Error(`Undefined right bracket: ${right2}`);
   },
+  rbrack: "]",
   operatorname: (state, node3) => {
     var _a6;
     const text7 = (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6.slice(-1)[0];
     node3.args = [{ type: "macro", content: "text", args: [text7] }];
     return "op";
   },
+  mathop: "op",
   "\\": (state, node3) => {
+    var _a6;
     node3.args = [];
-    if (state.data.inArray)
+    if (state.data.inArray) {
+      state.data.previousMatRows = ((_a6 = state.data.previousMatRows) !== null && _a6 !== void 0 ? _a6 : 0) + 1;
+      if (state._value.slice(-1) === "]")
+        state.addWhitespace();
       return ";";
+    }
+    return "\\\n";
+  },
+  cr: (state, node3) => {
+    var _a6;
+    node3.args = [];
+    if (state.data.inArray) {
+      state.data.previousMatRows = ((_a6 = state.data.previousMatRows) !== null && _a6 !== void 0 ? _a6 : 0) + 1;
+      if (state._value.slice(-1) === "]")
+        state.addWhitespace();
+      return ";";
+    }
     return "\\\n";
   },
   sim: "tilde",
@@ -307295,15 +307611,20 @@ var typstMacros = {
   simeq: "tilde.eq",
   ne: "!=",
   phi: "phi.alt",
+  varphi: "phi.alt",
   varepsilon: "epsilon",
   propto: "prop",
   doteq: "dot(eq)",
   ge: "gt.eq",
   geq: "gt.eq",
+  gg: "gt.double",
   le: "lt.eq",
   leq: "lt.eq",
+  ll: "lt.double",
   neq: "eq.not",
   otimes: "times.circle",
+  circ: "compose",
+  vert: "bar.v",
   dot: "dot",
   ddot: "dot.double",
   dots: "dots.h",
@@ -307315,6 +307636,7 @@ var typstMacros = {
   cap: "sect",
   cup: "union",
   widehat: "hat",
+  widetilde: "tilde",
   // Spaces
   ",": "thin",
   ":": "med",
@@ -307322,9 +307644,14 @@ var typstMacros = {
   "!": "#h(-1em)",
   quad: "quad",
   qquad: "wide",
+  wedge: "and",
   prod: "product",
-  biggl: "",
-  biggr: "",
+  lfloor: "floor.l",
+  rfloor: "floor.r",
+  langle: "angle.l",
+  rangle: "angle.r",
+  implies: "arrow.r.double.long",
+  " ": '" "',
   mathbb: (state, node3) => {
     var _a6, _b, _c, _d2, _e;
     const text7 = (_e = (_d2 = (_c = (_b = (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6.slice(-1)[0]) === null || _b === void 0 ? void 0 : _b.content) === null || _c === void 0 ? void 0 : _c[0]) === null || _d2 === void 0 ? void 0 : _d2.content) !== null && _e !== void 0 ? _e : "";
@@ -307347,16 +307674,62 @@ var typstMacros = {
     state.useMacro('#import "@preview/ouset:0.2.0": *');
     node3.args = (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6.reverse();
     return "underset";
+  },
+  overrightarrow: (state, node3) => {
+    var _a6;
+    (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6.push({ type: "argument", content: [{ type: "macro", content: "arrow" }] });
+    return "accent";
+  },
+  overleftarrow: (state, node3) => {
+    var _a6;
+    (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6.push({ type: "argument", content: [{ type: "macro", content: "arrow.l" }] });
+    return "accent";
+  },
+  middle: (state) => {
+    var _a6;
+    return `mat(delim: #("|", none), ${";".repeat((_a6 = state.data.previousMatRows) !== null && _a6 !== void 0 ? _a6 : 1)})`;
+  },
+  stackrel: (state, node3) => {
+    var _a6;
+    const args = (_a6 = node3.args) === null || _a6 === void 0 ? void 0 : _a6.reverse();
+    node3.args = [];
+    state.writeChildren(args === null || args === void 0 ? void 0 : args[0]);
+    state.write("^");
+    state.writeChildren(args === null || args === void 0 ? void 0 : args[1]);
+    return "";
+  },
+  color: (state, node3) => {
+    var _a6, _b, _c;
+    const [fill3, children] = (_a6 = node3.args) !== null && _a6 !== void 0 ? _a6 : [];
+    const color2 = (_c = (_b = fill3.content) === null || _b === void 0 ? void 0 : _b[0]) === null || _c === void 0 ? void 0 : _c.content;
+    node3.args = [];
+    state.openFunction(`#text(fill: ${color2})`, { openToken: "[$", closeToken: "$]" });
+    state.writeChildren(children);
+    state.closeFunction();
+    return "";
   }
 };
+var matrixEnv = (delim) => (state, node3) => {
+  state.data.inArray = true;
+  state.data.previousMatRows = 0;
+  state.openFunction("mat");
+  state.write(`delim: ${delim ? `"${delim}"` : "#none"},`);
+  state.writeChildren(node3);
+  state.closeFunction();
+  state.data.inArray = false;
+};
 var typstEnvs = {
-  array: (state, node3) => {
-    state.data.inArray = true;
-    state.openFunction("mat");
-    state.write("delim: #none,");
+  array: matrixEnv(),
+  matrix: matrixEnv(),
+  pmatrix: matrixEnv("("),
+  bmatrix: matrixEnv("["),
+  Bmatrix: matrixEnv("{"),
+  vmatrix: matrixEnv("|"),
+  aligned(state, node3) {
+    state.writeChildren(node3);
+  },
+  ["aligned*"](state, node3) {
     state.writeChildren(node3);
-    state.closeFunction();
-    state.data.inArray = false;
   }
 };
 
@@ -307368,11 +307741,26 @@ function parseLatex2(value) {
       boldsymbol: { signature: "m" },
       left: { signature: "m" },
       right: { signature: "m" },
+      big: { signature: "m" },
+      bigr: { signature: "m" },
+      bigl: { signature: "m" },
+      Big: { signature: "m" },
+      Bigr: { signature: "m" },
+      Bigl: { signature: "m" },
+      bigg: { signature: "m" },
+      biggr: { signature: "m" },
+      biggl: { signature: "m" },
+      Bigg: { signature: "m" },
+      Biggr: { signature: "m" },
+      Biggl: { signature: "m" },
       dot: { signature: "m" },
       ddot: { signature: "m" },
       hat: { signature: "m" },
       tilde: { signature: "m" },
+      check: { signature: "m" },
+      bar: { signature: "m" },
       widehat: { signature: "m" },
+      widetilde: { signature: "m" },
       overset: { signature: "m m" },
       underset: { signature: "m m" },
       overbrace: { signature: "m" },
@@ -307380,7 +307768,14 @@ function parseLatex2(value) {
       overparen: { signature: "m" },
       underbrace: { signature: "m" },
       underline: { signature: "m" },
-      underparen: { signature: "m" }
+      underparen: { signature: "m" },
+      overrightarrow: { signature: "m" },
+      overleftarrow: { signature: "m" },
+      stackrel: { signature: "m m" },
+      mathop: { signature: "m" },
+      bf: { signature: "m" },
+      textstyle: { signature: "m" }
+      // color: { signature: 'm m' }, // This doesn't work, changing it below manually
     }
   }).processSync({ value });
   const content3 = file.result.content;
@@ -307393,7 +307788,7 @@ function walkLatex2(node3) {
     const content3 = node3.content.map((n) => walkLatex2(n));
     let skip = 0;
     const parsed = content3.reduce((list6, next, i2, array) => {
-      var _a6;
+      var _a6, _b, _c, _d2, _e, _f, _g;
       if (skip > 0) {
         skip -= 1;
         return list6;
@@ -307404,12 +307799,39 @@ function walkLatex2(node3) {
         next.args = args;
         skip += nodesRemoved;
       }
+      if (next.type === "macro" && next.content === "color") {
+        const { args, nodesRemoved } = gobbleArguments(array.slice(i2 + 1), "m");
+        next.type = "macro";
+        next.args = [...(_b = (_a6 = next.args) === null || _a6 === void 0 ? void 0 : _a6.slice(1)) !== null && _b !== void 0 ? _b : [], ...args];
+        skip += nodesRemoved;
+      }
+      if (next.type === "macro" && next.content === "textstyle") {
+        next.content = "text";
+      }
       if (next.type === "macro" && (next.content === "overbrace" || next.content === "underbrace")) {
         const { args, nodesRemoved } = gobbleArguments(array.slice(i2 + 1), "m");
         if (args[0].content.length === 1 && args[0].content[0].type === "macro" && (args[0].content[0].content === "^" && next.content === "overbrace" || args[0].content[0].content === "_" && next.content === "underbrace")) {
-          next.args = [...(_a6 = next.args) !== null && _a6 !== void 0 ? _a6 : [], ...args[0].content[0].args];
+          next.args = [...(_c = next.args) !== null && _c !== void 0 ? _c : [], ...args[0].content[0].args];
           skip += nodesRemoved;
         }
+        if (args[0].content.length === 1 && args[0].content[0].type === "string" && (args[0].content[0].content === "^" && next.content === "overbrace" || args[0].content[0].content === "_" && next.content === "underbrace")) {
+          const { args: doubleArgs, nodesRemoved: doubleNodesRemoved } = gobbleArguments(array.slice(i2 + 1), "m m");
+          next.args = [...(_d2 = next.args) !== null && _d2 !== void 0 ? _d2 : [], doubleArgs[1]];
+          skip += doubleNodesRemoved;
+        }
+      }
+      if (next.type === "macro" && next.content === "middle" && ((_e = array[i2 + 1]) === null || _e === void 0 ? void 0 : _e.content) === "|") {
+        skip += 1;
+      }
+      if (next.type === "group" && ((_g = (_f = next.content) === null || _f === void 0 ? void 0 : _f.find) === null || _g === void 0 ? void 0 : _g.call(_f, (n) => n.type === "macro" && n.content === "over"))) {
+        const children = next.content;
+        next.type = "macro";
+        next.content = "frac";
+        const index4 = children.findIndex((n) => n.type === "macro" && n.content === "over");
+        next.args = [
+          { type: "argument", content: children.slice(0, index4) },
+          { type: "argument", content: children.slice(index4 + 1) }
+        ];
       }
       list6.push(next);
       return list6;
@@ -307425,12 +307847,13 @@ function walkLatex2(node3) {
   return node3;
 }
 var State4 = class {
-  constructor() {
+  constructor(opts) {
+    var _a6;
     this._scriptsSimplified = false;
     this._closeToken = [];
     this._currentFunctions = [];
     this._value = "";
-    this.data = {};
+    this.data = { writeOutBrackets: (_a6 = opts === null || opts === void 0 ? void 0 : opts.writeOutBrackets) !== null && _a6 !== void 0 ? _a6 : false };
   }
   get value() {
     return this._value;
@@ -307442,16 +307865,26 @@ var State4 = class {
   }
   addWhitespace() {
     const lastChar = this.value.slice(-1);
-    if (!this._value || lastChar.match(/^(["\s_^{(-])$/))
+    if (!this._value)
+      return;
+    if (lastChar.match(/^(["\s_^{(-])$/))
+      return;
+    const lastTwoChar = this.value.slice(-2);
+    if (!this._value || lastTwoChar === ")[" || lastTwoChar === "[$")
       return;
     this._value += " ";
   }
   write(str2) {
     if (!str2)
       return;
+    if (Object.keys(BRACKETS).includes(str2) && this.data.inFunction && this.data.writeOutBrackets) {
+      this.addWhitespace();
+      this._value += BRACKETS[str2];
+      return;
+    }
     if (this._scriptsSimplified && str2 === "(") {
       this.addWhitespace();
-    } else if (str2.match(/^([}()_^,;!])$/)) {
+    } else if (str2.match(/^([})_^.,;!])$/) || str2 === '\\"') {
     } else {
       this.addWhitespace();
     }
@@ -307472,7 +307905,7 @@ var State4 = class {
   get _functionCount() {
     return this._currentFunctions.length;
   }
-  openFunction(command) {
+  openFunction(command, { openToken, closeToken } = {}) {
     if (command === "text") {
       this.addWhitespace();
     } else {
@@ -307482,8 +307915,8 @@ var State4 = class {
     this.data.inFunction = true;
     this._simplify = command === "_" || command === "^";
     this._lastFunction = this._value.length;
-    this._value += command === "text" ? '"' : "(";
-    this._closeToken.push(command === "text" ? '"' : ")");
+    this._value += openToken !== null && openToken !== void 0 ? openToken : command === "text" ? '"' : "(";
+    this._closeToken.push(closeToken !== null && closeToken !== void 0 ? closeToken : command === "text" ? '"' : ")");
   }
   closeFunction() {
     this._value += this._closeToken.pop() || ")";
@@ -307560,11 +307993,15 @@ function writeTypst(node3, state = new State4()) {
 function postProcess(typst) {
   return typst.replace(/^(_|\^)/, '""$1').replace(/"([^"]*)"=/g, '"$1" =').replace(/(\d+)(?:\s+)(?=\d)/g, "$1");
 }
-function texToTypst(value) {
+function texToTypst(value, options) {
   const tree = parseLatex2(value);
   walkLatex2(tree);
-  const state = writeTypst(tree);
-  return { value: postProcess(state.value), macros: state.data.macros };
+  const state = writeTypst(tree, new State4({ writeOutBrackets: options === null || options === void 0 ? void 0 : options.writeOutBrackets }));
+  const typstValue = postProcess(state.value);
+  if ((options === null || options === void 0 ? void 0 : options.writeOutBrackets) || areBracketsBalanced(typstValue)) {
+    return { value: typstValue, macros: state.data.macros };
+  }
+  return texToTypst(value, { writeOutBrackets: true });
 }
 
 // ../myst-to-typst/dist/math.js
@@ -307613,7 +308050,7 @@ function resolveRecursiveCommands(plugins3) {
   return newPlugins;
 }
 var math5 = (node3, state) => {
-  var _a6;
+  var _a6, _b;
   const { value, macros: macros18 } = texToTypst(node3.value);
   macros18 === null || macros18 === void 0 ? void 0 : macros18.forEach((macro2) => {
     state.useMacro(macro2);
@@ -307621,6 +308058,13 @@ var math5 = (node3, state) => {
   const { identifier: label } = (_a6 = normalizeLabel(node3.label)) !== null && _a6 !== void 0 ? _a6 : {};
   addMacrosToState2(value, state);
   state.ensureNewLine();
+  if ((_b = node3.enumerator) === null || _b === void 0 ? void 0 : _b.endsWith(".1")) {
+    state.write(`#set math.equation(numbering: "(${node3.enumerator})")
+`);
+    state.write(`#counter(math.equation).update(0)
+
+`);
+  }
   state.write(`$ ${value} $${label ? ` <${label}>` : ""}
 
 `);
@@ -307696,7 +308140,9 @@ var tableCellHandler = (node3, state) => {
       state.write(`align: ${node3.align}, `);
     }
     if ((_b = node3.style) === null || _b === void 0 ? void 0 : _b.backgroundColor) {
-      state.write(`fill: rgb("${node3.style.backgroundColor}"), `);
+      const fill3 = node3.style.backgroundColor;
+      const rgb = fill3.startsWith("#");
+      state.write(`fill: ${rgb ? `rgb("${fill3}")` : fill3}, `);
     }
     state.write(")");
   }
@@ -307705,6 +308151,54 @@ var tableCellHandler = (node3, state) => {
   state.write("],\n");
 };
 
+// ../myst-to-typst/dist/proofs.js
+var proof = `
+#let proof(body, heading: [], kind: "proof", supplement: "Proof", labelName: none, color: blue, float: true) = {
+  let stroke = 1pt + color.lighten(90%)
+  let fill = color.lighten(90%)
+  let title
+  set figure.caption(position: top)
+  set figure(placement: none)
+  show figure.caption.where(body: heading): (it) => {
+    block(width: 100%, stroke: stroke, fill: fill, inset: 8pt, it)
+  }
+  place(auto, float: float, block(width: 100%, [
+    #figure(kind: kind, supplement: supplement, gap: 0pt, [
+      #set align(left);
+      #set figure.caption(position: bottom)
+      #block(width: 100%, fill: luma(253), stroke: stroke, inset: 8pt)[#body]
+    ], caption: heading)
+    #if(labelName != none){label(labelName)}
+  ]))
+}`;
+function writeProof(node3, state, kind) {
+  state.useMacro(proof);
+  const title = select("admonitionTitle", node3);
+  const supplement = getDefaultCaptionSupplement(kind);
+  state.write(`#proof(kind: "${kind}", supplement: "${supplement}", labelName: ${node3.identifier ? `"${node3.identifier}"` : "none"}`);
+  if (title) {
+    state.write(", heading: [");
+    state.renderChildren(title);
+    state.write("])[\n");
+  } else {
+    state.write(")[\n");
+  }
+  state.renderChildren(node3);
+  state.write("]");
+  state.ensureNewLine();
+}
+var proofHandlers = {
+  proof(node3, state) {
+    writeProof(node3, state, node3.kind || "proof");
+  },
+  exercise(node3, state) {
+    writeProof(node3, state, "exercise");
+  },
+  solution(node3, state) {
+    writeProof(node3, state, "solution");
+  }
+};
+
 // ../myst-to-typst/dist/index.js
 var admonition2 = `#let admonition(body, heading: none, color: blue) = {
   let stroke = (left: 2pt + color.darken(20%))
@@ -307745,25 +308239,6 @@ var tabItem = `
     #block(width: 100%, inset: (x: 8pt, bottom: 8pt))[#body]
   ])
 }`;
-var proof = `
-#let proof(body, heading: [], kind: "proof", supplement: "Proof", labelName: none, color: blue, float: true) = {
-  let stroke = 1pt + color.lighten(90%)
-  let fill = color.lighten(90%)
-  let title
-  set figure.caption(position: top)
-  set figure(placement: none)
-  show figure.caption.where(body: heading): (it) => {
-    block(width: 100%, stroke: stroke, fill: fill, inset: 8pt, it)
-  }
-  place(auto, float: float, block(width: 100%, [
-    #figure(kind: kind, supplement: supplement, gap: 0pt, [
-      #set align(left);
-      #set figure.caption(position: bottom)
-      #block(width: 100%, fill: luma(253), stroke: stroke, inset: 8pt)[#body]
-    ], caption: heading)
-    #if(labelName != none){label(labelName)}
-  ]))
-}`;
 var INDENT = "  ";
 var linkHandler = (node3, state) => {
   const href = node3.url;
@@ -307776,6 +308251,16 @@ var linkHandler = (node3, state) => {
     state.write("]");
   }
 };
+function prevCharacterIsText(parent2, node3) {
+  var _a6, _b;
+  const ind = (_a6 = parent2 === null || parent2 === void 0 ? void 0 : parent2.children) === null || _a6 === void 0 ? void 0 : _a6.findIndex((n) => n === node3);
+  if (!ind)
+    return false;
+  const prev = (_b = parent2 === null || parent2 === void 0 ? void 0 : parent2.children) === null || _b === void 0 ? void 0 : _b[ind - 1];
+  if (!(prev === null || prev === void 0 ? void 0 : prev.value))
+    return false;
+  return (prev === null || prev === void 0 ? void 0 : prev.type) === "text" && !!prev.value.match(/[a-zA-Z0-9\-_]$/) || false;
+}
 function nextCharacterIsText(parent2, node3) {
   var _a6, _b;
   const ind = (_a6 = parent2 === null || parent2 === void 0 ? void 0 : parent2.children) === null || _a6 === void 0 ? void 0 : _a6.findIndex((n) => n === node3);
@@ -307788,16 +308273,18 @@ function nextCharacterIsText(parent2, node3) {
 }
 var handlers4 = {
   text(node3, state) {
-    state.text(node3.value);
+    state.text(node3.value.replaceAll("\n", " "));
   },
   paragraph(node3, state) {
-    state.renderChildren(node3, 2);
+    const { identifier } = node3;
+    const after = identifier ? ` <${identifier}>` : void 0;
+    state.renderChildren(node3, 2, { after });
   },
   heading(node3, state) {
-    const { depth, identifier, enumerated } = node3;
+    const { depth, identifier, enumerated, implicit } = node3;
     state.write(`${Array(depth).fill("=").join("")} `);
     state.renderChildren(node3);
-    if (enumerated !== false && identifier) {
+    if (enumerated !== false && identifier && !implicit) {
       state.write(` <${identifier}>`);
     }
     state.write("\n\n");
@@ -307808,7 +308295,7 @@ var handlers4 = {
       return;
     if (metadataTags.includes("no-pdf"))
       return;
-    if (node3.visibility === "remove")
+    if (node3.visibility === "remove" || node3.visibility === "hide")
       return;
     if (metadataTags.includes("page-break") || metadataTags.includes("new-page")) {
       state.write("#pagebreak(weak: true)\n");
@@ -307850,9 +308337,8 @@ var handlers4 = {
   },
   code(node3, state) {
     var _a6;
-    if (node3.visibility === "remove") {
+    if (node3.visibility === "remove" || node3.visibility === "hide")
       return;
-    }
     let ticks = "```";
     while (node3.value.includes(ticks)) {
       ticks += "`";
@@ -307917,8 +308403,9 @@ ${node3.value}
     }
   },
   strong(node3, state, parent2) {
+    const prev = prevCharacterIsText(parent2, node3);
     const next = nextCharacterIsText(parent2, node3);
-    if (nodeOnlyHasTextChildren(node3) && !next) {
+    if (nodeOnlyHasTextChildren(node3) && !(prev || next)) {
       state.write("*");
       state.renderChildren(node3);
       state.write("*");
@@ -307927,8 +308414,9 @@ ${node3.value}
     }
   },
   emphasis(node3, state, parent2) {
+    const prev = prevCharacterIsText(parent2, node3);
     const next = nextCharacterIsText(parent2, node3);
-    if (nodeOnlyHasTextChildren(node3) && !next) {
+    if (nodeOnlyHasTextChildren(node3) && !prev && !next) {
       state.write("_");
       state.renderChildren(node3);
       state.write("_");
@@ -308038,9 +308526,9 @@ ${node3.value}
   legend: captionHandler2,
   captionNumber: () => void 0,
   crossReference(node3, state, parent2) {
-    var _a6, _b;
-    if (node3.remote) {
-      const url = ((_a6 = node3.remoteBaseUrl) !== null && _a6 !== void 0 ? _a6 : "") + (node3.url === "/" ? "" : (_b = node3.url) !== null && _b !== void 0 ? _b : "") + (node3.html_id ? `#${node3.html_id}` : "");
+    var _a6;
+    if (node3.remoteBaseUrl) {
+      const url = node3.remoteBaseUrl + (node3.url === "/" ? "" : (_a6 = node3.url) !== null && _a6 !== void 0 ? _a6 : "") + (node3.html_id ? `#${node3.html_id}` : "");
       linkHandler({ ...node3, url }, state);
       return;
     }
@@ -308129,23 +308617,6 @@ ${node3.value}
     state.renderChildren(node3);
     state.write("\n]\n\n");
   },
-  proof(node3, state) {
-    state.useMacro(proof);
-    const title = select("admonitionTitle", node3);
-    const kind = node3.kind || "proof";
-    const supplement = getDefaultCaptionSupplement(kind);
-    state.write(`#proof(kind: "${kind}", supplement: "${supplement}", labelName: ${node3.identifier ? `"${node3.identifier}"` : "none"}`);
-    if (title) {
-      state.write(", heading: [");
-      state.renderChildren(title);
-      state.write("])[");
-    } else {
-      state.write(")[");
-    }
-    state.renderChildren(node3);
-    state.write("]");
-    state.ensureNewLine();
-  },
   card(node3, state) {
     var _a6;
     if (node3.url) {
@@ -308167,7 +308638,8 @@ ${node3.value}
   },
   footer() {
     return;
-  }
+  },
+  ...proofHandlers
 };
 var TypstSerializer = class {
   constructor(file, tree, opts) {
@@ -308218,7 +308690,7 @@ var TypstSerializer = class {
       this.renderChildren({ children: node3 }, trailingNewLines, opts);
       return;
     }
-    const { delim = "", trimEnd: trimEnd2 = true } = opts;
+    const { delim = "", trimEnd: trimEnd2 = true, after } = opts;
     const numChildren = (_b = (_a6 = node3.children) === null || _a6 === void 0 ? void 0 : _a6.length) !== null && _b !== void 0 ? _b : 0;
     (_c = node3.children) === null || _c === void 0 ? void 0 : _c.forEach((child, index4) => {
       if (!child)
@@ -308237,6 +308709,8 @@ var TypstSerializer = class {
     });
     if (trimEnd2)
       this.trimEnd();
+    if (after)
+      this.write(after);
     for (let i2 = trailingNewLines; i2--; )
       this.addNewLine();
   }
@@ -308281,7 +308755,7 @@ var TYPST_IMAGE_EXTENSIONS = [
   ImageExtensions.jpeg
 ];
 function isTypstAvailable() {
-  return import_which5.default.sync("typst", { nothrow: true });
+  return import_which6.default.sync("typst", { nothrow: true });
 }
 async function runTypstExecutable(session, typstFile) {
   if (!isTypstAvailable()) {
@@ -308443,6 +308917,23 @@ async function localArticleToTypstTemplated(session, file, templateOptions, opts
     macros: [],
     commands: {}
   };
+  const state = session.store.getState();
+  const projectFrontmatter = (_a6 = selectors_exports.selectLocalProjectConfig(state, projectPath !== null && projectPath !== void 0 ? projectPath : ".")) !== null && _a6 !== void 0 ? _a6 : {};
+  if (file === selectors_exports.selectCurrentProjectFile(state)) {
+    partDefinitions.forEach((def) => {
+      var _a7;
+      const part = extractTypstPart(session, { type: "root", children: [] }, {}, def, projectFrontmatter, templateYml);
+      if (Array.isArray(part)) {
+        part.forEach((item) => {
+          collected = mergeTypstTemplateImports(collected, item);
+        });
+        parts[def.id] = part.map(({ value }) => value);
+      } else if (part != null) {
+        collected = mergeTypstTemplateImports(collected, part);
+        parts[def.id] = (_a7 = part === null || part === void 0 ? void 0 : part.value) !== null && _a7 !== void 0 ? _a7 : "";
+      }
+    });
+  }
   const hasGlossaries = false;
   const results = await Promise.all(content3.map(async ({ mdast: mdast2, frontmatter: frontmatter2, references }, ind) => {
     await finalizeMdast(session, mdast2, frontmatter2, fileArticles[ind].file, {
@@ -308479,8 +308970,7 @@ async function localArticleToTypstTemplated(session, file, templateOptions, opts
     frontmatter = content3[0].frontmatter;
     typstContent = results[0].value;
   } else {
-    const state = session.store.getState();
-    frontmatter = (_a6 = selectors_exports.selectLocalProjectConfig(state, projectPath !== null && projectPath !== void 0 ? projectPath : ".")) !== null && _a6 !== void 0 ? _a6 : {};
+    frontmatter = projectFrontmatter;
     const { dir, name: name3, ext: ext2 } = import_node_path46.default.parse(output2);
     typstContent = "";
     let fileInd = 0;
@@ -308709,7 +309199,7 @@ var paragraph2 = (state, node3) => {
   state.closeBlock();
 };
 var block3 = (state, node3) => {
-  if (node3.visibility === "remove")
+  if (node3.visibility === "remove" || node3.visibility === "hide")
     return;
   const metadataTags = getMetadataTags(node3);
   if (metadataTags.includes("page-break") || metadataTags.includes("new-page")) {
@@ -311117,7 +311607,7 @@ var handlers5 = {
     state.renderInline(node3, "title");
   },
   block(node3, state) {
-    if (node3.visibility === "remove")
+    if (node3.visibility === "remove" || node3.visibility === "hide")
       return;
     state.renderChildren(node3);
   },
@@ -311919,12 +312409,12 @@ var import_node_path49 = __toESM(require("path"), 1);
 var import_util5 = __toESM(require("util"), 1);
 
 // ../myst-cli/dist/build/pdf/utils.js
-var import_which6 = __toESM(require_lib15(), 1);
+var import_which7 = __toESM(require_lib15(), 1);
 function isLatexmkAvailable() {
-  return import_which6.default.sync("latexmk", { nothrow: true });
+  return import_which7.default.sync("latexmk", { nothrow: true });
 }
 function isMakeglossariesAvailable() {
-  return import_which6.default.sync("makeglossaries", { nothrow: true });
+  return import_which7.default.sync("makeglossaries", { nothrow: true });
 }
 
 // ../myst-cli/dist/build/pdf/create.js
@@ -316326,7 +316816,7 @@ var CODE_BLOCK_KEYS = [
   "caption"
 ];
 function code6(node3, _3, state, info) {
-  const nodeCodeBlockKeys = Object.keys(node3).filter((k) => CODE_BLOCK_KEYS.includes(k));
+  const nodeCodeBlockKeys = Object.entries(node3).filter(([k, v]) => CODE_BLOCK_KEYS.includes(k) && v != null);
   if (!nodeCodeBlockKeys.length) {
     return handle5.code(node3, _3, state, info);
   }
@@ -316348,6 +316838,10 @@ function code6(node3, _3, state, info) {
 var IMAGE_DIRECTIVE_OPTS = ["class", "width", "align"];
 var IMAGE_OPTS = IMAGE_DIRECTIVE_OPTS.concat("title", "alt");
 function image5(node3, _3, state, info) {
+  var _a6;
+  if ((_a6 = node3 === null || node3 === void 0 ? void 0 : node3.data) === null || _a6 === void 0 ? void 0 : _a6.altTextIsAutoGenerated) {
+    delete node3.alt;
+  }
   const nodeImageDirectiveKeys = Object.keys(node3).filter((k) => IMAGE_DIRECTIVE_OPTS.includes(k));
   if (!nodeImageDirectiveKeys.length)
     return handle5.image(node3, void 0, state, info);
@@ -316403,15 +316897,18 @@ function containerValidator(node3, file) {
 var FIGURE_OPTS = ["label", "class", "width", "align", "title", "alt", "placeholder"];
 var TABLE_KEYS = ["headerRows", "label", "class", "width", "align"];
 function container3(node3, _3, state, info) {
-  var _a6, _b, _c;
+  var _a6, _b, _c, _d2;
   const captionNode = select("caption", node3);
   const legendNode = select("legend", node3);
   const children = [...(captionNode === null || captionNode === void 0 ? void 0 : captionNode.children) || [], ...(legendNode === null || legendNode === void 0 ? void 0 : legendNode.children) || []];
   if (node3.kind === "figure") {
     const imageNodes = selectAll("image", node3);
     const imageNode = imageNodes.find((img2) => !img2.placeholder);
+    if ((_a6 = imageNode === null || imageNode === void 0 ? void 0 : imageNode.data) === null || _a6 === void 0 ? void 0 : _a6.altTextIsAutoGenerated) {
+      delete imageNode.alt;
+    }
     const placeholderNode = imageNodes.find((img2) => img2.placeholder);
-    const url = (_b = (_a6 = imageNode === null || imageNode === void 0 ? void 0 : imageNode.urlSource) !== null && _a6 !== void 0 ? _a6 : imageNode === null || imageNode === void 0 ? void 0 : imageNode.url) !== null && _b !== void 0 ? _b : `#${node3.source.label}`;
+    const url = (_c = (_b = imageNode === null || imageNode === void 0 ? void 0 : imageNode.urlSource) !== null && _b !== void 0 ? _b : imageNode === null || imageNode === void 0 ? void 0 : imageNode.url) !== null && _c !== void 0 ? _c : `#${node3.source.label}`;
     if (!url)
       return "";
     const combinedNode = { type: "container", url, children };
@@ -316422,7 +316919,7 @@ function container3(node3, _3, state, info) {
         combinedNode[key2] = val;
     });
     if (placeholderNode) {
-      combinedNode["placeholder"] = (_c = placeholderNode.urlSource) !== null && _c !== void 0 ? _c : placeholderNode.url;
+      combinedNode["placeholder"] = (_d2 = placeholderNode.urlSource) !== null && _d2 !== void 0 ? _d2 : placeholderNode.url;
     }
     const options = {
       argsKey: "url",
@@ -316567,12 +317064,32 @@ function tabItem2(node3, _3, state, info) {
   const handler = writeFlowDirective("tab-item", node3.title, { keys: ["sync", "selected"] });
   return handler(node3, _3, state, info);
 }
+function iframe3(node3, _3, state, info) {
+  const handler = writeStaticDirective("iframe", { argsKey: "src", keys: IMAGE_DIRECTIVE_OPTS });
+  return handler(node3, _3, state, info);
+}
+function aside(node3, _3, state, info) {
+  var _a6;
+  const name3 = (_a6 = node3.kind) !== null && _a6 !== void 0 ? _a6 : "aside";
+  const admonitionTitle3 = select("admonitionTitle", node3);
+  const args = admonitionTitle3 ? state.containerPhrasing(admonitionTitle3, info) : "";
+  const nodeCopy = {
+    ...node3,
+    children: node3.children.filter((n) => n.type !== "admonitionTitle")
+  };
+  const options = {
+    keys: ["class"]
+  };
+  return writeFlowDirective(name3, args, options)(nodeCopy, _3, state, info);
+}
 var directiveHandlers2 = {
   code: code6,
   image: image5,
   container: container3,
   admonition: admonition4,
   details: details2,
+  iframe: iframe3,
+  aside,
   card,
   grid: writeFlowDirective("grid", void 0, {
     keys: ["columns"],
@@ -316599,7 +317116,7 @@ function comment6(node3, _3, state) {
   });
 }
 function block4(node3, _3, state, info) {
-  if (node3.visibility === "remove")
+  if (node3.visibility === "remove" || node3.visibility === "hide")
     return "";
   const meta2 = node3.meta ? ` ${node3.meta}` : "";
   const content3 = state.containerFlow(node3, info);
@@ -316653,7 +317170,7 @@ function labelWrapper(handler) {
     const ident = (_a6 = node3.identifier) !== null && _a6 !== void 0 ? _a6 : node3.label;
     const prefix2 = ident ? `(${ident})=
 ` : "";
-    return `${prefix2}${handler(node3, _3, state, info)}`;
+    return `${node3.implicit ? "" : prefix2}${handler(node3, _3, state, info)}`;
   };
 }
 function crossReference3(node3, _3, state, info) {
@@ -316955,7 +317472,7 @@ function frontmatterToCFF(frontmatter, abstract) {
   let dateString;
   if (frontmatter.date) {
     const date = new Date(frontmatter.date);
-    dateString = new Date(date.getTime() - date.getTimezoneOffset() * 60 * 1e3).toISOString().split("T")[0];
+    dateString = new Date(date.getTime()).toISOString().split("T")[0];
   }
   const { title, authors } = frontmatter;
   if (!title) {
@@ -317614,6 +318131,8 @@ async function startServer(session, opts) {
 }
 
 // ../myst-cli/dist/build/html/index.js
+var import_p_limit2 = __toESM(require_p_limit(), 1);
+var limitConnections = (0, import_p_limit2.default)(5);
 async function currentSiteRoutes(session, host, baseurl, opts) {
   var _a6, _b;
   const manifest = await getSiteManifest(session, opts);
@@ -317703,8 +318222,8 @@ async function buildHtml(session, opts) {
     return;
   const host = `http://localhost:${appServer.port}`;
   const routes = await currentSiteRoutes(session, host, baseurl, opts);
-  await Promise.all(routes.map(async (route) => {
-    const resp = await session.fetch(route.url);
+  await Promise.all(routes.map(async (route) => limitConnections(async () => {
+    const resp = await fetchWithRetry(session, route.url);
     if (!resp.ok) {
       session.log.error(`Error fetching ${route.url}`);
       return;
@@ -317722,7 +318241,7 @@ async function buildHtml(session, opts) {
       const content3 = await resp.text();
       writeFileToFolder(import_node_path57.default.join(htmlDir, route.path), content3);
     }
-  }));
+  })));
   appServer.stop();
   const templateBuildDir = import_node_path57.default.join(template.templatePath, "public");
   import_fs_extra.default.copySync(templateBuildDir, htmlDir);
@@ -320498,6 +321017,7 @@ async function checkAtGitRoot() {
 // ../myst-cli/dist/init/gh-actions/index.js
 function createGithubPagesAction({ defaultBranch = "main", username = "username", isGithubIO }) {
   return `# This file was created automatically with \`myst init --gh-pages\` \u{1FA84} \u{1F49A}
+# Ensure your GitHub Pages settings for this repository are set to deploy with **GitHub Actions**.
 
 name: MyST GitHub Pages Deploy
 on:
@@ -332228,7 +332748,7 @@ function boxen(text7, options) {
 
 // ../myst-cli/dist/session/session.js
 var import_https_proxy_agent = __toESM(require_dist5(), 1);
-var import_p_limit2 = __toESM(require_p_limit(), 1);
+var import_p_limit3 = __toESM(require_p_limit(), 1);
 var import_services = __toESM(require_lib27(), 1);
 if (!globalThis.fetch) {
   globalThis.fetch = fetch2;
@@ -332241,13 +332761,23 @@ var API_URL = "https://api.mystmd.org";
 var NPM_COMMAND = "npm i -g mystmd@latest";
 var PIP_COMMAND = "pip install -U mystmd";
 var LOCALHOSTS = ["localhost", "127.0.0.1", "::1"];
-function logUpdateAvailable({ current: current2, latest: latest2, upgradeCommand, twitter }) {
+function socialLink({ twitter, bsky }) {
+  if (bsky) {
+    return `Follow ${source_default.yellowBright(`@${bsky}`)} for updates!
+https://bsky.app/profile/${bsky}`;
+  }
+  if (twitter) {
+    return `Follow ${source_default.yellowBright(`@${twitter}`)} for updates!
+https://x.com/${twitter}`;
+  }
+  return "";
+}
+function logUpdateAvailable({ current: current2, latest: latest2, upgradeCommand, twitter, bsky }) {
   return boxen(`Update available! ${source_default.dim(`v${current2}`)} \u226B ${source_default.green.bold(`v${latest2}`)}
 
 Run \`${source_default.cyanBright.bold(upgradeCommand)}\` to update.
 
-Follow ${source_default.yellowBright(`@${twitter}`)} for updates!
-https://twitter.com/${twitter}`, {
+${socialLink({ bsky, twitter })}`, {
     padding: 1,
     margin: 1,
     borderColor: "green",
@@ -332266,7 +332796,7 @@ var Session = class {
     this.API_URL = API_URL;
     this.configFiles = CONFIG_FILES;
     this.$logger = (_a6 = opts.logger) !== null && _a6 !== void 0 ? _a6 : chalkLogger(LogLevel.info, process.cwd());
-    this.doiLimiter = (_b = opts.doiLimiter) !== null && _b !== void 0 ? _b : (0, import_p_limit2.default)(3);
+    this.doiLimiter = (_b = opts.doiLimiter) !== null && _b !== void 0 ? _b : (0, import_p_limit3.default)(3);
     const proxyUrl = process.env.HTTPS_PROXY;
     if (proxyUrl)
       this.proxyAgent = new import_https_proxy_agent.HttpsProxyAgent(proxyUrl);
@@ -332282,7 +332812,7 @@ var Session = class {
       current: version_default2,
       latest: this._latestVersion,
       upgradeCommand: process.env.MYST_LANG === "PYTHON" ? PIP_COMMAND : NPM_COMMAND,
-      twitter: "MystMarkdown"
+      bsky: "mystmd.org"
     }));
     this._shownUpgrade = true;
   }
@@ -332377,14 +332907,8 @@ var Session = class {
           token: process.env.JUPYTER_TOKEN
         };
       } else {
-        const existing = await findExistingJupyterServer(this);
-        if (existing) {
-          this.log.debug(`Found existing server on: ${existing.appUrl}`);
-          partialServerSettings = existing;
-        } else {
-          this.log.debug(`Launching jupyter server on ${this.sourcePath()}`);
-          partialServerSettings = await launchJupyterServer(this.sourcePath(), this.log);
-        }
+        this.log.debug(`Launching jupyter server on ${this.sourcePath()}`);
+        partialServerSettings = await launchJupyterServer(this.sourcePath(), this.log);
       }
       const serverSettings = import_services.ServerConnection.makeSettings(partialServerSettings);
       const kernelManager = new import_services.KernelManager({ serverSettings });