mystmd 1.1.36__py3-none-any.whl → 1.1.37__py3-none-any.whl

{mystmd-1.1.36.dist-info → mystmd-1.1.37.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: mystmd
-Version: 1.1.36
+Version: 1.1.37
 Summary: Command line tools for MyST Markdown
 Home-page: https://github.com/executablebooks/mystmd
 Author: Franklin Koch

mystmd-1.1.37.dist-info/RECORD

@@ -0,0 +1,9 @@
+mystmd_py/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
+mystmd_py/main.py,sha256=_dRwNvYQ3xult25BmsZgXMWe1asD_wuSW8JeWV-S3c0,1411
+mystmd_py/myst.cjs,sha256=-RtQzP98jUGZY-VuxlsgtSnXLxGb2sC1-LfGOPT1fPU,13218580
+mystmd-1.1.37.dist-info/LICENSE,sha256=vgXlcTOVbxYpGiMuE9NqgguIBXAH0hJAktlaxiyZ2wg,1088
+mystmd-1.1.37.dist-info/METADATA,sha256=j5YUSLWWqZogUNpMKCi0JWUGIrmITzXdZSG4gHzwuGU,2601
+mystmd-1.1.37.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
+mystmd-1.1.37.dist-info/entry_points.txt,sha256=eC2ol2gqS2q5E-ktkMrBSvV0tckGUcNGS-c4hEQ-_V4,45
+mystmd-1.1.37.dist-info/top_level.txt,sha256=__Xz3ZzAj4SsfBUP5OFexvriJM7gBwu8L2r3TL6UXKE,10
+mystmd-1.1.37.dist-info/RECORD,,

mystmd_py/myst.cjs

@@ -145290,7 +145290,7 @@ var require_node_loaders = __commonJS({
     var Loader = require_loader();
     var _require = require_precompiled_loader();
     var PrecompiledLoader = _require.PrecompiledLoader;
-    var chokidar2;
+    var chokidar3;
     var FileSystemLoader = /* @__PURE__ */ function(_Loader) {
       _inheritsLoose(FileSystemLoader2, _Loader);
       function FileSystemLoader2(searchPaths, opts) {
@@ -145310,12 +145310,12 @@ var require_node_loaders = __commonJS({
         }
         if (opts.watch) {
           try {
-            chokidar2 = require_chokidar();
+            chokidar3 = require_chokidar();
           } catch (e2) {
             throw new Error("watch requires chokidar to be installed");
           }
           var paths = _this.searchPaths.filter(fs42.existsSync);
-          var watcher = chokidar2.watch(paths);
+          var watcher = chokidar3.watch(paths);
           watcher.on("all", function(event, fullname) {
             fullname = path39.resolve(fullname);
             if (event === "change" && fullname in _this.pathsToNames) {
@@ -145364,11 +145364,11 @@ var require_node_loaders = __commonJS({
         _this2.noCache = !!opts.noCache;
         if (opts.watch) {
           try {
-            chokidar2 = require_chokidar();
+            chokidar3 = require_chokidar();
           } catch (e2) {
             throw new Error("watch requires chokidar to be installed");
           }
-          _this2.watcher = chokidar2.watch();
+          _this2.watcher = chokidar3.watch();
           _this2.watcher.on("change", function(fullname) {
             _this2.emit("update", _this2.pathsToNames[fullname], fullname);
           });
@@ -199098,7 +199098,7 @@ var {
 } = import_index.default;
 
 // src/version.ts
-var version = "1.1.36";
+var version = "1.1.37";
 var version_default = version;
 
 // ../myst-cli/dist/build/build.js
@@ -200635,13 +200635,26 @@ var ExportFormats;
 
 // ../myst-frontmatter/dist/exports/validators.js
 var EXPORT_KEY_OBJECT = {
-  required: ["format"],
-  optional: ["template", "output", "id", "name", "renderer", "articles", "sub_articles"],
+  required: [],
+  optional: ["format", "template", "output", "id", "name", "renderer", "articles", "sub_articles"],
   alias: {
     article: "articles",
     sub_article: "sub_articles"
   }
 };
+var EXT_TO_FORMAT = {
+  ".pdf": ExportFormats.pdf,
+  ".tex": ExportFormats.tex,
+  ".doc": ExportFormats.docx,
+  ".docx": ExportFormats.docx,
+  ".md": ExportFormats.md,
+  ".zip": ExportFormats.meca,
+  ".meca": ExportFormats.meca,
+  ".xml": ExportFormats.xml,
+  ".jats": ExportFormats.xml,
+  ".typ": ExportFormats.typst,
+  ".typst": ExportFormats.typst
+};
 var RESERVED_EXPORT_KEYS = [
   ...EXPORT_KEY_OBJECT.required,
   ...EXPORT_KEY_OBJECT.optional,
@@ -200669,10 +200682,26 @@ function validateExportFormat(input3, opts) {
 }
 function validateExport(input3, opts) {
   if (typeof input3 === "string") {
-    const format2 = validateExportFormat(input3, opts);
-    if (!format2)
-      return void 0;
-    input3 = { format: format2 };
+    let format2;
+    let output3;
+    if (input3.includes(".")) {
+      Object.entries(EXT_TO_FORMAT).forEach(([ext2, fmt]) => {
+        if (input3 === ext2) {
+          format2 = fmt;
+        } else if (input3.endsWith(ext2)) {
+          output3 = input3;
+        }
+      });
+      if (!format2 && !output3) {
+        output3 = input3;
+      }
+    }
+    if (!format2 && !output3) {
+      format2 = validateExportFormat(input3, opts);
+      if (!format2)
+        return void 0;
+    }
+    input3 = { format: format2, output: output3 };
   }
   const value = validateObjectKeys(input3, EXPORT_KEY_OBJECT, {
     ...opts,
@@ -200681,42 +200710,59 @@ function validateExport(input3, opts) {
   });
   if (value === void 0)
     return void 0;
-  const format = validateExportFormat(value.format, incrementOptions("format", opts));
-  if (format === void 0)
-    return void 0;
-  const output2 = { ...value, format };
+  let format;
+  let output2;
+  let template;
   if (value.template === null) {
-    output2.template = null;
+    template = null;
   } else if (defined(value.template)) {
-    output2.template = validateString(value.template, incrementOptions("template", opts));
+    template = validateString(value.template, incrementOptions("template", opts));
   }
   if (defined(value.output)) {
-    output2.output = validateString(value.output, incrementOptions("output", opts));
+    output2 = validateString(value.output, incrementOptions("output", opts));
   }
+  if (defined(value.format)) {
+    format = validateExportFormat(value.format, incrementOptions("format", opts));
+    if (!format)
+      return void 0;
+  } else if (output2) {
+    Object.entries(EXT_TO_FORMAT).forEach(([ext2, fmt]) => {
+      if (output2 === null || output2 === void 0 ? void 0 : output2.endsWith(ext2))
+        format = fmt;
+    });
+    if (!format) {
+      return validationError(`unable to infer export format from export: ${output2}`, opts);
+    }
+  } else {
+    return validationError("unable to determine export format", opts);
+  }
+  if (format === void 0 && template === void 0)
+    return void 0;
+  const validExport = { ...value, format, output: output2, template };
   if (defined(value.articles)) {
     const articles = validateList(value.articles, { coerce: true, ...incrementOptions("articles", opts) }, (item, ind) => validateString(item, incrementOptions(`articles.${ind}`, opts)));
-    if ((articles === null || articles === void 0 ? void 0 : articles.length) && articles.length > 1 && ![ExportFormats.pdf, ExportFormats.tex, ExportFormats.pdftex].includes(output2.format)) {
-      if (output2.format === ExportFormats.xml && !defined(value.sub_articles)) {
+    if ((articles === null || articles === void 0 ? void 0 : articles.length) && articles.length > 1 && validExport.format && ![ExportFormats.pdf, ExportFormats.tex, ExportFormats.pdftex].includes(validExport.format)) {
+      if (validExport.format === ExportFormats.xml && !defined(value.sub_articles)) {
         validationError("multiple articles are not supported for 'jats' export - instead specify one article with additional sub_articles", opts);
       } else {
         validationError("multiple articles are only supported for 'tex' and 'pdf' exports", opts);
       }
-      output2.articles = [articles[0]];
+      validExport.articles = [articles[0]];
     } else {
-      output2.articles = articles;
+      validExport.articles = articles;
     }
   }
   if (defined(value.sub_articles)) {
-    if (output2.format !== ExportFormats.xml) {
+    if (validExport.format !== ExportFormats.xml) {
       validationError("sub_articles are only supported for 'jats' export", opts);
-      output2.sub_articles = void 0;
+      validExport.sub_articles = void 0;
     } else {
-      output2.sub_articles = validateList(value.sub_articles, { coerce: true, ...incrementOptions("sub_articles", opts) }, (file, ind) => {
+      validExport.sub_articles = validateList(value.sub_articles, { coerce: true, ...incrementOptions("sub_articles", opts) }, (file, ind) => {
         return validateString(file, incrementOptions(`sub_articles.${ind}`, opts));
       });
     }
   }
-  return output2;
+  return validExport;
 }
 
 // ../myst-frontmatter/dist/funding/validators.js
@@ -240762,6 +240808,8 @@ function blockToFigureTransform(mdast2, opts) {
 function codeTransform(mdast2, file, opts) {
   const code7 = selectAll("code", mdast2);
   code7.forEach((node3) => {
+    if (node3.lang === "")
+      return;
     if (!node3.lang) {
       if (!(opts === null || opts === void 0 ? void 0 : opts.lang)) {
         fileWarn(file, "Language is not defined for code block", {
@@ -242235,12 +242283,15 @@ function getFrontmatter(file, tree, opts = { removeYaml: true, removeHeading: tr
 var selectors_exports = {};
 __export(selectors_exports, {
   selectAffiliation: () => selectAffiliation,
+  selectAllDependencies: () => selectAllDependencies,
   selectCurrentProjectConfig: () => selectCurrentProjectConfig,
   selectCurrentProjectFile: () => selectCurrentProjectFile,
   selectCurrentProjectPath: () => selectCurrentProjectPath,
   selectCurrentSiteConfig: () => selectCurrentSiteConfig,
   selectCurrentSiteFile: () => selectCurrentSiteFile,
   selectCurrentSitePath: () => selectCurrentSitePath,
+  selectDependentFiles: () => selectDependentFiles,
+  selectFileDependencies: () => selectFileDependencies,
   selectFileInfo: () => selectFileInfo,
   selectFileWarnings: () => selectFileWarnings,
   selectFileWarningsByRule: () => selectFileWarningsByRule,
@@ -242329,6 +242380,26 @@ function selectFileInfo(state, path39) {
     dataUrl
   };
 }
+function selectFileDependencies(state, path39) {
+  var _a6, _b;
+  return (_b = (_a6 = state.local.watch.files[(0, import_node_path4.resolve)(path39)]) === null || _a6 === void 0 ? void 0 : _a6.localDependencies) !== null && _b !== void 0 ? _b : [];
+}
+function selectAllDependencies(state, projectPath) {
+  return Object.entries(state.local.watch.files).filter(([file]) => !projectPath || file.startsWith((0, import_node_path4.resolve)(projectPath))).map(([, value]) => {
+    var _a6;
+    return (_a6 = value.localDependencies) !== null && _a6 !== void 0 ? _a6 : [];
+  }).flat();
+}
+function selectDependentFiles(state, path39) {
+  const dependentFiles = [];
+  Object.entries(state.local.watch.files).forEach(([key2, value]) => {
+    var _a6;
+    if ((_a6 = value.localDependencies) === null || _a6 === void 0 ? void 0 : _a6.includes((0, import_node_path4.resolve)(path39))) {
+      dependentFiles.push(key2);
+    }
+  });
+  return dependentFiles;
+}
 function selectPageSlug(state, projectPath, path39) {
   const project = selectLocalProject(state, projectPath);
   if (!project)
@@ -242423,6 +242494,14 @@ var watch = (0, import_toolkit.createSlice)({
       const { path: path39, sha256 = null } = action.payload;
       state.files[(0, import_node_path5.resolve)(path39)] = { ...state.files[(0, import_node_path5.resolve)(path39)], sha256 };
     },
+    addLocalDependency(state, action) {
+      var _a6;
+      const { path: path39, dependency } = action.payload;
+      const existingDeps = [...(_a6 = state.files[(0, import_node_path5.resolve)(path39)].localDependencies) !== null && _a6 !== void 0 ? _a6 : []];
+      if (!existingDeps.includes(dependency)) {
+        state.files[(0, import_node_path5.resolve)(path39)].localDependencies = [...existingDeps, dependency];
+      }
+    },
     updateFileInfo(state, action) {
       const { path: path39, sha256, title, short_title, description, date, thumbnail, thumbnailOptimized, banner, bannerOptimized, tags, url, dataUrl } = action.payload;
       const resolvedPath = (0, import_node_path5.resolve)(path39);
@@ -282832,8 +282911,7 @@ var codeDirective = {
 var codeCellDirective = {
   name: "code-cell",
   arg: {
-    type: String,
-    required: true
+    type: String
   },
   options: {
     tags: {
@@ -282844,25 +282922,25 @@ var codeCellDirective = {
     type: String
   },
   run(data, vfile2) {
-    var _a6, _b, _c, _d2;
+    var _a6, _b, _c, _d2, _e;
     const code7 = {
       type: "code",
       lang: data.arg,
       executable: true,
-      value: data.body
+      value: (_a6 = data.body) !== null && _a6 !== void 0 ? _a6 : ""
     };
     let tags;
-    if (typeof ((_a6 = data.options) === null || _a6 === void 0 ? void 0 : _a6.tags) === "string") {
+    if (typeof ((_b = data.options) === null || _b === void 0 ? void 0 : _b.tags) === "string") {
       try {
         tags = js_yaml_default.load(data.options.tags);
       } catch (error) {
         fileError(vfile2, "Could not load tags for code-cell directive", {
-          node: (_b = select('mystDirectiveOption[name="tags"]', data.node)) !== null && _b !== void 0 ? _b : data.node,
+          node: (_c = select('mystDirectiveOption[name="tags"]', data.node)) !== null && _c !== void 0 ? _c : data.node,
           source: "code-cell:tags",
           ruleId: RuleId.directiveOptionsCorrect
         });
       }
-    } else if (((_c = data.options) === null || _c === void 0 ? void 0 : _c.tags) && Array.isArray(data.options.tags)) {
+    } else if (((_d2 = data.options) === null || _d2 === void 0 ? void 0 : _d2.tags) && Array.isArray(data.options.tags)) {
       tags = data.options.tags;
     }
     if (tags && Array.isArray(tags) && tags.every((t2) => typeof t2 === "string")) {
@@ -282871,12 +282949,25 @@ var codeCellDirective = {
       }
     } else if (tags) {
       fileWarn(vfile2, "tags in code-cell directive must be a list of strings", {
-        node: (_d2 = select('mystDirectiveOption[name="tags"]', data.node)) !== null && _d2 !== void 0 ? _d2 : data.node,
+        node: (_e = select('mystDirectiveOption[name="tags"]', data.node)) !== null && _e !== void 0 ? _e : data.node,
         source: "code-cell:tags",
         ruleId: RuleId.directiveOptionsCorrect
       });
     }
-    return [code7];
+    const output2 = {
+      type: "output",
+      id: nanoid(),
+      data: []
+    };
+    const block5 = {
+      type: "block",
+      meta: void 0,
+      children: [code7, output2],
+      data: {
+        type: "notebook-code"
+      }
+    };
+    return [block5];
   }
 };
 
@@ -283394,7 +283485,7 @@ var tableDirective = {
     type: "myst",
     required: true
   },
-  run(data, vfile2) {
+  run(data) {
     var _a6, _b;
     const children = [];
     if (data.arg) {
@@ -283403,13 +283494,6 @@ var tableDirective = {
         children: [{ type: "paragraph", children: data.arg }]
       });
     }
-    const body3 = data.body;
-    if (!select("table", { type: "root", children: body3 })) {
-      fileError(vfile2, "table directive does not include a markdown table in the body", {
-        node: data.node,
-        ruleId: RuleId.directiveBodyCorrect
-      });
-    }
     children.push(...data.body);
     const { label, identifier } = normalizeLabel((_a6 = data.options) === null || _a6 === void 0 ? void 0 : _a6.label) || {};
     const container4 = {
@@ -285736,7 +285820,7 @@ var import_node_path15 = __toESM(require("path"), 1);
 var import_nbtx = __toESM(require_cjs2(), 1);
 
 // ../myst-cli/dist/version.js
-var version2 = "1.1.36";
+var version2 = "1.1.37";
 var version_default2 = version2;
 
 // ../myst-cli/dist/utils/headers.js
@@ -286276,6 +286360,8 @@ async function writeBase64(session, writeFolder, data, contentType) {
   const file = `${hash}${ext2}`;
   const filePath = import_node_path15.default.join(writeFolder, file);
   session.log.debug(`Writing binary output file ${justData.length} bytes to ${filePath}`);
+  if (!import_node_fs10.default.existsSync(writeFolder))
+    import_node_fs10.default.mkdirSync(writeFolder, { recursive: true });
   import_node_fs10.default.writeFileSync(filePath, justData, {
     encoding: "base64"
   });
@@ -286719,12 +286805,6 @@ async function transformDeleteBase64UrlSource(mdast2) {
 }
 
 // ../myst-cli/dist/process/notebook.js
-function createOutputDirective() {
-  const id = nanoid();
-  return { myst: `\`\`\`{output}
-:id: ${id}
-\`\`\``, id };
-}
 function blockParent(cell3, children) {
   const type2 = cell3.cell_type === import_nbtx2.CELL_TYPES.code ? NotebookCell.code : NotebookCell.content;
   return { type: "block", meta: JSON.stringify({ type: type2, ...cell3.metadata }), children };
@@ -286768,7 +286848,6 @@ async function processNotebook(session, file, content3, opts) {
   const language = (_b = (_a6 = metadata === null || metadata === void 0 ? void 0 : metadata.kernelspec) === null || _a6 === void 0 ? void 0 : _a6.language) !== null && _b !== void 0 ? _b : "python";
   log.debug(`Processing Notebook: "${file}"`);
   const cache = castSession(session);
-  const outputMap = {};
   let end = cells2.length;
   if (cells2 && cells2.length > 1 && (cells2 === null || cells2 === void 0 ? void 0 : cells2[cells2.length - 1].source.length) === 0) {
     end = -1;
@@ -286788,34 +286867,34 @@ async function processNotebook(session, file, content3, opts) {
       return acc.concat(blockParent(cell3, cellMdast.children));
     }
     if (cell3.cell_type === import_nbtx2.CELL_TYPES.raw) {
-      const cellContent = `\`\`\`
-${(0, import_nbtx2.ensureString)(cell3.source)}
-\`\`\``;
-      const cellMdast = parseMyst(session, cellContent, file);
-      return acc.concat(blockParent(cell3, cellMdast.children));
+      const raw2 = {
+        type: "code",
+        lang: "",
+        value: (0, import_nbtx2.ensureString)(cell3.source)
+      };
+      return acc.concat(blockParent(cell3, [raw2]));
     }
     if (cell3.cell_type === import_nbtx2.CELL_TYPES.code) {
-      const cellCodeContent = `\`\`\`{code-cell} ${language}
-${(0, import_nbtx2.ensureString)(cell3.source)}
-\`\`\``;
-      const cellCodeMdast = parseMyst(session, cellCodeContent, file);
-      const { myst: myst2, id } = createOutputDirective();
+      const code7 = {
+        type: "code",
+        lang: language,
+        executable: true,
+        value: (0, import_nbtx2.ensureString)(cell3.source)
+      };
+      const output2 = {
+        type: "output",
+        id: nanoid(),
+        data: []
+      };
       if (cell3.outputs && cell3.outputs.length > 0) {
         const minified = await (0, import_nbtx2.minifyCellOutput)(cell3.outputs, cache.$outputs, { computeHash, maxCharacters: opts === null || opts === void 0 ? void 0 : opts.minifyMaxCharacters });
-        outputMap[id] = minified;
-      } else {
-        outputMap[id] = [];
+        output2.data = minified;
       }
-      const cellOutputMdast = parseMyst(session, myst2, file);
-      return acc.concat(blockParent(cell3, [...cellCodeMdast.children, ...cellOutputMdast.children]));
+      return acc.concat(blockParent(cell3, [code7, output2]));
     }
     return acc;
   }, Promise.resolve([])));
-  const mdast2 = { type: "root", children: items };
-  selectAll("output", mdast2).forEach((output2) => {
-    output2.data = outputMap[output2.id];
-  });
-  return mdast2;
+  return { type: "root", children: items };
 }
 
 // ../myst-cli/dist/process/file.js
@@ -296120,6 +296199,30 @@ function propagateBlockDataToCode(session, vfile2, mdast2) {
       outputNode.visibility = "show";
   });
 }
+function transformLiftCodeBlocksInJupytext(mdast2) {
+  const flattened = mdast2.children.reduce((acc, node3) => {
+    var _a6, _b;
+    if (node3.type !== "block" || !node3.children)
+      return [...acc, node3];
+    const buriedCodeCells = selectAll("block:has(block)", node3);
+    if (buriedCodeCells.length === 0)
+      return [...acc, node3];
+    const newBlocks = [{ ...node3, children: [] }];
+    (_a6 = node3.children) === null || _a6 === void 0 ? void 0 : _a6.forEach((child) => {
+      var _a7, _b2, _c, _d2;
+      if (child.type === "block" && ((_a7 = child.children) === null || _a7 === void 0 ? void 0 : _a7.length) === 2 && ((_b2 = child.children) === null || _b2 === void 0 ? void 0 : _b2[0].type) === "code" && ((_c = child.children) === null || _c === void 0 ? void 0 : _c[1].type) === "output") {
+        newBlocks.push(child);
+        newBlocks.push({ type: "block", children: [] });
+        return;
+      }
+      (_d2 = newBlocks[newBlocks.length - 1].children) === null || _d2 === void 0 ? void 0 : _d2.push(child);
+    });
+    if (((_b = newBlocks[newBlocks.length - 1].children) === null || _b === void 0 ? void 0 : _b.length) === 0)
+      newBlocks.pop();
+    return [...acc, ...newBlocks];
+  }, []);
+  mdast2.children = flattened;
+}
 
 // ../myst-cli/dist/transforms/dois.js
 async function getDoiOrgBibtex(log, doiString) {
@@ -296273,7 +296376,7 @@ var filter2 = (
 );
 
 // ../myst-cli/dist/transforms/embed.js
-function embedTransform(session, mdast2, dependencies, state) {
+function embedTransform(session, mdast2, file, dependencies, state) {
   const embedNodes = selectAll("embed", mdast2);
   embedNodes.forEach((node3) => {
     var _a6, _b, _c, _d2;
@@ -296311,12 +296414,16 @@ function embedTransform(session, mdast2, dependencies, state) {
     const multiState = state;
     if (!multiState.states)
       return;
-    const { url, file } = (_b = multiState.resolveStateProvider(normalized.identifier)) !== null && _b !== void 0 ? _b : {};
+    const { url, file: depFile } = (_b = multiState.resolveStateProvider(normalized.identifier)) !== null && _b !== void 0 ? _b : {};
     if (!url)
       return;
     const source2 = { url, label: (_c = node3.source) === null || _c === void 0 ? void 0 : _c.label };
-    if (file) {
-      const { kind, slug, frontmatter, location: location4 } = (_d2 = selectFile(session, file)) !== null && _d2 !== void 0 ? _d2 : {};
+    if (depFile) {
+      session.store.dispatch(watch.actions.addLocalDependency({
+        path: file,
+        dependency: depFile
+      }));
+      const { kind, slug, frontmatter, location: location4 } = (_d2 = selectFile(session, depFile)) !== null && _d2 !== void 0 ? _d2 : {};
       if (kind)
         source2.kind = kind;
       if (slug)
@@ -296370,6 +296477,10 @@ async function includeFilesTransform(session, baseFile, tree, vfile2) {
       });
       return;
     }
+    session.store.dispatch(watch.actions.addLocalDependency({
+      path: baseFile,
+      dependency: fullFile
+    }));
     return import_node_fs23.default.readFileSync(fullFile).toString();
   };
   const parseContent = (filename, content3) => {
@@ -296766,13 +296877,28 @@ function renderExpression(node3, file) {
   const result = node3.result;
   if (!result)
     return [];
+  let content3;
   if (result.status === "ok") {
-    if (result.data["text/latex"]) {
-      return [{ type: "inlineMath", value: processLatex(result.data["text/latex"]) }];
-    }
-    if (result.data["text/plain"]) {
-      return [{ type: "text", value: result.data["text/plain"] }];
-    }
+    Object.entries(result.data).forEach(([mimeType, value]) => {
+      if (content3) {
+        return;
+      } else if (mimeType.startsWith("image/")) {
+        content3 = [
+          {
+            type: "image",
+            url: `data:${mimeType}${BASE64_HEADER_SPLIT}${value}`
+          }
+        ];
+      } else if (mimeType === "text/latex") {
+        content3 = [{ type: "inlineMath", value: processLatex(value) }];
+      } else if (mimeType === "text/html") {
+        content3 = [{ type: "html", value }];
+      } else if (mimeType === "text/plain") {
+        content3 = [{ type: "text", value }];
+      }
+    });
+    if (content3)
+      return content3;
     fileWarn(file, "Unrecognized mime bundle for inline content", {
       node: node3,
       ruleId: RuleId.inlineExpressionRenders
@@ -296781,6 +296907,7 @@ function renderExpression(node3, file) {
   return [];
 }
 function transformInlineExpressions(mdast2, file) {
+  blockMetadataTransform(mdast2, file);
   const blocks2 = selectAll("block", mdast2).filter((node3) => {
     var _a6, _b;
     return ((_a6 = node3.data) === null || _a6 === void 0 ? void 0 : _a6.type) === NotebookCell.content && ((_b = node3.data) === null || _b === void 0 ? void 0 : _b[metadataSection]);
@@ -296790,14 +296917,14 @@ function transformInlineExpressions(mdast2, file) {
     var _a6;
     const userExpressions = (_a6 = node3.data) === null || _a6 === void 0 ? void 0 : _a6[metadataSection];
     const inlineNodes = selectAll("inlineExpression", node3);
-    inlineNodes.forEach((inlineExpression2) => {
-      const data = findExpression(userExpressions, inlineExpression2.value);
+    inlineNodes.forEach((inlineExpression3) => {
+      const data = findExpression(userExpressions, inlineExpression3.value);
       if (!data)
         return;
       count2 += 1;
-      inlineExpression2.identifier = `eval-${count2}`;
-      inlineExpression2.result = data.result;
-      inlineExpression2.children = renderExpression(inlineExpression2, file);
+      inlineExpression3.identifier = `eval-${count2}`;
+      inlineExpression3.result = data.result;
+      inlineExpression3.children = renderExpression(inlineExpression3, file);
     });
   });
 }
@@ -296870,9 +296997,9 @@ async function transformMdast(session, opts) {
   importMdastFromJson(session, file, mdast2);
   await includeFilesTransform(session, file, mdast2, vfile2);
   liftCodeMetadataToBlock(session, vfile2, mdast2);
-  const pipe = unified().use(reconstructHtmlPlugin).use(htmlPlugin, { htmlHandlers }).use(basicTransformationsPlugin, {
+  const pipe = unified().use(reconstructHtmlPlugin).use(inlineExpressionsPlugin).use(htmlPlugin, { htmlHandlers }).use(basicTransformationsPlugin, {
     parser: (content3) => parseMyst(session, content3, file)
-  }).use(inlineExpressionsPlugin).use(inlineMathSimplificationPlugin).use(mathPlugin, { macros: frontmatter.math }).use(glossaryPlugin, { state }).use(abbreviationPlugin, { abbreviations: frontmatter.abbreviations }).use(enumerateTargetsPlugin, { state }).use(joinGatesPlugin);
+  }).use(inlineMathSimplificationPlugin).use(mathPlugin, { macros: frontmatter.math }).use(glossaryPlugin, { state }).use(abbreviationPlugin, { abbreviations: frontmatter.abbreviations }).use(enumerateTargetsPlugin, { state }).use(joinGatesPlugin);
   (_c = session.plugins) === null || _c === void 0 ? void 0 : _c.transforms.forEach((t2) => {
     if (t2.stage !== "document")
       return;
@@ -296904,13 +297031,16 @@ async function transformMdast(session, opts) {
   await unified().use(codePlugin, { lang: (_d2 = frontmatter === null || frontmatter === void 0 ? void 0 : frontmatter.kernelspec) === null || _d2 === void 0 ? void 0 : _d2.language }).use(footnotesPlugin).run(mdast2, vfile2);
   transformImagesToEmbed(mdast2);
   transformImagesWithoutExt(session, mdast2, file, { imageExtensions });
+  const isJupytext = frontmatter.kernelspec || frontmatter.jupytext;
+  if (isJupytext)
+    transformLiftCodeBlocksInJupytext(mdast2);
   const sha256 = selectors_exports.selectFileInfo(store.getState(), file).sha256;
   const useSlug = pageSlug !== index4;
   const url = projectSlug ? `/${projectSlug}/${useSlug ? pageSlug : ""}` : `/${useSlug ? pageSlug : ""}`;
   const dataUrl = projectSlug ? `/${projectSlug}/${pageSlug}.json` : `/${pageSlug}.json`;
   updateFileInfoFromFrontmatter(session, file, frontmatter, url, dataUrl);
   const data = {
-    kind: frontmatter.kernelspec || frontmatter.jupytext ? SourceFileKind.Notebook : kind,
+    kind: isJupytext ? SourceFileKind.Notebook : kind,
     file,
     location: location4,
     sha256,
@@ -296955,7 +297085,7 @@ async function postProcessMdast(session, { file, checkLinks, pageReferenceStates
     selector: LINKS_SELECTOR
   });
   resolveReferencesTransform(mdast2, state.file, { state });
-  embedTransform(session, mdast2, dependencies, state);
+  embedTransform(session, mdast2, file, dependencies, state);
   const pipe = unified();
   (_a6 = session.plugins) === null || _a6 === void 0 ? void 0 : _a6.transforms.forEach((t2) => {
     if (t2.stage !== "project")
@@ -297373,18 +297503,39 @@ async function fileProcessor(session, file, eventType, siteProject, serverReload
     session.log.warn(`\u26A0\uFE0F No local project path for file: ${file}`);
     return;
   }
+  const projectPath = siteProject.path;
   const pageSlug = selectors_exports.selectPageSlug(session.store.getState(), siteProject.path, file);
-  if (!pageSlug) {
+  const dependencies = selectors_exports.selectDependentFiles(session.store.getState(), file);
+  if (!pageSlug && dependencies.length === 0) {
     session.log.warn(`\u26A0\uFE0F File is not in project: ${file}`);
     return;
   }
-  await fastProcessFile(session, {
-    file,
-    projectPath: siteProject.path,
-    projectSlug: siteProject.slug,
-    pageSlug,
-    ...opts
-  });
+  if (pageSlug) {
+    await fastProcessFile(session, {
+      file,
+      projectPath,
+      projectSlug: siteProject.slug,
+      pageSlug,
+      ...opts
+    });
+  }
+  if (dependencies.length) {
+    session.log.info(`\u{1F504} Updating dependent pages`);
+    await Promise.all([
+      dependencies.map((dep) => {
+        const depSlug = selectors_exports.selectPageSlug(session.store.getState(), projectPath, dep);
+        if (!depSlug)
+          return void 0;
+        return fastProcessFile(session, {
+          file: dep,
+          projectPath,
+          projectSlug: siteProject.slug,
+          pageSlug: depSlug,
+          ...opts
+        });
+      })
+    ]);
+  }
   serverReload();
 }
 function watchProcessor(operation, session, siteProject, serverReload, opts) {
@@ -297413,10 +297564,11 @@ function watchProcessor(operation, session, siteProject, serverReload, opts) {
   };
 }
 function watchContent(session, serverReload, opts) {
-  const siteConfig = selectors_exports.selectCurrentSiteConfig(session.store.getState());
+  const state = session.store.getState();
+  const siteConfig = selectors_exports.selectCurrentSiteConfig(state);
   if (!(siteConfig === null || siteConfig === void 0 ? void 0 : siteConfig.projects))
     return;
-  const siteConfigFile = selectors_exports.selectCurrentSiteFile(session.store.getState());
+  const siteConfigFile = selectors_exports.selectCurrentSiteFile(state);
   const localProjects = siteConfig.projects.filter((proj) => {
     return Boolean(proj.path);
   });
@@ -297424,7 +297576,8 @@ function watchContent(session, serverReload, opts) {
     const ignored = proj.path === "." ? localProjects.filter(({ path: path39 }) => path39 !== ".").map(({ path: path39 }) => (0, import_node_path35.join)(path39, "*")) : [];
     if (siteConfigFile)
       ignored.push(siteConfigFile);
-    import_chokidar.default.watch(proj.path, {
+    const dependencies = new Set(selectors_exports.selectAllDependencies(state, proj.path));
+    import_chokidar.default.watch([proj.path, ...dependencies], {
       ignoreInitial: true,
       ignored: ["public", "**/_build/**", "**/.git/**", ...ignored],
       awaitWriteFinish: { stabilityThreshold: 100, pollInterval: 50 }
@@ -297650,6 +297803,7 @@ async function buildHtml(session, opts) {
 
 // ../myst-cli/dist/build/utils/localArticleExport.js
 var import_node_path51 = __toESM(require("path"), 1);
+var import_chokidar2 = __toESM(require_chokidar(), 1);
 
 // ../myst-cli/dist/build/utils/resolveAndLogErrors.js
 async function resolveAndLogErrors(session, promises, throwOnFailure) {
@@ -299011,6 +299165,16 @@ var handlers3 = {
     } else {
       state.write(`\\qty{${node3.number}}{${(_d2 = (_c = node3.units) === null || _c === void 0 ? void 0 : _c.map((u3) => `\\${u3}`).join("")) !== null && _d2 !== void 0 ? _d2 : ""}}`);
     }
+  },
+  inlineExpression(node3, state) {
+    var _a6;
+    if ((_a6 = node3.children) === null || _a6 === void 0 ? void 0 : _a6.length) {
+      state.renderChildren(node3, true);
+    } else {
+      state.write("\\texttt{");
+      state.text(node3.value, false);
+      state.write("}");
+    }
   }
 };
 var TexSerializer = class {
@@ -299395,14 +299559,14 @@ async function localArticleToTexTemplated(session, file, templateOptions, projec
     const state = session.store.getState();
     frontmatter = (_a6 = selectors_exports.selectLocalProjectConfig(state, projectPath !== null && projectPath !== void 0 ? projectPath : ".")) !== null && _a6 !== void 0 ? _a6 : {};
     const { dir, name: name2, ext: ext2 } = import_node_path43.default.parse(output2);
-    const includeFileBases = results.map((result, ind) => {
+    const includeFilenames = results.map((result, ind) => {
       var _a7, _b;
-      const base5 = `${name2}-${(_b = (_a7 = content3[ind]) === null || _a7 === void 0 ? void 0 : _a7.slug) !== null && _b !== void 0 ? _b : ind}${ext2}`;
-      const includeFile = import_node_path43.default.format({ dir, ext: ext2, base: base5 });
+      const includeFilename = `${name2}-${(_b = (_a7 = content3[ind]) === null || _a7 === void 0 ? void 0 : _a7.slug) !== null && _b !== void 0 ? _b : ind}`;
+      const includeFile = import_node_path43.default.format({ dir, ext: ext2, base: `${includeFilename}${ext2}` });
       writeFileToFolder(includeFile, result.value);
-      return base5;
+      return includeFilename;
     });
-    texContent = includeFileBases.map((base5) => `\\include{${base5}}`).join("\n");
+    texContent = includeFilenames.map((base5) => `\\include{${base5}}`).join("\n");
   }
   session.log.info(toc(`\u{1F4D1} Exported TeX in %s, copying to ${output2}`));
   const { preamble, suffix } = generatePreamble(preambleData);
@@ -299468,26 +299632,52 @@ var containerHandler2 = (node3, state) => {
   state.ensureNewLine();
   const prevState = state.data.isInFigure;
   state.data.isInFigure = true;
-  const { label } = node3;
-  const caption3 = select("caption", node3);
-  const image6 = select("image", node3);
-  if (!image6) {
-    fileError(state.file, `Figure only supports image children at the moment!`, {
+  const { label, kind } = node3;
+  const captions = selectAll("caption,legend", node3);
+  const imagesAndTables = selectAll("image,table", node3);
+  if (label === "table10") {
+    console.log(imagesAndTables);
+  }
+  if (imagesAndTables.length !== 1) {
+    fileWarn(state.file, `Typst best supports figures with single image or table`, {
       node: node3,
-      source: "myst-to-typst"
+      source: "myst-to-typst",
+      note: `Figure "${label !== null && label !== void 0 ? label : "unlabeled"}" may not render correctly`
     });
-    return;
   }
-  state.write("#figure(\n  ");
-  state.renderChildren({ children: [image6] }, true);
-  state.trimEnd();
-  state.write(",");
-  if (caption3) {
+  if (imagesAndTables.length > 1) {
+    state.write("#figure((\n  ");
+    imagesAndTables.forEach((item) => {
+      state.renderChildren({ children: [item] });
+      state.write(",");
+    });
+    state.trimEnd();
+    state.write(").join(),");
+  } else if (imagesAndTables.length === 1) {
+    state.write("#figure(\n  ");
+    state.renderChildren({ children: [imagesAndTables[0]] });
+    state.trimEnd();
+    state.write(",");
+  } else {
+    state.write("#figure([\n  ");
+    state.renderChildren(node3, true);
+    state.trimEnd();
+    state.write("],");
+  }
+  if (captions.length) {
     state.write("\n  caption: [");
-    state.renderChildren(caption3, true);
+    state.renderChildren({
+      children: captions.map((cap2) => cap2.children).filter(Boolean).flat()
+    }, true);
     state.trimEnd();
     state.write("],");
   }
+  if (kind) {
+    state.write(`
+  kind: "${kind}",`);
+    state.write(`
+  supplement: [${kind[0].toUpperCase() + kind.substring(1)}],`);
+  }
   state.write("\n)");
   if (label)
     state.write(` <${label}>`);
@@ -299696,7 +299886,7 @@ function stringToLatexText2(text7) {
       return `${s5}$${next.text}$`;
     return s5 + next.text;
   }, "");
-  const final = replaced.replace(new RegExp(BACKSLASH_SPACE2, "g"), "\\\\ ").replace(new RegExp(BACKSLASH2, "g"), "\\\\").replace(new RegExp(COMMENT, "g"), "\\/\\/").replace(new RegExp(TILDE2, "g"), "#sym.tilde");
+  const final = replaced.replace(new RegExp(BACKSLASH_SPACE2, "g"), "\\\\ ").replace(new RegExp(BACKSLASH2, "g"), "\\\\").replace(new RegExp(COMMENT, "g"), "\\/\\/").replace(new RegExp(TILDE2, "g"), "$tilde$");
   return cleanWhitespaceChars2(final, "~");
 }
 function stringToLatexMath2(text7) {
@@ -300014,6 +300204,62 @@ var inlineMath3 = (node3, state) => {
 var MATH_HANDLERS3 = { math: math5, inlineMath: inlineMath3 };
 var math_default2 = MATH_HANDLERS3;
 
+// ../myst-to-typst/dist/table.js
+function countColumns(table5) {
+  var _a6, _b;
+  const firstRow = (_a6 = table5.children) === null || _a6 === void 0 ? void 0 : _a6.find((child) => child.type === "tableRow");
+  const columns = (_b = firstRow === null || firstRow === void 0 ? void 0 : firstRow.children) === null || _b === void 0 ? void 0 : _b.filter((cell3) => cell3.type === "tableCell").reduce((val, cell3) => {
+    var _a7;
+    return val + ((_a7 = cell3.colspan) !== null && _a7 !== void 0 ? _a7 : 1);
+  }, 0);
+  return columns;
+}
+function isHeaderRow(node3) {
+  var _a6;
+  if (node3.type !== "tableRow")
+    return false;
+  return (_a6 = node3.children) === null || _a6 === void 0 ? void 0 : _a6.filter((child) => child.type === "tableCell").every((child) => child.header);
+}
+function countHeaderRows(table5) {
+  var _a6, _b;
+  const headerRows = (_a6 = table5.children) === null || _a6 === void 0 ? void 0 : _a6.filter((child) => isHeaderRow(child));
+  return (_b = headerRows === null || headerRows === void 0 ? void 0 : headerRows.length) !== null && _b !== void 0 ? _b : 0;
+}
+var tableHandler = (node3, state) => {
+  const command = state.data.isInFigure ? "tablex" : "#tablex";
+  const columns = countColumns(node3);
+  if (!columns) {
+    fileError(state.file, "Unable to count table columns", {
+      node: node3,
+      source: "myst-to-typst"
+    });
+    return;
+  }
+  state.useMacro('#import "@preview/tablex:0.0.7": tablex, cellx');
+  state.write(`${command}(columns: ${columns}, header-rows: ${countHeaderRows(node3)},
+`);
+  state.renderChildren(node3);
+  state.write(")\n");
+};
+var tableRowHandler = (node3, state) => {
+  state.renderChildren(node3);
+};
+var tableCellHandler = (node3, state) => {
+  if (node3.rowspan || node3.colspan) {
+    state.write("cellx(");
+    if (node3.rowspan) {
+      state.write(`rowspan: ${node3.rowspan}, `);
+    }
+    if (node3.colspan) {
+      state.write(`colspan: ${node3.colspan}, `);
+    }
+    state.write(")");
+  }
+  state.write("[");
+  state.renderChildren(node3);
+  state.write("],");
+};
+
 // ../myst-to-typst/dist/index.js
 var admonition2 = `#let admonition(body, heading: none, color: blue) = {
   let stroke = (left: 2pt + color.darken(20%))
@@ -300045,6 +300291,17 @@ var blockquote3 = `#let blockquote(node, color: gray) = {
   block(width: 100%, inset: 8pt, stroke: stroke)[#node]
 }`;
 var INDENT = "  ";
+var linkHandler = (node3, state) => {
+  const href = node3.url;
+  state.write('#link("');
+  state.write(hrefToLatexText2(href));
+  state.write('")');
+  if (node3.children.length && node3.children[0].value !== href) {
+    state.write("[");
+    state.renderChildren(node3, true);
+    state.write("]");
+  }
+};
 var handlers4 = {
   text(node3, state) {
     state.text(node3.value);
@@ -300113,10 +300370,10 @@ var handlers4 = {
     state.renderChildren(node3, true);
     state.write("\n");
   },
-  // thematicBreak(node, state) {
-  //   state.write('\n\\bigskip\n\\centerline{\\rule{13cm}{0.4pt}}\n\\bigskip');
-  //   state.closeBlock(node);
-  // },
+  thematicBreak(node3, state) {
+    state.write("#line(length: 100%, stroke: gray)");
+    state.closeBlock(node3);
+  },
   ...math_default2,
   mystRole(node3, state) {
     state.renderChildren(node3, true);
@@ -300181,18 +300438,7 @@ ${node3.value}
   abbreviation(node3, state) {
     state.renderChildren(node3, true);
   },
-  link(node3, state) {
-    var _a6;
-    const href = node3.url;
-    state.write('#link("');
-    state.write(hrefToLatexText2(href));
-    state.write('")');
-    if (((_a6 = node3.children[0]) === null || _a6 === void 0 ? void 0 : _a6.value) !== href) {
-      state.write("[");
-      state.renderChildren(node3, true);
-      state.write("]");
-    }
-  },
+  link: linkHandler,
   admonition(node3, state) {
     state.useMacro(admonition2);
     state.ensureNewLine();
@@ -300221,7 +300467,9 @@ ${node3.value}
   admonitionTitle() {
     return;
   },
-  // table: renderNodeToLatex,
+  table: tableHandler,
+  tableRow: tableRowHandler,
+  tableCell: tableCellHandler,
   image(node3, state) {
     const { width: nodeWidth, url: nodeSrc, align } = node3;
     const src = nodeSrc;
@@ -300232,6 +300480,7 @@ ${node3.value}
   },
   container: containerHandler2,
   caption: captionHandler2,
+  legend: captionHandler2,
   captionNumber: () => void 0,
   crossReference(node3, state) {
     const id = node3.identifier;
@@ -300241,7 +300490,12 @@ ${node3.value}
     state.renderChildren(node3, true, " ");
   },
   cite(node3, state) {
-    state.write(`@${node3.label}`);
+    var _a6;
+    if (node3.protocol === "doi" || ((_a6 = node3.label) === null || _a6 === void 0 ? void 0 : _a6.startsWith("https://doi.org"))) {
+      linkHandler(node3, state);
+    } else {
+      state.write(`@${node3.label}`);
+    }
   },
   embed(node3, state) {
     state.renderChildren(node3, true);
@@ -300336,7 +300590,7 @@ var TypstSerializer = class {
     if (!inline)
       this.closeBlock(node3);
   }
-  renderEnvironment(node3, env5, opts) {
+  renderEnvironment(node3, env5) {
     this.file.result += `#${env5}[
 `;
     this.renderChildren(node3, true);
@@ -301103,6 +301357,14 @@ var mystDirective2 = (state, node3) => {
 var mystRole2 = (state, node3) => {
   state.renderChildren(node3);
 };
+var inlineExpression = (state, node3, parent2) => {
+  var _a6;
+  if ((_a6 = node3.children) === null || _a6 === void 0 ? void 0 : _a6.length) {
+    state.renderChildren(node3);
+  } else {
+    inlineCode3(state, { ...node3, type: "inlineCode" }, parent2);
+  }
+};
 var defaultHandlers = {
   text: text5,
   paragraph: paragraph2,
@@ -301145,7 +301407,8 @@ var defaultHandlers = {
   cite,
   citeGroup,
   embed: embed2,
-  include: include2
+  include: include2,
+  inlineExpression
 };
 
 // ../myst-to-docx/dist/serializer.js
@@ -302631,8 +302894,8 @@ function tableTransform(mdast2) {
     const head2 = { type: "tableHead", children: [] };
     const body3 = { type: "tableBody", children: [] };
     table5.children.forEach((tr3) => {
-      const isHeaderRow = tr3.children.reduce((h4, v) => h4 && !!v.header, true);
-      if (isHeaderRow && body3.children.length === 0) {
+      const isHeaderRow2 = tr3.children.reduce((h4, v) => h4 && !!v.header, true);
+      if (isHeaderRow2 && body3.children.length === 0) {
         head2.children.push(tr3);
       } else {
         body3.children.push(tr3);
@@ -302938,7 +303201,7 @@ function affiliationIdTransform(frontmatters, idPrefix) {
 }
 
 // ../myst-to-jats/dist/inlineExpression.js
-var inlineExpression = (node3, state) => {
+var inlineExpression2 = (node3, state) => {
   const { identifier, value } = node3;
   state.renderInline(node3, "xref", {
     "ref-type": "custom",
@@ -303500,7 +303763,7 @@ var handlers5 = {
     state.closeNode();
     state.closeNode();
   },
-  inlineExpression
+  inlineExpression: inlineExpression2
 };
 function createText2(text7) {
   return { type: "text", text: escapeForXML2(text7) };
@@ -303824,7 +304087,7 @@ function writeJats(file, content3, opts) {
 }
 
 // ../myst-cli/dist/build/jats/single.js
-async function runJatsExport(session, exportOptions, projectPath, clean3, extraLinkTransformers) {
+async function runJatsExport(session, sourceFile, exportOptions, projectPath, clean3, extraLinkTransformers) {
   const toc = tic();
   const { output: output2, articles, sub_articles } = exportOptions;
   const article = articles[0];
@@ -303878,6 +304141,7 @@ async function runJatsExport(session, exportOptions, projectPath, clean3, extraL
   logMessagesFromVFile(session, jats);
   session.log.info(toc(`\u{1F4D1} Exported JATS in %s, copying to ${output2}`));
   writeFileToFolder(output2, jats.result);
+  return { tempFolders: [] };
 }
 
 // ../myst-cli/dist/build/pdf/single.js
@@ -304266,7 +304530,7 @@ function writeMecaManifest(manifestItems, mecaFolder) {
   const manifest = createManifestXml(manifestItems);
   import_node_fs34.default.writeFileSync(import_node_path49.default.join(mecaFolder, "manifest.xml"), manifest);
 }
-async function runMecaExport(session, exportOptions, projectPath, clean3, extraLinkTransformers) {
+async function runMecaExport(session, sourceFile, exportOptions, projectPath, clean3, extraLinkTransformers) {
   const toc = tic();
   const { output: output2, articles } = exportOptions;
   const article = articles === null || articles === void 0 ? void 0 : articles[0];
@@ -304284,7 +304548,7 @@ async function runMecaExport(session, exportOptions, projectPath, clean3, extraL
   });
   if (jatsExports.length === 0 && article) {
     const jatsOutput = import_node_path49.default.join(mecaFolder, "article.xml");
-    await runJatsExport(session, { ...exportOptions, output: jatsOutput }, projectPath, clean3, extraLinkTransformers);
+    await runJatsExport(session, sourceFile, { ...exportOptions, output: jatsOutput }, projectPath, clean3, extraLinkTransformers);
     addManifestItem(manifestItems, "article-metadata", mecaFolder, jatsOutput);
     const jatsFiles = import_node_path49.default.join(mecaFolder, "files");
     if (import_node_fs34.default.existsSync(jatsFiles)) {
@@ -304316,8 +304580,8 @@ To resolve this, run: myst build --all`, {
     const jatsFiles = import_node_path49.default.join(import_node_path49.default.dirname(jatsOutput), "files");
     if (import_node_fs34.default.existsSync(jatsFiles)) {
       import_node_fs34.default.readdirSync(jatsFiles).forEach((file) => {
-        const sourceFile = import_node_path49.default.join(jatsFiles, file);
-        const fileDest = copyFileToFolder(session, sourceFile, import_node_path49.default.join(mecaFolder, "files"), fileCopyErrorLogFn);
+        const src = import_node_path49.default.join(jatsFiles, file);
+        const fileDest = copyFileToFolder(session, src, import_node_path49.default.join(mecaFolder, "files"), fileCopyErrorLogFn);
         addManifestItem(manifestItems, "article-supporting-file", mecaFolder, fileDest);
       });
     }
@@ -304381,6 +304645,7 @@ To resolve this, run: myst build --all`, {
   zip2.writeZip(output2);
   logMessagesFromVFile(session, vfile2);
   session.log.info(toc(`\u{1F910} MECA output copied and zipped to ${output2} in %s`));
+  return { tempFolders: [] };
 }
 
 // ../myst-cli/dist/build/md/index.js
@@ -308409,8 +308674,8 @@ function container3(node3, _, state, info) {
     const listNodes = selectAll("tableRow", tableNode).map((row2) => {
       const cells2 = selectAll("tableCell", row2);
       if (inHeader) {
-        const isHeaderRow = cells2.map((cell3) => cell3.header).reduce((val, allHeaders) => val ? allHeaders : false, true);
-        if (isHeaderRow) {
+        const isHeaderRow2 = cells2.map((cell3) => cell3.header).reduce((val, allHeaders) => val ? allHeaders : false, true);
+        if (isHeaderRow2) {
           headerRows += 1;
         } else {
           inHeader = false;
@@ -308756,7 +309021,7 @@ function writeMd(file, node3, frontmatter) {
 }
 
 // ../myst-cli/dist/build/md/index.js
-async function runMdExport(session, exportOptions, projectPath, clean3, extraLinkTransformers) {
+async function runMdExport(session, sourceFile, exportOptions, projectPath, clean3, extraLinkTransformers) {
   const toc = tic();
   const { output: output2, articles } = exportOptions;
   const article = articles[0];
@@ -308782,47 +309047,82 @@ async function runMdExport(session, exportOptions, projectPath, clean3, extraLin
   logMessagesFromVFile(session, mdOut);
   session.log.info(toc(`\u{1F4D1} Exported MD in %s, copying to ${output2}`));
   writeFileToFolder(output2, mdOut.result);
+  return { tempFolders: [] };
 }
 
 // ../myst-cli/dist/build/utils/localArticleExport.js
+async function runExportAndWatch(watch2, exportFn, session, $file, exportOptions, projectPath, clean3) {
+  let results = await exportFn(session, $file, exportOptions, projectPath, clean3);
+  if (watch2) {
+    const watchedFiles = /* @__PURE__ */ new Set([
+      $file,
+      ...exportOptions.articles,
+      ...exportOptions.articles.map((article) => {
+        return selectors_exports.selectFileDependencies(session.store.getState(), article);
+      }).flat()
+    ]);
+    import_chokidar2.default.watch([...watchedFiles], {
+      awaitWriteFinish: { stabilityThreshold: 100, pollInterval: 50 }
+    }).on("change", async (eventType, modifiedFile) => {
+      const { reloading } = selectors_exports.selectReloadingState(session.store.getState());
+      if (reloading) {
+        session.store.dispatch(watch.actions.markReloadRequested(true));
+        return;
+      }
+      session.store.dispatch(watch.actions.markReloading(true));
+      session.log.debug(`File modified: "${modifiedFile}" (${eventType})`);
+      while (selectors_exports.selectReloadingState(session.store.getState()).reloadRequested) {
+        session.store.dispatch(watch.actions.markReloadRequested(false));
+        results = await exportFn(session, $file, exportOptions, projectPath, clean3);
+      }
+      session.store.dispatch(watch.actions.markReloading(false));
+      results = await exportFn(session, $file, exportOptions, projectPath, clean3);
+    });
+  }
+  return results;
+}
 async function _localArticleExport(session, exportOptionsList, opts) {
-  const { clean: clean3, projectPath } = opts;
+  const { clean: clean3, projectPath, watch: watch2 } = opts;
   const errors3 = await resolveAndLogErrors(session, exportOptionsList.map(async (exportOptionsWithFile) => {
     var _a6;
     const { $file, $project, ...exportOptions } = exportOptionsWithFile;
     const { format, output: output2 } = exportOptions;
     const sessionClone = session.clone();
     const fileProjectPath = (_a6 = projectPath !== null && projectPath !== void 0 ? projectPath : $project) !== null && _a6 !== void 0 ? _a6 : findCurrentProjectAndLoad(sessionClone, import_node_path51.default.dirname($file));
-    let exportResults;
     if (fileProjectPath) {
       await loadProjectFromDisk(sessionClone, fileProjectPath);
     }
+    let exportFn;
     if (format === ExportFormats.tex) {
       if (import_node_path51.default.extname(output2) === ".zip") {
-        exportResults = await runTexZipExport(sessionClone, $file, exportOptions, fileProjectPath, clean3);
+        exportFn = runTexZipExport;
       } else {
-        exportResults = await runTexExport(sessionClone, $file, exportOptions, fileProjectPath, clean3);
+        exportFn = runTexExport;
       }
     } else if (format === ExportFormats.typst) {
       if (import_node_path51.default.extname(output2) === ".zip") {
-        exportResults = await runTypstZipExport(sessionClone, $file, exportOptions, fileProjectPath, clean3);
+        exportFn = runTypstZipExport;
       } else {
-        exportResults = await runTypstExport(sessionClone, $file, exportOptions, fileProjectPath, clean3);
+        exportFn = runTypstExport;
       }
     } else if (format === ExportFormats.docx) {
-      exportResults = await runWordExport(sessionClone, $file, exportOptions, fileProjectPath, clean3);
+      exportFn = runWordExport;
     } else if (format === ExportFormats.xml) {
-      await runJatsExport(sessionClone, exportOptions, fileProjectPath, clean3);
+      exportFn = runJatsExport;
     } else if (format === ExportFormats.md) {
-      await runMdExport(sessionClone, exportOptions, fileProjectPath, clean3);
+      exportFn = runMdExport;
     } else if (format === ExportFormats.meca) {
-      await runMecaExport(sessionClone, exportOptions, fileProjectPath, clean3);
+      exportFn = runMecaExport;
     } else {
       const keepTexAndLogs = format === ExportFormats.pdftex;
-      const texExportOptions = texExportOptionsFromPdf(sessionClone, exportOptions, keepTexAndLogs, clean3);
-      exportResults = await runTexExport(sessionClone, $file, texExportOptions, fileProjectPath, clean3);
-      await createPdfGivenTexExport(sessionClone, texExportOptions, output2, keepTexAndLogs, clean3, exportResults.hasGlossaries);
+      exportFn = async (fnSession, fnFile, fnOpts, fnPath, fnClean) => {
+        const texExportOptions = texExportOptionsFromPdf(fnSession, fnOpts, keepTexAndLogs, fnClean);
+        const results = await runTexExport(fnSession, fnFile, texExportOptions, fnPath, fnClean);
+        await createPdfGivenTexExport(fnSession, texExportOptions, output2, keepTexAndLogs, fnClean, results.hasGlossaries);
+        return results;
+      };
     }
+    await runExportAndWatch(!!watch2, exportFn, sessionClone, $file, exportOptions, fileProjectPath, clean3);
   }), opts.throwOnFailure);
   return errors3;
 }
@@ -308925,7 +309225,7 @@ function extToKind(ext2) {
   return ext2;
 }
 async function build(session, files, opts) {
-  const { site, all: all10 } = opts;
+  const { site, all: all10, watch: watch2 } = opts;
   const performSiteBuild = all10 || files.length === 0 && exportSite(session, opts);
   const exportOptionsList = await collectAllBuildExportOptions(session, files, opts);
   const exportLogList = exportOptionsList.map((exportOptions) => {
@@ -308949,7 +309249,7 @@ exports:
   } else {
     session.log.info(`\u{1F4EC} Performing exports:
    ${exportLogList.join("\n   ")}`);
-    await localArticleExport(session, exportOptionsList, {});
+    await localArticleExport(session, exportOptionsList, { watch: watch2 });
   }
   if (!performSiteBuild)
     return;
@@ -308959,6 +309259,9 @@ exports:
     session.log.debug(`To build a site, first run 'myst init --site'`);
   } else {
     session.log.info(`\u{1F30E} Building MyST site`);
+    if (watch2) {
+      session.log.warn(`Site content will not be watched and updated; use 'myst start' instead`);
+    }
     if (opts.html) {
       await buildHtml(session, opts);
     } else {
@@ -316244,6 +316547,9 @@ function makeProjectOption(description) {
 function makeAllOption(description) {
   return new Option("-a, --all", description).default(false);
 }
+function makeWatchOption() {
+  return new Option("--watch", "Watch modified files and re-build on change").default(false);
+}
 function makeNamedExportOption(description) {
   return new Option("-o, --output <output>", description);
 }
@@ -316304,7 +316610,7 @@ function makeYesOption() {
 
 // src/build.ts
 function makeBuildCLI(program3) {
-  const command = new Command("build").description("Build PDF, LaTeX, Word and website exports from MyST files").argument("[files...]", "list of files to export").addOption(makePdfOption("Build PDF output")).addOption(makeTexOption("Build LaTeX outputs")).addOption(makeTypstOption("Build Typst outputs")).addOption(makeDocxOption("Build Docx output")).addOption(makeMdOption("Build MD output")).addOption(makeJatsOption("Build JATS xml output")).addOption(makeMecaOptions("Build MECA zip output")).addOption(makeSiteOption("Build MyST site content")).addOption(makeHtmlOption("Build static HTML site content")).addOption(makeAllOption("Build all exports")).addOption(makeNamedExportOption("Output file for the export")).addOption(makeForceOption()).addOption(makeCheckLinksOption()).addOption(makeStrictOption()).action(clirun2(Session, build, program3));
+  const command = new Command("build").description("Build PDF, LaTeX, Word and website exports from MyST files").argument("[files...]", "list of files to export").addOption(makePdfOption("Build PDF output")).addOption(makeTexOption("Build LaTeX outputs")).addOption(makeTypstOption("Build Typst outputs")).addOption(makeDocxOption("Build Docx output")).addOption(makeMdOption("Build MD output")).addOption(makeJatsOption("Build JATS xml output")).addOption(makeMecaOptions("Build MECA zip output")).addOption(makeSiteOption("Build MyST site content")).addOption(makeHtmlOption("Build static HTML site content")).addOption(makeAllOption("Build all exports")).addOption(makeWatchOption()).addOption(makeNamedExportOption("Output file for the export")).addOption(makeForceOption()).addOption(makeCheckLinksOption()).addOption(makeStrictOption()).action(clirun2(Session, build, program3));
   return command;
 }
 

mystmd-1.1.36.dist-info/RECORD

@@ -1,9 +0,0 @@
-mystmd_py/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-mystmd_py/main.py,sha256=_dRwNvYQ3xult25BmsZgXMWe1asD_wuSW8JeWV-S3c0,1411
-mystmd_py/myst.cjs,sha256=_nuDWYu_fHscxMpCVzs1sS8v7B_27xuf0R_gNQgDE30,13207642
-mystmd-1.1.36.dist-info/LICENSE,sha256=vgXlcTOVbxYpGiMuE9NqgguIBXAH0hJAktlaxiyZ2wg,1088
-mystmd-1.1.36.dist-info/METADATA,sha256=oTtt-jXGgCj1AIiEXxHdeVK-CJiET0KGVUnZTt8Gxqw,2601
-mystmd-1.1.36.dist-info/WHEEL,sha256=oiQVh_5PnQM0E3gPdiz09WCNmwiHDMaGer_elqB3coM,92
-mystmd-1.1.36.dist-info/entry_points.txt,sha256=eC2ol2gqS2q5E-ktkMrBSvV0tckGUcNGS-c4hEQ-_V4,45
-mystmd-1.1.36.dist-info/top_level.txt,sha256=__Xz3ZzAj4SsfBUP5OFexvriJM7gBwu8L2r3TL6UXKE,10
-mystmd-1.1.36.dist-info/RECORD,,