myokit 1.36.1__py3-none-any.whl → 1.37.1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- myokit/__init__.py +6 -19
- myokit/_aux.py +4 -0
- myokit/_datablock.py +55 -65
- myokit/_datalog.py +42 -7
- myokit/_err.py +26 -3
- myokit/_expressions.py +241 -127
- myokit/_model_api.py +19 -13
- myokit/_myokit_version.py +1 -1
- myokit/_sim/jacobian.py +3 -3
- myokit/_sim/openclsim.py +5 -5
- myokit/_sim/rhs.py +1 -1
- myokit/formats/__init__.py +4 -9
- myokit/formats/ansic/_ewriter.py +4 -20
- myokit/formats/axon/_abf.py +11 -4
- myokit/formats/diffsl/__init__.py +60 -0
- myokit/formats/diffsl/_ewriter.py +145 -0
- myokit/formats/diffsl/_exporter.py +435 -0
- myokit/formats/heka/_patchmaster.py +345 -115
- myokit/formats/opencl/_ewriter.py +3 -42
- myokit/formats/opencl/template/minilog.py +1 -1
- myokit/formats/sympy/_ereader.py +2 -1
- myokit/formats/wcp/_wcp.py +3 -3
- myokit/gui/datalog_viewer.py +28 -9
- myokit/lib/markov.py +2 -2
- myokit/lib/plots.py +4 -4
- myokit/tests/data/formats/wcp-file-empty.wcp +0 -0
- myokit/tests/data/io/bad1d-2-no-header.zip +0 -0
- myokit/tests/data/io/bad1d-3-no-data.zip +0 -0
- myokit/tests/data/io/bad1d-4-not-a-zip.zip +1 -105
- myokit/tests/data/io/bad1d-5-bad-data-type.zip +0 -0
- myokit/tests/data/io/bad1d-6-time-too-short.zip +0 -0
- myokit/tests/data/io/bad1d-7-0d-too-short.zip +0 -0
- myokit/tests/data/io/bad1d-8-1d-too-short.zip +0 -0
- myokit/tests/data/io/bad2d-2-no-header.zip +0 -0
- myokit/tests/data/io/bad2d-3-no-data.zip +0 -0
- myokit/tests/data/io/bad2d-4-not-a-zip.zip +1 -105
- myokit/tests/data/io/bad2d-5-bad-data-type.zip +0 -0
- myokit/tests/data/io/bad2d-8-2d-too-short.zip +0 -0
- myokit/tests/data/io/block1d.mmt +187 -0
- myokit/tests/data/io/datalog-18-duplicate-keys.csv +4 -0
- myokit/tests/test_aux.py +4 -0
- myokit/tests/test_datablock.py +16 -16
- myokit/tests/test_datalog.py +24 -1
- myokit/tests/test_expressions.py +532 -251
- myokit/tests/test_formats_ansic.py +6 -18
- myokit/tests/test_formats_cpp.py +0 -5
- myokit/tests/test_formats_cuda.py +7 -15
- myokit/tests/test_formats_diffsl.py +728 -0
- myokit/tests/test_formats_easyml.py +4 -9
- myokit/tests/test_formats_exporters_run.py +3 -0
- myokit/tests/test_formats_latex.py +10 -11
- myokit/tests/test_formats_matlab.py +0 -8
- myokit/tests/test_formats_opencl.py +0 -29
- myokit/tests/test_formats_python.py +2 -19
- myokit/tests/test_formats_stan.py +0 -13
- myokit/tests/test_formats_sympy.py +3 -3
- myokit/tests/test_formats_wcp.py +15 -0
- myokit/tests/test_model.py +20 -20
- myokit/tests/test_parsing.py +19 -0
- {myokit-1.36.1.dist-info → myokit-1.37.1.dist-info}/METADATA +1 -1
- {myokit-1.36.1.dist-info → myokit-1.37.1.dist-info}/RECORD +65 -58
- {myokit-1.36.1.dist-info → myokit-1.37.1.dist-info}/LICENSE.txt +0 -0
- {myokit-1.36.1.dist-info → myokit-1.37.1.dist-info}/WHEEL +0 -0
- {myokit-1.36.1.dist-info → myokit-1.37.1.dist-info}/entry_points.txt +0 -0
- {myokit-1.36.1.dist-info → myokit-1.37.1.dist-info}/top_level.txt +0 -0
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#!/usr/bin/env python3
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#
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# Tests the DiffSL module.
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#
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# This file is part of Myokit.
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# See http://myokit.org for copyright, sharing, and licensing details.
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#
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import itertools
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import unittest
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import myokit
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import myokit.formats
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import myokit.formats.diffsl
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import myokit.tests
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from myokit import (Abs, ACos, And, ASin, ATan, Ceil, Cos, Divide, Equal, Exp,
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Floor, If, Less, LessEqual, Log, Log10, Minus, More,
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MoreEqual, Multiply, Not, NotEqual, Number, Or, Piecewise,
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Plus, Power, PrefixMinus, PrefixPlus, Quotient, Remainder,
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Sin, Sqrt, Tan)
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from myokit.tests import TemporaryDirectory, WarningCollector
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# Model that requires unit conversion
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units_model = """
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[[model]]
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mb.V = -0.08
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hh.x = 0.1
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hh.y = 0.9
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mm.C = 0.9
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[engine]
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pace = 0 bind pace
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time = 0 [s]
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in [s]
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bind time
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[ideal]
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Vc = engine.pace * 1
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[mb]
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dot(V) = (hh.I1 + mm.I2 + tt.I3) / C
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in [V]
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C = 20 [pF]
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in [pF]
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[hh]
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dot(x) = (inf - x) / tau
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inf = 0.8
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tau = 3 [s]
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in [s]
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dot(y) = alpha * (1 - y) - beta * y
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alpha = 0.1 [1/s]
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in [1/s]
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beta = 0.2 [1/s]
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in [1/s]
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I1 = 3 [pS] * x * y * (mb.V - 0.05 [V])
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in [pA]
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[mm]
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dot_C = beta * O - alpha * C
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dot(C) = dot_C
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alpha = 0.3 [1/s]
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in [1/s]
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beta = 0.4 [1/s]
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in [1/s]
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O = 1 - C
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I2 = 2 [pS] * O * (mb.V + 0.02 [V])
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in [pA]
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[tt]
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I3 = 4 [pS] * mm.O * (mb.V + 0.02 [V])
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tTest = 0
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t_Test = 1
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t_test = 2
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"""
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units_output = """
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/*
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This file was generated by Myokit.
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*/
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/* Input parameters */
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/* E.g. in = [ varZero, varOne, varTwo ] */
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in = [ ]
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/* Engine: pace */
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/* E.g.
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-80 * (1 - sigmoid((t-100)*5000))
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-120 * (sigmoid((t-100)*5000) - sigmoid((t-200)*5000))
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*/
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enginePace { 0.0 } /* engine.pace */
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/* Constants: hh */
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hhXInf { 0.8 } /* hh.x.inf */
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hhXTau { 3.0 } /* hh.x.tau [s] */
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hhYAlpha { 0.1 } /* hh.y.alpha [S/F] */
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hhYBeta { 0.2 } /* hh.y.beta [S/F] */
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/* Constants: mm */
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mmAlpha { 0.3 } /* mm.alpha [S/F] */
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mmBeta { 0.4 } /* mm.beta [S/F] */
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/* Constants: tt */
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ttTTest1 { 0.0 } /* tt.tTest */
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ttTTest2 { 1.0 } /* tt.t_Test */
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ttTTest3 { 2.0 } /* tt.t_test */
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/* Constants: mb */
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mbC { 20.0 } /* mb.C [pF] */
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/* Initial conditions */
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u_i {
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mbV = -0.08 * 1000 [1 (0.001)], /* mb.V [mV] */
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hhX = 0.1, /* hh.x */
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hhY = 0.9, /* hh.y */
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mmC = 0.9, /* mm.C */
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}
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dudt_i {
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diffMbV = 0,
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diffHhX = 0,
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diffHhY = 0,
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diffMmC = 0,
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}
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/* Variables: hh */
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hhI1 { 3.0 * hhX * hhY * (mbV / 1000.0 - 0.05) * 0.05 } /* hh.I1 [A/F] */
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/* Variables: mm */
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mmO { 1.0 - mmC } /* mm.O */
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mmI2 { 2.0 * mmO * (mbV / 1000.0 + 0.02) * 0.05 } /* mm.I2 [A/F] */
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mmDotC { mmBeta * mmO - mmAlpha * mmC } /* mm.dot_C */
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/* Variables: ideal */
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idealVc { enginePace * 1.0 } /* ideal.Vc */
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/* Variables: tt */
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ttI3 { 4.0 * mmO * (mbV / 1000.0 + 0.02) } /* tt.I3 */
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/* Solve */
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F_i {
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diffMbV,
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diffHhX,
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diffHhY,
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diffMmC,
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}
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G_i {
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(hhI1 / 0.05 + mmI2 / 0.05 + ttI3) / mbC * 1000.0 / 1000.0,
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(hhXInf - hhX) / hhXTau / 1000.0,
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(hhYAlpha * (1.0 - hhY) - hhYBeta * hhY) / 1000.0,
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mmDotC / 1000.0,
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}
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/* Output */
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out_i {
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hhX,
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hhY,
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mbV,
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mmC,
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}
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"""
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class DiffSLExporterTest(unittest.TestCase):
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"""Tests DiffSL export."""
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def test_diffsl_exporter(self):
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# Tests exporting a model
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model = myokit.load_model('example')
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with TemporaryDirectory() as d:
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path = d.path('diffsl.model')
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e = myokit.formats.diffsl.DiffSLExporter()
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# Test with simple model
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e.model(path, model)
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# Test with protocol set
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with self.assertRaisesRegex(ValueError, 'input protocol'):
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e.model(path, model, protocol='-80 + 120*heaviside(t-10)')
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# Test with extra bound variables
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model.get('membrane.C').set_binding('hello')
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e.model(path, model)
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# Test without V being a state variable
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v = model.get('membrane.V')
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v.demote()
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v.set_rhs(3)
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e.model(path, model)
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# Test with explicit time dependence
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t0 = model.get('membrane').add_variable('t0')
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t0.set_rhs('0 + engine.time')
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with self.assertRaisesRegex(myokit.ExportError, 'time dependence'):
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e.model(path, model)
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# Test with invalid model
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v.set_rhs('2 * V')
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with self.assertRaisesRegex(myokit.ExportError, 'valid model'):
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e.model(path, model)
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def test_unit_conversion(self):
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# Tests exporting a model that requires unit conversion
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# Export model
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m = myokit.parse_model(units_model)
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e = myokit.formats.diffsl.DiffSLExporter()
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with TemporaryDirectory() as d:
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path = d.path('diffsl.model')
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e.model(path, m)
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with open(path, 'r') as f:
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observed = f.read().strip().splitlines()
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# Get expected output
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expected = units_output.strip().splitlines()
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# Compare (line by line, for readable output)
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for ob, ex in zip(observed, expected):
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self.assertEqual(ob, ex)
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self.assertEqual(len(observed), len(expected))
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# Test warnings are raised if conversion fails
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m.get('mb.V').set_rhs('hh.I1 + mm.I2')
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m.get('mb').remove_variable(m.get('mb.C'))
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with TemporaryDirectory() as d:
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path = d.path('diffsl.model')
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with WarningCollector() as c:
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e.model(path, m)
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self.assertIn('Unable to convert hh.I1', c.text())
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self.assertIn('Unable to convert mm.I2', c.text())
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m.get('engine.time').set_unit(myokit.units.cm)
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with TemporaryDirectory() as d:
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path = d.path('diffsl.model')
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with WarningCollector() as c:
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e.model(path, m)
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self.assertIn('Unable to convert engine.time', c.text())
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def test_diffsl_exporter_fetching(self):
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# Tests getting an DiffSL exporter via the 'exporter' interface
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e = myokit.formats.exporter('diffsl')
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self.assertIsInstance(e, myokit.formats.diffsl.DiffSLExporter)
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def test_capability_reporting(self):
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# Tests if the correct capabilities are reported
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e = myokit.formats.diffsl.DiffSLExporter()
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self.assertTrue(e.supports_model())
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class DiffSLExpressionWriterTest(myokit.tests.ExpressionWriterTestCase):
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"""Test conversion to DiffSL syntax."""
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_name = 'diffsl'
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_target = myokit.formats.diffsl.DiffSLExpressionWriter
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def test_number(self):
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self.eq(Number(1), '1.0')
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self.eq(Number(-2), '-2.0')
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self.eq(Number(13, 'mV'), '13.0')
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def test_name(self):
|
|
265
|
+
# Inherited from CBasedExpressionWriter
|
|
266
|
+
self.eq(self.a, 'a')
|
|
267
|
+
w = self._target()
|
|
268
|
+
w.set_lhs_function(lambda v: v.var().qname().upper())
|
|
269
|
+
self.assertEqual(w.ex(self.a), 'COMP.A')
|
|
270
|
+
|
|
271
|
+
def test_derivative(self):
|
|
272
|
+
# Inherited from CBasedExpressionWriter
|
|
273
|
+
self.eq(myokit.Derivative(self.a), 'dot(a)')
|
|
274
|
+
|
|
275
|
+
def test_partial_derivative(self):
|
|
276
|
+
e = myokit.PartialDerivative(self.a, self.b)
|
|
277
|
+
self.assertRaisesRegex(NotImplementedError, 'Partial', self.w.ex, e)
|
|
278
|
+
|
|
279
|
+
def test_initial_value(self):
|
|
280
|
+
e = myokit.InitialValue(self.a)
|
|
281
|
+
self.assertRaisesRegex(NotImplementedError, 'Initial', self.w.ex, e)
|
|
282
|
+
|
|
283
|
+
def test_prefix_plus_minus(self):
|
|
284
|
+
# Inherited from CBasedExpressionWriter
|
|
285
|
+
p = Number(11, 'kV')
|
|
286
|
+
a, b, c = self.abc
|
|
287
|
+
self.eq(PrefixPlus(p), '+11.0')
|
|
288
|
+
self.eq(PrefixPlus(PrefixPlus(PrefixPlus(p))), '+(+(+11.0))')
|
|
289
|
+
self.eq(Divide(PrefixPlus(Plus(a, b)), c), '+(a + b) / c')
|
|
290
|
+
self.eq(PrefixMinus(p), '-11.0')
|
|
291
|
+
self.eq(PrefixMinus(PrefixMinus(p)), '-(-11.0)')
|
|
292
|
+
self.eq(PrefixMinus(Number(-1)), '-(-1.0)')
|
|
293
|
+
self.eq(PrefixMinus(Minus(a, b)), '-(a - b)')
|
|
294
|
+
self.eq(Multiply(PrefixMinus(Plus(b, a)), c), '-(b + a) * c')
|
|
295
|
+
self.eq(PrefixMinus(Divide(b, a)), '-(b / a)')
|
|
296
|
+
|
|
297
|
+
def test_plus_minus(self):
|
|
298
|
+
a, b, c = self.abc
|
|
299
|
+
self.eq(Plus(a, b), 'a + b')
|
|
300
|
+
self.eq(Plus(Plus(a, b), c), 'a + b + c')
|
|
301
|
+
self.eq(Plus(a, Plus(b, c)), 'a + (b + c)')
|
|
302
|
+
|
|
303
|
+
self.eq(Minus(a, b), 'a - b')
|
|
304
|
+
self.eq(Minus(Minus(a, b), c), 'a - b - c')
|
|
305
|
+
self.eq(Minus(a, Minus(b, c)), 'a - (b - c)')
|
|
306
|
+
|
|
307
|
+
self.eq(Minus(a, b), 'a - b')
|
|
308
|
+
self.eq(Plus(Minus(a, b), c), 'a - b + c')
|
|
309
|
+
self.eq(Minus(a, Plus(b, c)), 'a - (b + c)')
|
|
310
|
+
self.eq(Minus(Plus(a, b), c), 'a + b - c')
|
|
311
|
+
self.eq(Minus(a, Plus(b, c)), 'a - (b + c)')
|
|
312
|
+
|
|
313
|
+
# No expm in DiffSL
|
|
314
|
+
self.eq(Minus(Exp(Number(2)), Number(1)), 'exp(2.0) - 1.0')
|
|
315
|
+
self.eq(Minus(Number(1), Exp(Number(3))), '1.0 - exp(3.0)')
|
|
316
|
+
|
|
317
|
+
def test_multiply_divide(self):
|
|
318
|
+
# Inherited from CBasedExpressionWriter
|
|
319
|
+
a, b, c = self.abc
|
|
320
|
+
self.eq(Multiply(a, b), 'a * b')
|
|
321
|
+
self.eq(Multiply(Multiply(a, b), c), 'a * b * c')
|
|
322
|
+
self.eq(Multiply(a, Multiply(b, c)), 'a * (b * c)')
|
|
323
|
+
self.eq(Divide(a, b), 'a / b')
|
|
324
|
+
self.eq(Divide(Divide(a, b), c), 'a / b / c')
|
|
325
|
+
self.eq(Divide(a, Divide(b, c)), 'a / (b / c)')
|
|
326
|
+
|
|
327
|
+
def test_quotient(self):
|
|
328
|
+
# Inherited from CBasedExpressionWriter
|
|
329
|
+
a, b, c = self.abc
|
|
330
|
+
with WarningCollector():
|
|
331
|
+
self.eq(Quotient(a, b), 'floor(a / b)')
|
|
332
|
+
self.eq(Quotient(Plus(a, c), b), 'floor((a + c) / b)')
|
|
333
|
+
self.eq(Quotient(Divide(a, c), b), 'floor(a / c / b)')
|
|
334
|
+
self.eq(Quotient(a, Divide(b, c)), 'floor(a / (b / c))')
|
|
335
|
+
self.eq(Multiply(Quotient(a, b), c), 'floor(a / b) * c')
|
|
336
|
+
self.eq(Multiply(c, Quotient(a, b)), 'c * (floor(a / b))')
|
|
337
|
+
|
|
338
|
+
def test_remainder(self):
|
|
339
|
+
# Inherited from CBasedExpressionWriter
|
|
340
|
+
a, b, c = self.abc
|
|
341
|
+
with WarningCollector():
|
|
342
|
+
self.eq(Remainder(a, b), '(a - b * floor(a / b))')
|
|
343
|
+
self.eq(
|
|
344
|
+
Remainder(Plus(a, c), b), '(a + c - b * floor((a + c) / b))'
|
|
345
|
+
)
|
|
346
|
+
self.eq(Multiply(Remainder(a, b), c), '(a - b * floor(a / b)) * c')
|
|
347
|
+
self.eq(Divide(c, Remainder(b, a)), 'c / ((b - a * floor(b / a)))')
|
|
348
|
+
|
|
349
|
+
def test_power(self):
|
|
350
|
+
# Inherited from CBasedExpressionWriter
|
|
351
|
+
a, b, c = self.abc
|
|
352
|
+
self.eq(Power(a, b), 'pow(a, b)')
|
|
353
|
+
self.eq(Power(Power(a, b), c), 'pow(pow(a, b), c)')
|
|
354
|
+
self.eq(Power(a, Power(b, c)), 'pow(a, pow(b, c))')
|
|
355
|
+
|
|
356
|
+
def test_log(self):
|
|
357
|
+
# Inherited from CBasedExpressionWriter
|
|
358
|
+
a, b = self.ab
|
|
359
|
+
self.eq(Log(a), 'log(a)')
|
|
360
|
+
self.eq(Log10(a), '(log(a) / log(10.0))')
|
|
361
|
+
self.eq(Log(a, b), '(log(a) / log(b))')
|
|
362
|
+
|
|
363
|
+
def test_supported_functions(self):
|
|
364
|
+
a = self.a
|
|
365
|
+
|
|
366
|
+
self.eq(Abs(a), 'abs(a)')
|
|
367
|
+
self.eq(Cos(a), 'cos(a)')
|
|
368
|
+
self.eq(Exp(a), 'exp(a)')
|
|
369
|
+
self.eq(Log(a), 'log(a)')
|
|
370
|
+
self.eq(Sin(a), 'sin(a)')
|
|
371
|
+
self.eq(Sqrt(a), 'sqrt(a)')
|
|
372
|
+
self.eq(Tan(a), 'tan(a)')
|
|
373
|
+
|
|
374
|
+
def test_unsupported_functions(self):
|
|
375
|
+
a = self.a
|
|
376
|
+
|
|
377
|
+
with WarningCollector() as wc:
|
|
378
|
+
self.eq(ACos(a), 'acos(a)')
|
|
379
|
+
self.assertIn('Unsupported', wc.text())
|
|
380
|
+
|
|
381
|
+
with WarningCollector() as wc:
|
|
382
|
+
self.eq(ASin(a), 'asin(a)')
|
|
383
|
+
self.assertIn('Unsupported', wc.text())
|
|
384
|
+
|
|
385
|
+
with WarningCollector() as wc:
|
|
386
|
+
self.eq(ATan(a), 'atan(a)')
|
|
387
|
+
self.assertIn('Unsupported', wc.text())
|
|
388
|
+
|
|
389
|
+
with WarningCollector() as wc:
|
|
390
|
+
self.eq(Ceil(a), 'ceil(a)')
|
|
391
|
+
self.assertIn('Unsupported', wc.text())
|
|
392
|
+
|
|
393
|
+
with WarningCollector() as wc:
|
|
394
|
+
self.eq(Floor(a), 'floor(a)')
|
|
395
|
+
self.assertIn('Unsupported', wc.text())
|
|
396
|
+
|
|
397
|
+
def test_conditional_operators(self):
|
|
398
|
+
a, b, c, d = self.abcd
|
|
399
|
+
|
|
400
|
+
self.eq(Equal(a, b), 'heaviside(a - b) * heaviside(b - a)')
|
|
401
|
+
|
|
402
|
+
self.eq(Less(a, b), '(1 - heaviside(a - b))')
|
|
403
|
+
|
|
404
|
+
self.eq(LessEqual(a, b), 'heaviside(b - a)')
|
|
405
|
+
|
|
406
|
+
self.eq(More(a, b), '(1 - heaviside(b - a))')
|
|
407
|
+
|
|
408
|
+
self.eq(MoreEqual(a, b), 'heaviside(a - b)')
|
|
409
|
+
|
|
410
|
+
self.eq(NotEqual(a, b), '(1 - heaviside(a - b) * heaviside(b - a))')
|
|
411
|
+
|
|
412
|
+
self.eq(
|
|
413
|
+
Not(NotEqual(a, b)),
|
|
414
|
+
'(1 - (1 - heaviside(a - b) * heaviside(b - a)))',
|
|
415
|
+
)
|
|
416
|
+
|
|
417
|
+
self.eq(
|
|
418
|
+
Not(Not(Equal(a, b))),
|
|
419
|
+
'(1 - (1 - heaviside(a - b) * heaviside(b - a)))',
|
|
420
|
+
)
|
|
421
|
+
|
|
422
|
+
self.eq(
|
|
423
|
+
And(Equal(a, b), NotEqual(c, d)),
|
|
424
|
+
'heaviside(a - b) * heaviside(b - a)'
|
|
425
|
+
' * (1 - heaviside(c - d) * heaviside(d - c))',
|
|
426
|
+
)
|
|
427
|
+
|
|
428
|
+
self.eq(
|
|
429
|
+
Or(More(d, c), MoreEqual(b, a)),
|
|
430
|
+
'(1 - (1 - (1 - heaviside(c - d))) * (1 - heaviside(b - a)))',
|
|
431
|
+
)
|
|
432
|
+
|
|
433
|
+
self.eq(
|
|
434
|
+
Or(Less(d, c), LessEqual(b, a)),
|
|
435
|
+
'(1 - (1 - (1 - heaviside(d - c))) * (1 - heaviside(a - b)))',
|
|
436
|
+
)
|
|
437
|
+
|
|
438
|
+
self.eq(
|
|
439
|
+
Not(Or(Equal(Number(1), Number(2)), Equal(Number(3), Number(4)))),
|
|
440
|
+
'(1 - (1 - (1 - heaviside(1.0 - 2.0) * heaviside(2.0 - 1.0)) '
|
|
441
|
+
'* (1 - heaviside(3.0 - 4.0) * heaviside(4.0 - 3.0))))',
|
|
442
|
+
)
|
|
443
|
+
|
|
444
|
+
self.eq(
|
|
445
|
+
Not(Less(Number(1), Number(2))), '(1 - (1 - heaviside(1.0 - 2.0)))'
|
|
446
|
+
)
|
|
447
|
+
|
|
448
|
+
def test_if_expressions(self):
|
|
449
|
+
a, b, c, d = self.abcd
|
|
450
|
+
|
|
451
|
+
self.eq(
|
|
452
|
+
If(Equal(a, b), c, d),
|
|
453
|
+
'(heaviside(a - b) * heaviside(b - a) * c'
|
|
454
|
+
' + (1 - heaviside(a - b) * heaviside(b - a)) * d)',
|
|
455
|
+
)
|
|
456
|
+
|
|
457
|
+
self.eq(
|
|
458
|
+
If(Equal(a, b), c, Number(0)),
|
|
459
|
+
'(heaviside(a - b) * heaviside(b - a) * c'
|
|
460
|
+
' + (1 - heaviside(a - b) * heaviside(b - a)) * 0.0)',
|
|
461
|
+
)
|
|
462
|
+
|
|
463
|
+
self.eq(
|
|
464
|
+
If(Equal(a, b), Number(0), d),
|
|
465
|
+
'(heaviside(a - b) * heaviside(b - a) * 0.0'
|
|
466
|
+
' + (1 - heaviside(a - b) * heaviside(b - a)) * d)',
|
|
467
|
+
)
|
|
468
|
+
|
|
469
|
+
self.eq(
|
|
470
|
+
If(Equal(a, b), c, Number(1)),
|
|
471
|
+
'(heaviside(a - b) * heaviside(b - a) * c'
|
|
472
|
+
' + (1 - heaviside(a - b) * heaviside(b - a)) * 1.0)',
|
|
473
|
+
)
|
|
474
|
+
|
|
475
|
+
self.eq(
|
|
476
|
+
If(Equal(a, b), Number(1), d),
|
|
477
|
+
'(heaviside(a - b) * heaviside(b - a) * 1.0'
|
|
478
|
+
' + (1 - heaviside(a - b) * heaviside(b - a)) * d)',
|
|
479
|
+
)
|
|
480
|
+
|
|
481
|
+
self.eq(
|
|
482
|
+
If(NotEqual(a, b), c, d),
|
|
483
|
+
'((1 - heaviside(a - b) * heaviside(b - a)) * c'
|
|
484
|
+
' + (1 - (1 - heaviside(a - b) * heaviside(b - a))) * d)',
|
|
485
|
+
)
|
|
486
|
+
|
|
487
|
+
self.eq(
|
|
488
|
+
If(More(a, b), c, d),
|
|
489
|
+
'((1 - heaviside(b - a)) * c + (1 - (1 - heaviside(b - a))) * d)',
|
|
490
|
+
)
|
|
491
|
+
|
|
492
|
+
self.eq(
|
|
493
|
+
If(MoreEqual(a, b), c, d),
|
|
494
|
+
'(heaviside(a - b) * c + (1 - heaviside(a - b)) * d)',
|
|
495
|
+
)
|
|
496
|
+
|
|
497
|
+
self.eq(
|
|
498
|
+
If(Less(a, b), c, d),
|
|
499
|
+
'((1 - heaviside(a - b)) * c + (1 - (1 - heaviside(a - b))) * d)',
|
|
500
|
+
)
|
|
501
|
+
|
|
502
|
+
self.eq(
|
|
503
|
+
If(LessEqual(a, b), c, d),
|
|
504
|
+
'(heaviside(b - a) * c + (1 - heaviside(b - a)) * d)',
|
|
505
|
+
)
|
|
506
|
+
|
|
507
|
+
def test_piecewise_expressions(self):
|
|
508
|
+
a, b, c, d = self.abcd
|
|
509
|
+
|
|
510
|
+
self.eq(Piecewise(Equal(a, b), c, d), self.w.ex(If(Equal(a, b), c, d)))
|
|
511
|
+
|
|
512
|
+
self.eq(
|
|
513
|
+
Piecewise(NotEqual(a, b), c, d),
|
|
514
|
+
self.w.ex(
|
|
515
|
+
If(NotEqual(a, b), c, d),
|
|
516
|
+
),
|
|
517
|
+
)
|
|
518
|
+
|
|
519
|
+
self.eq(
|
|
520
|
+
Piecewise(More(a, b), c, d),
|
|
521
|
+
self.w.ex(
|
|
522
|
+
If(More(a, b), c, d),
|
|
523
|
+
),
|
|
524
|
+
)
|
|
525
|
+
|
|
526
|
+
self.eq(
|
|
527
|
+
Piecewise(MoreEqual(a, b), c, d),
|
|
528
|
+
self.w.ex(If(MoreEqual(a, b), c, d)),
|
|
529
|
+
)
|
|
530
|
+
|
|
531
|
+
self.eq(Piecewise(Less(a, b), c, d), self.w.ex(If(Less(a, b), c, d)))
|
|
532
|
+
|
|
533
|
+
self.eq(
|
|
534
|
+
Piecewise(LessEqual(a, b), c, d),
|
|
535
|
+
self.w.ex(
|
|
536
|
+
If(LessEqual(a, b), c, d),
|
|
537
|
+
),
|
|
538
|
+
)
|
|
539
|
+
|
|
540
|
+
self.eq(
|
|
541
|
+
Piecewise(Equal(a, b), c, Equal(a, d), Number(3), Number(4)),
|
|
542
|
+
self.w.ex(
|
|
543
|
+
If(Equal(a, b), c, If(Equal(a, d), Number(3), Number(4)))
|
|
544
|
+
),
|
|
545
|
+
)
|
|
546
|
+
|
|
547
|
+
self.eq(
|
|
548
|
+
Piecewise(Less(a, b), Number(0), Less(c, d), Number(0), Number(5)),
|
|
549
|
+
'((1 - heaviside(a - b)) * 0.0 '
|
|
550
|
+
'+ (1 - (1 - heaviside(a - b))) * ((1 - heaviside(c - d)) * 0.0 '
|
|
551
|
+
'+ (1 - (1 - heaviside(c - d))) * 5.0))',
|
|
552
|
+
)
|
|
553
|
+
|
|
554
|
+
def test_heaviside_numerical(self):
|
|
555
|
+
"""Test generated heaviside expressions with numerical values"""
|
|
556
|
+
|
|
557
|
+
def heaviside(x):
|
|
558
|
+
return 1 if x >= 0 else 0
|
|
559
|
+
|
|
560
|
+
values = itertools.product(
|
|
561
|
+
[-10e9, -1, -1e-9, 0, 1e-9, 1, 10e9], repeat=4
|
|
562
|
+
)
|
|
563
|
+
|
|
564
|
+
for a, b, c, d in values:
|
|
565
|
+
# a == b
|
|
566
|
+
result = int(a == b)
|
|
567
|
+
expr = self.w.ex(Equal(Number(a), Number(b)))
|
|
568
|
+
self.assertEqual(eval(expr), result)
|
|
569
|
+
|
|
570
|
+
# a < b
|
|
571
|
+
result = int(a < b)
|
|
572
|
+
expr = self.w.ex(Less(Number(a), Number(b)))
|
|
573
|
+
self.assertEqual(eval(expr), result)
|
|
574
|
+
|
|
575
|
+
# a <= b
|
|
576
|
+
result = int(a <= b)
|
|
577
|
+
expr = self.w.ex(LessEqual(Number(a), Number(b)))
|
|
578
|
+
self.assertEqual(eval(expr), result)
|
|
579
|
+
|
|
580
|
+
# a > b
|
|
581
|
+
result = int(a > b)
|
|
582
|
+
expr = self.w.ex(More(Number(a), Number(b)))
|
|
583
|
+
self.assertEqual(eval(expr), result)
|
|
584
|
+
|
|
585
|
+
# a >= b
|
|
586
|
+
result = int(a >= b)
|
|
587
|
+
expr = self.w.ex(MoreEqual(Number(a), Number(b)))
|
|
588
|
+
self.assertEqual(eval(expr), result)
|
|
589
|
+
|
|
590
|
+
# a != b
|
|
591
|
+
result = int(a != b)
|
|
592
|
+
expr = self.w.ex(NotEqual(Number(a), Number(b)))
|
|
593
|
+
self.assertEqual(eval(expr), result)
|
|
594
|
+
|
|
595
|
+
# not(a != b)
|
|
596
|
+
result = int(not (a != b))
|
|
597
|
+
expr = self.w.ex(Not(NotEqual(Number(a), Number(b))))
|
|
598
|
+
self.assertEqual(eval(expr), result)
|
|
599
|
+
|
|
600
|
+
# not(not(a == b))
|
|
601
|
+
result = int(not (not (a == b)))
|
|
602
|
+
expr = self.w.ex(Not(Not(Equal(Number(a), Number(b)))))
|
|
603
|
+
self.assertEqual(eval(expr), result)
|
|
604
|
+
|
|
605
|
+
# (a == b) and (c != d)
|
|
606
|
+
result = int((a == b) and (c != d))
|
|
607
|
+
expr = self.w.ex(
|
|
608
|
+
And(
|
|
609
|
+
Equal(Number(a), Number(b)), NotEqual(Number(c), Number(d))
|
|
610
|
+
)
|
|
611
|
+
)
|
|
612
|
+
self.assertEqual(eval(expr), result)
|
|
613
|
+
|
|
614
|
+
# (d > c) or (b >= a)
|
|
615
|
+
result = int((d > c) or (b >= a))
|
|
616
|
+
expr = self.w.ex(
|
|
617
|
+
Or(More(Number(d), Number(c)), MoreEqual(Number(b), Number(a)))
|
|
618
|
+
)
|
|
619
|
+
self.assertEqual(eval(expr), result)
|
|
620
|
+
|
|
621
|
+
# (d < c) or (b <= a)
|
|
622
|
+
result = int((d < c) or (b <= a))
|
|
623
|
+
expr = self.w.ex(
|
|
624
|
+
Or(Less(Number(d), Number(c)), LessEqual(Number(b), Number(a)))
|
|
625
|
+
)
|
|
626
|
+
self.assertEqual(eval(expr), result)
|
|
627
|
+
|
|
628
|
+
# (a == b) or (c == d)
|
|
629
|
+
result = int((a == b) or (c == d))
|
|
630
|
+
expr = self.w.ex(
|
|
631
|
+
Or(Equal(Number(a), Number(b)), Equal(Number(c), Number(d)))
|
|
632
|
+
)
|
|
633
|
+
self.assertEqual(eval(expr), result)
|
|
634
|
+
|
|
635
|
+
# not(a < b)
|
|
636
|
+
result = int(not (a < b))
|
|
637
|
+
expr = self.w.ex(Not(Less(Number(a), Number(b))))
|
|
638
|
+
self.assertEqual(eval(expr), result)
|
|
639
|
+
|
|
640
|
+
# if(a > b, c, d)
|
|
641
|
+
result = c if (a > b) else d
|
|
642
|
+
expr = self.w.ex(
|
|
643
|
+
If(More(Number(a), Number(b)), Number(c), Number(d))
|
|
644
|
+
)
|
|
645
|
+
self.assertEqual(eval(expr), result)
|
|
646
|
+
|
|
647
|
+
# if(a >= b, c, d)
|
|
648
|
+
result = c if (a >= b) else d
|
|
649
|
+
expr = self.w.ex(
|
|
650
|
+
If(MoreEqual(Number(a), Number(b)), Number(c), Number(d))
|
|
651
|
+
)
|
|
652
|
+
self.assertEqual(eval(expr), result)
|
|
653
|
+
|
|
654
|
+
# if(a < b, c, d)
|
|
655
|
+
result = c if (a < b) else d
|
|
656
|
+
expr = self.w.ex(
|
|
657
|
+
If(Less(Number(a), Number(b)), Number(c), Number(d))
|
|
658
|
+
)
|
|
659
|
+
self.assertEqual(eval(expr), result)
|
|
660
|
+
|
|
661
|
+
# if(a <= b, c, d)
|
|
662
|
+
result = c if (a <= b) else d
|
|
663
|
+
expr = self.w.ex(
|
|
664
|
+
If(LessEqual(Number(a), Number(b)), Number(c), Number(d))
|
|
665
|
+
)
|
|
666
|
+
self.assertEqual(eval(expr), result)
|
|
667
|
+
|
|
668
|
+
# piecewise(a > b, c, d)
|
|
669
|
+
result = c if (a > b) else d
|
|
670
|
+
expr = self.w.ex(
|
|
671
|
+
Piecewise(More(Number(a), Number(b)), Number(c), Number(d))
|
|
672
|
+
)
|
|
673
|
+
self.assertEqual(eval(expr), result)
|
|
674
|
+
|
|
675
|
+
# piecewise(a >= b, c, d)
|
|
676
|
+
result = c if (a >= b) else d
|
|
677
|
+
expr = self.w.ex(
|
|
678
|
+
Piecewise(
|
|
679
|
+
MoreEqual(Number(a), Number(b)), Number(c), Number(d)
|
|
680
|
+
)
|
|
681
|
+
)
|
|
682
|
+
self.assertEqual(eval(expr), result)
|
|
683
|
+
|
|
684
|
+
# piecewise(a < b, c, d)
|
|
685
|
+
result = c if (a < b) else d
|
|
686
|
+
expr = self.w.ex(
|
|
687
|
+
Piecewise(Less(Number(a), Number(b)), Number(c), Number(d))
|
|
688
|
+
)
|
|
689
|
+
self.assertEqual(eval(expr), result)
|
|
690
|
+
|
|
691
|
+
# piecewise(a <= b, c, d)
|
|
692
|
+
result = c if (a <= b) else d
|
|
693
|
+
expr = self.w.ex(
|
|
694
|
+
Piecewise(
|
|
695
|
+
LessEqual(Number(a), Number(b)), Number(c), Number(d)
|
|
696
|
+
)
|
|
697
|
+
)
|
|
698
|
+
self.assertEqual(eval(expr), result)
|
|
699
|
+
|
|
700
|
+
# piecewise(a == b, c, a == d, 3, 4)
|
|
701
|
+
result = c if (a == b) else (3 if (a == d) else 4)
|
|
702
|
+
expr = self.w.ex(
|
|
703
|
+
Piecewise(
|
|
704
|
+
Equal(Number(a), Number(b)),
|
|
705
|
+
Number(c),
|
|
706
|
+
Equal(Number(a), Number(d)),
|
|
707
|
+
Number(3),
|
|
708
|
+
Number(4),
|
|
709
|
+
)
|
|
710
|
+
)
|
|
711
|
+
self.assertEqual(eval(expr), result)
|
|
712
|
+
|
|
713
|
+
# piecewise(a < b, 0, c < d, 0, 5)
|
|
714
|
+
result = 0 if (a < b) else (0 if (c < d) else 5)
|
|
715
|
+
expr = self.w.ex(
|
|
716
|
+
Piecewise(
|
|
717
|
+
Less(Number(a), Number(b)),
|
|
718
|
+
Number(0),
|
|
719
|
+
Less(Number(c), Number(d)),
|
|
720
|
+
Number(0),
|
|
721
|
+
Number(5),
|
|
722
|
+
),
|
|
723
|
+
)
|
|
724
|
+
self.assertEqual(eval(expr), result)
|
|
725
|
+
|
|
726
|
+
|
|
727
|
+
if __name__ == '__main__':
|
|
728
|
+
unittest.main()
|