musica 0.11.1.3__cp39-cp39-macosx_11_0_arm64.whl → 0.12.0__cp39-cp39-macosx_11_0_arm64.whl

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Files changed (54) hide show
  1. musica/CMakeLists.txt +35 -40
  2. musica/__init__.py +51 -3
  3. musica/_musica.cpython-39-darwin.so +0 -0
  4. musica/_version.py +1 -1
  5. musica/binding_common.cpp +16 -0
  6. musica/binding_common.hpp +7 -0
  7. musica/constants.py +3 -0
  8. musica/cpu_binding.cpp +10 -0
  9. musica/cuda.cpp +12 -0
  10. musica/cuda.py +10 -0
  11. musica/gpu_binding.cpp +10 -0
  12. musica/mechanism_configuration/__init__.py +1 -0
  13. musica/mechanism_configuration/aqueous_equilibrium.py +101 -0
  14. musica/mechanism_configuration/arrhenius.py +121 -0
  15. musica/mechanism_configuration/branched.py +116 -0
  16. musica/mechanism_configuration/condensed_phase_arrhenius.py +116 -0
  17. musica/mechanism_configuration/condensed_phase_photolysis.py +91 -0
  18. musica/mechanism_configuration/emission.py +67 -0
  19. musica/mechanism_configuration/first_order_loss.py +67 -0
  20. musica/mechanism_configuration/henrys_law.py +85 -0
  21. musica/mechanism_configuration/mechanism_configuration.py +161 -0
  22. musica/mechanism_configuration/phase.py +43 -0
  23. musica/mechanism_configuration/photolysis.py +83 -0
  24. musica/mechanism_configuration/reactions.py +61 -0
  25. musica/mechanism_configuration/simpol_phase_transfer.py +88 -0
  26. musica/mechanism_configuration/species.py +72 -0
  27. musica/mechanism_configuration/surface.py +89 -0
  28. musica/mechanism_configuration/troe.py +137 -0
  29. musica/mechanism_configuration/tunneling.py +103 -0
  30. musica/mechanism_configuration/user_defined.py +83 -0
  31. musica/mechanism_configuration/utils.py +10 -0
  32. musica/mechanism_configuration/wet_deposition.py +49 -0
  33. musica/mechanism_configuration.cpp +0 -1
  34. musica/musica.cpp +1 -1
  35. musica/test/examples/v1/{full_configuration.json → full_configuration/full_configuration.json} +30 -15
  36. musica/test/examples/v1/{full_configuration.yaml → full_configuration/full_configuration.yaml} +16 -1
  37. musica/test/test_analytical.py +14 -12
  38. musica/test/test_chapman.py +18 -2
  39. musica/test/test_parser.py +4 -640
  40. musica/test/test_serializer.py +69 -0
  41. musica/test/test_util_full_mechanism.py +668 -0
  42. musica/tools/prepare_build_environment_linux.sh +8 -6
  43. musica/tools/repair_wheel_gpu.sh +25 -16
  44. musica/types.py +4 -6
  45. {musica-0.11.1.3.dist-info → musica-0.12.0.dist-info}/METADATA +179 -43
  46. musica-0.12.0.dist-info/RECORD +57 -0
  47. {musica-0.11.1.3.dist-info → musica-0.12.0.dist-info}/WHEEL +1 -1
  48. musica-0.12.0.dist-info/licenses/AUTHORS.md +59 -0
  49. musica/binding.cpp +0 -19
  50. musica/lib/libmusica.a +0 -0
  51. musica/lib/libyaml-cpp.a +0 -0
  52. musica/mechanism_configuration.py +0 -1291
  53. musica-0.11.1.3.dist-info/RECORD +0 -30
  54. {musica-0.11.1.3.dist-info → musica-0.12.0.dist-info}/licenses/LICENSE +0 -0
musica-0.11.1.3.dist-info/RECORD DELETED
@@ -1,30 +0,0 @@
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- musica-0.11.1.3.dist-info/RECORD,,
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- musica-0.11.1.3.dist-info/WHEEL,sha256=rmv32uj_VAuIb6NMlNQHY04iMbuUoTJ905wWlZIPRQk,112
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- musica/musica.cpp,sha256=BBRtL9_Q62ia_vhmpTqpnHHGimPBpCR5YVth8x0i0h4,8399
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- musica/tools/prepare_build_environment_windows.sh,sha256=zMY_RIerqfMC1VlfpZ2KjjDWfBUOvvx8oRNk_jJhmII,826
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- musica/tools/prepare_build_environment_linux.sh,sha256=9rkT0bTVmu9QQqhS6eGRX1HXMQZLfkUGakkC3i5VKec,1466
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- musica/tools/repair_wheel_gpu.sh,sha256=L3jdsUfqiBeulXrkmxiVD0ZjvfdKO7PYjOq1RSyWXFw,1259
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- musica/test/test_parser.py,sha256=vvuy2YJzkh0kc28zCS8vB7x4FYsS06kx0YN_cBFTQQ0,24299
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- musica/test/test_chapman.py,sha256=Wm0wLy6E1Zm8p6cLaICQO9tSy_szMkYn9E7MPCtobno,3070
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- musica/test/tuvx.py,sha256=rWvBcG6cgLJylqkf8M0MFMKT2AkyoaZlGdaKjVSbCR8,116
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- musica/test/test_analytical.py,sha256=3yS61j3uD3d0jhA7kBN5yzA6qoGuGGlnb-UeNH-N-PE,13782
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- musica/test/examples/v1/full_configuration.yaml,sha256=s9Go7AQv9OFQ7zVb1k4wmDj2vpHYzVCTRqi8JZTHlUM,5235
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- musica/test/examples/v1/full_configuration.json,sha256=7AqPhTHodSjtV8LOPoUsA9MtCu_Xc28RVOlhNGPI9GQ,8807
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- musica/test/examples/v0/species.json,sha256=xKTcwh9QV9sRjLPK9GvGEnatBrRPbP857NmPG0bCXqU,565
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- musica/test/examples/v0/species.yaml,sha256=vUYTs7bp2AYVWHDgXBFxnCkmqdO6ysJ_ulOQTAoKa1M,283
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- musica/test/examples/v0/config.json,sha256=7s6g5jxH2GiEiRcZmO13IJ5k4walg1C9t-dQr9o45U4,79
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- musica/test/examples/v0/config.yaml,sha256=GgA18mP8ZCzOdY-AlAePK48M05PJFPeWCk-IfrPN_VE,44
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- musica/test/examples/v0/reactions.json,sha256=7WJhItBPtGu89vLcPMK6izW8BvwUAIjfzqwjtDmfPPg,4188
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- musica/test/examples/v0/reactions.yaml,sha256=uEuQOz5i7vGyn0G7KsmdWv23V2Gn0QUmexrK030CFlo,2266
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- musica/lib/libyaml-cpp.a,sha256=tBqVhg4X-YD5FatiTr7BuIwhR5r31LdIith-Ycukw5E,795856
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- musica/lib/libmusica.a,sha256=vRkJaW26YIQz5a6no-Z-kXUDUBqg_N9Jf3D-s_46STM,1355336