multiscoresplot 1.0.0__py3-none-any.whl

multiscoresplot-1.0.0.dist-info/METADATA

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+Metadata-Version: 2.4
+Name: multiscoresplot
+Version: 1.0.0
+Summary: Multi-dimensional gene set scoring and visualization for single-cell transcriptomics
+Project-URL: Homepage, https://github.com/andrecmacedo/multiscoresplot
+Project-URL: Repository, https://github.com/andrecmacedo/multiscoresplot
+Project-URL: Issues, https://github.com/andrecmacedo/multiscoresplot/issues
+Author: Andre Macedo
+License-Expression: MIT
+License-File: LICENSE
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: MIT License
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
+Classifier: Topic :: Scientific/Engineering :: Visualization
+Classifier: Typing :: Typed
+Requires-Python: >=3.10
+Requires-Dist: anndata>=0.10
+Requires-Dist: matplotlib>=3.7
+Requires-Dist: numpy>=1.24
+Requires-Dist: pyucell>=0.5
+Requires-Dist: scanpy>=1.9
+Requires-Dist: scikit-learn>=1.3
+Provides-Extra: interactive
+Requires-Dist: plotly>=5.0; extra == 'interactive'
+Description-Content-Type: text/markdown
+
+# multiscoresplot
+
+[![CI](https://github.com/andrecmacedo/multiscoresplot/actions/workflows/ci.yml/badge.svg)](https://github.com/andrecmacedo/multiscoresplot/actions/workflows/ci.yml)
+[![PyPI](https://img.shields.io/pypi/v/multiscoresplot)](https://pypi.org/project/multiscoresplot/)
+[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
+
+Multi-dimensional gene set scoring and visualization for single-cell transcriptomics.
+
+Color dimensionality reduction plots (UMAP, PCA, etc.) using a multi-dimensional color space derived from gene set scores.
+
+## Installation
+
+```bash
+pip install multiscoresplot
+```
+
+## Quick Start
+
+```python
+import multiscoresplot  # more to come!
+```
+
+## Pipeline
+
+1. **Score** -- Calculate gene set scores per cell
+2. **Color space** -- Build a color space where each axis/vertex maps to a gene set
+3. **Project** -- Map each cell into the color space based on its scores
+4. **Plot** -- Color dimensionality reduction coordinates using the projected colors
+5. **Legend** -- Render a simplex/ternary plot as the colorbar
+
+## Development
+
+```bash
+# Install in editable mode with all dev dependencies
+pip install -e ".[dev,test,type]"
+
+# Run tests
+pytest
+
+# Lint & format
+ruff check src/ tests/
+ruff format src/ tests/
+
+# Type check
+mypy src/
+
+# Set up pre-commit hooks
+pre-commit install
+```
+
+## License
+
+[MIT](LICENSE)

multiscoresplot-1.0.0.dist-info/RECORD

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multiscoresplot-1.0.0.dist-info/WHEEL

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+Wheel-Version: 1.0
+Generator: hatchling 1.29.0
+Root-Is-Purelib: true
+Tag: py3-none-any

multiscoresplot-1.0.0.dist-info/licenses/LICENSE

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+MIT License
+
+Copyright (c) 2026 Andre Macedo
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.