multipers 2.3.5b2__cp311-cp311-win_amd64.whl → 2.3.5b3__cp311-cp311-win_amd64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Potentially problematic release.
This version of multipers might be problematic. Click here for more details.
- multipers/array_api/numpy.py +2 -0
- multipers/array_api/torch.py +2 -0
- multipers/function_rips.cp311-win_amd64.pyd +0 -0
- multipers/grids.cp311-win_amd64.pyd +0 -0
- multipers/io.cp311-win_amd64.pyd +0 -0
- multipers/io.pyx +80 -305
- multipers/mma_structures.cp311-win_amd64.pyd +0 -0
- multipers/multiparameter_module_approximation.cp311-win_amd64.pyd +0 -0
- multipers/plots.py +2 -1
- multipers/point_measure.cp311-win_amd64.pyd +0 -0
- multipers/simplex_tree_multi.cp311-win_amd64.pyd +0 -0
- multipers/slicer.cp311-win_amd64.pyd +0 -0
- multipers/slicer.pxd +20 -20
- multipers/slicer.pyx +71 -111
- multipers/slicer.pyx.tp +18 -19
- {multipers-2.3.5b2.dist-info → multipers-2.3.5b3.dist-info}/METADATA +1 -1
- {multipers-2.3.5b2.dist-info → multipers-2.3.5b3.dist-info}/RECORD +20 -20
- {multipers-2.3.5b2.dist-info → multipers-2.3.5b3.dist-info}/WHEEL +0 -0
- {multipers-2.3.5b2.dist-info → multipers-2.3.5b3.dist-info}/licenses/LICENSE +0 -0
- {multipers-2.3.5b2.dist-info → multipers-2.3.5b3.dist-info}/top_level.txt +0 -0
multipers/slicer.pyx
CHANGED
|
@@ -811,7 +811,6 @@ cdef class _KSlicer_Matrix0_vine_i32:
|
|
|
811
811
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
812
812
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
813
813
|
bool vineyard=True,
|
|
814
|
-
id :Optional[str] = None,
|
|
815
814
|
dtype = np.int32,
|
|
816
815
|
**minpres_kwargs
|
|
817
816
|
)->Slicer_type:
|
|
@@ -819,7 +818,7 @@ cdef class _KSlicer_Matrix0_vine_i32:
|
|
|
819
818
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
820
819
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
821
820
|
"""
|
|
822
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
821
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
823
822
|
return new_slicer
|
|
824
823
|
|
|
825
824
|
@property
|
|
@@ -1313,7 +1312,6 @@ cdef class _KSlicer_Matrix1_vine_i32:
|
|
|
1313
1312
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
1314
1313
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
1315
1314
|
bool vineyard=True,
|
|
1316
|
-
id :Optional[str] = None,
|
|
1317
1315
|
dtype = np.int32,
|
|
1318
1316
|
**minpres_kwargs
|
|
1319
1317
|
)->Slicer_type:
|
|
@@ -1321,7 +1319,7 @@ cdef class _KSlicer_Matrix1_vine_i32:
|
|
|
1321
1319
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
1322
1320
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
1323
1321
|
"""
|
|
1324
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
1322
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
1325
1323
|
return new_slicer
|
|
1326
1324
|
|
|
1327
1325
|
@property
|
|
@@ -1815,7 +1813,6 @@ cdef class _KSlicer_Matrix0_vine_i64:
|
|
|
1815
1813
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
1816
1814
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
1817
1815
|
bool vineyard=True,
|
|
1818
|
-
id :Optional[str] = None,
|
|
1819
1816
|
dtype = np.int64,
|
|
1820
1817
|
**minpres_kwargs
|
|
1821
1818
|
)->Slicer_type:
|
|
@@ -1823,7 +1820,7 @@ cdef class _KSlicer_Matrix0_vine_i64:
|
|
|
1823
1820
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
1824
1821
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
1825
1822
|
"""
|
|
1826
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
1823
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
1827
1824
|
return new_slicer
|
|
1828
1825
|
|
|
1829
1826
|
@property
|
|
@@ -2317,7 +2314,6 @@ cdef class _KSlicer_Matrix1_vine_i64:
|
|
|
2317
2314
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
2318
2315
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
2319
2316
|
bool vineyard=True,
|
|
2320
|
-
id :Optional[str] = None,
|
|
2321
2317
|
dtype = np.int64,
|
|
2322
2318
|
**minpres_kwargs
|
|
2323
2319
|
)->Slicer_type:
|
|
@@ -2325,7 +2321,7 @@ cdef class _KSlicer_Matrix1_vine_i64:
|
|
|
2325
2321
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
2326
2322
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
2327
2323
|
"""
|
|
2328
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
2324
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
2329
2325
|
return new_slicer
|
|
2330
2326
|
|
|
2331
2327
|
@property
|
|
@@ -2816,7 +2812,6 @@ cdef class _KSlicer_Matrix0_vine_f32:
|
|
|
2816
2812
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
2817
2813
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
2818
2814
|
bool vineyard=True,
|
|
2819
|
-
id :Optional[str] = None,
|
|
2820
2815
|
dtype = np.float32,
|
|
2821
2816
|
**minpres_kwargs
|
|
2822
2817
|
)->Slicer_type:
|
|
@@ -2824,7 +2819,7 @@ cdef class _KSlicer_Matrix0_vine_f32:
|
|
|
2824
2819
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
2825
2820
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
2826
2821
|
"""
|
|
2827
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
2822
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
2828
2823
|
return new_slicer
|
|
2829
2824
|
|
|
2830
2825
|
@property
|
|
@@ -3315,7 +3310,6 @@ cdef class _KSlicer_Matrix1_vine_f32:
|
|
|
3315
3310
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
3316
3311
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
3317
3312
|
bool vineyard=True,
|
|
3318
|
-
id :Optional[str] = None,
|
|
3319
3313
|
dtype = np.float32,
|
|
3320
3314
|
**minpres_kwargs
|
|
3321
3315
|
)->Slicer_type:
|
|
@@ -3323,7 +3317,7 @@ cdef class _KSlicer_Matrix1_vine_f32:
|
|
|
3323
3317
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
3324
3318
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
3325
3319
|
"""
|
|
3326
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
3320
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
3327
3321
|
return new_slicer
|
|
3328
3322
|
|
|
3329
3323
|
@property
|
|
@@ -3814,7 +3808,6 @@ cdef class _KSlicer_Matrix0_vine_f64:
|
|
|
3814
3808
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
3815
3809
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
3816
3810
|
bool vineyard=True,
|
|
3817
|
-
id :Optional[str] = None,
|
|
3818
3811
|
dtype = np.float64,
|
|
3819
3812
|
**minpres_kwargs
|
|
3820
3813
|
)->Slicer_type:
|
|
@@ -3822,7 +3815,7 @@ cdef class _KSlicer_Matrix0_vine_f64:
|
|
|
3822
3815
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
3823
3816
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
3824
3817
|
"""
|
|
3825
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
3818
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
3826
3819
|
return new_slicer
|
|
3827
3820
|
|
|
3828
3821
|
@property
|
|
@@ -4313,7 +4306,6 @@ cdef class _KSlicer_Matrix1_vine_f64:
|
|
|
4313
4306
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
4314
4307
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
4315
4308
|
bool vineyard=True,
|
|
4316
|
-
id :Optional[str] = None,
|
|
4317
4309
|
dtype = np.float64,
|
|
4318
4310
|
**minpres_kwargs
|
|
4319
4311
|
)->Slicer_type:
|
|
@@ -4321,7 +4313,7 @@ cdef class _KSlicer_Matrix1_vine_f64:
|
|
|
4321
4313
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
4322
4314
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
4323
4315
|
"""
|
|
4324
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
4316
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
4325
4317
|
return new_slicer
|
|
4326
4318
|
|
|
4327
4319
|
@property
|
|
@@ -4835,7 +4827,6 @@ cdef class _Slicer_Matrix0_vine_i32:
|
|
|
4835
4827
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
4836
4828
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
4837
4829
|
bool vineyard=True,
|
|
4838
|
-
id :Optional[str] = None,
|
|
4839
4830
|
dtype = np.int32,
|
|
4840
4831
|
**minpres_kwargs
|
|
4841
4832
|
)->Slicer_type:
|
|
@@ -4843,7 +4834,7 @@ cdef class _Slicer_Matrix0_vine_i32:
|
|
|
4843
4834
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
4844
4835
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
4845
4836
|
"""
|
|
4846
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
4837
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
4847
4838
|
return new_slicer
|
|
4848
4839
|
|
|
4849
4840
|
@property
|
|
@@ -5377,7 +5368,6 @@ cdef class _Slicer_Matrix1_vine_i32:
|
|
|
5377
5368
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
5378
5369
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
5379
5370
|
bool vineyard=True,
|
|
5380
|
-
id :Optional[str] = None,
|
|
5381
5371
|
dtype = np.int32,
|
|
5382
5372
|
**minpres_kwargs
|
|
5383
5373
|
)->Slicer_type:
|
|
@@ -5385,7 +5375,7 @@ cdef class _Slicer_Matrix1_vine_i32:
|
|
|
5385
5375
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
5386
5376
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
5387
5377
|
"""
|
|
5388
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
5378
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
5389
5379
|
return new_slicer
|
|
5390
5380
|
|
|
5391
5381
|
@property
|
|
@@ -5919,7 +5909,6 @@ cdef class _Slicer_Matrix0_vine_i64:
|
|
|
5919
5909
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
5920
5910
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
5921
5911
|
bool vineyard=True,
|
|
5922
|
-
id :Optional[str] = None,
|
|
5923
5912
|
dtype = np.int64,
|
|
5924
5913
|
**minpres_kwargs
|
|
5925
5914
|
)->Slicer_type:
|
|
@@ -5927,7 +5916,7 @@ cdef class _Slicer_Matrix0_vine_i64:
|
|
|
5927
5916
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
5928
5917
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
5929
5918
|
"""
|
|
5930
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
5919
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
5931
5920
|
return new_slicer
|
|
5932
5921
|
|
|
5933
5922
|
@property
|
|
@@ -6461,7 +6450,6 @@ cdef class _Slicer_Matrix1_vine_i64:
|
|
|
6461
6450
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
6462
6451
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
6463
6452
|
bool vineyard=True,
|
|
6464
|
-
id :Optional[str] = None,
|
|
6465
6453
|
dtype = np.int64,
|
|
6466
6454
|
**minpres_kwargs
|
|
6467
6455
|
)->Slicer_type:
|
|
@@ -6469,7 +6457,7 @@ cdef class _Slicer_Matrix1_vine_i64:
|
|
|
6469
6457
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
6470
6458
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
6471
6459
|
"""
|
|
6472
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
6460
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
6473
6461
|
return new_slicer
|
|
6474
6462
|
|
|
6475
6463
|
@property
|
|
@@ -7000,7 +6988,6 @@ cdef class _Slicer_Matrix0_vine_f32:
|
|
|
7000
6988
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
7001
6989
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
7002
6990
|
bool vineyard=True,
|
|
7003
|
-
id :Optional[str] = None,
|
|
7004
6991
|
dtype = np.float32,
|
|
7005
6992
|
**minpres_kwargs
|
|
7006
6993
|
)->Slicer_type:
|
|
@@ -7008,7 +6995,7 @@ cdef class _Slicer_Matrix0_vine_f32:
|
|
|
7008
6995
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
7009
6996
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
7010
6997
|
"""
|
|
7011
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
6998
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
7012
6999
|
return new_slicer
|
|
7013
7000
|
|
|
7014
7001
|
@property
|
|
@@ -7539,7 +7526,6 @@ cdef class _Slicer_Matrix1_vine_f32:
|
|
|
7539
7526
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
7540
7527
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
7541
7528
|
bool vineyard=True,
|
|
7542
|
-
id :Optional[str] = None,
|
|
7543
7529
|
dtype = np.float32,
|
|
7544
7530
|
**minpres_kwargs
|
|
7545
7531
|
)->Slicer_type:
|
|
@@ -7547,7 +7533,7 @@ cdef class _Slicer_Matrix1_vine_f32:
|
|
|
7547
7533
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
7548
7534
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
7549
7535
|
"""
|
|
7550
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
7536
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
7551
7537
|
return new_slicer
|
|
7552
7538
|
|
|
7553
7539
|
@property
|
|
@@ -8078,7 +8064,6 @@ cdef class _Slicer_Matrix0_vine_f64:
|
|
|
8078
8064
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
8079
8065
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
8080
8066
|
bool vineyard=True,
|
|
8081
|
-
id :Optional[str] = None,
|
|
8082
8067
|
dtype = np.float64,
|
|
8083
8068
|
**minpres_kwargs
|
|
8084
8069
|
)->Slicer_type:
|
|
@@ -8086,7 +8071,7 @@ cdef class _Slicer_Matrix0_vine_f64:
|
|
|
8086
8071
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
8087
8072
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
8088
8073
|
"""
|
|
8089
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
8074
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
8090
8075
|
return new_slicer
|
|
8091
8076
|
|
|
8092
8077
|
@property
|
|
@@ -8617,7 +8602,6 @@ cdef class _Slicer_Matrix1_vine_f64:
|
|
|
8617
8602
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
8618
8603
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
8619
8604
|
bool vineyard=True,
|
|
8620
|
-
id :Optional[str] = None,
|
|
8621
8605
|
dtype = np.float64,
|
|
8622
8606
|
**minpres_kwargs
|
|
8623
8607
|
)->Slicer_type:
|
|
@@ -8625,7 +8609,7 @@ cdef class _Slicer_Matrix1_vine_f64:
|
|
|
8625
8609
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
8626
8610
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
8627
8611
|
"""
|
|
8628
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
8612
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
8629
8613
|
return new_slicer
|
|
8630
8614
|
|
|
8631
8615
|
@property
|
|
@@ -9139,7 +9123,6 @@ cdef class _KSlicer_Matrix0_i32:
|
|
|
9139
9123
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
9140
9124
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
9141
9125
|
bool vineyard=False,
|
|
9142
|
-
id :Optional[str] = None,
|
|
9143
9126
|
dtype = np.int32,
|
|
9144
9127
|
**minpres_kwargs
|
|
9145
9128
|
)->Slicer_type:
|
|
@@ -9147,7 +9130,7 @@ cdef class _KSlicer_Matrix0_i32:
|
|
|
9147
9130
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
9148
9131
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
9149
9132
|
"""
|
|
9150
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
9133
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
9151
9134
|
return new_slicer
|
|
9152
9135
|
|
|
9153
9136
|
@property
|
|
@@ -9623,7 +9606,6 @@ cdef class _KSlicer_Matrix1_i32:
|
|
|
9623
9606
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
9624
9607
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
9625
9608
|
bool vineyard=False,
|
|
9626
|
-
id :Optional[str] = None,
|
|
9627
9609
|
dtype = np.int32,
|
|
9628
9610
|
**minpres_kwargs
|
|
9629
9611
|
)->Slicer_type:
|
|
@@ -9631,7 +9613,7 @@ cdef class _KSlicer_Matrix1_i32:
|
|
|
9631
9613
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
9632
9614
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
9633
9615
|
"""
|
|
9634
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
9616
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
9635
9617
|
return new_slicer
|
|
9636
9618
|
|
|
9637
9619
|
@property
|
|
@@ -10107,7 +10089,6 @@ cdef class _KSlicer_Matrix0_i64:
|
|
|
10107
10089
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
10108
10090
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
10109
10091
|
bool vineyard=False,
|
|
10110
|
-
id :Optional[str] = None,
|
|
10111
10092
|
dtype = np.int64,
|
|
10112
10093
|
**minpres_kwargs
|
|
10113
10094
|
)->Slicer_type:
|
|
@@ -10115,7 +10096,7 @@ cdef class _KSlicer_Matrix0_i64:
|
|
|
10115
10096
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
10116
10097
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
10117
10098
|
"""
|
|
10118
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
10099
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
10119
10100
|
return new_slicer
|
|
10120
10101
|
|
|
10121
10102
|
@property
|
|
@@ -10591,7 +10572,6 @@ cdef class _KSlicer_Matrix1_i64:
|
|
|
10591
10572
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
10592
10573
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
10593
10574
|
bool vineyard=False,
|
|
10594
|
-
id :Optional[str] = None,
|
|
10595
10575
|
dtype = np.int64,
|
|
10596
10576
|
**minpres_kwargs
|
|
10597
10577
|
)->Slicer_type:
|
|
@@ -10599,7 +10579,7 @@ cdef class _KSlicer_Matrix1_i64:
|
|
|
10599
10579
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
10600
10580
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
10601
10581
|
"""
|
|
10602
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
10582
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
10603
10583
|
return new_slicer
|
|
10604
10584
|
|
|
10605
10585
|
@property
|
|
@@ -11072,7 +11052,6 @@ cdef class _KSlicer_Matrix0_f32:
|
|
|
11072
11052
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
11073
11053
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
11074
11054
|
bool vineyard=False,
|
|
11075
|
-
id :Optional[str] = None,
|
|
11076
11055
|
dtype = np.float32,
|
|
11077
11056
|
**minpres_kwargs
|
|
11078
11057
|
)->Slicer_type:
|
|
@@ -11080,7 +11059,7 @@ cdef class _KSlicer_Matrix0_f32:
|
|
|
11080
11059
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
11081
11060
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
11082
11061
|
"""
|
|
11083
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
11062
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
11084
11063
|
return new_slicer
|
|
11085
11064
|
|
|
11086
11065
|
@property
|
|
@@ -11553,7 +11532,6 @@ cdef class _KSlicer_Matrix1_f32:
|
|
|
11553
11532
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
11554
11533
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
11555
11534
|
bool vineyard=False,
|
|
11556
|
-
id :Optional[str] = None,
|
|
11557
11535
|
dtype = np.float32,
|
|
11558
11536
|
**minpres_kwargs
|
|
11559
11537
|
)->Slicer_type:
|
|
@@ -11561,7 +11539,7 @@ cdef class _KSlicer_Matrix1_f32:
|
|
|
11561
11539
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
11562
11540
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
11563
11541
|
"""
|
|
11564
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
11542
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
11565
11543
|
return new_slicer
|
|
11566
11544
|
|
|
11567
11545
|
@property
|
|
@@ -12034,7 +12012,6 @@ cdef class _KSlicer_Matrix0_f64:
|
|
|
12034
12012
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
12035
12013
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
12036
12014
|
bool vineyard=False,
|
|
12037
|
-
id :Optional[str] = None,
|
|
12038
12015
|
dtype = np.float64,
|
|
12039
12016
|
**minpres_kwargs
|
|
12040
12017
|
)->Slicer_type:
|
|
@@ -12042,7 +12019,7 @@ cdef class _KSlicer_Matrix0_f64:
|
|
|
12042
12019
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
12043
12020
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
12044
12021
|
"""
|
|
12045
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
12022
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
12046
12023
|
return new_slicer
|
|
12047
12024
|
|
|
12048
12025
|
@property
|
|
@@ -12515,7 +12492,6 @@ cdef class _KSlicer_Matrix1_f64:
|
|
|
12515
12492
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
12516
12493
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
12517
12494
|
bool vineyard=False,
|
|
12518
|
-
id :Optional[str] = None,
|
|
12519
12495
|
dtype = np.float64,
|
|
12520
12496
|
**minpres_kwargs
|
|
12521
12497
|
)->Slicer_type:
|
|
@@ -12523,7 +12499,7 @@ cdef class _KSlicer_Matrix1_f64:
|
|
|
12523
12499
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
12524
12500
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
12525
12501
|
"""
|
|
12526
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
12502
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
12527
12503
|
return new_slicer
|
|
12528
12504
|
|
|
12529
12505
|
@property
|
|
@@ -13019,7 +12995,6 @@ cdef class _Slicer_Matrix0_i32:
|
|
|
13019
12995
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
13020
12996
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
13021
12997
|
bool vineyard=False,
|
|
13022
|
-
id :Optional[str] = None,
|
|
13023
12998
|
dtype = np.int32,
|
|
13024
12999
|
**minpres_kwargs
|
|
13025
13000
|
)->Slicer_type:
|
|
@@ -13027,7 +13002,7 @@ cdef class _Slicer_Matrix0_i32:
|
|
|
13027
13002
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
13028
13003
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
13029
13004
|
"""
|
|
13030
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
13005
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
13031
13006
|
return new_slicer
|
|
13032
13007
|
|
|
13033
13008
|
@property
|
|
@@ -13543,7 +13518,6 @@ cdef class _Slicer_Matrix1_i32:
|
|
|
13543
13518
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
13544
13519
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
13545
13520
|
bool vineyard=False,
|
|
13546
|
-
id :Optional[str] = None,
|
|
13547
13521
|
dtype = np.int32,
|
|
13548
13522
|
**minpres_kwargs
|
|
13549
13523
|
)->Slicer_type:
|
|
@@ -13551,7 +13525,7 @@ cdef class _Slicer_Matrix1_i32:
|
|
|
13551
13525
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
13552
13526
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
13553
13527
|
"""
|
|
13554
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
13528
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
13555
13529
|
return new_slicer
|
|
13556
13530
|
|
|
13557
13531
|
@property
|
|
@@ -14067,7 +14041,6 @@ cdef class _Slicer_Matrix0_i64:
|
|
|
14067
14041
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
14068
14042
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
14069
14043
|
bool vineyard=False,
|
|
14070
|
-
id :Optional[str] = None,
|
|
14071
14044
|
dtype = np.int64,
|
|
14072
14045
|
**minpres_kwargs
|
|
14073
14046
|
)->Slicer_type:
|
|
@@ -14075,7 +14048,7 @@ cdef class _Slicer_Matrix0_i64:
|
|
|
14075
14048
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
14076
14049
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
14077
14050
|
"""
|
|
14078
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
14051
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
14079
14052
|
return new_slicer
|
|
14080
14053
|
|
|
14081
14054
|
@property
|
|
@@ -14591,7 +14564,6 @@ cdef class _Slicer_Matrix1_i64:
|
|
|
14591
14564
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
14592
14565
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
14593
14566
|
bool vineyard=False,
|
|
14594
|
-
id :Optional[str] = None,
|
|
14595
14567
|
dtype = np.int64,
|
|
14596
14568
|
**minpres_kwargs
|
|
14597
14569
|
)->Slicer_type:
|
|
@@ -14599,7 +14571,7 @@ cdef class _Slicer_Matrix1_i64:
|
|
|
14599
14571
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
14600
14572
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
14601
14573
|
"""
|
|
14602
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
14574
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
14603
14575
|
return new_slicer
|
|
14604
14576
|
|
|
14605
14577
|
@property
|
|
@@ -15112,7 +15084,6 @@ cdef class _Slicer_Matrix0_f32:
|
|
|
15112
15084
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
15113
15085
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
15114
15086
|
bool vineyard=False,
|
|
15115
|
-
id :Optional[str] = None,
|
|
15116
15087
|
dtype = np.float32,
|
|
15117
15088
|
**minpres_kwargs
|
|
15118
15089
|
)->Slicer_type:
|
|
@@ -15120,7 +15091,7 @@ cdef class _Slicer_Matrix0_f32:
|
|
|
15120
15091
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
15121
15092
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
15122
15093
|
"""
|
|
15123
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
15094
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
15124
15095
|
return new_slicer
|
|
15125
15096
|
|
|
15126
15097
|
@property
|
|
@@ -15633,7 +15604,6 @@ cdef class _Slicer_Matrix1_f32:
|
|
|
15633
15604
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
15634
15605
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
15635
15606
|
bool vineyard=False,
|
|
15636
|
-
id :Optional[str] = None,
|
|
15637
15607
|
dtype = np.float32,
|
|
15638
15608
|
**minpres_kwargs
|
|
15639
15609
|
)->Slicer_type:
|
|
@@ -15641,7 +15611,7 @@ cdef class _Slicer_Matrix1_f32:
|
|
|
15641
15611
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
15642
15612
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
15643
15613
|
"""
|
|
15644
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
15614
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
15645
15615
|
return new_slicer
|
|
15646
15616
|
|
|
15647
15617
|
@property
|
|
@@ -16154,7 +16124,6 @@ cdef class _Slicer_Matrix0_f64:
|
|
|
16154
16124
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
16155
16125
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
16156
16126
|
bool vineyard=False,
|
|
16157
|
-
id :Optional[str] = None,
|
|
16158
16127
|
dtype = np.float64,
|
|
16159
16128
|
**minpres_kwargs
|
|
16160
16129
|
)->Slicer_type:
|
|
@@ -16162,7 +16131,7 @@ cdef class _Slicer_Matrix0_f64:
|
|
|
16162
16131
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
16163
16132
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
16164
16133
|
"""
|
|
16165
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
16134
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
16166
16135
|
return new_slicer
|
|
16167
16136
|
|
|
16168
16137
|
@property
|
|
@@ -16675,7 +16644,6 @@ cdef class _Slicer_Matrix1_f64:
|
|
|
16675
16644
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
16676
16645
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
16677
16646
|
bool vineyard=False,
|
|
16678
|
-
id :Optional[str] = None,
|
|
16679
16647
|
dtype = np.float64,
|
|
16680
16648
|
**minpres_kwargs
|
|
16681
16649
|
)->Slicer_type:
|
|
@@ -16683,7 +16651,7 @@ cdef class _Slicer_Matrix1_f64:
|
|
|
16683
16651
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
16684
16652
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
16685
16653
|
"""
|
|
16686
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
16654
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
16687
16655
|
return new_slicer
|
|
16688
16656
|
|
|
16689
16657
|
@property
|
|
@@ -17179,7 +17147,6 @@ cdef class _KSlicer_GudhiCohomology0_i32:
|
|
|
17179
17147
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
17180
17148
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
17181
17149
|
bool vineyard=False,
|
|
17182
|
-
id :Optional[str] = None,
|
|
17183
17150
|
dtype = np.int32,
|
|
17184
17151
|
**minpres_kwargs
|
|
17185
17152
|
)->Slicer_type:
|
|
@@ -17187,7 +17154,7 @@ cdef class _KSlicer_GudhiCohomology0_i32:
|
|
|
17187
17154
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
17188
17155
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
17189
17156
|
"""
|
|
17190
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
17157
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
17191
17158
|
return new_slicer
|
|
17192
17159
|
|
|
17193
17160
|
@property
|
|
@@ -17663,7 +17630,6 @@ cdef class _KSlicer_GudhiCohomology0_i64:
|
|
|
17663
17630
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
17664
17631
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
17665
17632
|
bool vineyard=False,
|
|
17666
|
-
id :Optional[str] = None,
|
|
17667
17633
|
dtype = np.int64,
|
|
17668
17634
|
**minpres_kwargs
|
|
17669
17635
|
)->Slicer_type:
|
|
@@ -17671,7 +17637,7 @@ cdef class _KSlicer_GudhiCohomology0_i64:
|
|
|
17671
17637
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
17672
17638
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
17673
17639
|
"""
|
|
17674
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
17640
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
17675
17641
|
return new_slicer
|
|
17676
17642
|
|
|
17677
17643
|
@property
|
|
@@ -18144,7 +18110,6 @@ cdef class _KSlicer_GudhiCohomology0_f32:
|
|
|
18144
18110
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
18145
18111
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
18146
18112
|
bool vineyard=False,
|
|
18147
|
-
id :Optional[str] = None,
|
|
18148
18113
|
dtype = np.float32,
|
|
18149
18114
|
**minpres_kwargs
|
|
18150
18115
|
)->Slicer_type:
|
|
@@ -18152,7 +18117,7 @@ cdef class _KSlicer_GudhiCohomology0_f32:
|
|
|
18152
18117
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
18153
18118
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
18154
18119
|
"""
|
|
18155
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
18120
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
18156
18121
|
return new_slicer
|
|
18157
18122
|
|
|
18158
18123
|
@property
|
|
@@ -18625,7 +18590,6 @@ cdef class _KSlicer_GudhiCohomology0_f64:
|
|
|
18625
18590
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
18626
18591
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
18627
18592
|
bool vineyard=False,
|
|
18628
|
-
id :Optional[str] = None,
|
|
18629
18593
|
dtype = np.float64,
|
|
18630
18594
|
**minpres_kwargs
|
|
18631
18595
|
)->Slicer_type:
|
|
@@ -18633,7 +18597,7 @@ cdef class _KSlicer_GudhiCohomology0_f64:
|
|
|
18633
18597
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
18634
18598
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
18635
18599
|
"""
|
|
18636
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
18600
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
18637
18601
|
return new_slicer
|
|
18638
18602
|
|
|
18639
18603
|
@property
|
|
@@ -19129,7 +19093,6 @@ cdef class _Slicer_GudhiCohomology0_i32:
|
|
|
19129
19093
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
19130
19094
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
19131
19095
|
bool vineyard=False,
|
|
19132
|
-
id :Optional[str] = None,
|
|
19133
19096
|
dtype = np.int32,
|
|
19134
19097
|
**minpres_kwargs
|
|
19135
19098
|
)->Slicer_type:
|
|
@@ -19137,7 +19100,7 @@ cdef class _Slicer_GudhiCohomology0_i32:
|
|
|
19137
19100
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
19138
19101
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
19139
19102
|
"""
|
|
19140
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
19103
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
19141
19104
|
return new_slicer
|
|
19142
19105
|
|
|
19143
19106
|
@property
|
|
@@ -19653,7 +19616,6 @@ cdef class _Slicer_GudhiCohomology0_i64:
|
|
|
19653
19616
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
19654
19617
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
19655
19618
|
bool vineyard=False,
|
|
19656
|
-
id :Optional[str] = None,
|
|
19657
19619
|
dtype = np.int64,
|
|
19658
19620
|
**minpres_kwargs
|
|
19659
19621
|
)->Slicer_type:
|
|
@@ -19661,7 +19623,7 @@ cdef class _Slicer_GudhiCohomology0_i64:
|
|
|
19661
19623
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
19662
19624
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
19663
19625
|
"""
|
|
19664
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
19626
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
19665
19627
|
return new_slicer
|
|
19666
19628
|
|
|
19667
19629
|
@property
|
|
@@ -20174,7 +20136,6 @@ cdef class _Slicer_GudhiCohomology0_f32:
|
|
|
20174
20136
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
20175
20137
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
20176
20138
|
bool vineyard=False,
|
|
20177
|
-
id :Optional[str] = None,
|
|
20178
20139
|
dtype = np.float32,
|
|
20179
20140
|
**minpres_kwargs
|
|
20180
20141
|
)->Slicer_type:
|
|
@@ -20182,7 +20143,7 @@ cdef class _Slicer_GudhiCohomology0_f32:
|
|
|
20182
20143
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
20183
20144
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
20184
20145
|
"""
|
|
20185
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
20146
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
20186
20147
|
return new_slicer
|
|
20187
20148
|
|
|
20188
20149
|
@property
|
|
@@ -20695,7 +20656,6 @@ cdef class _Slicer_GudhiCohomology0_f64:
|
|
|
20695
20656
|
str backend:Literal["mpfree", "2pac"]="mpfree",
|
|
20696
20657
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
20697
20658
|
bool vineyard=False,
|
|
20698
|
-
id :Optional[str] = None,
|
|
20699
20659
|
dtype = np.float64,
|
|
20700
20660
|
**minpres_kwargs
|
|
20701
20661
|
)->Slicer_type:
|
|
@@ -20703,7 +20663,7 @@ cdef class _Slicer_GudhiCohomology0_f64:
|
|
|
20703
20663
|
Computes the minimal presentation of the slicer, and returns it as a new slicer.
|
|
20704
20664
|
See :func:`multipers.slicer.minimal_presentation`.
|
|
20705
20665
|
"""
|
|
20706
|
-
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard,
|
|
20666
|
+
new_slicer = minimal_presentation(self, degree=degree, degrees=degrees, backend=backend, slicer_backend=slicer_backend, dtype=dtype, vineyard=vineyard, **minpres_kwargs)
|
|
20707
20667
|
return new_slicer
|
|
20708
20668
|
|
|
20709
20669
|
@property
|
|
@@ -20777,7 +20737,7 @@ cdef extern from "gudhi/cubical_to_boundary.h" namespace "":
|
|
|
20777
20737
|
void _to_boundary(const vector[unsigned int]&, vector[vector[unsigned int]]&, vector[int]&) except + nogil
|
|
20778
20738
|
void get_vertices(unsigned int, cset[unsigned int]&, const vector[vector[unsigned int]]&) nogil
|
|
20779
20739
|
|
|
20780
|
-
def
|
|
20740
|
+
def _from_bitmapi32(image, **slicer_kwargs):
|
|
20781
20741
|
from multipers import Slicer
|
|
20782
20742
|
dtype = slicer_kwargs.get("dtype", image.dtype)
|
|
20783
20743
|
slicer_kwargs["dtype"] = dtype
|
|
@@ -20795,9 +20755,9 @@ def _from_bitmapf64(image, **slicer_kwargs):
|
|
|
20795
20755
|
cdef cset[unsigned int] vertices
|
|
20796
20756
|
|
|
20797
20757
|
cdef unsigned int num_gens = gen_dims.size()
|
|
20798
|
-
filtration_values = np.zeros(shape=(num_gens, num_parameters), dtype = np.
|
|
20799
|
-
cdef
|
|
20800
|
-
cdef
|
|
20758
|
+
filtration_values = np.zeros(shape=(num_gens, num_parameters), dtype = np.int32) - _Slicer._inf_value()
|
|
20759
|
+
cdef int32_t[:,:] F = filtration_values
|
|
20760
|
+
cdef int32_t[:,:] c_img = image.reshape(-1,num_parameters)
|
|
20801
20761
|
with nogil:
|
|
20802
20762
|
for i in range(num_gens):
|
|
20803
20763
|
# with gil:
|
|
@@ -20815,7 +20775,7 @@ def _from_bitmapf64(image, **slicer_kwargs):
|
|
|
20815
20775
|
# print(f"F = {np.asarray(F[i])}")
|
|
20816
20776
|
slicer = _Slicer(gen_maps, gen_dims, filtration_values)
|
|
20817
20777
|
return slicer
|
|
20818
|
-
def
|
|
20778
|
+
def _from_bitmapf64(image, **slicer_kwargs):
|
|
20819
20779
|
from multipers import Slicer
|
|
20820
20780
|
dtype = slicer_kwargs.get("dtype", image.dtype)
|
|
20821
20781
|
slicer_kwargs["dtype"] = dtype
|
|
@@ -20833,9 +20793,9 @@ def _from_bitmapf32(image, **slicer_kwargs):
|
|
|
20833
20793
|
cdef cset[unsigned int] vertices
|
|
20834
20794
|
|
|
20835
20795
|
cdef unsigned int num_gens = gen_dims.size()
|
|
20836
|
-
filtration_values = np.zeros(shape=(num_gens, num_parameters), dtype = np.
|
|
20837
|
-
cdef
|
|
20838
|
-
cdef
|
|
20796
|
+
filtration_values = np.zeros(shape=(num_gens, num_parameters), dtype = np.float64) - _Slicer._inf_value()
|
|
20797
|
+
cdef double[:,:] F = filtration_values
|
|
20798
|
+
cdef double[:,:] c_img = image.reshape(-1,num_parameters)
|
|
20839
20799
|
with nogil:
|
|
20840
20800
|
for i in range(num_gens):
|
|
20841
20801
|
# with gil:
|
|
@@ -20853,7 +20813,7 @@ def _from_bitmapf32(image, **slicer_kwargs):
|
|
|
20853
20813
|
# print(f"F = {np.asarray(F[i])}")
|
|
20854
20814
|
slicer = _Slicer(gen_maps, gen_dims, filtration_values)
|
|
20855
20815
|
return slicer
|
|
20856
|
-
def
|
|
20816
|
+
def _from_bitmapf32(image, **slicer_kwargs):
|
|
20857
20817
|
from multipers import Slicer
|
|
20858
20818
|
dtype = slicer_kwargs.get("dtype", image.dtype)
|
|
20859
20819
|
slicer_kwargs["dtype"] = dtype
|
|
@@ -20871,9 +20831,9 @@ def _from_bitmapi32(image, **slicer_kwargs):
|
|
|
20871
20831
|
cdef cset[unsigned int] vertices
|
|
20872
20832
|
|
|
20873
20833
|
cdef unsigned int num_gens = gen_dims.size()
|
|
20874
|
-
filtration_values = np.zeros(shape=(num_gens, num_parameters), dtype = np.
|
|
20875
|
-
cdef
|
|
20876
|
-
cdef
|
|
20834
|
+
filtration_values = np.zeros(shape=(num_gens, num_parameters), dtype = np.float32) - _Slicer._inf_value()
|
|
20835
|
+
cdef float[:,:] F = filtration_values
|
|
20836
|
+
cdef float[:,:] c_img = image.reshape(-1,num_parameters)
|
|
20877
20837
|
with nogil:
|
|
20878
20838
|
for i in range(num_gens):
|
|
20879
20839
|
# with gil:
|
|
@@ -20932,12 +20892,12 @@ def _from_bitmapi64(image, **slicer_kwargs):
|
|
|
20932
20892
|
|
|
20933
20893
|
def from_bitmap(img, **kwargs):
|
|
20934
20894
|
img = np.asarray(img)
|
|
20895
|
+
if img.dtype == np.int32:
|
|
20896
|
+
return _from_bitmapi32(img, **kwargs)
|
|
20935
20897
|
if img.dtype == np.float64:
|
|
20936
20898
|
return _from_bitmapf64(img, **kwargs)
|
|
20937
20899
|
if img.dtype == np.float32:
|
|
20938
20900
|
return _from_bitmapf32(img, **kwargs)
|
|
20939
|
-
if img.dtype == np.int32:
|
|
20940
|
-
return _from_bitmapi32(img, **kwargs)
|
|
20941
20901
|
if img.dtype == np.int64:
|
|
20942
20902
|
return _from_bitmapi64(img, **kwargs)
|
|
20943
20903
|
raise ValueError(f"Invalid dtype. Got {img.dtype=}, was expecting {available_dtype=}.")
|
|
@@ -20998,7 +20958,6 @@ def minimal_presentation(
|
|
|
20998
20958
|
str backend:Literal["mpfree", "2pac", ""]="mpfree",
|
|
20999
20959
|
str slicer_backend:Literal["matrix","clement","graph"]="matrix",
|
|
21000
20960
|
bool vineyard=True,
|
|
21001
|
-
id :Optional[str] =None,
|
|
21002
20961
|
dtype:type|_valid_dtypes=None,
|
|
21003
20962
|
int n_jobs = -1,
|
|
21004
20963
|
bool force=False,
|
|
@@ -21010,7 +20969,8 @@ def minimal_presentation(
|
|
|
21010
20969
|
and returns it as a slicer.
|
|
21011
20970
|
Backends differents than `mpfree` are unstable.
|
|
21012
20971
|
"""
|
|
21013
|
-
from multipers.io import _init_external_softwares,
|
|
20972
|
+
from multipers.io import _init_external_softwares, scc_reduce_from_str_to_slicer
|
|
20973
|
+
import tempfile
|
|
21014
20974
|
if is_slicer(slicer) and slicer.is_minpres and not force:
|
|
21015
20975
|
from warnings import warn
|
|
21016
20976
|
warn(f"(unnecessary computation) The slicer seems to be already reduced, from homology of degree {slicer.minpres_degree}.")
|
|
@@ -21026,24 +20986,24 @@ def minimal_presentation(
|
|
|
21026
20986
|
assert degree>=0, f"Degree not provided."
|
|
21027
20987
|
if not np.any(slicer.get_dimensions() == degree):
|
|
21028
20988
|
return type(slicer)()
|
|
21029
|
-
if id is None:
|
|
21030
|
-
id = str(threading.get_native_id())
|
|
21031
20989
|
if dtype is None:
|
|
21032
20990
|
dtype = slicer.dtype
|
|
21033
20991
|
dimension = slicer.dimension - degree # latest = L-1, which is empty, -1 for degree 0, -2 for degree 1 etc.
|
|
21034
|
-
|
|
21035
|
-
|
|
21036
|
-
|
|
21037
|
-
|
|
21038
|
-
|
|
21039
|
-
|
|
21040
|
-
|
|
21041
|
-
|
|
21042
|
-
|
|
21043
|
-
|
|
21044
|
-
|
|
21045
|
-
new_slicer =
|
|
21046
|
-
|
|
20992
|
+
with tempfile.TemporaryDirectory(prefix="multipers") as tmpdir:
|
|
20993
|
+
tmp_path = os.path.join(tmpdir, "multipers.scc")
|
|
20994
|
+
slicer.to_scc(path=tmp_path, strip_comments=True, degree=degree-1, unsqueeze = False)
|
|
20995
|
+
new_slicer = multipers.Slicer(None,backend=slicer_backend, vineyard=vineyard, dtype=dtype)
|
|
20996
|
+
if backend=="mpfree":
|
|
20997
|
+
shift_dimension=degree-1
|
|
20998
|
+
else:
|
|
20999
|
+
shift_dimension=degree
|
|
21000
|
+
scc_reduce_from_str_to_slicer(path=tmp_path, slicer=new_slicer, dimension=dimension, backend=backend, shift_dimension=shift_dimension, **minpres_kwargs)
|
|
21001
|
+
|
|
21002
|
+
new_slicer.minpres_degree = degree
|
|
21003
|
+
new_slicer.filtration_grid = slicer.filtration_grid if slicer.is_squeezed else None
|
|
21004
|
+
if new_slicer.is_squeezed and auto_clean:
|
|
21005
|
+
new_slicer = new_slicer._clean_filtration_grid()
|
|
21006
|
+
return new_slicer
|
|
21047
21007
|
|
|
21048
21008
|
|
|
21049
21009
|
def to_simplextree(s:Slicer_type, max_dim:int=-1) -> SimplexTreeMulti_type:
|