mtbls-mhd-integration 0.0.16__py3-none-any.whl → 0.0.17__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- mtbls2mhd/__init__.py +1 -1
- mtbls2mhd/v0_1/legacy/builder.py +4 -4
- {mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/METADATA +2 -2
- {mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/RECORD +8 -8
- {mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/WHEEL +0 -0
- {mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/entry_points.txt +0 -0
- {mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/licenses/LICENSE +0 -0
- {mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/top_level.txt +0 -0
mtbls2mhd/__init__.py
CHANGED
mtbls2mhd/v0_1/legacy/builder.py
CHANGED
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@@ -26,7 +26,7 @@ from mhd_model.model.v0_1.dataset.profiles.legacy.profile import MhDatasetLegacy
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from mhd_model.model.v0_1.rules.managed_cv_terms import (
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COMMON_ASSAY_TYPES,
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COMMON_CHARACTERISTIC_DEFINITIONS,
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COMMON_MEASUREMENT_TYPES_MAP,
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COMMON_OMICS_TYPES,
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COMMON_PARAMETER_DEFINITIONS,
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COMMON_PROTOCOLS,
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@@ -61,11 +61,11 @@ MTBLS_ASSAY_TYPES = {
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"MS": COMMON_ASSAY_TYPES["OBI:0000470"],
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}
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MTBLS_MEASUREMENT_TYPES = {
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"targeted":
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"untargeted":
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"targeted": COMMON_MEASUREMENT_TYPES_MAP["MSIO:0000100"],
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"untargeted": COMMON_MEASUREMENT_TYPES_MAP["MSIO:0000101"],
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}
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DEFAULT_MEASUREMENT_TYPE =
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DEFAULT_MEASUREMENT_TYPE = COMMON_MEASUREMENT_TYPES_MAP["MSIO:0000101"]
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DEFAULT_OMICS_TYPE = COMMON_OMICS_TYPES["EDAM:3172"]
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.4
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Name: mtbls-mhd-integration
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Version: 0.0.
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Version: 0.0.17
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Summary: MetaboLights - MetabolomicsHub Integration
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Author-email: MetaboLights Team <metabolights-help@ebi.ac.uk>
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License-Expression: Apache-2.0
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@@ -9,7 +9,7 @@ Description-Content-Type: text/markdown
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License-File: LICENSE
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Requires-Dist: asyncpg>=0.30.0
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Requires-Dist: metabolights-utils>=1.4.18
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Requires-Dist: mhd-model>=0.1.
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Requires-Dist: mhd-model>=0.1.46
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Requires-Dist: psycopg[binary,pool]>=3.3.2
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Requires-Dist: pydantic>=2.12.4
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Requires-Dist: pydantic-settings>=2.10.1
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@@ -1,4 +1,4 @@
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mtbls2mhd/__init__.py,sha256=
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mtbls2mhd/__init__.py,sha256=lkJhnuTb0LawSiMqaWAugon4vfs7AMhVqkBwwjO7xfg,158
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mtbls2mhd/config.py,sha256=BjOqAyfDhp9byoFjJz70xh4HRR8pu1yrm_5jweqygSI,2310
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mtbls2mhd/convertor_factory.py,sha256=WNXgzLFq84whwv0phrB1B2L1YRabO2tD0nPDT9QJ6gQ,1365
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mtbls2mhd/commands/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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@@ -8,16 +8,16 @@ mtbls2mhd/commands/create_mhd_file.py,sha256=0sDr-Cm0JhhEB5V1g66uoag3rlcaAnGP8Md
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mtbls2mhd/commands/validate.py,sha256=iwIKegviRxdH0r8scRXbDISlwQUzAq5uVoCHinU7x6Q,473
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mtbls2mhd/v0_1/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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mtbls2mhd/v0_1/legacy/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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mtbls2mhd/v0_1/legacy/builder.py,sha256=
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mtbls2mhd/v0_1/legacy/builder.py,sha256=sG6hc50FFdvarm1406E2z1xrzVvR3zqZMmFA8jOZBSQ,93117
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mtbls2mhd/v0_1/legacy/convertor.py,sha256=Nu6xJvEk8WsRQJQFoxM5eo-y46tVfWV8EkedVoqI9rI,2198
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mtbls2mhd/v0_1/legacy/db_metadata_collector.py,sha256=UGk1AeST1NQ9lWwy_sYZxaaWs0ajgaKELDJtXJ4-Uco,13071
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mtbls2mhd/v0_1/legacy/folder_metadata_collector.py,sha256=QwtXI9rBvdh6pxILQDHymIwYDqzGuMxqdOcqtdAObME,7538
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mtbls2mhd/v0_1/legacy/mtbls_study_schema.py,sha256=gUTbRmI8GfHI5leLiw8dxsmWnV3NnWw5RPX_LQWRFRQ,3162
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mtbls2mhd/v0_1/ms/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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mtbls2mhd/v0_1/ms/convertor.py,sha256=axkKDRx00ix6ceqJe9-KruEYEZOgaVtsAgCHiixPo5k,2201
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mtbls_mhd_integration-0.0.
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mtbls_mhd_integration-0.0.
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mtbls_mhd_integration-0.0.
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mtbls_mhd_integration-0.0.
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mtbls_mhd_integration-0.0.
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mtbls_mhd_integration-0.0.
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mtbls_mhd_integration-0.0.17.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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mtbls_mhd_integration-0.0.17.dist-info/METADATA,sha256=WVYl02uLUuCzx-5iqXouy1a5I1u78voiAB1RQrwgml0,688
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mtbls_mhd_integration-0.0.17.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
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mtbls_mhd_integration-0.0.17.dist-info/entry_points.txt,sha256=WQjM4flaYMyvHyv9zGKjCVk1i1_FGdNlhTmFVGgLgxs,61
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mtbls_mhd_integration-0.0.17.dist-info/top_level.txt,sha256=b7pI95n6HIQMFXDD0yL1NwldiDc-XdeWql4Iw-uYygQ,10
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mtbls_mhd_integration-0.0.17.dist-info/RECORD,,
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{mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/entry_points.txt
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File without changes
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{mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/licenses/LICENSE
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File without changes
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{mtbls_mhd_integration-0.0.16.dist-info → mtbls_mhd_integration-0.0.17.dist-info}/top_level.txt
RENAMED
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File without changes
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