msasim 25.3.0__cp39-cp39-musllinux_1_2_x86_64.whl → 25.3.1__cp39-cp39-musllinux_1_2_x86_64.whl

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Files changed (8) hide show
  1. _Sailfish.cpython-39-x86_64-linux-gnu.so +0 -0
  2. msasim/sailfish.py +2 -0
  3. {msasim-25.3.0.dist-info → msasim-25.3.1.dist-info}/METADATA +1 -1
  4. msasim-25.3.1.dist-info/RECORD +10 -0
  5. msasim-25.3.0.dist-info/RECORD +0 -10
  6. {msasim-25.3.0.dist-info → msasim-25.3.1.dist-info}/LICENSE +0 -0
  7. {msasim-25.3.0.dist-info → msasim-25.3.1.dist-info}/WHEEL +0 -0
  8. {msasim-25.3.0.dist-info → msasim-25.3.1.dist-info}/top_level.txt +0 -0
_Sailfish.cpython-39-x86_64-linux-gnu.so CHANGED
Binary file
msasim/sailfish.py CHANGED
@@ -410,6 +410,8 @@ class Simulator:
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  simProtocol.set_insertion_rates(0.05)
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  simProtocol.set_deletion_rates(0.05)
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  simProtocol.set_sequence_size(100)
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+ simProtocol.set_min_sequence_size(1)
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+
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  # verify sim_protocol
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  if self._verify_sim_protocol(simProtocol):
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  self._simProtocol = simProtocol
{msasim-25.3.0.dist-info → msasim-25.3.1.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: msasim
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- Version: 25.3.0
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+ Version: 25.3.1
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  Summary: A fast MSA simulator
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  Home-page: https://github.com/elyawy/Sailfish-backend
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  Author: Elya Wygoda
msasim-25.3.1.dist-info/RECORD ADDED
@@ -0,0 +1,10 @@
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+ _Sailfish.cpython-39-x86_64-linux-gnu.so,sha256=beonV4E0kgMwcOqujzoNsfma4N4Rb4kWBKWc6w7Wbns,1336793
2
+ msasim.libs/libgcc_s-a3a07607.so.1,sha256=5ptIUeAzZweNZrFehN0_Bb5B0FcJgux7NbAFoU8vwwo,148041
3
+ msasim.libs/libstdc++-496613c0.so.6.0.32,sha256=AwZhL5WFT99I2Q6vIxXOhW7qddfuOZ1xecxiP9QTVY4,3494361
4
+ msasim/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ msasim/sailfish.py,sha256=smYUY3vr5LomFQgACskkVy8lZkedGwahz6PEBbvpeSU,26249
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+ msasim-25.3.1.dist-info/LICENSE,sha256=p1Aa_mM2Nu6dG3XqMVU62Jhf04lNOwtXUrhhvhcDips,10312
7
+ msasim-25.3.1.dist-info/WHEEL,sha256=mXVmV81XPc0U-NdujS58BZ8Kl4f96uujgiOLxSHsx8I,110
8
+ msasim-25.3.1.dist-info/METADATA,sha256=mAuQVuhWzBmr9NuBJ2h3qmxl0XWN65jWSe6vtavFyTg,1644
9
+ msasim-25.3.1.dist-info/top_level.txt,sha256=NS1ILx5V94Yyh_M7yDrrqbBPu1TL_zJuxhsI90YEJVY,17
10
+ msasim-25.3.1.dist-info/RECORD,,
msasim-25.3.0.dist-info/RECORD DELETED
@@ -1,10 +0,0 @@
1
- _Sailfish.cpython-39-x86_64-linux-gnu.so,sha256=SwQjORhyrF_cfaXPje9u-EoMC7JMkiEJkPE90lFvNgQ,1336793
2
- msasim-25.3.0.dist-info/LICENSE,sha256=p1Aa_mM2Nu6dG3XqMVU62Jhf04lNOwtXUrhhvhcDips,10312
3
- msasim-25.3.0.dist-info/WHEEL,sha256=mXVmV81XPc0U-NdujS58BZ8Kl4f96uujgiOLxSHsx8I,110
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- msasim-25.3.0.dist-info/RECORD,,
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- msasim-25.3.0.dist-info/top_level.txt,sha256=NS1ILx5V94Yyh_M7yDrrqbBPu1TL_zJuxhsI90YEJVY,17
6
- msasim-25.3.0.dist-info/METADATA,sha256=Dy8qu-7ODzoc1DSfEaIEZeMon5dAOnSwPg_v83cIYnA,1644
7
- msasim.libs/libgcc_s-a3a07607.so.1,sha256=5ptIUeAzZweNZrFehN0_Bb5B0FcJgux7NbAFoU8vwwo,148041
8
- msasim.libs/libstdc++-496613c0.so.6.0.32,sha256=AwZhL5WFT99I2Q6vIxXOhW7qddfuOZ1xecxiP9QTVY4,3494361
9
- msasim/sailfish.py,sha256=TOruxZZJC8De43Tx-wlgL0YlnwsJ092WLnYR6XHZX4M,26199
10
- msasim/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0