msasim 24.7.0__cp36-cp36m-win_amd64.whl → 24.8.1__cp36-cp36m-win_amd64.whl

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Files changed (8) hide show
  1. _Sailfish.cp36-win_amd64.pyd +0 -0
  2. msasim/sailfish.py +1 -9
  3. {msasim-24.7.0.dist-info → msasim-24.8.1.dist-info}/METADATA +1 -1
  4. msasim-24.8.1.dist-info/RECORD +8 -0
  5. msasim-24.7.0.dist-info/RECORD +0 -8
  6. {msasim-24.7.0.dist-info → msasim-24.8.1.dist-info}/LICENSE +0 -0
  7. {msasim-24.7.0.dist-info → msasim-24.8.1.dist-info}/WHEEL +0 -0
  8. {msasim-24.7.0.dist-info → msasim-24.8.1.dist-info}/top_level.txt +0 -0
_Sailfish.cp36-win_amd64.pyd CHANGED
Binary file
msasim/sailfish.py CHANGED
@@ -5,14 +5,6 @@ from typing import List, Optional, Dict
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  from re import split
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  from enum import Enum
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- # print(_Sailfish.Tree)
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- # print(_Sailfish.Simulator)
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- # print(_Sailfish.SimProtocol)
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- # print(_Sailfish.Msa)
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- # print(_Sailfish.DiscreteDistribution)
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- # print(_Sailfish.modelFactory)
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- # print(_Sailfish.alphabetCode)
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- # print(_Sailfish.modelCode)
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  MODEL_CODES = _Sailfish.modelCode
@@ -390,7 +382,7 @@ class Msa:
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  return self._msa.print_indels()
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  def get_msa(self) -> str:
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- return self._msa.get_msa()
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+ return self._msa.get_msa_string()
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  def write_msa(self, file_path) -> None:
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  self._msa.write_msa(file_path)
{msasim-24.7.0.dist-info → msasim-24.8.1.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: msasim
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- Version: 24.7.0
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+ Version: 24.8.1
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  Summary: A fast MSA simulator
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  Home-page: https://github.com/elyawy/Sailfish-backend
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  Author: Elya Wygoda
msasim-24.8.1.dist-info/RECORD ADDED
@@ -0,0 +1,8 @@
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+ _Sailfish.cp36-win_amd64.pyd,sha256=93MsuTrsMlMBZFjQxPjKhDREE0sgRXbFf18DpK2sVnM,570368
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+ msasim/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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+ msasim/sailfish.py,sha256=Y6gxd2ITO8x_wwz5fmP42B9OoYUNEXap_rWXzdF1HlE,25098
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+ msasim-24.8.1.dist-info/LICENSE,sha256=MgvumWWAhx44Y7XYvLMzqDUZv_Mn4nZLuC-EBl9E0l0,10483
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+ msasim-24.8.1.dist-info/METADATA,sha256=Uk8TBGKZXGj_gEqwKK0cJtHM2q9d9uI4VfQPt2Z_S2g,1503
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+ msasim-24.8.1.dist-info/WHEEL,sha256=zukbZftcRdNfJ55Q_RYV9JZ3uVyqWKyq-wDJbmszs_U,101
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+ msasim-24.8.1.dist-info/top_level.txt,sha256=NS1ILx5V94Yyh_M7yDrrqbBPu1TL_zJuxhsI90YEJVY,17
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+ msasim-24.8.1.dist-info/RECORD,,
msasim-24.7.0.dist-info/RECORD DELETED
@@ -1,8 +0,0 @@
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- _Sailfish.cp36-win_amd64.pyd,sha256=VW3369CCGSyXOcOWr-55npPDkAFM3NPmNPZbO3We730,566784
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- msasim/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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- msasim/sailfish.py,sha256=wONJZhqQ6jSgYr2hhVhjuxgl7gG93raywoyTSZoHry4,25339
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- msasim-24.7.0.dist-info/LICENSE,sha256=MgvumWWAhx44Y7XYvLMzqDUZv_Mn4nZLuC-EBl9E0l0,10483
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- msasim-24.7.0.dist-info/METADATA,sha256=3pULjvZ69Qc-awZxn7Za9-sk9zunQCoLaQ7S9b61z8s,1503
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- msasim-24.7.0.dist-info/WHEEL,sha256=zukbZftcRdNfJ55Q_RYV9JZ3uVyqWKyq-wDJbmszs_U,101
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- msasim-24.7.0.dist-info/top_level.txt,sha256=NS1ILx5V94Yyh_M7yDrrqbBPu1TL_zJuxhsI90YEJVY,17
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- msasim-24.7.0.dist-info/RECORD,,