more-compute 0.2.6__py3-none-any.whl → 0.3.0__py3-none-any.whl

morecompute/utils/cell_magics.py

@@ -0,0 +1,713 @@
+import os
+import io
+import sys
+import time
+import asyncio
+import shlex
+import subprocess
+import platform
+from contextlib import redirect_stdout, redirect_stderr
+from typing import Dict, Any, Optional
+from fastapi import WebSocket
+
+from .shell_utils import prepare_shell_command, prepare_shell_environment
+
+
+class CellMagicHandlers:
+    """Handlers for IPython cell magic commands (%%magic)"""
+
+    def __init__(self, globals_dict: dict, special_handler):
+        self.globals_dict = globals_dict
+        self.special_handler = special_handler  # Reference to parent AsyncSpecialCommandHandler
+        self.captured_outputs = {}
+
+    async def execute_cell_content(self, cell_content: str, result: Dict[str, Any],
+                                   execution_count: int, websocket: Optional[WebSocket] = None,
+                                   capture_stdout: bool = False, capture_stderr: bool = False) -> tuple:
+        """
+        Execute cell content that may contain shell commands (!cmd) mixed with Python code.
+
+        Uses preprocessing to transform shell commands into Python function calls.
+        This approach properly handles shell commands inside control structures.
+
+        Supported:
+        - Shell commands on their own lines (can be indented): `!pip install pandas`
+        - Shell commands in if/else blocks: `if x:\n    !ls`
+        - Mixed Python and shell code in same cell
+        - Async execution (non-blocking)
+        - Cross-platform (Windows/macOS/Linux)
+
+        Returns:
+            (stdout_output, stderr_output) if capturing, otherwise (None, None)
+        """
+        stdout_capture = io.StringIO() if capture_stdout else None
+        stderr_capture = io.StringIO() if capture_stderr else None
+
+        # Store websocket reference for shell command execution
+        self._current_websocket = websocket
+        self._capture_mode = (capture_stdout or capture_stderr)
+
+        # Use preprocessing approach for all cases
+        # This transforms !cmd into function calls, preserving Python syntax
+        transformed_code = await self._preprocess_cell_content(cell_content, capture_mode=(capture_stdout or capture_stderr))
+
+        try:
+            # Compile the code
+            compiled_code = compile(transformed_code, '<cell>', 'exec')
+
+            if capture_stdout or capture_stderr:
+                # Execute with output capture in a thread pool to avoid blocking
+                # This allows us to send heartbeats while long-running commands execute
+                loop = asyncio.get_event_loop()
+
+                def _exec_with_capture():
+                    with redirect_stdout(stdout_capture or sys.stdout), \
+                         redirect_stderr(stderr_capture or sys.stderr):
+                        exec(compiled_code, self.globals_dict)
+
+                # Run in thread pool
+                exec_future = loop.run_in_executor(None, _exec_with_capture)
+
+                # Send heartbeats while waiting
+                heartbeat_count = 0
+                while not exec_future.done():
+                    heartbeat_count += 1
+                    if websocket and heartbeat_count % 2 == 0:  # Every 2 seconds
+                        try:
+                            await websocket.send_json({
+                                "type": "heartbeat",
+                                "data": {"status": "executing", "message": "Executing cell..."}
+                            })
+                        except:
+                            pass  # WebSocket might be closed
+                    await asyncio.sleep(1)
+
+                # Wait for completion
+                await exec_future
+            else:
+                # Execute normally
+                exec(compiled_code, self.globals_dict)
+        except Exception as e:
+            raise e
+        finally:
+            # Clean up websocket reference
+            self._current_websocket = None
+            self._capture_mode = False
+
+        # Return captured outputs
+        return (
+            stdout_capture.getvalue() if stdout_capture else None,
+            stderr_capture.getvalue() if stderr_capture else None
+        )
+
+    async def _execute_cell_with_async_shell(self, cell_content: str,
+                                             stdout_capture: Optional[io.StringIO],
+                                             stderr_capture: Optional[io.StringIO],
+                                             websocket: Optional[WebSocket]) -> None:
+        """
+        Execute cell content line-by-line with async shell command execution.
+        Used for %%capture mode to avoid blocking on long pip installs.
+        """
+        import re
+
+        lines = cell_content.split('\n')
+        python_lines = []
+
+        for line in lines:
+            # Check if this line is a shell command
+            shell_match = re.match(r'^(\s*)!(.+)$', line)
+
+            if shell_match:
+                # Execute accumulated Python code first
+                if python_lines:
+                    python_code = '\n'.join(python_lines)
+                    if stdout_capture or stderr_capture:
+                        with redirect_stdout(stdout_capture or sys.stdout), \
+                             redirect_stderr(stderr_capture or sys.stderr):
+                            exec(compile(python_code, '<cell>', 'exec'), self.globals_dict)
+                    else:
+                        exec(compile(python_code, '<cell>', 'exec'), self.globals_dict)
+                    python_lines = []
+
+                # Execute shell command asynchronously
+                shell_cmd = shell_match.group(2).strip()
+                await self._run_shell_non_blocking(
+                    shell_cmd, stdout_capture, stderr_capture, websocket
+                )
+            else:
+                # Accumulate Python line
+                python_lines.append(line)
+
+        # Execute remaining Python code
+        if python_lines:
+            python_code = '\n'.join(python_lines)
+            if stdout_capture or stderr_capture:
+                with redirect_stdout(stdout_capture or sys.stdout), \
+                     redirect_stderr(stderr_capture or sys.stderr):
+                    exec(compile(python_code, '<cell>', 'exec'), self.globals_dict)
+            else:
+                exec(compile(python_code, '<cell>', 'exec'), self.globals_dict)
+
+    async def _run_shell_non_blocking(self, cmd: str,
+                                      stdout_capture: Optional[io.StringIO],
+                                      stderr_capture: Optional[io.StringIO],
+                                      websocket: Optional[WebSocket]) -> int:
+        """
+        Run shell command in thread pool executor (non-blocking).
+        Sends periodic heartbeats to keep frontend alive during long operations.
+
+        Returns:
+            Return code from subprocess
+        """
+        loop = asyncio.get_event_loop()
+
+        # Prepare platform-specific shell command
+        system = platform.system()
+        if system == 'Windows':
+            shell_cmd = ['cmd', '/c', cmd]
+        else:
+            shell_cmd = ['/bin/bash', '-c', cmd]
+
+        # Run blocking subprocess in thread pool
+        shell_future = loop.run_in_executor(
+            None,  # Uses default ThreadPoolExecutor
+            lambda: subprocess.run(
+                shell_cmd,
+                stdout=subprocess.PIPE,
+                stderr=subprocess.PIPE,
+                text=True,
+                env=os.environ.copy(),
+                timeout=1800  # 30 minute timeout
+            )
+        )
+
+        # Send heartbeats while waiting
+        heartbeat_count = 0
+        while not shell_future.done():
+            heartbeat_count += 1
+            if websocket and heartbeat_count % 2 == 0:  # Every 2 seconds
+                try:
+                    await websocket.send_json({
+                        "type": "heartbeat",
+                        "data": {"status": "executing", "message": "Running shell command..."}
+                    })
+                except:
+                    pass  # WebSocket might be closed, continue anyway
+            await asyncio.sleep(1)
+
+        # Get result
+        proc = await shell_future
+
+        # Write captured output
+        if stdout_capture and proc.stdout:
+            stdout_capture.write(proc.stdout)
+        if stderr_capture and proc.stderr:
+            stderr_capture.write(proc.stderr)
+
+        return proc.returncode
+
+    async def _preprocess_cell_content(self, cell_content: str, capture_mode: bool = False) -> str:
+        """
+        Preprocess cell content to transform shell commands into Python code.
+        This is how IPython handles !commands - it transforms them before execution.
+
+        Args:
+            cell_content: The cell content to preprocess
+            capture_mode: Whether this is being called from %%capture (unused for now, but available for future use)
+
+        Example:
+            !pip install pandas  ->  _run_shell_command('pip install pandas')
+        """
+        import re
+
+        lines = cell_content.split('\n')
+        transformed_lines = []
+
+        # Create a shell command executor function in globals if not exists
+        # Use a closure to capture self reference for capture mode detection
+        cell_magic_handler = self  # Capture self in closure
+
+        if '_run_shell_command' not in self.globals_dict:
+            def _run_shell_command(cmd: str):
+                """Execute a shell command synchronously with streaming output (injected by cell magic handler)"""
+                import subprocess
+                import threading
+
+                # Prepare command and environment (using shared utilities)
+                shell_cmd = prepare_shell_command(cmd)
+                env = prepare_shell_environment(cmd)
+
+                # Stream output in real-time (like regular !commands)
+                # Use Popen instead of run to get real-time output
+                process = subprocess.Popen(
+                    shell_cmd,
+                    stdout=subprocess.PIPE,
+                    stderr=subprocess.PIPE,
+                    text=True,
+                    bufsize=1,  # Line buffered
+                    env=env
+                )
+
+                # Read and print output line by line (real-time streaming)
+                def read_stream(stream, output_type):
+                    """Read stream line by line and print immediately"""
+                    try:
+                        for line in iter(stream.readline, ''):
+                            if not line:
+                                break
+                            # Print immediately (unless in capture mode)
+                            if not getattr(cell_magic_handler, '_capture_mode', False):
+                                if output_type == 'stdout':
+                                    print(line, end='')
+                                    sys.stdout.flush()  # Force immediate flush for streaming
+                                else:
+                                    print(line, end='', file=sys.stderr)
+                                    sys.stderr.flush()  # Force immediate flush for streaming
+                    except Exception:
+                        pass
+                    finally:
+                        stream.close()
+
+                # Start threads to read stdout and stderr concurrently
+                stdout_thread = threading.Thread(target=read_stream, args=(process.stdout, 'stdout'))
+                stderr_thread = threading.Thread(target=read_stream, args=(process.stderr, 'stderr'))
+                stdout_thread.daemon = True
+                stderr_thread.daemon = True
+                stdout_thread.start()
+                stderr_thread.start()
+
+                # Wait for process to complete
+                return_code = process.wait()
+
+                # Wait for output threads to finish
+                stdout_thread.join()
+                stderr_thread.join()
+
+                return return_code
+
+            self.globals_dict['_run_shell_command'] = _run_shell_command
+
+        # Transform each line
+        for line in lines:
+            # Match shell commands: "    !pip install pandas"
+            shell_match = re.match(r'^(\s*)!(.+)$', line)
+
+            if shell_match:
+                indent = shell_match.group(1)
+                shell_cmd = shell_match.group(2).strip()
+
+                # Use repr() for proper escaping of quotes and backslashes
+                # This handles all edge cases correctly
+                shell_cmd_repr = repr(shell_cmd)
+
+                # Transform to synchronous function call
+                # This preserves Python syntax (shell command becomes valid Python)
+                transformed = f"{indent}_run_shell_command({shell_cmd_repr})"
+                transformed_lines.append(transformed)
+            else:
+                # Regular Python line
+                transformed_lines.append(line)
+
+        return '\n'.join(transformed_lines)
+
+    async def handle_capture(self, args: list, cell_content: str, result: Dict[str, Any],
+                            start_time: float, execution_count: int,
+                            websocket: Optional[WebSocket] = None) -> Dict[str, Any]:
+        """
+        Handle %%capture magic - capture stdout/stderr without displaying.
+        Usage: %%capture [output_var] [--no-stdout] [--no-stderr] [--no-display]
+        """
+        output_var = None
+        no_stdout = "--no-stdout" in args
+        no_stderr = "--no-stderr" in args
+
+        # First non-flag argument is the output variable name
+        for arg in args:
+            if not arg.startswith('--'):
+                output_var = arg
+                break
+
+        capture_stdout = not no_stdout
+        capture_stderr = not no_stderr
+
+        try:
+            stdout_text, stderr_text = await self.execute_cell_content(
+                cell_content, result, execution_count, websocket,
+                capture_stdout, capture_stderr
+            )
+
+            # Store captured output in a variable if specified
+            if output_var:
+                captured_data = {
+                    'stdout': stdout_text or '',
+                    'stderr': stderr_text or ''
+                }
+                self.globals_dict[output_var] = captured_data
+                self.captured_outputs[output_var] = captured_data
+
+            # Check if there were any errors in stderr (pip failures, etc.)
+            if stderr_text and stderr_text.strip():
+                # Check for common error indicators
+                stderr_lower = stderr_text.lower()
+                if any(err in stderr_lower for err in ['error:', 'failed', 'could not', 'unable to']):
+                    # Add a warning output (not a full error, just FYI)
+                    result["outputs"].append({
+                        "output_type": "stream",
+                        "name": "stderr",
+                        "text": f" Captured stderr (may contain errors):\n{stderr_text[:500]}{'...' if len(stderr_text) > 500 else ''}\n"
+                    })
+
+            # Don't add outputs to result (they're captured, not displayed)
+            result["status"] = "ok"
+
+            # Check if pip install/uninstall occurred and notify
+            if websocket and ('pip install' in cell_content or 'pip uninstall' in cell_content):
+                try:
+                    await websocket.send_json({
+                        "type": "packages_updated",
+                        "data": {"action": "pip"}
+                    })
+                except Exception:
+                    pass  # Ignore websocket errors
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "execution_complete",
+                    "data": {
+                        "status": "ok",
+                        "message": "Output captured" + (f" in variable '{output_var}'" if output_var else "")
+                    }
+                })
+
+        except Exception as e:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": type(e).__name__,
+                "evalue": str(e),
+                "traceback": [f"Capture magic error: {str(e)}"]
+            }
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "execution_error",
+                    "data": {"error": result["error"]}
+                })
+
+        return result
+
+    async def handle_time(self, cell_content: str, result: Dict[str, Any],
+                         start_time: float, execution_count: int,
+                         websocket: Optional[WebSocket] = None) -> Dict[str, Any]:
+        """
+        Handle %%time magic - time cell execution and display results.
+        """
+        try:
+            # Record start time
+            cell_start = time.time()
+            cpu_start = time.process_time()
+
+            # Execute cell content
+            await self.execute_cell_content(
+                cell_content, result, execution_count, websocket
+            )
+
+            # Calculate timing
+            wall_time = time.time() - cell_start
+            cpu_time = time.process_time() - cpu_start
+
+            # Format timing output
+            timing_output = f"CPU times: user {cpu_time:.2f} s, sys: 0 s, total: {cpu_time:.2f} s\n"
+            timing_output += f"Wall time: {wall_time:.2f} s"
+
+            # Add timing as stream output
+            result["outputs"].append({
+                "output_type": "stream",
+                "name": "stdout",
+                "text": timing_output + "\n"
+            })
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "stream_output",
+                    "data": {
+                        "stream": "stdout",
+                        "text": timing_output + "\n"
+                    }
+                })
+
+        except Exception as e:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": type(e).__name__,
+                "evalue": str(e),
+                "traceback": [f"Time magic error: {str(e)}"]
+            }
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "execution_error",
+                    "data": {"error": result["error"]}
+                })
+
+        return result
+
+    async def handle_timeit(self, args: list, cell_content: str, result: Dict[str, Any],
+                           start_time: float, execution_count: int,
+                           websocket: Optional[WebSocket] = None) -> Dict[str, Any]:
+        """
+        Handle %%timeit magic - time cell execution using timeit module.
+        Options: -n<N> (iterations), -r<R> (repeats), -q (quiet)
+        """
+        import timeit
+
+        # Parse arguments
+        number = None
+        repeat = 7
+        quiet = '-q' in args
+
+        for arg in args:
+            if arg.startswith('-n'):
+                number = int(arg[2:])
+            elif arg.startswith('-r'):
+                repeat = int(arg[2:])
+
+        try:
+            # Create a timer
+            timer = timeit.Timer(
+                stmt=cell_content,
+                globals=self.globals_dict
+            )
+
+            # Auto-determine number of iterations if not specified
+            if number is None:
+                # Determine number of loops automatically
+                for i in range(1, 10):
+                    n = 10 ** i
+                    try:
+                        t = timer.timeit(n)
+                        if t >= 0.2:
+                            number = n
+                            break
+                    except:
+                        number = 1
+                        break
+                if number is None:
+                    number = 10 ** 7
+
+            # Run the timing
+            all_runs = timer.repeat(repeat=repeat, number=number)
+            best = min(all_runs) / number
+
+            # Format output
+            if best < 1e-6:
+                timing_str = f"{best * 1e9:.0f} ns"
+            elif best < 1e-3:
+                timing_str = f"{best * 1e6:.0f} µs"
+            elif best < 1:
+                timing_str = f"{best * 1e3:.0f} ms"
+            else:
+                timing_str = f"{best:.2f} s"
+
+            output_text = f"{timing_str} ± {(max(all_runs) - min(all_runs)) / number * 1e6:.0f} µs per loop (mean ± std. dev. of {repeat} runs, {number} loops each)\n"
+
+            if not quiet:
+                result["outputs"].append({
+                    "output_type": "stream",
+                    "name": "stdout",
+                    "text": output_text
+                })
+
+                if websocket:
+                    await websocket.send_json({
+                        "type": "stream_output",
+                        "data": {"stream": "stdout", "text": output_text}
+                    })
+
+        except Exception as e:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": type(e).__name__,
+                "evalue": str(e),
+                "traceback": [f"Timeit magic error: {str(e)}"]
+            }
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "execution_error",
+                    "data": {"error": result["error"]}
+                })
+
+        return result
+
+    async def handle_writefile(self, args: list, cell_content: str, result: Dict[str, Any],
+                              start_time: float, websocket: Optional[WebSocket] = None) -> Dict[str, Any]:
+        """
+        Handle %%writefile magic - write cell contents to file.
+        Usage: %%writefile [-a/--append] filename
+        """
+        if not args:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": "UsageError",
+                "evalue": "%%writefile requires a filename",
+                "traceback": ["Usage: %%writefile [-a/--append] filename"]
+            }
+            return result
+
+        append_mode = '-a' in args or '--append' in args
+        filename = args[-1]  # Last argument is the filename
+
+        try:
+            mode = 'a' if append_mode else 'w'
+            with open(filename, mode) as f:
+                f.write(cell_content)
+                if not cell_content.endswith('\n'):
+                    f.write('\n')
+
+            action = "Appending to" if append_mode else "Writing"
+            output_text = f"{action} {filename}\n"
+
+            result["outputs"].append({
+                "output_type": "stream",
+                "name": "stdout",
+                "text": output_text
+            })
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "stream_output",
+                    "data": {"stream": "stdout", "text": output_text}
+                })
+
+        except Exception as e:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": type(e).__name__,
+                "evalue": str(e),
+                "traceback": [f"Writefile magic error: {str(e)}"]
+            }
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "execution_error",
+                    "data": {"error": result["error"]}
+                })
+
+        return result
+
+    async def handle_bash(self, cell_content: str, result: Dict[str, Any],
+                         start_time: float, websocket: Optional[WebSocket] = None) -> Dict[str, Any]:
+        """
+        Handle %%bash / %%sh magic - run cell as bash script.
+        """
+        try:
+            # Execute as shell script
+            shell_result = {
+                "outputs": [],
+                "status": "ok"
+            }
+
+            # Write cell content to temporary script and execute
+            import tempfile
+            with tempfile.NamedTemporaryFile(mode='w', suffix='.sh', delete=False) as f:
+                f.write(cell_content)
+                script_path = f.name
+
+            try:
+                await self.special_handler._execute_shell_command(
+                    f"bash {script_path}", shell_result, start_time, websocket
+                )
+
+                # Merge results
+                result["outputs"].extend(shell_result.get("outputs", []))
+                if shell_result.get("status") == "error":
+                    result["status"] = "error"
+                    if "error" in shell_result:
+                        result["error"] = shell_result["error"]
+            finally:
+                # Clean up temp file
+                os.unlink(script_path)
+
+        except Exception as e:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": type(e).__name__,
+                "evalue": str(e),
+                "traceback": [f"Bash magic error: {str(e)}"]
+            }
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "execution_error",
+                    "data": {"error": result["error"]}
+                })
+
+        return result
+
+    async def handle_html(self, cell_content: str, result: Dict[str, Any],
+                         start_time: float, websocket: Optional[WebSocket] = None) -> Dict[str, Any]:
+        """
+        Handle %%html magic - render cell as HTML.
+        """
+        try:
+            result["outputs"].append({
+                "output_type": "display_data",
+                "data": {
+                    "text/html": cell_content,
+                    "text/plain": f"<IPython.core.display.HTML object>"
+                }
+            })
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "display_data",
+                    "data": {
+                        "data": {
+                            "text/html": cell_content
+                        }
+                    }
+                })
+
+        except Exception as e:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": type(e).__name__,
+                "evalue": str(e),
+                "traceback": [f"HTML magic error: {str(e)}"]
+            }
+
+        return result
+
+    async def handle_markdown(self, cell_content: str, result: Dict[str, Any],
+                             start_time: float, websocket: Optional[WebSocket] = None) -> Dict[str, Any]:
+        """
+        Handle %%markdown magic - render cell as Markdown.
+        """
+        try:
+            result["outputs"].append({
+                "output_type": "display_data",
+                "data": {
+                    "text/markdown": cell_content,
+                    "text/plain": f"<IPython.core.display.Markdown object>"
+                }
+            })
+
+            if websocket:
+                await websocket.send_json({
+                    "type": "display_data",
+                    "data": {
+                        "data": {
+                            "text/markdown": cell_content
+                        }
+                    }
+                })
+
+        except Exception as e:
+            result["status"] = "error"
+            result["error"] = {
+                "ename": type(e).__name__,
+                "evalue": str(e),
+                "traceback": [f"Markdown magic error: {str(e)}"]
+            }
+
+        return result