moducomp 0.7.10__py3-none-any.whl → 0.7.11__py3-none-any.whl

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Files changed (6) hide show
  1. moducomp/__init__.py +1 -1
  2. {moducomp-0.7.10.dist-info → moducomp-0.7.11.dist-info}/METADATA +7 -7
  3. {moducomp-0.7.10.dist-info → moducomp-0.7.11.dist-info}/RECORD +6 -6
  4. {moducomp-0.7.10.dist-info → moducomp-0.7.11.dist-info}/WHEEL +0 -0
  5. {moducomp-0.7.10.dist-info → moducomp-0.7.11.dist-info}/entry_points.txt +0 -0
  6. {moducomp-0.7.10.dist-info → moducomp-0.7.11.dist-info}/licenses/LICENSE.txt +0 -0
moducomp/__init__.py CHANGED
@@ -2,7 +2,7 @@
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  moducomp: metabolic module completeness and complementarity for microbiomes.
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  """
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- __version__ = "0.7.10"
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+ __version__ = "0.7.11"
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  __author__ = "Juan C. Villada"
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  __email__ = "jvillada@lbl.gov"
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  __title__ = "moducomp"
{moducomp-0.7.10.dist-info → moducomp-0.7.11.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: moducomp
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- Version: 0.7.10
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+ Version: 0.7.11
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  Summary: moducomp: metabolic module completeness and complementarity for microbiomes.
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  Keywords: bioinformatics,microbiome,metabolic,kegg,genomics
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  Author-email: "Juan C. Villada" <jvillada@lbl.gov>
@@ -120,17 +120,17 @@ graph TD
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  C -->|analyze-ko-matrix| H[Load existing KO matrix]
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  D --> E[Prepare genomes: adapt headers or copy to tmp]
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  E --> F[Merge genomes into single FAA]
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- F --> G[Run eggNOG-mapper (if needed)]
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- G --> H[Create KO matrix (`kos_matrix.csv`)]
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+ F --> G[Run eggNOG-mapper if needed]
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+ G --> H[Create KO matrix kos_matrix.csv]
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  H --> I[Convert KO matrix to KPCT input]
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- I --> J[Run KPCT (parallel with fallback)]
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+ I --> J[Run KPCT with parallel fallback]
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  J --> K[Create module completeness matrix]
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  K --> L{Complementarity requested?}
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- L -->|Yes| M[Generate complementarity report(s)]
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+ L -->|Yes| M[Generate complementarity reports]
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  L -->|No| N[Skip]
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- M --> O[Write outputs + logs]
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+ M --> O[Write outputs and logs]
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  N --> O
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- O --> P[Optional cleanup of `tmp/`]
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+ O --> P[Optional cleanup of tmp]
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  P --> Q([Pipeline complete])
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  ```
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{moducomp-0.7.10.dist-info → moducomp-0.7.11.dist-info}/RECORD RENAMED
@@ -1,11 +1,11 @@
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- moducomp/__init__.py,sha256=KXXHUQxz2yNFGf1_6cHMtl1fr2gbXjF6UEIzns9QBTM,659
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+ moducomp/__init__.py,sha256=aCyJFC9uD2L4Pv7NJxSFMmFDtLYnxQ-lFkkXBu3ri4U,659
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  moducomp/__main__.py,sha256=1O2pv6IGjUgqnbqsiMLtVqjxWQpRtZUjp8LDljZ1bsI,185
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  moducomp/moducomp.py,sha256=R4_mXvfpe_ojfDKibduMvgkTC1QDn4sFUt9TFc9xVUw,142734
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  moducomp/data/test_genomes/IMG2562617132.faa,sha256=gZPh-08pMRdAWJRr3__TbnU1F68CdkDb3gxtpaCLTTc,356863
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  moducomp/data/test_genomes/IMG2568526683.faa,sha256=PxFJwe-68UGw7il1hGlNhZt4-2WzzxXxGE1GTskDnow,343109
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  moducomp/data/test_genomes/IMG2740892217.faa,sha256=WsId4sIPxENbqF6tYFouAgDCy6T0SXNY6TywxBNe-3E,548954
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- moducomp-0.7.10.dist-info/entry_points.txt,sha256=dwt0_w7Ex9p1vhfp2fl4WXJLBh50u9fXTRNlAOJkAd4,114
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- moducomp-0.7.10.dist-info/licenses/LICENSE.txt,sha256=pt0cfIq9Wop21KDZYyQgP0M1YWYvKG0PomA5cUDC4TI,1536
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- moducomp-0.7.10.dist-info/WHEEL,sha256=_2ozNFCLWc93bK4WKHCO-eDUENDlo-dgc9cU3qokYO4,82
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- moducomp-0.7.10.dist-info/METADATA,sha256=_WnWpR9pSOpKcgNOolcf1uZaUYLgg0udk1YrYxqu0A4,14726
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- moducomp-0.7.10.dist-info/RECORD,,
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+ moducomp-0.7.11.dist-info/entry_points.txt,sha256=dwt0_w7Ex9p1vhfp2fl4WXJLBh50u9fXTRNlAOJkAd4,114
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+ moducomp-0.7.11.dist-info/licenses/LICENSE.txt,sha256=pt0cfIq9Wop21KDZYyQgP0M1YWYvKG0PomA5cUDC4TI,1536
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+ moducomp-0.7.11.dist-info/WHEEL,sha256=_2ozNFCLWc93bK4WKHCO-eDUENDlo-dgc9cU3qokYO4,82
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+ moducomp-0.7.11.dist-info/METADATA,sha256=jtYz1MoBhV6tRLfJOJ0cuKg_o6Qjnqt2kl0qc1I-V0Y,14715
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+ moducomp-0.7.11.dist-info/RECORD,,