mlquantify 0.0.11.2__py3-none-any.whl → 0.1.1__py3-none-any.whl

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Files changed (85) hide show
  1. mlquantify/__init__.py +32 -6
  2. mlquantify/base.py +559 -257
  3. mlquantify/classification/__init__.py +1 -1
  4. mlquantify/classification/methods.py +160 -0
  5. mlquantify/evaluation/__init__.py +14 -2
  6. mlquantify/evaluation/measures.py +215 -0
  7. mlquantify/evaluation/protocol.py +647 -0
  8. mlquantify/methods/__init__.py +37 -40
  9. mlquantify/methods/aggregative.py +1030 -0
  10. mlquantify/methods/meta.py +472 -0
  11. mlquantify/methods/mixture_models.py +1003 -0
  12. mlquantify/methods/non_aggregative.py +136 -0
  13. mlquantify/methods/threshold_optimization.py +957 -0
  14. mlquantify/model_selection.py +377 -232
  15. mlquantify/plots.py +367 -0
  16. mlquantify/utils/__init__.py +2 -2
  17. mlquantify/utils/general.py +334 -0
  18. mlquantify/utils/method.py +449 -0
  19. {mlquantify-0.0.11.2.dist-info → mlquantify-0.1.1.dist-info}/METADATA +137 -122
  20. mlquantify-0.1.1.dist-info/RECORD +22 -0
  21. {mlquantify-0.0.11.2.dist-info → mlquantify-0.1.1.dist-info}/WHEEL +1 -1
  22. mlquantify/classification/pwkclf.py +0 -73
  23. mlquantify/evaluation/measures/__init__.py +0 -26
  24. mlquantify/evaluation/measures/ae.py +0 -11
  25. mlquantify/evaluation/measures/bias.py +0 -16
  26. mlquantify/evaluation/measures/kld.py +0 -8
  27. mlquantify/evaluation/measures/mse.py +0 -12
  28. mlquantify/evaluation/measures/nae.py +0 -16
  29. mlquantify/evaluation/measures/nkld.py +0 -13
  30. mlquantify/evaluation/measures/nrae.py +0 -16
  31. mlquantify/evaluation/measures/rae.py +0 -12
  32. mlquantify/evaluation/measures/se.py +0 -12
  33. mlquantify/evaluation/protocol/_Protocol.py +0 -202
  34. mlquantify/evaluation/protocol/__init__.py +0 -2
  35. mlquantify/evaluation/protocol/app.py +0 -146
  36. mlquantify/evaluation/protocol/npp.py +0 -34
  37. mlquantify/methods/aggregative/ThreholdOptm/_ThreholdOptimization.py +0 -62
  38. mlquantify/methods/aggregative/ThreholdOptm/__init__.py +0 -7
  39. mlquantify/methods/aggregative/ThreholdOptm/acc.py +0 -27
  40. mlquantify/methods/aggregative/ThreholdOptm/max.py +0 -23
  41. mlquantify/methods/aggregative/ThreholdOptm/ms.py +0 -21
  42. mlquantify/methods/aggregative/ThreholdOptm/ms2.py +0 -25
  43. mlquantify/methods/aggregative/ThreholdOptm/pacc.py +0 -41
  44. mlquantify/methods/aggregative/ThreholdOptm/t50.py +0 -21
  45. mlquantify/methods/aggregative/ThreholdOptm/x.py +0 -23
  46. mlquantify/methods/aggregative/__init__.py +0 -9
  47. mlquantify/methods/aggregative/cc.py +0 -32
  48. mlquantify/methods/aggregative/emq.py +0 -86
  49. mlquantify/methods/aggregative/fm.py +0 -72
  50. mlquantify/methods/aggregative/gac.py +0 -96
  51. mlquantify/methods/aggregative/gpac.py +0 -87
  52. mlquantify/methods/aggregative/mixtureModels/_MixtureModel.py +0 -81
  53. mlquantify/methods/aggregative/mixtureModels/__init__.py +0 -5
  54. mlquantify/methods/aggregative/mixtureModels/dys.py +0 -55
  55. mlquantify/methods/aggregative/mixtureModels/dys_syn.py +0 -89
  56. mlquantify/methods/aggregative/mixtureModels/hdy.py +0 -46
  57. mlquantify/methods/aggregative/mixtureModels/smm.py +0 -27
  58. mlquantify/methods/aggregative/mixtureModels/sord.py +0 -77
  59. mlquantify/methods/aggregative/pcc.py +0 -33
  60. mlquantify/methods/aggregative/pwk.py +0 -38
  61. mlquantify/methods/meta/__init__.py +0 -1
  62. mlquantify/methods/meta/ensemble.py +0 -236
  63. mlquantify/methods/non_aggregative/__init__.py +0 -1
  64. mlquantify/methods/non_aggregative/hdx.py +0 -71
  65. mlquantify/plots/__init__.py +0 -2
  66. mlquantify/plots/distribution_plot.py +0 -109
  67. mlquantify/plots/protocol_plot.py +0 -193
  68. mlquantify/utils/general_purposes/__init__.py +0 -8
  69. mlquantify/utils/general_purposes/convert_col_to_array.py +0 -13
  70. mlquantify/utils/general_purposes/generate_artificial_indexes.py +0 -29
  71. mlquantify/utils/general_purposes/get_real_prev.py +0 -9
  72. mlquantify/utils/general_purposes/load_quantifier.py +0 -4
  73. mlquantify/utils/general_purposes/make_prevs.py +0 -23
  74. mlquantify/utils/general_purposes/normalize.py +0 -20
  75. mlquantify/utils/general_purposes/parallel.py +0 -10
  76. mlquantify/utils/general_purposes/round_protocol_df.py +0 -14
  77. mlquantify/utils/method_purposes/__init__.py +0 -6
  78. mlquantify/utils/method_purposes/distances.py +0 -21
  79. mlquantify/utils/method_purposes/getHist.py +0 -13
  80. mlquantify/utils/method_purposes/get_scores.py +0 -33
  81. mlquantify/utils/method_purposes/moss.py +0 -16
  82. mlquantify/utils/method_purposes/ternary_search.py +0 -14
  83. mlquantify/utils/method_purposes/tprfpr.py +0 -42
  84. mlquantify-0.0.11.2.dist-info/RECORD +0 -73
  85. {mlquantify-0.0.11.2.dist-info → mlquantify-0.1.1.dist-info}/top_level.txt +0 -0
mlquantify/methods/__init__.py CHANGED
@@ -1,40 +1,37 @@
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- from .aggregative import *
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- from .non_aggregative import *
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- from .meta import *
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-
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-
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- AGGREGATIVE = {
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- "CC": CC,
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- "PCC": PCC,
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- "EMQ": EMQ,
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- "FM": FM,
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- "GAC": GAC,
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- "GPAC": GPAC,
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- "PWK": PWK,
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- "ACC": ACC,
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- "MAX": MAX,
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- "MS": MS,
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- "MS2": MS2,
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- "PACC": PACC,
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- "T50": T50,
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- "X": X_method,
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- "DyS": DyS,
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- "DySsyn": DySsyn,
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- "HDy": HDy,
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- "SMM": SMM,
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- "SORD": SORD,
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- }
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-
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- NON_AGGREGATIVE = {
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- "HDx": HDx,
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- }
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-
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- META = {
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- "ENSEMBLE": Ensemble
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- }
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-
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-
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- METHODS = AGGREGATIVE | NON_AGGREGATIVE
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-
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- def get_method(method:str):
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- return METHODS.get(method)
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+ from .aggregative import *
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+ from .meta import *
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+ from .non_aggregative import *
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+
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+
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+ AGGREGATIVE = {
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+ "CC": CC,
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+ "PCC": PCC,
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+ "EMQ": EMQ,
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+ "FM": FM,
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+ "GAC": GAC,
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+ "GPAC": GPAC,
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+ "PWK": PWK,
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+ "ACC": ACC,
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+ "MAX": MAX,
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+ "MS": MS,
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+ "MS2": MS2,
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+ "PACC": PACC,
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+ "T50": T50,
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+ "X": X_method,
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+ "DyS": DyS,
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+ "DySsyn": DySsyn,
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+ "HDy": HDy,
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+ "SMM": SMM,
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+ "SORD": SORD,
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+ }
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+
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+ NON_AGGREGATIVE = {
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+ "HDx": HDx
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+ }
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+
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+ META = {
33
+ "ENSEMBLE": Ensemble
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+ }
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+
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+
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+ METHODS = AGGREGATIVE | NON_AGGREGATIVE | META