mimical 0.0.2__py3-none-any.whl → 0.0.4__py3-none-any.whl

mimical/__init__.py

@@ -2,4 +2,4 @@ from . import fitting
 from . import plotting
 
 
-from .fitting import BOGfit
+from .fitting import mimical

mimical/fitting/__init__.py

@@ -1,3 +1,3 @@
-from .fitter import BOGfit
+from .fitter import mimical
 from .prior_handler import priorHandler
 

mimical/fitting/fitter.py

@@ -15,14 +15,14 @@ from ..plotting import Plotter
 from ..utils import filter_set
 
 dir_path = os.getcwd()
-if not os.path.isdir(dir_path + "/bogout"):
-    os.system('mkdir ' + dir_path + "/bogout")
-    os.system('mkdir ' + dir_path + "/bogout/plots")
-    os.system('mkdir ' + dir_path + "/bogout/posteriors")
+if not os.path.isdir(dir_path + "/mimical"):
+    os.system('mkdir ' + dir_path + "/mimical")
+    os.system('mkdir ' + dir_path + "/mimical/plots")
+    os.system('mkdir ' + dir_path + "/mimical/posteriors")
 
 
 
-class BOGfit(object):
+class mimical(object):
     """ Bayesian Observer of Galaxies - Fit.
     Fits multi-filter images of galaxies simultaeneously using Petrofit and Nautilus
     by specifying either an individual filter dependency for model parameters or
@@ -147,8 +147,8 @@ class BOGfit(object):
             raise Exception("Prior labels do not match model parameters.")
         
 
-        if os.path.isfile(dir_path+'/bogout/posteriors' + f'/{self.id}.txt'):
-            samples = pd.read_csv(dir_path+'/bogout/posteriors' + f'/{self.id}.txt', delimiter=' ').to_numpy()
+        if os.path.isfile(dir_path+'/mimical/posteriors' + f'/{self.id}.txt'):
+            samples = pd.read_csv(dir_path+'/mimical/posteriors' + f'/{self.id}.txt', delimiter=' ').to_numpy()
         
         else:
             # Run sampler
@@ -163,19 +163,19 @@ class BOGfit(object):
 
             # Plot and save the corner plot
             corner.corner(points, weights=np.exp(log_w), bins=20, labels=np.array(self.fitter_prior.keys), color='purple', plot_datapoints=False, range=np.repeat(0.999, len(self.fitter_prior.keys)))
-            plt.savefig(dir_path+'/bogout/plots' + f'/corner_{self.id}.pdf', bbox_inches='tight')
+            plt.savefig(dir_path+'/mimical/plots' + f'/corner_{self.id}.pdf', bbox_inches='tight')
 
             # Sample an appropriately weighted posterior for representative samples.
             n_post = 10000
             indices = np.random.choice(np.arange(points.shape[0]), size = n_post, p=np.exp(log_w))
             samples = points[indices]
             samples_df = pd.DataFrame(data=samples, columns=self.fitter_prior.keys)
-            samples_df.to_csv(dir_path+'/bogout/posteriors' + f'/{self.id}.txt', sep=' ', index=False)
+            samples_df.to_csv(dir_path+'/mimical/posteriors' + f'/{self.id}.txt', sep=' ', index=False)
 
 
         # Plot and save the median-parameter fit
         Plotter().plot_median(self.images, self.wavs, self.convolved_models, samples, list(self.fitter_prior.keys), self.prior_handler)
-        plt.savefig(dir_path+'/bogout/plots' + f'/{self.id}_best_model.pdf', bbox_inches='tight')
+        plt.savefig(dir_path+'/mimical/plots' + f'/{self.id}_best_model.pdf', bbox_inches='tight')
 
         # Return the median-parameter model
         fit_dic = dict(zip((np.array((list(self.fitter_prior.keys)))+"_50").tolist(), np.median(samples, axis=0).tolist()))

{mimical-0.0.2.dist-info → mimical-0.0.4.dist-info}/METADATA

@@ -1,7 +1,7 @@
 Metadata-Version: 2.4
 Name: mimical
-Version: 0.0.2
-Summary: Intesity modelling of multiply-imaged objects.
+Version: 0.0.4
+Summary: Intesity modelling of multiply-imaged objects
 Author: Struan Stevenson
 Author-email: struan.stevenson@ed.ac.uk
 Description-Content-Type: text/markdown

mimical-0.0.4.dist-info/RECORD

@@ -0,0 +1,12 @@
+mimical/__init__.py,sha256=cBuyDtPwn6KcIkjlT7oct36jigvYDJmbZNmnt1I1QJU,75
+mimical/fitting/__init__.py,sha256=xcnLoeBDtt4Le5NhD6GhJe2ZRPNSsEySRHFYNuJyNEQ,69
+mimical/fitting/fitter.py,sha256=5JOJnPmvISlZ5ZJM5Nz1sYVj-uCCOmONXzbvCCj8ZnY,7690
+mimical/fitting/prior_handler.py,sha256=yXvxbohS6f94CMRyeIViFc83hRYAj82IZNA5mzhMSRw,4193
+mimical/plotting/__init__.py,sha256=I1ZpQA48g-YPkqwrDGgTrqaTxDUgR8n0mbBX0MdbZtU,30
+mimical/plotting/plotting.py,sha256=OWTR-uOT4UpBw0XcKpl_uFSODuEdcfw7nIk3Sf1cOGY,2646
+mimical/utils/__init__.py,sha256=yolMgYFpvXoHuyV-ijGo26SQ0_niw0gz__iAFgdiQiY,35
+mimical/utils/filter_set.py,sha256=EITLa2c3FG3n1-v7KatKRwHCRyfZ4TTjsi_WM7Bz64k,6819
+mimical-0.0.4.dist-info/METADATA,sha256=3fUVREfA3Vga9uBlFmRGh1POh_d2okQM8O3fTC2OdzQ,831
+mimical-0.0.4.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+mimical-0.0.4.dist-info/top_level.txt,sha256=z6HTYpsoNjLUFayXjn8WyjX8C1mIbZw8Arb334cUbwc,8
+mimical-0.0.4.dist-info/RECORD,,

mimical-0.0.2.dist-info/RECORD

@@ -1,12 +0,0 @@
-mimical/__init__.py,sha256=jPAlI6xX4U07RG_3_BUtr34CN_jQmzuqgduf2QpCAhE,74
-mimical/fitting/__init__.py,sha256=AVsW3xF_8s267G2EZAO7mqrr99Vdg8_AIIBwJkouvoY,68
-mimical/fitting/fitter.py,sha256=QDI0piD7BIpXoP9vrdy5d-kHa8KCgYywfOyKvtAoW0E,7680
-mimical/fitting/prior_handler.py,sha256=yXvxbohS6f94CMRyeIViFc83hRYAj82IZNA5mzhMSRw,4193
-mimical/plotting/__init__.py,sha256=I1ZpQA48g-YPkqwrDGgTrqaTxDUgR8n0mbBX0MdbZtU,30
-mimical/plotting/plotting.py,sha256=OWTR-uOT4UpBw0XcKpl_uFSODuEdcfw7nIk3Sf1cOGY,2646
-mimical/utils/__init__.py,sha256=yolMgYFpvXoHuyV-ijGo26SQ0_niw0gz__iAFgdiQiY,35
-mimical/utils/filter_set.py,sha256=EITLa2c3FG3n1-v7KatKRwHCRyfZ4TTjsi_WM7Bz64k,6819
-mimical-0.0.2.dist-info/METADATA,sha256=2ZASBP2XSlBeFOtpUdmxwdKtmebyGMlFqkX7DJQnbEE,832
-mimical-0.0.2.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-mimical-0.0.2.dist-info/top_level.txt,sha256=z6HTYpsoNjLUFayXjn8WyjX8C1mIbZw8Arb334cUbwc,8
-mimical-0.0.2.dist-info/RECORD,,