microlens-submit 0.12.1__py3-none-any.whl

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+ Metadata-Version: 2.4
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+ Name: microlens-submit
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+ Version: 0.12.1
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+ Summary: A stateful submission toolkit for the Microlensing Data Challenge.
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+ Author-email: Amber Malpas <malpas.1@osu.edu>
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+ License: MIT
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+ Project-URL: Homepage, https://github.com/AmberLee2427/microlens-submit
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+ Project-URL: Repository, https://github.com/AmberLee2427/microlens-submit
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: Operating System :: OS Independent
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+ Classifier: Development Status :: 3 - Alpha
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+ Classifier: Intended Audience :: Science/Research
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+ Classifier: Topic :: Scientific/Engineering :: Astronomy
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+ Requires-Python: >=3.8
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: typer[all]>=0.9.0
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+ Requires-Dist: pydantic>=2.0
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+ Requires-Dist: rich>=13.0
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+ Requires-Dist: PyYAML>=6.0
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+ Requires-Dist: markdown>=3.0
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+ Provides-Extra: dev
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+ Requires-Dist: pytest; extra == "dev"
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+ Requires-Dist: pytest-cov; extra == "dev"
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+ Requires-Dist: build; extra == "dev"
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+ Requires-Dist: twine; extra == "dev"
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+ Requires-Dist: pre-commit; extra == "dev"
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+ Requires-Dist: black; extra == "dev"
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+ Requires-Dist: isort; extra == "dev"
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+ Requires-Dist: sphinx; extra == "dev"
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+ Requires-Dist: sphinx_rtd_theme; extra == "dev"
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+ Dynamic: license-file
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+
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+ <p align="center">
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+ <a href="https://github.com/AmberLee2427/microlens-submit">
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+ <img src="./microlens_submit/assets/rges-pit_logo.png" alt="logo" width="300"/>
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+ </a>
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+ </p>
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+
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+ <h1 align="center">microlens-submit</h1>
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+
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+ *A stateful submission toolkit for the RGES-PIT Microlensing Data Challenge.*
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+
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+ [![PyPI - v0.12.1](https://img.shields.io/pypi/v/microlens-submit.svg)](https://pypi.org/project/microlens-submit/)
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+ [![CI](https://github.com/AmberLee2427/microlens-submit/actions/workflows/ci.yml/badge.svg)](https://github.com/AmberLee2427/microlens-submit/actions/workflows/ci.yml)
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+ [![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
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+
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+ <br>
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+
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+ `microlens-submit` provides a robust, version-controlled workflow for managing, validating, and packaging your challenge submission over a long period. It supports both a programmatic Python API and a full-featured Command Line Interface (CLI) for language-agnostic use.
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+
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+ Full documentation is hosted on [Read the Docs](https://microlens-submit.readthedocs.io/en/latest/). A comprehensive tutorial notebook is available at `docs/Submission_Tool_Tutorial.ipynb`. Challenge participants who prefer not to use this tool can consult [SUBMISSION_MANUAL.md](SUBMISSION_MANUAL.md) for the manual submission format.
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+
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+ ## Key Features
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+
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+ * **Persistent Projects:** Treat your submission as a local project that you can load, edit, and save over weeks or months.
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+ * **Python API & CLI:** Use the tool directly in your Python analysis scripts or via the command line.
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+ * **Solution Management:** Easily add, update, and deactivate degenerate solutions for any event without losing your work history.
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+ * **Active Solution Control:** Quickly list just the active solutions or mark
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+ all solutions inactive in one call.
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+ * **Automatic Validation:** Aggressive data validation powered by Pydantic ensures your submission is always compliant with the challenge rules.
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+ * **Parameter Validation:** Centralized validation logic checks parameter completeness, types, and physical consistency based on model type and higher-order effects.
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+ * **Rich Documentation:** Notes field supports Markdown formatting for creating detailed, structured documentation and submission dossiers.
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+ * **Environment Capture:** Automatically records your Python dependencies for each specific model fit, ensuring reproducibility.
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+ * **Optional Posterior Storage:** Record the path to posterior samples for any solution.
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+ * **Simple Export:** Packages all your active solutions into a clean, standardized `.zip` archive for final submission.
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+
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+ ## Installation
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+
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+ This package is pre-release. It is currently available on TestPyPI:
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+
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+ ```bash
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+ pip install -i https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple microlens-submit==0.12.0-dev
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+ ```
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+
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+ The package will be available on PyPI:
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+
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+ ```bash
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+ pip install microlens-submit
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+ ```
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+
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+ ### Quickstart Using the Command Line Interface (CLI)
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+
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+ The CLI is the recommended way to interact with your submission project.
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+
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+ You can pass ``--no-color`` to any command if your terminal does not support ANSI colors.
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+
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+ 1. Initialize your project: `microlens-submit init --team-name "Planet Pounders" --tier "advanced"`
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+ 2. Add a new solution to an event:
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+ ```bash
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+ microlens-submit add-solution ogle-2025-blg-0042 1S2L \
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+ --param t0=555.5 \
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+ --param u0=0.1 \
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+ --param tE=25.0 \
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+ --notes "This is a great fit!"
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+ ```
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+ Model types must be one of `1S1L`, `1S2L`, `2S1L`, `2S2L`, `1S3L`, `2S3L`, or `other`.
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+ This will create a new solution and print its unique `solution_id`.
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+ You can run the same command with `--dry-run` first to verify the
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+ parsed input without saving anything.
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+ 3. Deactivate a solution that didn't work out: `microlens-submit deactivate <solution_id>`
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+ 4. List all solutions for an event: `microlens-submit list-solutions ogle-2025-blg-0042`
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+ 5. Validate solutions and check for issues: `microlens-submit validate-solution <solution_id>`
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+ 6. Export your final submission: `microlens-submit export final_submission.zip`
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+
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+ **Note:** When you add a solution, it's automatically validated and any warnings are displayed. Use `--dry-run` to check validation without saving.
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+
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+ ### Using the Python API
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+
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+ For those who want to integrate the tool directly into their Python analysis pipeline.
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+
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+ ```python
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+ import microlens_submit
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+
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+ # Load or create the project
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+ sub = microlens_submit.load(project_path="./my_challenge_submission")
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+ sub.team_name = "Planet Pounders"
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+ sub.tier = "advanced"
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+
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+ # Get an event and add a solution
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+ evt = sub.get_event("ogle-2025-blg-0042")
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+ params = {"t0": 555.5, "u0": 0.1, "tE": 25.0}
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+ sol = evt.add_solution(model_type="1S2L", parameters=params)
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+
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+ # Record compute info for this specific run
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+ sol.set_compute_info(cpu_hours=15.5)
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+ sol.notes = "This fit was generated from our Python script."
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+
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+ # Save progress to disk
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+ sub.save()
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+
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+ # When ready, export the final package
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+ sub.export("final_submission.zip")
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+ ```
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+
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+ ## Development
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+
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+ The full development plan can be found in agents.md. Contributions are welcome!
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+
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+ To build and test this project, the development environment needs the following Python libraries. You can provide these to Codex or set up a `requirements-dev.txt` file.
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+
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+ ### Core Dependencies:
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+ * **`typer[all]`**: For building the powerful command-line interface. The `[all]` extra ensures shell completion support is included.
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+ * **`pydantic`**: For aggressive data validation and settings management.
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+
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+ ### Testing Dependencies:
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+ * **`pytest`**: The standard framework for testing Python code.
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+ * **`pytest-cov`**: To measure test coverage.
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+
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+ ### Packaging & Distribution Dependencies:
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+ * **`build`**: For building the package from the `pyproject.toml` file.
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+ * **`twine`**: For uploading the final package to PyPI.
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+
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+ ## Citation
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+
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+ If you use **microlens-submit** in your research, please cite the project using
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+ the metadata provided in the `CITATION.cff` file. Most reference managers can
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+ import this file directly.
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+
@@ -0,0 +1,13 @@
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+ microlens_submit/__init__.py,sha256=hBD9NA-AbajbMaVGS8_5xNvvWsLGBON0bXIK3kDK-jA,5869
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+ microlens_submit/api.py,sha256=p_EqHPBA7kkOMa1GzPj1_fTy4J63uyzkI41l1O3_IlA,53885
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+ microlens_submit/cli.py,sha256=SpO3d8v2_SswFNZFDkNQ4K0Oj-EXkDYmR5309123D6o,78718
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+ microlens_submit/dossier.py,sha256=tvWSh0JaSrPK5O7c_xULDkKNxCxBnUfaUgm9dFMUsrA,65415
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+ microlens_submit/validate_parameters.py,sha256=GNma6rIl_VompJ7eyGJnT3nQ0v_PFJW1pZVBqVj5UTA,30767
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+ microlens_submit/assets/github-desktop_logo.png,sha256=pb4rallKrYQPHt6eC0TmJe_UyyMtf1IrP8_OWK19nH8,479821
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+ microlens_submit/assets/rges-pit_logo.png,sha256=45AJypXCymvt3lMeK7MHt1SBhwPpnKCMj6S000Cejtc,537645
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+ microlens_submit-0.12.1.dist-info/licenses/LICENSE,sha256=cy1qkVR-kGxD6FXVsparmU2vHJXYeoyAAHv6SgT67sw,1069
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+ microlens_submit-0.12.1.dist-info/METADATA,sha256=qoO8paDd7MhdTpuJNbPI09i8Ij20RUlee27me7if5Uc,7177
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+ microlens_submit-0.12.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ microlens_submit-0.12.1.dist-info/entry_points.txt,sha256=kA85yhxYrpQnUvVZCRS2giz52gaf1ZOfZFjY4RHIZ2s,62
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+ microlens_submit-0.12.1.dist-info/top_level.txt,sha256=uJ9_bADYRySlhEpP-8vTm90ZLV2SrKEzutAaRx8WF0k,17
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+ microlens_submit-0.12.1.dist-info/RECORD,,
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+ Wheel-Version: 1.0
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+ Generator: setuptools (80.9.0)
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+ Root-Is-Purelib: true
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+ Tag: py3-none-any
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+
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+ [console_scripts]
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+ microlens-submit = microlens_submit.cli:app
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+ MIT License
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+
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+ Copyright (c) 2025 Amber Malpas
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
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+ microlens_submit