mgnify-pipelines-toolkit 1.2.10__py3-none-any.whl → 1.2.11__py3-none-any.whl

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Files changed (7) hide show
  1. mgnify_pipelines_toolkit/analysis/amplicon/primer_val_classification.py +2 -1
  2. {mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/METADATA +1 -1
  3. {mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/RECORD +7 -7
  4. {mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/WHEEL +0 -0
  5. {mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/entry_points.txt +0 -0
  6. {mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/licenses/LICENSE +0 -0
  7. {mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/top_level.txt +0 -0
mgnify_pipelines_toolkit/analysis/amplicon/primer_val_classification.py CHANGED
@@ -167,7 +167,8 @@ def main():
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  matched_primers_list.append(cleaned_primer_name)
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  res_df = pd.DataFrame.from_dict(res_dict)
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- res_df.to_csv(f"./{sample}_primer_validation.tsv", sep="\t", index=False)
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+ res_tsv_name = f"./{sample}_primer_validation.tsv"
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+ res_df.to_csv(res_tsv_name, sep="\t", index=False) if not res_df.empty else open(res_tsv_name, "w").close()
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  fwd_primers_fw.close()
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  rev_primers_fw.close()
{mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: mgnify_pipelines_toolkit
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- Version: 1.2.10
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+ Version: 1.2.11
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  Summary: Collection of scripts and tools for MGnify pipelines
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  Author-email: MGnify team <metagenomics-help@ebi.ac.uk>
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  License: Apache Software License 2.0
{mgnify_pipelines_toolkit-1.2.10.dist-info → mgnify_pipelines_toolkit-1.2.11.dist-info}/RECORD RENAMED
@@ -4,7 +4,7 @@ mgnify_pipelines_toolkit/analysis/amplicon/classify_var_regions.py,sha256=8yFhmH
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  mgnify_pipelines_toolkit/analysis/amplicon/make_asv_count_table.py,sha256=-g1FDwdEndWH9VvYLmc_NEs2l204kKjMHk65wag8T_s,8891
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  mgnify_pipelines_toolkit/analysis/amplicon/mapseq_to_asv_table.py,sha256=BLqhflblUegCvuQic16PrFXfIXlFWmGkmWJyl4wJoLQ,5040
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  mgnify_pipelines_toolkit/analysis/amplicon/permute_primers.py,sha256=1aGOJX9tC7M1rnd0U2PeJ681sUo02wxk7_ycJqeVt6s,2216
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- mgnify_pipelines_toolkit/analysis/amplicon/primer_val_classification.py,sha256=-W_QmdmKAIqVC5n-RS8LX11hEQM4xdp5r1jkITB1CI8,5256
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+ mgnify_pipelines_toolkit/analysis/amplicon/primer_val_classification.py,sha256=uGlQ0595rammsW-rnhh1UAEkoRUjLqCQ-tp377Mj180,5345
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  mgnify_pipelines_toolkit/analysis/amplicon/remove_ambiguous_reads.py,sha256=Wu4tRtuRkgd3hoeuwPl_E5ghxIW7e_1vrcvFGWv_U4A,3173
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  mgnify_pipelines_toolkit/analysis/amplicon/rev_comp_se_primers.py,sha256=yLpzkRJXAeXRUNgz60zopEwHcdprM2UDjquE-GkrFys,1722
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  mgnify_pipelines_toolkit/analysis/amplicon/study_summary_generator.py,sha256=epVClL10QcllL8yu7YGjx0rXNVHL2GxHi-Ek0MOjsjo,13859
@@ -44,9 +44,9 @@ mgnify_pipelines_toolkit/schemas/schemas.py,sha256=0l1hOkF4AeN0YOm4CVGPoP-U8kEzA
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  mgnify_pipelines_toolkit/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  mgnify_pipelines_toolkit/utils/fasta_to_delimited.py,sha256=lgYIR1S4crURY7C7nFtgE6QMV4u4zCNsUrVkcRnsEEo,3996
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  mgnify_pipelines_toolkit/utils/get_mpt_version.py,sha256=aS9bWrC9CP7tpxoEVg6eEYt18-pmjG7fJl5Mchz4YOU,798
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- mgnify_pipelines_toolkit-1.2.10.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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- mgnify_pipelines_toolkit-1.2.10.dist-info/METADATA,sha256=n5tDivtztPRym64VcuVJNREtbj8k_ODWYB1xXVjmgFk,5776
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- mgnify_pipelines_toolkit-1.2.10.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- mgnify_pipelines_toolkit-1.2.10.dist-info/entry_points.txt,sha256=7TJ8GgbKoX1xnQsOdWwMvwhIv4uuHCx7pMxKmZabPOs,3228
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- mgnify_pipelines_toolkit-1.2.10.dist-info/top_level.txt,sha256=xA_wC7C01V3VwuDnqwRM2QYeJJ45WtvF6LVav4tYxuE,25
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- mgnify_pipelines_toolkit-1.2.10.dist-info/RECORD,,
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+ mgnify_pipelines_toolkit-1.2.11.dist-info/licenses/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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+ mgnify_pipelines_toolkit-1.2.11.dist-info/METADATA,sha256=xziE8NaQ8tsUlY9JTEOX4Sf5KO4xnzD2hRL-nvHFryw,5776
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+ mgnify_pipelines_toolkit-1.2.11.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ mgnify_pipelines_toolkit-1.2.11.dist-info/entry_points.txt,sha256=7TJ8GgbKoX1xnQsOdWwMvwhIv4uuHCx7pMxKmZabPOs,3228
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+ mgnify_pipelines_toolkit-1.2.11.dist-info/top_level.txt,sha256=xA_wC7C01V3VwuDnqwRM2QYeJJ45WtvF6LVav4tYxuE,25
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+ mgnify_pipelines_toolkit-1.2.11.dist-info/RECORD,,