metameq 2026.2.1__py3-none-any.whl → 2026.2.3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (13) hide show
  1. metameq/__init__.py +3 -2
  2. metameq/_version.py +3 -3
  3. metameq/src/metadata_configurator.py +53 -6
  4. metameq/src/metadata_extender.py +16 -38
  5. metameq/src/util.py +7 -0
  6. metameq/tests/test_metadata_configurator.py +184 -1
  7. metameq/tests/test_metadata_extender.py +306 -117
  8. metameq/tests/test_metadata_validator.py +2 -2
  9. {metameq-2026.2.1.dist-info → metameq-2026.2.3.dist-info}/METADATA +2 -1
  10. {metameq-2026.2.1.dist-info → metameq-2026.2.3.dist-info}/RECORD +13 -13
  11. {metameq-2026.2.1.dist-info → metameq-2026.2.3.dist-info}/WHEEL +0 -0
  12. {metameq-2026.2.1.dist-info → metameq-2026.2.3.dist-info}/entry_points.txt +0 -0
  13. {metameq-2026.2.1.dist-info → metameq-2026.2.3.dist-info}/top_level.txt +0 -0
metameq/tests/test_metadata_validator.py CHANGED
@@ -547,7 +547,7 @@ class TestOutputValidationMsgs(TestCase):
547
547
  output_files = glob.glob(os.path.join(tmp_dir, "*_test_validation_errors.txt"))
548
548
  self.assertEqual(1, len(output_files))
549
549
 
550
- result_df = pd.read_csv(output_files[0], sep="\t")
550
+ result_df = pd.read_csv(output_files[0], sep="\t", dtype=str, keep_default_na=False)
551
551
  pd.testing.assert_frame_equal(validation_msgs_df, result_df)
552
552
 
553
553
  def test_output_validation_msgs_non_empty_df_comma_separator(self):
@@ -564,7 +564,7 @@ class TestOutputValidationMsgs(TestCase):
564
564
  output_files = glob.glob(os.path.join(tmp_dir, "*_test_validation_errors.csv"))
565
565
  self.assertEqual(1, len(output_files))
566
566
 
567
- result_df = pd.read_csv(output_files[0], sep=",")
567
+ result_df = pd.read_csv(output_files[0], sep=",", dtype=str, keep_default_na=False)
568
568
  pd.testing.assert_frame_equal(validation_msgs_df, result_df)
569
569
 
570
570
  def test_output_validation_msgs_empty_df_creates_empty_file(self):
{metameq-2026.2.1.dist-info → metameq-2026.2.3.dist-info}/METADATA RENAMED
@@ -1,12 +1,13 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: metameq
3
- Version: 2026.2.1
3
+ Version: 2026.2.3
4
4
  Summary: Qiita-compliant metadata generation and validation tool
5
5
  Home-page: https://github.com/AmandaBirmingham/metameq
6
6
  Author: Amanda Birmingham
7
7
  Author-email: abirmingham@ucsd.edu
8
8
  License: BSD-3-Clause
9
9
  Requires-Dist: click>=8.0.0
10
+ Requires-Dist: openpyxl>=3.0.0
10
11
  Requires-Dist: pandas>=1.3.0
11
12
  Requires-Dist: PyYAML>=5.4.0
12
13
  Requires-Dist: Cerberus>=1.3.4
{metameq-2026.2.1.dist-info → metameq-2026.2.3.dist-info}/RECORD RENAMED
@@ -1,27 +1,27 @@
1
- metameq/__init__.py,sha256=6mwG4ULHzMyPm5V16BSJwTMBsqsugFe2yRp5oA-IVHo,2461
2
- metameq/_version.py,sha256=CWCggc3pJMv268vpQwqYr3laum4cOXHQPgqjMq3Mbxw,501
1
+ metameq/__init__.py,sha256=dVrU6yGy56wwS16aQiTrYReLhQ_PAArTXwG6A6bruuo,2514
2
+ metameq/_version.py,sha256=3cTIzSMcfLehKQ6hjOGs6fjPF0WInVIw-NKaK-rs954,501
3
3
  metameq/config/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
4
4
  metameq/config/config.yml,sha256=63tBG-SeNdysvRc9DNofqitvTPWtUCT1FbTdrn3KpBs,183
5
5
  metameq/config/standards.yml,sha256=tY3G4jL0GlxcpW8I6xoOmzdtoH6Pn5hZ_9BR_tL9lxo,73783
6
6
  metameq/src/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
7
7
  metameq/src/__main__.py,sha256=KJtslcriLKqYA9FcFH02i8TXMsCeB-14b8L9SBP18qw,1379
8
- metameq/src/metadata_configurator.py,sha256=tPTODu4y-Oe1uMNOQ86BYsPjNnc66iNfF2EiM9hQCAE,28176
9
- metameq/src/metadata_extender.py,sha256=FvathKmnDDf5Ax68dKTaLzh93a8L_TkH0uHhA6ClmKM,50256
8
+ metameq/src/metadata_configurator.py,sha256=qfmY6I0M-BChGq2wIejoprs7gds2zGP6sYSEMN35ANo,30178
9
+ metameq/src/metadata_extender.py,sha256=K74RlnZpg_Hb3hMm2S1vmGc36LwaDA2yV-2aM1D7f3c,48680
10
10
  metameq/src/metadata_merger.py,sha256=aZo3NdYAsbz34rjLEZXvRRCtFm25p8BUNW79kW9y55Y,13067
11
11
  metameq/src/metadata_transformers.py,sha256=kBGB2zbyRTpu-M9nIZBGhlCIDnWxnPPZPylfvxfX5YU,9354
12
12
  metameq/src/metadata_validator.py,sha256=pvyPACr4epJv9zkJdS6bS0JzRXTPj6rxVl_n8p0RQxs,14351
13
- metameq/src/util.py,sha256=8tPBLedQRedaD9Ddbh3rgYKgs6voeVGuUeFBsD_h2SU,9068
13
+ metameq/src/util.py,sha256=G5wcrn_PoYIGaRRsQKFQ0aHv8kImqCRJtXjmF_EXHBY,9172
14
14
  metameq/tests/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
15
- metameq/tests/test_metadata_configurator.py,sha256=yVDgOUsQyOsoXUFJUq32CUZvE5fSFV742AGA8b3TdEY,208478
16
- metameq/tests/test_metadata_extender.py,sha256=Q4bfcnAPfLioqexmKy0Nu3CsJG6tp3nRjE5lMKTykKM,179546
15
+ metameq/tests/test_metadata_configurator.py,sha256=STHmM8qZmH8v4dt-W1hVwV92RQIb_iSiOB8UDXWtZiY,215609
16
+ metameq/tests/test_metadata_extender.py,sha256=vgxWMc3Hmx4-hzupnuYdVPxqbPNn-hWcZFsdctnALYo,189386
17
17
  metameq/tests/test_metadata_merger.py,sha256=U1FqGhkZVSyeX37kSk4QpD0N9HzWGcpsCR38Xc0Lz-g,22992
18
18
  metameq/tests/test_metadata_transformers.py,sha256=O80Qzka_7CeyMZz5RO8YQ-AR12sK64ArevWbkt7NVZU,11857
19
- metameq/tests/test_metadata_validator.py,sha256=Ux9EDsmYJdUFeKKey4QstnW3sgWKFuNneFyYZ8dWPHc,39814
19
+ metameq/tests/test_metadata_validator.py,sha256=VDcZsIxjP4SJ1u44DxF3q2PPX_oqEpdAIuh9dUulBrI,39882
20
20
  metameq/tests/test_util.py,sha256=x26gcYxNDPCPS7OPKftEcl-ezFnka-pyMA-SVSMK_dQ,17161
21
21
  metameq/tests/data/invalid.yml,sha256=ZjyPB2QELgjhhTx8lHgaVXWoIIbfmU_YcMxebHWda78,27
22
22
  metameq/tests/data/test_config.yml,sha256=KKvu_ILmcN7822r1BwWQ9s14AW6vVSePmjmoSx8B1zM,180
23
- metameq-2026.2.1.dist-info/METADATA,sha256=w9eJP5RAZJJBS65vU_nXMFv3wU1gU1Chu26Cl6Now6g,658
24
- metameq-2026.2.1.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
25
- metameq-2026.2.1.dist-info/entry_points.txt,sha256=DJsXx2sh4afJZw4KGcYrz9v4L86LrMKrJYYuDRV7edQ,54
26
- metameq-2026.2.1.dist-info/top_level.txt,sha256=UKD6LtyBhlRDgKBfaPUuQGp_ekTsmOXucSwuDoUO1Fw,8
27
- metameq-2026.2.1.dist-info/RECORD,,
23
+ metameq-2026.2.3.dist-info/METADATA,sha256=mLBzOxqxL7MJ52TUG0VrJ6XPbFCVZumXui0mS-d3j84,689
24
+ metameq-2026.2.3.dist-info/WHEEL,sha256=wUyA8OaulRlbfwMtmQsvNngGrxQHAvkKcvRmdizlJi0,92
25
+ metameq-2026.2.3.dist-info/entry_points.txt,sha256=DJsXx2sh4afJZw4KGcYrz9v4L86LrMKrJYYuDRV7edQ,54
26
+ metameq-2026.2.3.dist-info/top_level.txt,sha256=UKD6LtyBhlRDgKBfaPUuQGp_ekTsmOXucSwuDoUO1Fw,8
27
+ metameq-2026.2.3.dist-info/RECORD,,